TCONS_00009660 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009660
Unique NameTCONS_00009660
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length208

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009660 ID=TCONS_00009660|Name=TCONS_00009660|organism=Clytia hemisphaerica|type=transcript|length=208bp
CAGGACAACATCTTCAGTGTCTGTCTCTAATAATTCTGTTGGTCTGTCTT
GACTTGGGATAGATGGTGCAGCATCTTTagtgacttttttctttttcctt
ttattaTCACCGTCACTGTCACTTGGGATTGTGTTAGGTTGACAAGCATG
ACAAATGTAGAACATGCCAGGTAGATTTAGAGGGTTATACAGGCTTTTGA
AGAGATCA
Run BLAST on NCBI

transcript from alignment at sc0000097:227066..227273

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009660 ID=TCONS_00009660|Name=TCONS_00009660|organism=Clytia hemisphaerica|type=transcript|length=208bp|location=Sequence derived from alignment at sc0000097:227066..227273 (Clytia hemisphaerica)
TGATCTCTTCAAAAGCCTGTATAACCCTCTAAATCTACCTGGCATGTTCT
ACATTTGTCATGCTTGTCAACCTAACACAATCCCAAGTGACAGTGACGGT
GAtaataaaaggaaaaagaaaaaagtcactAAAGATGCTGCACCATCTAT
CCCAAGTCAAGACAGACCAACAGAATTATTAGAGACAGACACTGAAGATG
TTGTCCTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005396XLOC_005396Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009660-exon-sc0000097-1491911889:227066..227273TCONS_00009660-exon-sc0000097-1491911889:227066..227273Clytia hemisphaericaexon
TCONS_00009660-exon-sc0000097-1510915933:227066..227273TCONS_00009660-exon-sc0000097-1510915933:227066..227273Clytia hemisphaericaexon
TCONS_00009660-exon-sc0000097-1575043694:227066..227273TCONS_00009660-exon-sc0000097-1575043694:227066..227273Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000097supercontigsc0000097:227066..227273 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00009660 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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