TCONS_00009735 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009735
Unique NameTCONS_00009735
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1921

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009735 ID=TCONS_00009735|Name=TCONS_00009735|organism=Clytia hemisphaerica|type=transcript|length=1921bp
TTATAGTGAATAACATTCATAATGGCTGACAAAGCACAATTAGAAGTTGA
AAAAAAGGCAAAAGCAGCAGCAAAGGCTGAACGTAAGAAACAATACGAGG
CACAACAAGCTGAGAAGGCAAAACAACAGGGTGGAGACGCTgcaggaaaa
aaatcaaaagctgAGCTGAAAGCTGAACGACGAGCCAAGCAGGAAGCACA
GAGAGCTGCTAAAACAACTGGTGATAGCGCTAAAAGTGGGAAAAAGAGCC
TAGGTGACAATGTAGGGAAGAAGGGCCAAGGTGACAACTTAGGGAAGAAA
AAGCCACTAACAGAGAAGCAGTCAGAAAAATCACAACAACaagaatcaaa
aatcaaaaaacagcCTAGCTCTTCATCCATAACAAAGTCTCATGAACAAC
CTCGTGTCTCTTCCAATGTCCAGATGGACAGTGAGAAAGTCCAGAAAAAG
ATCACCAAAACGTTAGCCAAACAGAACGTTCCTCAACGCAGTGCAGCACA
AAAGAAAGTGCAAATGTTTGCACATTTACACCAATATGAGAAAGATCGTT
CACTAACAAAAAATCTGAGTTTTTCCTCATGCTCCATTCATCCAGCCATC
ATTAAACTTGGCTTACAATTCGCTGAAGGAATTATAACTGGCTCAAATGC
AAGATGTATTTCAATGTTGTGCGCTTTGAAAATGgtcATCAAAGATTACA
GCACACCACCACAGAAAGAACTCTCAAGAGATCTAGAATCAAAAATTAAA
CCCTGCATAAGCTTTTTGACGCAATGTCGGAACCTGTCTCAGAGTATGGG
AAACGCAATCAAGTATCTGAAACATCAAATCACAAACCTATCTCCTGAGT
TGCCGGAAGCAAAGGCGAAAGAACATTTGTTAGAAAGTATCGATAGTTTC
ATTCAAGAACGAATTATCCTTGCCGATCAACAAATTACTAATTTCGCAGT
TCAAAAAATTCACGACGGAAACAAAATATTAATTTACGGATTTTCTTCAC
TGATTATTAACATTTTGAAAGATGCGAAAGAATCGGGTAAAGAATTTGAA
GTGGTCGTTGTGGATTGTAGACCAGATTTCCCCGGTCGTGAGACGTTGAA
AAGGTTGGAAGACGCAGAAATCAAATGTTCATACACCCTCCTCAATAATA
TCTCATACATCATCAAAGAGGTGACGACTGTTTTTCTTGGAACCCACGCG
TTGCTTGCCAACGGCAATGTCATGGCTAAAGCTGGAACTTCTATGGTTGC
CATGgtagccaaatcgaacaatgtACCTGTCTTGGTGTGTTGTGAAACGT
ACAAATTTTGTGAACGAGCTCAAAGTGATTCTTTTGTCTTCAATGAATTG
GGCGATCCAGACGATTTGGTGTCTTTACACAGACCTCACTCACAAGACAT
TCTAACAAACTGGAGAGACATTAAATCCTTATATTTGCTGAATTTGGTTT
ACGATGTGACGCCATCTTCTTTTGTTGATATGGTTGTCACGGAGATTGGA
ATGATTCCTTGCACTTCGGTACCGGTAGTTTTAAGAGTCAAAAACACTAA
TGATGGTATCGCTACGTAATGTTTATGATTTCAAAATGTTAGAAtattat
agatttttttttggaattgaattGCTGGAActcgcttgaaaaatcaaatt
gttCTTTGACTATAAAGAGCGATCGACGAATGTCTACACAGATATCTAAG
ATATAAAACCGGGTGAagttttttggagttttttatCCCTCCTGAAGTGA
AGTCGAATATGGTCTAAAATAGATCGCACATCATTTCCTTCAGAGTAAAA
GGTTTGTAGGTCTATCGCCAACAGATTATTGTGAGACCAAGACGCAACTT
ATTTACACGATCACAGTGGGTCACTTACACGTGCCTAGTTGATCATTTCT
Cgccttttttcgactttttga
Run BLAST on NCBI

protein sequence of TCONS_00009735-protein

>TCONS_00009735-protein ID=TCONS_00009735-protein|Name=TCONS_00009735-protein|organism=Clytia hemisphaerica|type=polypeptide|length=515bp
MADKAQLEVEKKAKAAAKAERKKQYEAQQAEKAKQQGGDAAGKKSKAELK
AERRAKQEAQRAAKTTGDSAKSGKKSLGDNVGKKGQGDNLGKKKPLTEKQ
SEKSQQQESKIKKQPSSSSITKSHEQPRVSSNVQMDSEKVQKKITKTLAK
QNVPQRSAAQKKVQMFAHLHQYEKDRSLTKNLSFSSCSIHPAIIKLGLQF
AEGIITGSNARCISMLCALKMVIKDYSTPPQKELSRDLESKIKPCISFLT
QCRNLSQSMGNAIKYLKHQITNLSPELPEAKAKEHLLESIDSFIQERIIL
ADQQITNFAVQKIHDGNKILIYGFSSLIINILKDAKESGKEFEVVVVDCR
PDFPGRETLKRLEDAEIKCSYTLLNNISYIIKEVTTVFLGTHALLANGNV
MAKAGTSMVAMVAKSNNVPVLVCCETYKFCERAQSDSFVFNELGDPDDLV
