TCONS_00009746 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009746
Unique NameTCONS_00009746
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2557

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009746 ID=TCONS_00009746|Name=TCONS_00009746|organism=Clytia hemisphaerica|type=transcript|length=2557bp
AAATCTTGTACGAAGTGTCTCCTTGAATCTAGACCCAAAGAATACGACGC
CGCCAACGACGACGGCGACAACAAAGAAAATACCAAGGAACAGTCGTTTA
GGCGtGCCTCAAAATCAATACCATGACTACCGGAGGCGATTTATATGTTA
TTGGTGTGATCGCCGCTTCCCACATTTCAGTGCGTTGAAAGCACATATTT
CGGCCCATTTGGAGAGCGCTAGAAAGTTATGTACCATTTGTAATAAAACA
TTCAGCAAAAAGAGTTCACTGGAAGAACACATCAGAACTCATACGGGTGA
GCGACCATACAAATGCAACCAGTGTGGAAAAACGTTCGTTACATCAGGAA
AGCTGACATCACATTTGAAAATACACGCCGGCATTTACGCCCATCACTGC
CAATTGTGTGGAAAGAAATTCCGCGAACACTACAATTTGAAGATGCATAT
GAAAATGCACGAGAGGCGTGCTCAAGAGGAGAAGGAacctaaaaaaacaa
agatgTGGAACTGTAAGGAATGCGAGGCGGGTTTCACGCGCAAAGAAGAC
TTGAATTCTCACAAGAAGGAAGATCATAAAACACCACATCAACTCATGTT
AGAAGAACGCAAACTAAAGAGAAAagctgaagaaaaagaaaaagcagTAA
ATGAGGATGGTGTATCAGCCGCCAAGAAACGAACTTTGAGAACAACCGGC
TTCACCCAAAAAGAAGATGGCACATATGTTTGCGATTTATGTCAAAAAGA
ATTCGTAAAGAAGGATTACCTGAACCGTCATTTAAGACGTCACGAATCAA
GCACCGCTACGGATTGCGGAGAATGCGGGAAGACGTACCGAGATAAACCA
ACTATGCGACAACACATGGTTGATGCGCACGGAAGCGAAGCGAAACACTA
TTGCAATATATGTAAGCAAGGCTTTGTTATTTTGTCAACCTTACAACGTC
ACATGCGGATCCATCTCGATTCACGTCCGTTTACTTGCGATCAATGTCCG
GGTACTTACAAATCGAAAGAGGATTTAAGGCGCCATAAGCGGACCCACGA
GGCCGACCGCCCGTACAAATGCGATATTTGTCATAATGGATTTGTTGATA
AATCAGGGCTGAACCGTCATATGCGGATTCATACCGGTGAAAAACCATTC
ACGTGTCCGGATTGCGGGCAGTCGTTTACTCAATGTGGAACCATGAAACT
CCACCGTGCTAAGAGACATCCCAATAGCACTATCGAGCTTACGGACCTTC
GTTCCGGTGCACGAATTGCCGCCGAGATGACGACGAAAACCGCCACTGAT
GAAGACACTCCGAAAATTCCCGAAAAATCTGACCCTGATGAAGAAGTCAC
AGAGTCGGAAGACGAAACTGCTCCTACCACGGAAAACTCCAAGTTTAGTA
CGGTTCAAGAACTCTTGAATTGGATTGGTCAAAATCAGAATTCAGAACAG
AATACGTCATACGAAATGTAGTGTGACTTGATTCTGAAAAGGTACAACAA
CTGTGTATTGTTTAGATTCAGANTTCATACGAAATGTAGTGAGACTTGAT
TCTGAAAAGGTACAATAATTGTGTATGGTTTAGATTCAGAGATTACCAAT
TTCCcatcatttttccattttgtgcAGACGAACGATTGAATGAGCTTGAT
ACTCTGGAAATGACTCGGAAAATGTTTTTCGAGGAATGAGACATTTTCAT
TCGTATGTGTATCAGATATTCTCTCTACAttttttaggcgtacaaacttt
cgctaGGTCgagaaatcgcgaaatttacgaaaatttattttcgtgAATTG
