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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00009691 ID=TCONS_00009691|Name=TCONS_00009691|organism=Clytia hemisphaerica|type=transcript|length=1386bp
CGAATGGTTCCATTTgtggacaaaatattttattgcttTCAATCGGAACA
TAGAAATGGATTTGGCCGGACACTCGCTCACTCGCCATACCGCAAAACTT
ATGGATATTTTTTCTGGTACATTGGACTGGCAGTGGTaatgaaaaacatt
tatttTCCAAATAAATGGGGAATTTCGGAAGGACGAACGTTATTTTGAAT
TATCAGGGATAACAAATTCTTTGTTTATgaggtttgttttgttttctaaa
aaccaaaacaaataaatatttttacatcgcaatttttgaaaattggaaaa
atgaaaagtaatataaaatatctaaaatggTGTTGTGATTGtcataaaat
aatttgaaatggtCTAActagaagaaaaagaaagatNTTTTTCTTGTACA
TTGGGCTGGCAGTGGTaatgaaaaacatttattttccaaataaaatggGG
AATTTTGGAAGGACGAACGTTATTTTGAATTATCAGGgataacaattttt
ttgtttatgaggtttgttttgttttcaaaaaaccaaaacaaatattttta
catcgcaatttttgaaaattggaaaaaatgaaaagtaatataaaatatct
aaaatggTGTTGTGATTGtcataaaataatttgaaatggtCTAGCtagaa
ggaaaagaaaagagagTTGTTCAAAAGTGATCGAAAGCTTGAATACAGAA
AATATGAGAGGAAAAGGTTTGCGAACTGAGACTGAAAAAAAGCGCCGAAA
GAAGAGAGATTGAAGAGAGAGATGGAGATTTTGCTCAACTTAAAAATTCT
AATCAATGAAATAACTAAAATAAATTCACAATGTAAATCTAGCTTTATAA
AAACCGTCTATGATAATGGGCGGTGGGCGTCATTTACCATCTACCACTAT
TTTGTCGTGGGCGGTTATATCTCTTATCAACAACACGGTCGAAATTCTCA
ATGGTCCATTGAGAAGCGTacgttttgaaatatttttcgcaCGATGCTTC
AACGTAGAACGTCGATGGGATGCGGTCACGGTGATCAGAATCGCCCTGGA
TTCGGATGCTGTTAATTTTGACGGGGTTTTGGAATTCGTAAGCGATCCAG
TTCAACCCTTTACTGGAGATACCATTTGGCGCCCAAACTGATTCTGGATT
GTTGTCGAAAGCGTTGCTTGGTGAATATCCTGCACGGAGAAATACAATTA
GGGAAGGTATGCTTTTTTAGATTTACAAAGTTCTTTCGTCTTCGATGGAT
TTTCATCTCAGCGAGTTATATAAAGAGGCTTTTCTGTCTGAAAATTCAAC
AAAACTCAGCAAAATTTCTGATGAATCTTGCCTAAATACAATGATGGAAG
GAATTGATCTGTTATAAATTTAAACTCACTTTTGAA Run BLAST on NCBI transcript from alignment at sc0000098:78366..79751+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00009691 ID=TCONS_00009691|Name=TCONS_00009691|organism=Clytia hemisphaerica|type=transcript|length=1386bp|location=Sequence derived from alignment at sc0000098:78366..79751+ (Clytia hemisphaerica)
CGAATGGTTCCATTTgtggacaaaatattttattgcttTCAATCGGAACA
TAGAAATGGATTTGGCCGGACACTCGCTCACTCGCCATACCGCAAAACTT
ATGGATATTTTTTCTGGTACATTGGACTGGCAGTGGTaatgaaaaacatt
tatttTCCAAATAAATGGGGAATTTCGGAAGGACGAACGTTATTTTGAAT
TATCAGGGATAACAAATTCTTTGTTTATgaggtttgttttgttttctaaa
aaccaaaacaaataaatatttttacatcgcaatttttgaaaattggaaaa
atgaaaagtaatataaaatatctaaaatggTGTTGTGATTGtcataaaat
aatttgaaatggtCTAActagaagaaaaagaaagatNTTTTTCTTGTACA
TTGGGCTGGCAGTGGTaatgaaaaacatttattttccaaataaaatggGG
AATTTTGGAAGGACGAACGTTATTTTGAATTATCAGGgataacaattttt
ttgtttatgaggtttgttttgttttcaaaaaaccaaaacaaatattttta
catcgcaatttttgaaaattggaaaaaatgaaaagtaatataaaatatct
aaaatggTGTTGTGATTGtcataaaataatttgaaatggtCTAGCtagaa
ggaaaagaaaagagagTTGTTCAAAAGTGATCGAAAGCTTGAATACAGAA
AATATGAGAGGAAAAGGTTTGCGAACTGAGACTGAAAAAAAGCGCCGAAA
GAAGAGAGATTGAAGAGAGAGATGGAGATTTTGCTCAACTTAAAAATTCT
AATCAATGAAATAACTAAAATAAATTCACAATGTAAATCTAGCTTTATAA
AAACCGTCTATGATAATGGGCGGTGGGCGTCATTTACCATCTACCACTAT
TTTGTCGTGGGCGGTTATATCTCTTATCAACAACACGGTCGAAATTCTCA
ATGGTCCATTGAGAAGCGTacgttttgaaatatttttcgcaCGATGCTTC
AACGTAGAACGTCGATGGGATGCGGTCACGGTGATCAGAATCGCCCTGGA
TTCGGATGCTGTTAATTTTGACGGGGTTTTGGAATTCGTAAGCGATCCAG
TTCAACCCTTTACTGGAGATACCATTTGGCGCCCAAACTGATTCTGGATT
GTTGTCGAAAGCGTTGCTTGGTGAATATCCTGCACGGAGAAATACAATTA
GGGAAGGTATGCTTTTTTAGATTTACAAAGTTCTTTCGTCTTCGATGGAT
TTTCATCTCAGCGAGTTATATAAAGAGGCTTTTCTGTCTGAAAATTCAAC
AAAACTCAGCAAAATTTCTGATGAATCTTGCCTAAATACAATGATGGAAG
GAATTGATCTGTTATAAATTTAAACTCACTTTTGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00009691-exon-sc0000098-1491911889:78366..79751 | TCONS_00009691-exon-sc0000098-1491911889:78366..79751 | Clytia hemisphaerica | exon |
| TCONS_00009691-exon-sc0000098-1510915933:78366..79751 | TCONS_00009691-exon-sc0000098-1510915933:78366..79751 | Clytia hemisphaerica | exon |
| TCONS_00009691-exon-sc0000098-1575043694:78366..79751 | TCONS_00009691-exon-sc0000098-1575043694:78366..79751 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000098 | supercontig | sc0000098:78366..79751 + |
Blast
The following BLAST results are available for this feature:
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