SLHRPHSQDILTNWRDIKSLYLLNLVYDVTPSSFVDMVVTEIGMIPCTSV
PVVLRVKNTNDGIAT
Run BLAST on NCBI

transcript from alignment at sc0000098:360339..373581-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009735 ID=TCONS_00009735|Name=TCONS_00009735|organism=Clytia hemisphaerica|type=transcript|length=13243bp|location=Sequence derived from alignment at sc0000098:360339..373581- (Clytia hemisphaerica)
TTATAGTGAATAACATTCATAATGGCTGACAAAGCACAATTAGAAGTTGA AAAAAAGGCAAAAGCAGCAGCAAAGGCTGAACGTAAGAAACAATACGAGG CACAACAAGCTGAGAAGGCAAAACAACAGGGTGGAGACGCTGCAGGAAAA AAATCAAAAGCTGAGCTGAAAGCTGAACGACGAGCCAAGCAGGAAGCACA GAGAGCTGCTAAAACAACTGGTAATTGATGAGATGTCTAATTATAGGTTT CTATGTTTTCTTTTATGATGAATTCTAACTTATGGCTTTTGTGAATTATT TAAGGTTAAAGAAAAAGAATGGAAGTCCTACAATGAACATCACATTATCT AACGCTGTCAAGACTATCAACCGAAGTGAAATGTTTTCTCCCAAAATTAT TTTTCTTTATAATTATTTATAAAGGTGATAGCGCTAAAAGTGGGAAAAAG AGCCTAGGTGACAATGTAGGGAAGAAGGGCCAAGGTGACAACTTAGGGAA GAAAAAGCCACTAACAGAGAAGCAGTCAGAAAAATCACAACAACAAGAAT CAAAAATCAAAAAACAGCCTAGCTCTTCATCCATAACAAAGTCTCATGAA CAACCTCGTGTCTCTTCCAATGTCCAGATGGACAGTGAGAAAGTCCAGAA AAAGATCACCAAAACGTTAGCCAAACAGAACGTTCCTCAACGCAGTGCAG CACAAAAGAAAGTGCAAATGTTTGCACATTTACACCAATATGAGAAAGAT CGTTCACTAACAAAAAATCTGAGGTATATAATTTTTCTTTTTTGCTCATA CTCTAGTATAAAAGAATTCATTATTTATATATAATGATTGGTATATTCAA TCACATGATAACGAGTGGAATTCGGAAATGATTGCACAAGTGAAATTTTT TGTCCGAAAGGACAAAGAAAATTCTAAACAAAAAAATCGAGAGAATCATT TTCCTTTGGAAAGAGAAAAGATTTTCAATTACCAGATTTTTGACATTTTG TTACGTTTTTTCTTCTTGGAATTTAAATTGAACTTTCTTTTGCGTAAATA AATGCTCACTTTAACCTTTAATCATCGTTGAAACAAAGGTTTTCATTTAT TTGATTCGATGAACCAAATTTAAGAAACAACCTGTCAAAATTTAAGTTTA TCTTTCCTCTATCTGATGGAAAATTATTCGTTCTTTTAAAATTTATAGAA CTTGAGAAAATCAAGTTCAAAGAGAGAAACCTTTTGGATTTTCTATTTGT CGTATTTGGAAGAAACTTTTGTCGATTTTTCAAAGACTCTTTATGATTTT TCAAAGACCTTCAGTGTTTATCATGAATCCCATGTTTATTTAATACTCCT TTCAGTTTTTCCTCATGCTCCATTCATCCAGCCATCATTAAACTTGGCTT ACAATTCGCTGAAGGAATTATAACTGGCTCAAATGCAAGATGTATTTCAA TGTTGTGCGCTTTGAAAATGGTACGTATATAAATTGTACTGTACTTAAAC AGTGTCGTGAATTATCTCTTTTTATACAGGACTTTGCAACTAACTAGATG TCGTAACGTGTATGGTATACCTACACGACATGTGTACGATGTACGTTTAA TAATTTTATTCCTATACCTTCCTCCTTTTTTATACAATCAGGTCATAATA TTTGTGAGAAAAAAGGGAAATTCACCGGGAAGTTTTGAAACCACAATCGA TTTGCAAGTGCTCTAAAGTAGGTTGGAAGGGTAGAGTTATAACTCTGAGT TTTAACGCTAGACTTAAAACTTAGGACCTTAGGATCTGATGATCCAAAAG CTCAAAAATAGTCCAATAAGGCTCAGAATATAGCCTGGAAGTCTGTCAAC CCCTCCCAAATTGAATTATTCGATTAAATTAAAGAGATAGCCCAAAATCA ACTTTCTTGCCCGAACTCTTAATCTTGAAAAACGTTAAAATAACCGGAAT TCTCAATATATTTCAACCATGATTGTAGGTCATCAAAGATTACAGCACAC CACCACAGAAAGAACTCTCAAGAGATCTAGAATCAAAAATTAAACCCTGC ATAAGGTAAAATTCAACAAAGGATATTCCAAAGTATTTCCTTGCTATCTT TTCTATTCATTTCACTTACTGATCTTTATTTTGACCTGTCTTTTCTGGTG CCCAAAGCTTTGGAGGAATCTTGATGAACTTGCTACATGAAACTTGATTC TTTTTTCAAATTTTCAACGGTTTGAAAGGAGGCATGGAAAACCCGAGTTT AAAAACCCTAGTTATGAAACTTGAAAATTTAAGGTGCACCATAAATAATC GAGTTACATTACTCGAAAAATTAAGGTGCACCTTAAAAAAACCGAGTTAT TTTTCAGACCACCCTGGACTTCCCACCTCCTCAACATACTATACAGACTA TTTCTGGAATAGTCCAATAGTTATTTCTACATATAATATTTCTCTCTAAT TTTAAAATAGATTTAATCGAAAATATTCTAAATCACCAGTCCTATGGTTG