GGCGAAAAATGTTCTTTCAATCAAGAAAAGTTTCACacgaaaaaatggct
tagagtgACAAACATTTCTTGAATTGAAAGTAAAACTTCCTTATTATGAG
GATTAAGCAGGTTAAAGAGCGCCATAAatgttacattttattttaagtta
gaagtttatagattttctattttgtttagATATTTCGCGAGCatcataaa
cttttgcgaatggccttttaagaattttagagacatttactttcgcgaaa
agagctaaaattcgcgaaaattgcgaaagtttctgttcgcgaaagtttgt
acgtaCGCCTGAAGTAAGCCCAACGACCATATTTCATACAGAAAATATTC
ATCTTTCTTGATGTATGATAAAGTCTTTTACTATGTTATCAAATCAGGTG
TCAGTAAAATTACAAAGACGCGAATAACCATTGATACAGTTTGGTAAGAT
GGCGATCAAATTCGAAATTGAAGAAGATGTTATTAATGACGGCTTCTTTG
AAAAGGACTAGTAAATTGTCTAAACTTTCATAGGTactttttattgattt
atttgtAATGATTAGTTACATGTTTGGACCAAAAAGGACGGTGGCCCATA
ATGCTCACGGCGTACTTCCAGTTCTGACACACctctaggctgctggcatc
cactaacggattcgtgttCCTtatacctggggttttgtagaggtctgcga
ttcagactaacaCACTTCCAGTTCACAAATTTTACAAGTGCTGGAAGTGT
CTTGTGA
Run BLAST on NCBI

transcript from alignment at sc0000098:420442..432588-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009746 ID=TCONS_00009746|Name=TCONS_00009746|organism=Clytia hemisphaerica|type=transcript|length=12147bp|location=Sequence derived from alignment at sc0000098:420442..432588- (Clytia hemisphaerica)
AAATCTTGTACGAAGTGTCTCCTTGAATCTAGGTTAGTAGCAATCTTTTG
TAAGTGTGAACATAATGATGTCAAAGAATGTCTCCAAAATCTTGTACGAA
GTGTCTCCTTGAATCTAGGTTAGTAGCAATCATTTGTAAGTGTGAACATA
ATGATGTCAAAGAATGTCTCCAAAATCTTGTACCAAGAGTCTCCTTGAAT
CTATAGAAATATGTTCTAAATGTGAACAATAGTTACACCCCTGTGTCACA
GACCCGGTGGGATCCTTCCCCACTGGAAAACTTTGCCAAAATTTCGTCCA
CTGTGGGAAAAATAACCTACAATTTCGATCCAACTGGAAAATTGACTTTT
AGTATAAATTTAATCTCCATTCAATGGAAAAAGTTGCAATCCAAAAGTAT
CTCAATTAAATTTTTTACCTGAGAATGATTTCTATTGATTATTATTCAAA
AAACATTTCAACAAATATTTTTCAGCATAAGCTTTTCGTTTTATTAAAAA
ACATCATCAGTGCATATACAAGTAAAACGTTCAAAATAAAATGNACGGAA
ACAAACTTTTTGGGTAATTCGAACAGGTTTTCGGGTATGATCATATCATT
CTGCTCTTTTTCATGAAAAATCTTAACAACACTTGCTACAAATCTTGAAG
GGAAACCAGCTCTTTCAAACTTATCAACTACAATTTCCTTTTCCATTGAA
AAATCTGATGCAATATTCTTTGTTCGATGTAGGTCAACATTCACAGCATT
TCGCTTGAACTTTTTGGGAATTTTTGATGACCAATGGACTGGAACCTTTT
TATCACTCCGAAATACTGATGTGCTAATTTCGCCATTTTCATACGTTAAT
TTGGTGTCAAGGGATTTTTCGGGTTTCACTTCAACTGTGAACTTGATATT
TGGATGATAGTTATTCAGACTCTCGAGAAGGGTATCCGGTTCATCTTTAT
GTCGTTTGATTATTAAATCATCGACAAACCTTTTGTAAAACTCTGGTTCG
