|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00009714 ID=TCONS_00009714|Name=TCONS_00009714|organism=Clytia hemisphaerica|type=transcript|length=912bp
aaaagaaccGAAATTTAAACGAATTATAAAAATGcataattaaaattttc
taaaattttacaaaaaatgagaATGTTTACATacgtaaaaagaaaaaata
agtttagaGCGGTTTAGATAAAAATGAAAGGTGGATTGTTTCCTGGGTTA
ATCTCATAGGTTCAGGTTCAAACTTGATTTCAAGTGAGACGGCGCAAAAA
ATCCCCTAAATTCAAAAGTATGATGTTTCAATCAAAGTTTAAACGATTCA
AAtaatatcaaagaaaaaaaatataattgttttccctaaaatattgtttg
aaatatattcataacaaaagttttttattttccaaaaatacatatatttt
cttatttatataatcgaattttgcataaattaaagaaatggatttaaatt
aaagaaatcgTCGACCTTGTTGATAGTTTTATGGTGTAAGGAAAAATATA
CGAATTGCAGTCTGTAAAAACACAGAAGATGTCTTAGATCGACCTGAGAG
AACAGCACATGGAAGTTGATAAAATCTTCCAATTCTTCATAACAGAATTT
AAATGTGTAGTTTCATTACAGACAGAAAAAAGCGTTTAAATGATTTCAAC
AATTAGTACTAGCTTGTGCACGGATGCGCTCAAAGATAGCATATTCCTCG
GCTGATAAATCACAACTTTTGAATGGGCCATCCATCATCCCACATAAGAA
GCTTCGTCGGCATTTCAACGTGTCACATGTATCATATTTGTATTGTTTTC
GGTATGCCCTGCAAAAGATAGAATATAAAACTAGGTCAGTGTAGAAATCA
CAATGGAACAACCGCCGGCAAAAAAATTACCGTAGCAACGCTACCATTTT
AAATAGATAAGACTTgattattcattttgaaatgaaaatatgtatacggT
GAGTACTAAATT Run BLAST on NCBI transcript from alignment at sc0000098:385792..386766+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00009714 ID=TCONS_00009714|Name=TCONS_00009714|organism=Clytia hemisphaerica|type=transcript|length=975bp|location=Sequence derived from alignment at sc0000098:385792..386766+ (Clytia hemisphaerica)
aaaagaaccGAAATTTAAACGAATTATAAAAATGcataattaaaattttc
taaaattttacaaaaaatgagaATGTTTACATacgtaaaaagaaaaaata
agtttagaGCGGTTTAGATAAAAATGAAAGGTGGATTGTTTCCTGGGTTA
ATCTCATAGGTTCAGGTTCAAACTTGATTTCAAGTGAGACGGCGCAAAAA
ATCCCCTAAATTCAAAAGTATGATGTTTCAATCAAAGTTTAAACGATTCA
AAtaatatcaaagaaaaaaaatataattgttttccctaaaatattgtttg
aaatatattcataacaaaagttttttattttccaaaaatacatatatttt
cttatttatataatcgaattttgcataaattaaagaaatggatttaaatt
aaagaaatcgTCGACCTTGTTGATAGTTTTATGGTGTAAGGAAAAATATA
CGAATTGCAGTCTGTAAAAACACAGAAGATGTCTTAGATCGACCTGAGAG
AACAGCACATGGAAGTTGATAAAATCTTCCAATTCTTCATAACAGAATTT
AAATGTGTAGTTTCATTACAGACAGAAAAAAGCGTTTAAATGATTTCAAC
AATTAGTACTAGCTTGTGCACGGATGCGCTCAAAGATAGCATATTCCTCG
GCTGATAAATCACAACTTTTGAATGGGCCATCCATCATCCCACATAAGAA
GCTTCGTCGGCATTTCAACGTGTCACATGTATCANATGGGCCATCCATCA
TCCCACACAGGAAACTTCGACGACATTTCAACGTGTCACATGTATCATAT
TTGTATTGTTTTCGGTATGCCCTGCAAAAGATAGAATATAAAACTAGGTC
AGTGTAGAAATCACAATGGAACAACCGCCGGCAAAAAAATTACCGTAGCA
ACGCTACCATTTTAAATAGATAAGACTTgattattcattttgaaatgaaa
atatgtatacggTGAGTACTAAATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00009714-exon-sc0000098-1491911889:385792..386502 | TCONS_00009714-exon-sc0000098-1491911889:385792..386502 | Clytia hemisphaerica | exon |
| TCONS_00009714-exon-sc0000098-1510915933:385792..386502 | TCONS_00009714-exon-sc0000098-1510915933:385792..386502 | Clytia hemisphaerica | exon |
| TCONS_00009714-exon-sc0000098-1575043694:385792..386502 | TCONS_00009714-exon-sc0000098-1575043694:385792..386502 | Clytia hemisphaerica | exon |
| TCONS_00009714-exon-sc0000098-1491911889:386566..386766 | TCONS_00009714-exon-sc0000098-1491911889:386566..386766 | Clytia hemisphaerica | exon |
| TCONS_00009714-exon-sc0000098-1510915933:386566..386766 | TCONS_00009714-exon-sc0000098-1510915933:386566..386766 | Clytia hemisphaerica | exon |
| TCONS_00009714-exon-sc0000098-1575043694:386566..386766 | TCONS_00009714-exon-sc0000098-1575043694:386566..386766 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000098 | supercontig | sc0000098:385792..386766 + |
Blast
The following BLAST results are available for this feature:
|