TTATCAAGTCCTTGTCTTGTACAGACTACTCAACAATTTTTTACTTTAGA TATTCTGAAGACAACATACATGAAGAAAAGTAGTGAATATAAGGGGGGGG GTTGAAAAATTATAACGGAGAATGTTTCTCTTAGCTAAGTCCTTTATAAG AAAATGAAAAGGTCTTTTTGTTGATTAAGAAATCAAAATGCCTCAGGATT ATTAACCTTTTTCCTTCACTCTTATTCGTAACAACTCCATCATTAATTTT GAATCCCCCGTCCTCGCTCAGATTCATACCTAAGAGGATTTTGTTATTTG TTCTTTCAGCTTTTTGACGCAATGTCGGAACCTGTCTCAGAGTATGGGAA ACGCAATCAAGTATCTGAAACATCAAATCACAAACCTATCTCCTGAGTTG CCGGAAGCAAAGGTATTTTGAAACTCTCGTTTTGCCTAGTGTGGCCAAGC TCTGCGTTCCTACGACATTTTCTTAGCCTCTTTTTTTTCGCAGTGATGAT AGTCCCTTCACCAGAAGCAAAGGGACATTACCAGAAGCAAAGGGACATTT AAACAATGTATCTTGTTACTATCTATTTTTGGTGGGGAGGGGGTCACAAA ATTGAAAATAGTTACAATTGTCTCTCTCTAATTCGATATTCAAGAAACTA AGACTTTTTTTCGAATCAGAGAAACATTCAATTATTATAGAAAATAAGTT ACACTACTTTCAAGCTAAGAGGACAAATGATTTAATTCGAATTACTAATA GATTCGAGTTATAGAGGTTCGAGTTATAGAGAATTGACTGTACTAGGAGC TGGGAACCTGGAATTATGATTATGGATGTGACAACGCAAGATACTTTCTC ATCATTTTCTCTTGGGGGAGGGGGTTAAAAAGTTTAGAATATTTGATTGG AATTCATTGGGTTTTTAACTTGTTGTGTTTGTATATTCATGGTTTACAAA AGGATATAATTGAATCACGTGTCTAGTCCCATTTTTAAACAAAAGATAAG AACAAAAATATAAAAAAAGAGTAAAATTTTTGAGGCTAAATAAAAAGTAT GATTCTTAAAAAAAATCCTAAAATTTAGCAAATTTGAGCAAGAAAACGGT GTATTTCAAGGACGTTTCGATCCATCAACTGTTAAGCGGTGTTTGCAAAG ACAGGAACCGTCTAGTGGCAATGAAATACACGCTTTTTTATAAGAATATC TTTTATAAGAATATCAGGGTGAAAATTGGCTGAATCGTAAGAATACGCTA AGAATACCCTCTAGGGTGAGTTTCACGGAATTTAATACTATACATTCATT TTGTATTTGGTTAACATAAAAAACTGCTTCTTTTGTTAGACTTAGATTGA CAGTTTGAGGCAAAAATATAATTTTAGCTACTAATGTGCACTCAAAAGTC TCAAACTCTCAAATTGATCATTTCTCATGTTTGTATAAAAGTCAAGTTTA AAAAAATAAGAATACGTTAAGAATATTTCACCCTCAATTTTGGCACTTTC TTAAGAATACTTGACCCTCATCCAAAGTACACTATTCCTATAAAATAAGC GTGTATTAATTATTTTTTTCCAGGGCTAATTATGTTTTAATTTTAATATT TTCTCATCATTATTTTTCTTCTTCATATCACACCAGGCGAAAGAACATTT GTTAGAAAGTATCGATAGTTTCATTCAAGAACGAATTATCCTTGCCGATC AACAAATTACTAATTTCGCAGTTCAAAAAATTCACGACGGAAACAAAATA TTAATTTACGGATTGTAAGTTTGTTTTTCACATCTGAATCTGAATTCATT GATCATGAAGGTTTTTAAGATATCATATCTTAAGATTTAGCAGATGATTG TCGTCCATACGGGCGGCATGAAACTTAAAGTTCTGAAACACTTAGACTGG AGTCGTTTATAATGCGTGTAATACTAATAATACCAATACTAATAATAATA GTACGGGATTTAGTTTGTATAAACGACTGGAAGAATCCGNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAACAAACTCTCAAA ACGAAATCAACTCAAATGAAAAACTTTCAATACACAAATCCACACACATG TTTTTCTCAAGAATTATTTTGAGCGGGAAAAAAATTATGATTGCAAATAT TGACACTTTTCTTTTGTTTAGAGTTTGTGCACAAAGGTTTCTAGACGACT AAAATTGTTCCCTTTATTACTTTTTGCTTTATTTCTACTATGTATGTATG AATTAGTCGTCTAGCTTGCTAGACTATGAAACACTAAATCAAAGTCTCTT TCTTTTAATTTTAAGATATCATATCTAAACTATGTTTTCTTATTTTACCT TTGCGTCTTTCTTTGTCTTTTTTTTCCTGAAAATTTATTGTTTTAAACCC TAATTCTAACCGAATTAACAGAAAGGGGTTGCGATCATTGAACTTCAAGC GGAAGGTTAAAGATGAATCTTTATTAAGATTTTACACATTTCGGATGACG GATTGAATCTAGCAATTTCTTTAGTTTTCGTGCTTTATATTTTTTGAGCT CTGGTGATCCAGCGTTTATATGAAAACAACCAGGATCTTACAACTTAAAA TGTAGGGAATAAGTGAGGAAAGGAGCTTAAAGTCCCACATTAGATTCCAC TCTAGCCTCTGGCTATACATTATTGGTTTTGACTGCTCTAGACATTGCAA TAGCGACTTCCGAGATTCGATTTTTGTTGTATTCTTCAGCTCTCTTCTTC TTTTCCTTACAGTTCTTCACTGATTATTAACATTTTGAAAGATGCGAAAG ATTCCGGTAAAGAATTTCAAGTGGTCGTTGTGGATTGTAGACCAGATTTC CCCGGTACGTCAATTGTTTCACAGCCCTTAAAAAAACTTCTAGCATGTTA TATCTGTGTAAAGATTGTACACAAAGACGCNTTTTGTCGTATTCCTCAGC TCTCTTCTTTTTTTCCTTACAGTTCTTCACTGATTATTAACATTTTGAAA GATGCGAAAGAATCGGGTAAAGAATTTGAAGTGGTCGTTGTGGATTGTAG ACCAGATTTCCCCGGTACGTCAATTGTTTCACAGGCCTTAGAACAATATA CTTCGAGCAAAAAAAACTTCTAACATGTTATATCTGTGTAAAGATTGTAC ACAAAGATCAAAAAGCATAAACTTCGCACAGTTGTACAATCAAAGTCATA ATATTTGAGAAAAAATGGAAATTCCCACGAAATCTTACAACCACAAACGA TTTGGAAGCGCTCTAAATTAGATTGAATGGGTAGAGTTTTAACTCTGAGT TTTAACGCTAGACTGGAAGACTTAGGAGCTTAGGATCTGAGGAACTAAAA GTCCAAGAATGGTCCAATAGGGATCGAAATATAGCCTGGAAGTCTATAAA CCTCTCCTGAATTGAAATATTCGAATAAATTTATCAATTTGCCCAAAATA TAACTTTATCACCCGAACTTTAAATTGCTGAAAACGAGGAATTAACCAAA ATTCCCAATATATTTTGACCGAGATTGTAGTTCAAAACTCAGACCTCAGA CCCAGAAAATTAGCGCCTGTTTGCGGTTTTCGCAGACAAAAATATGTTTC CAGGCTAAAGTAGACTATAGACGTAAAGTTTACTTTTGGCTGAACTTTGC TTTTTGATAAAATGTGTATGACGCTGAGTTATTTATACTGGTGATGAGTT CCCAACTTTCACCGTCTACATTTTCCAGAAGTTCGAGTGATAGAGATTCG AGTTAAAGAGGTTCGAGTTAAAGAGATTCGAGTTAAAGAGGTTCGAGTTA AAGAAGTTTGAGTTAAATAGGTTTGAGTTAAAGAAGTTCGGTTTGGGGAG GTTCGAGTTAGAGGGGTGCGAGTTAAAAATGTTCGTTAAAGAGGTCCGAG TTAAAGAGGTTCGTTAAAGAGTTATATTATTTTCCAACTTTATACCGTCT CCATTTTCCACATCAACCTGATGCAAGACACAAGTGAGAAGTTTCAAACT ATTGTTTTTACGATATATAGGTCGTGAGACGTTGAAAAGGTTGGAAGACG CAGAAATCAAATGTTCATACACCCTCCTCAATAATATCTCATACATCATC AAAGAGGTGACGTAATGTTTATTTCAGGCGAAAATAAAAAAAATGTAATG TTTCCGGAAATCGGCCGGGGAAGAAAAAAGATTTTCCGACCCGGCCGCTG ACTATGGGTTCATCTATATGGTTCATCATAAAGAAAATCAAGTTGGCCGT TCAAGCTATCAAACGTCGTTTTGTTAGATATTCCCGCTTGTAAATCAAAT TTTGATACATTAGTATTCAGGACTTACTTTATACTGTTTGTACCTAAAAG TTATCTCTTAAAGTTATATTTCAATAATTCTAAGTTATCAAAAAAAAGCA AAAAAAAACTTTTTTCCGGCCGGCCGCACGAGATCTTTTTTCCTTCACCC GCATTCCGGAAACACTACATTTTTTTCTTCGCCTCAGCCGATTTTTCTTC TGTCTATGAGCCTGTAATAAACACTGAACAATTATTTCATGCAGCAGTTT CTTTGTATAGATATAGTAAACTTTTATGAACTCCTCCGGGCATCAGTTAC CATAGTAATAGTTTGAAAACAAGGTCAGCGTTGCTCGTGACGTAATTTAT GAATAGGTCTATTACACTTTTTTTATCTCTTCAGGTGACGACTGTTTTTC TTGGAACCCACGCGTTGCTTGCCAACGGCAATGTCATGGCTAAAGCTGGA ACTTCTATGGTTGCCATGGTAGCCAAATCGAACAATGTACCTGTCTTGGT GTGTTGTGAAACGTACAAATTTTGTGAACGAGCTCAAAGTGATTCTTTTG TCTTCAATGAATTGGGTAAGCTGCGCGTTAATTCATAAGAACATCTGAAT TTTTTTAATTCTTCGGATATTCTTAAATTTAGAGTTTAAAGCCTTAACAT GTTCTTAATGTAACATGTTCTTATTTTTGCCATTTTGTGAGTTTTTTTAG CGTTTTTCCTTAGAAATCGGGTGTTTTAATAAGAGTCCTTGAAACCTTTT GAATGTTCTTAACTTGTTCTTGATATTTTGGCCATCGAAGTCTTATGTTT GTATAAAGTTTGTTCTTGTAAAAACACGTGTATACTTATTATGCAACTTT ATGTCCTACAGTTAACTTCTTGAGAATTCGAATTAAAACGGGGAATCTTA TTCGTTCGAGTTACAGAGAGATTCGAATTATAGAAAACAGGGGCTGGAGA TTTTCGAGTTTCGAGTTAAAGGGAGATTGGAATAATATAAGTTCGAATTA GCGAGAACAGGCCATATTTTAGAAAGGCAGTGTAGCATCCGATGGTGGCC AAAAACGTTTAGTGGACGTTTTTTTTGTGTCTACGAATAAAATAGGGGAA AATGGAAAGTAAAAAGTAAACCGTTTGTATAAGAAAGTAGAGCAGTTTGT TGTCGATATTAGACTGGAGTATACTTTATAATCCGCGTAATACAGTAATA TTATTGTTATGTAATAATACAATAATGATAACGGGATAATATCAGTTTGT ATATAAACTATAATTTGTCTCTTCCATTATTATTCTTTGCTTATGTCTGA ATTAGTAAGTTGACATGCTAGACTATGTGTCAATACAGTGGCATCTCAAT TCCAGAACCACACTCCACTTAAATGACCATAGTAACAACAGTTATGTTTT ATTTTTACAGTAGTTAATGATATGCAGTTAGCGTTCCAAGAAAAGTCTCA TTGTATATTAAGATGGTTTCTCCTTAACGGTGACTGTAAATTATTTCGAG TTAAAGGGAGATTGGAATAGTAGAAGTTCGAATTAGAGAGAGCAGGCCTC ATTTTAGAAAGACAGGGCACTTTAATGTTTTTCCACTAAAAGGGTATTAG AGAAGAATGAGAGACTTTGGTGTGGTACAAACAAAAGTAAACCAAACAAA ATTTGTATATTATTATTAAAAAGAGTAGAACAGTTTGTCGACAATATGCA ATATGTGGTATTATGTAATATAGTCAATTTTGTTCTTAATTCCAACCACA CTCCACTTAAATGACCATAGTAACAATGTTATGTTTTATGCTTAGTTGAT GATTTACAGTTAGCGTTCCAAGAAAAGCCTCATGTTTAAAGGGAATTTCC CTGTGGAACTTACAGTGACGTCATAAGGGTGTCTTGTTATCACAACTATT TGATGAAACGACACTTTTTTGAATGTATCCCTTATAAAGAGAAGAGCGTG GTTGACTTTGCTTTGTTTTTACATAAGAGATACATTTGTAAGGTTGCAGT TAGAGATCGATTAAATATTGAGATTTGAATGGACGTTATTTGCAGTTAGT TTCTGATACTACGCTTATATTACGCTGATATATAACCGCAACTCGGCAAC GAAAAGATAGGTCGTATATTTGCGGGTTCGATACTCTATCGAAGGAAACA GCAAGCCTTTTGTCAAACGTGACACCACGATTGGCTGGGAAAAAAACACA GCTACACATCTACATCTGGCTGGTCTTTGAAGTTCATCAACAGGCACAAT CACAAAGTTCATGTCTCCACACAACGCTATGGCAACGTACAAAATCGAGC TCGGTTCCGGCAATTTAAAAGGATCTTTTGGTTTCGGTAAGAAAGAAGAT TATACGTATGACGTACCGGAGAACGCAATTCACGTTTCCATTGACCAAGA AGACCACAGCGCAAATACGTTGAATATTGGTAACGGGAACGGGAAGGTCA CATTACGTTGGGATAAAGCGTCACGTAAGGCTCACGTTCACGCCTGGGTT AATGGTGCCGTTGGACAGGGGAATGAAGTACGCTGGACTGTTTACTGCTG GCTGAAAGCTTAAAAACGCAAGTGTCATATATCAAATCTTTTGTTTTGAA TGTAAAACTGTTACTCTAGCTTAAAAGGTAGTGATTATCGAAAGGATACA TTTTTTTGATTGTCCGAGAGGGCGGAATGGAACGTTGAAATTTGATAAGT TCGGACATCAATAAACTTAAGAGCCATTTTTTTTAAAAATCTTCAGAATA AAGAAAGTCTGATACCTCACCCTCTTAGATTTTGATGAAATTTTGACCAA ATGATCTATCACACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATTTTCTTGTGTGAT AGATCATTTGGTCTAAATTTCAGCAAAATCCAAGAGGGTGAGGTATCACA CCCTGAAGACTCTTAAAAAAAATGGCTCTTAACTTTTGATTATAGCTAAT AATACGTTTCAGATTTAAAATATTTCTTGAAAATATCTACTCAGAAAAAC CATTTTTCTCATGTCATTTGAATTATTCTTGAATAGCGCACTGCGCTGAA TATAACATATATAACAACTTGCACGTATCTTTAACTGAGCCGCATTGAAT TGTCGGATTGCAACTCGTACAAATGTAAAAAAAAGTGAAAAGTAATAATT ATGACGTATGCGTTGCGGAGCGCTATTGCTACAAACTTTTCAAATCCGAT CCAAAATCTGAATGCCAAAACAAAATTTATCAACGTTAAGCTATCAGAAC AACTTAGAAACTACAAACCAGACTAAAAAAAGAATCTGTGCATTCGTCTC GTATACTGTGATGAGTCTAGTCGATTCAATTTTATGTCGATTGCGTACAT AGTCGTAGTAGAGTTTCGTTTGGTTCTTTCTTATCCTAACTTTAACTTAT CAGCTATCAGACTGCAACAATCAGTTTTTGTCAAAAAGGAACTTCACAAA TTGATTTTTTTAGAGTATCTAAGCAAGGCCATCCCCCTTTTTAAACAATA CTCCATAGAAATTTTTGAAAGTTTTGCCAGCTTAGCAAAAGTTTAGATGA TCTAGTTTTGATGTCTCAAAGAACCAAAAATTGACAAAATAAAGTATAGC AAATCCGTATAGCAAAAAAAAAGACCATTTCGCCGCCGGAAACGAAAAGA TCTTTTTGTTGTCTCATCTTCAGGCGATCCAGACGATTTGGTGTCTTTAC ACAGACCTCACTCACAAGACATTCTAACAAACTGGAGAGACATTAAATCC TTATATTTGCTGAATTTGGTTTACGATGTGACGCCATCTTCTTTTGTTGA TATGGTTGTCACGGAGATTGGAATGATTCCTTGCACTTCGGTACCGGTAG TTTTAAGAGTCAAAAACACTAATGATGGTATCGCTACGTAATGTTTATGA TTTCAAAATGTTAGAATATTATAGATTTTTTTTTGGAATTGAATTGCTGG AACTCGCTTGAAAAATCAAATTGTTCTTTGACTATAAAGAGCGATCGACG AATGTCTACACAGATATCTAAGATATAAAACCGGGTGAAGTTTTTTGGAG TTTTTTATCCCTCCTGAAGTGAAGTCGAATATGGTCTAAAATAGATCGCA CATCATTTCCTTCAGAGTAAAAGGTTTGTAGGTCTATCGCCAACAGATTA TTGTGAGACCAAGACGCAACTTATTTACACGATCACAGTGGGTCACTTAC ACGTGCCTAGTTGATCATTTCTCGCCTTTTTTCGACTTTTTGA

Coding sequence (CDS) from alignment at sc0000098:360339..373581-

>TCONS_00009735 ID=TCONS_00009735|Name=TCONS_00009735|organism=Clytia hemisphaerica|type=CDS|length=1548bp|location=Sequence derived from alignment at sc0000098:360339..373581- (Clytia hemisphaerica)
ATGGCTGACAAAGCACAATTAGAAGTTGAAAAAAAGGCAAAAGCAGCAGC
AAAGGCTGAACGTAAGAAACAATACGAGGCACAACAAGCTGAGAAGGCAA
AACAACAGGGTGGAGACGCTGCAGGAAAAAAATCAAAAGCTGAGCTGAAA
GCTGAACGACGAGCCAAGCAGGAAGCACAGAGAGCTGCTAAAACAACTGG
TGATAGCGCTAAAAGTGGGAAAAAGAGCCTAGGTGACAATGTAGGGAAGA
AGGGCCAAGGTGACAACTTAGGGAAGAAAAAGCCACTAACAGAGAAGCAG
TCAGAAAAATCACAACAACAAGAATCAAAAATCAAAAAACAGCCTAGCTC
TTCATCCATAACAAAGTCTCATGAACAACCTCGTGTCTCTTCCAATGTCC
AGATGGACAGTGAGAAAGTCCAGAAAAAGATCACCAAAACGTTAGCCAAA
CAGAACGTTCCTCAACGCAGTGCAGCACAAAAGAAAGTGCAAATGTTTGC
ACATTTACACCAATATGAGAAAGATCGTTCACTAACAAAAAATCTGAGTT
TTTCCTCATGCTCCATTCATCCAGCCATCATTAAACTTGGCTTACAATTC
GCTGAAGGAATTATAACTGGCTCAAATGCAAGATGTATTTCAATGTTGTG
CGCTTTGAAAATGGTCATCAAAGATTACAGCACACCACCACAGAAAGAAC
TCTCAAGAGATCTAGAATCAAAAATTAAACCCTGCATAAGCTTTTTGACG
CAATGTCGGAACCTGTCTCAGAGTATGGGAAACGCAATCAAGTATCTGAA
ACATCAAATCACAAACCTATCTCCTGAGTTGCCGGAAGCAAAGGCGAAAG
AACATTTGTTAGAAAGTATCGATAGTTTCATTCAAGAACGAATTATCCTT
GCCGATCAACAAATTACTAATTTCGCAGTTCAAAAAATTCACGACGGAAA
CAAAATATTAATTTACGGATTTTCTTCACTGATTATTAACATTTTGAAAG
ATGCGAAAGAATCGGGTAAAGAATTTGAAGTGGTCGTTGTGGATTGTAGA
CCAGATTTCCCCGGTCGTGAGACGTTGAAAAGGTTGGAAGACGCAGAAAT
CAAATGTTCATACACCCTCCTCAATAATATCTCATACATCATCAAAGAGG
TGACGACTGTTTTTCTTGGAACCCACGCGTTGCTTGCCAACGGCAATGTC
ATGGCTAAAGCTGGAACTTCTATGGTTGCCATGGTAGCCAAATCGAACAA
TGTACCTGTCTTGGTGTGTTGTGAAACGTACAAATTTTGTGAACGAGCTC
AAAGTGATTCTTTTGTCTTCAATGAATTGGGCGATCCAGACGATTTGGTG
TCTTTACACAGACCTCACTCACAAGACATTCTAACAAACTGGAGAGACAT
TAAATCCTTATATTTGCTGAATTTGGTTTACGATGTGACGCCATCTTCTT
TTGTTGATATGGTTGTCACGGAGATTGGAATGATTCCTTGCACTTCGGTA
CCGGTAGTTTTAAGAGTCAAAAACACTAATGATGGTATCGCTACGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005446XLOC_005446Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009735-proteinTCONS_00009735-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009735-exon-sc0000098-1575043694:373362..373581TCONS_00009735-exon-sc0000098-1575043694:373362..373581Clytia hemisphaericaexon
TCONS_00009735-exon-sc0000098-1575043694:372809..373157TCONS_00009735-exon-sc0000098-1575043694:372809..373157Clytia hemisphaericaexon
TCONS_00009735-exon-sc0000098-1575043694:372112..372226TCONS_00009735-exon-sc0000098-1575043694:372112..372226Clytia hemisphaericaexon
TCONS_00009735-exon-sc0000098-1575043694:371527..371603TCONS_00009735-exon-sc0000098-1575043694:371527..371603Clytia hemisphaericaexon
TCONS_00009735-exon-sc0000098-1575043694:370670..370772TCONS_00009735-exon-sc0000098-1575043694:370670..370772Clytia hemisphaericaexon
TCONS_00009735-exon-sc0000098-1575043694:369318..369445TCONS_00009735-exon-sc0000098-1575043694:369318..369445Clytia hemisphaericaexon
TCONS_00009735-exon-sc0000098-1575043694:368151..368169TCONS_00009735-exon-sc0000098-1575043694:368151..368169Clytia hemisphaericaexon
TCONS_00009735-exon-sc0000098-1575043694:367868..367940TCONS_00009735-exon-sc0000098-1575043694:367868..367940Clytia hemisphaericaexon
TCONS_00009735-exon-sc0000098-1575043694:366826..366911TCONS_00009735-exon-sc0000098-1575043694:366826..366911Clytia hemisphaericaexon
TCONS_00009735-exon-sc0000098-1575043694:366067..366247TCONS_00009735-exon-sc0000098-1575043694:366067..366247Clytia hemisphaericaexon
TCONS_00009735-exon-sc0000098-1575043694:360339..360908TCONS_00009735-exon-sc0000098-1575043694:360339..360908Clytia hemisphaericaexon
TCONS_00009735-exon-sc0000098-1510915933:373362..373581TCONS_00009735-exon-sc0000098-1510915933:373362..373581Clytia hemisphaericaexon
TCONS_00009735-exon-sc0000098-1510915933:372809..373157TCONS_00009735-exon-sc0000098-1510915933:372809..373157Clytia hemisphaericaexon
TCONS_00009735-exon-sc0000098-1510915933:372112..372226TCONS_00009735-exon-sc0000098-1510915933:372112..372226Clytia hemisphaericaexon
TCONS_00009735-exon-sc0000098-1510915933:371527..371603TCONS_00009735-exon-sc0000098-1510915933:371527..371603Clytia hemisphaericaexon
TCONS_00009735-exon-sc0000098-1510915933:370670..370772TCONS_00009735-exon-sc0000098-1510915933:370670..370772Clytia hemisphaericaexon
TCONS_00009735-exon-sc0000098-1510915933:369318..369445TCONS_00009735-exon-sc0000098-1510915933:369318..369445Clytia hemisphaericaexon
TCONS_00009735-exon-sc0000098-1510915933:368151..368169TCONS_00009735-exon-sc0000098-1510915933:368151..368169Clytia hemisphaericaexon
TCONS_00009735-exon-sc0000098-1510915933:367868..367940TCONS_00009735-exon-sc0000098-1510915933:367868..367940Clytia hemisphaericaexon
TCONS_00009735-exon-sc0000098-1510915933:366826..366911TCONS_00009735-exon-sc0000098-1510915933:366826..366911Clytia hemisphaericaexon
TCONS_00009735-exon-sc0000098-1510915933:366067..366247TCONS_00009735-exon-sc0000098-1510915933:366067..366247Clytia hemisphaericaexon
TCONS_00009735-exon-sc0000098-1510915933:360339..360908TCONS_00009735-exon-sc0000098-1510915933:360339..360908Clytia hemisphaericaexon
TCONS_00009735-exon-sc0000098-1491911889:373362..373581TCONS_00009735-exon-sc0000098-1491911889:373362..373581Clytia hemisphaericaexon
TCONS_00009735-exon-sc0000098-1491911889:372809..373157TCONS_00009735-exon-sc0000098-1491911889:372809..373157Clytia hemisphaericaexon
TCONS_00009735-exon-sc0000098-1491911889:372112..372226TCONS_00009735-exon-sc0000098-1491911889:372112..372226Clytia hemisphaericaexon
TCONS_00009735-exon-sc0000098-1491911889:371527..371603TCONS_00009735-exon-sc0000098-1491911889:371527..371603Clytia hemisphaericaexon
TCONS_00009735-exon-sc0000098-1491911889:370670..370772TCONS_00009735-exon-sc0000098-1491911889:370670..370772Clytia hemisphaericaexon
TCONS_00009735-exon-sc0000098-1491911889:369318..369445TCONS_00009735-exon-sc0000098-1491911889:369318..369445Clytia hemisphaericaexon
TCONS_00009735-exon-sc0000098-1491911889:368151..368169TCONS_00009735-exon-sc0000098-1491911889:368151..368169Clytia hemisphaericaexon
TCONS_00009735-exon-sc0000098-1491911889:367868..367940TCONS_00009735-exon-sc0000098-1491911889:367868..367940Clytia hemisphaericaexon
TCONS_00009735-exon-sc0000098-1491911889:366826..366911TCONS_00009735-exon-sc0000098-1491911889:366826..366911Clytia hemisphaericaexon
TCONS_00009735-exon-sc0000098-1491911889:366067..366247TCONS_00009735-exon-sc0000098-1491911889:366067..366247Clytia hemisphaericaexon
TCONS_00009735-exon-sc0000098-1491911889:360339..360908TCONS_00009735-exon-sc0000098-1491911889:360339..360908Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000098supercontigsc0000098:360339..373581 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
14.5005 11.3123 4.6097 5.85309 2.05636 5.62598 2.13842 0.000840965 10.5093 14.2562 10.5713 8.23207 12.3905 13.0052 15.2382 16.4096 13.4803 13.5072 7.47548 7.33351 8.98748 6.7099 13.9236 15.5037 3.76219 4.80843 10.2196 9.31817 15.0263 15.2052
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000649IF-2B-related
Vocabulary: Biological Process
TermDefinition
GO:0044237cellular metabolic process
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0044237 cellular metabolic process
Blast
BLAST of TCONS_00009735 vs. Swiss-Prot (Human)
Match: EI2BD (Translation initiation factor eIF-2B subunit delta OS=Homo sapiens GN=EIF2B4 PE=1 SV=2)

HSP 1 Score: 424.476 bits (1090), Expect = 1.019e-140
Identity = 201/369 (54.47%), Postives = 272/369 (73.71%), Query Frame = 1
Query:  445 KKITKTLAKQNVPQRSAAQKKVQMFAHLHQYEKDRSLTKNLSFSSCSIHPAIIKLGLQFAEGIITGSNARCISMLCALKMVIKDYSTPPQKELSRDLESKIKPCISFLTQCRNLSQSMGNAIKYLKHQITNLSPELPEAKAKEHLLESIDSFIQERIILADQQITNFAVQKIHDGNKILIYGFSSLIINILKDAKESGKEFEVVVVDCRPDFPGRETLKRLEDAEIKCSYTLLNNISYIIKEVTTVFLGTHALLANGNVMAKAGTSMVAMVAKSNNVPVLVCCETYKFCERAQSDSFVFNELGDPDDLVSLHRPHSQDILTNWRDIKSLYLLNLVYDVTPSSFVDMVVTEIGMIPCTSVPVVLRVKNTN 1551
            +++ K   +Q VP R     KV +F+HL QY +  SLT+ +S  S  IHPA+++LGLQ+++G+++GSNARCI++L AL+ VI+DY+TPP +ELSRDL +K+KP +SFLTQCR LS SM NAIK+L  +IT++     E +AK  L  +ID ++QE+I+LA Q I+ FA QKI +G+ IL+YG SSL+  IL++A   G+ F VVVVD RP   GR TL+ L  A +  SY L+   SY++ EV+ V LG HALLANG+VM++ GT+ +A+VA+++NVPVLVCCETYKFCER Q+D+FV NEL DPDDL      H    L NW++  SL LLNLVYDVTP   VD+V+TE+GMIPC+SVPVVLRVK+++
Sbjct:  156 RRLVKKPERQQVPTRKDYGSKVSLFSHLPQYSRQNSLTQFMSIPSSVIHPAMVRLGLQYSQGLVSGSNARCIALLRALQQVIQDYTTPPNEELSRDLVNKLKPYMSFLTQCRPLSASMHNAIKFLNKEITSVGSSKREEEAKSELRAAIDRYVQEKIVLAAQAISRFAYQKISNGDVILVYGCSSLVSRILQEAWTEGRRFRVVVVDSRPWLEGRHTLRSLVHAGVPASYLLIPAASYVLPEVSKVLLGAHALLANGSVMSRVGTAQLALVARAHNVPVLVCCETYKFCERVQTDAFVSNELDDPDDLQCKRGEHV--ALANWQNHASLRLLNLVYDVTPPELVDLVITELGMIPCSSVPVVLRVKSSD 522          
The following BLAST results are available for this feature:
BLAST of TCONS_00009735 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
EI2BD1.019e-14054.47Translation initiation factor eIF-2B subunit delta... [more]
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