GTAGGGGTTATGACATCTTTTTCCAACTTTGTCATGTAAATGTATCGAAA
GTAACTGACAATGGACCACCCATAGTGCAGCCATCGATCTGTTTGTAAAA
TTTGTCGTTGAACATAAAAAGACTATCAGTGGATAATTTTAGAAGTAAAC
GCTTGAAAACTGTTTTTGAAGCAATTGGTTTGAATTTCTTTCTATTGTAG
ATTTTGTCAATAATATAATCGATAGTTGGACGTACCGGAACATTTGTAAA
TAGACTTTCAACATCGTACGAAACAAACTCCTCCGAATCATTCAATCGCG
GTAAATTTCTTATCATTGAAGGGAATTTTTGAGTGTTTTTGATCACGTAG
TCATTTTCGTCAACCAAAGGTTTTAAGTAGTTTGCGATAACTTGAGACGC
GTTGTATGTTGCAGTACCAACTTGAGCGATAATAGGACGAAACTTCAAGT
CGTTTACGTTGATTTCCGTATTGCTTTTGAACTGGTTGATTTGATGACGG
TATCATGTCTTTATATTTTTCAAACTTTTTGAAATTTCTGTAGAGGAAAC
TTTTGAATTTTTTGAGGTCTTCCATGGTAGTATCAGTTGAATTTTTGTAA
ACACCTTTTGTGATTCCTTCATCGACCATACTTTGAAGTNTTTTCTCAAA
CTTTTAAAAAAAGTTTGTCATAACCCCTACCGAACCAGAGTTTTACAAAA
GGTTTGTCGATGATTCAATAACCAAACGACATAAAGATGAACCGGATACC
CTTCTCGAGAGTCTGAATAACTATCACCCAAATATCAAGTTCACAGTTGA
AGTGAAACCCGAAAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTGTATATGCACTGATGATG
TTTTTTAATAAAACGAAAAGCTTATGCTGAAAAATATTTGTTGAAATGTT
TTTTGAATAATAATTAATTTTCTGGCTATATTTTTTTACAACAACGATTT
CTATTGACTGAAAGCTATTTTGATGATCAAGAAGTGTTACTGGTAACAGA
TAAATTTATAGGTCATTGCGTTATGGATTGTATCTAGTCCGTATAAAACA
CCCTGGTCTGGAAGGCTATTGTTGTAACTTTTTGTTAACATTTCCCTTTG
TTTAATAACGATTATAAAAATCGATTTGCTCAGTTTTTGATCACGTTACC
AAATACTCCTCCTGAGATTGGTTCAAAAGTTGATCACATGATCAGAAAAT
GAGCAAACCAAACTAATTTATCAACGCAAGTTCAAATTCGAAACAATAGA
AAGAACCAAAAGGCTTCCAAACCGGGGTTTCTTATACGGACTATGATCTA
GCATTCATGTTTTCGTTTCAGACCCAAAGAATACGACGCCGCCAACGACG
ACGGCGACAACAAAGAAAATACCAAGGAACAGTCGTTTAGGCGGTAAATC
TATGTAGTTTTGTAGTTTTCGTCCATTGAGTTTAAAGCCCGAAGGGCTAG
AGTAGAANGGTAAATCTATGTAGTTTTCGTCCATTGAGTTTAAAGCCTGA
AGGGCTAGAGTAGAATCTCTAAACCTTTCCGAGGCAAGAAAAAGTGAAGC
CACTTACTTCCCATCCAGGAGTCTCGAGTCTAGCCCTTCGGGCTTGGAAG
TGAATGTTTTCGCCATCATGGAAGTAAATGTTCGAATCTGTACGCAAATC
GAACGTTTGCTTCCATAATGGCGAAATCACGAAACTTAACAAAACATAAA
AAAACATTGACACTTATCAAGCCTTTTAAGGACGCGGAAAGATTTTCTAA
AAACAAATTGAAGAATCTTGATTTCTTTTTCTCTTTTTTGGTTGGAAAAA
ATAGTCCACCTAAAGCTTTTTGATAGACTGGATGGTACGATCATTTGGCC
CCTTCTTGGTATATGATAGCTTTCAATTTTTGTTTTTTTGCCTCTACAAT
CAGTGCCATAACATGTTGGCACTTTTGGCTAATTTACCATTTTTGGAAAA
TTGAAGTTCGAGCGAGAATGTAAATTTCAGGCCTTAAACTTGATTTCATC
GATTATTTCGATCTGGGAGGGATTTATTGGTTTCTAGGCTATATTTCAAG
CCCTACTGGACCATTTTTGAACTTTTGGATCCTTAGATCCTAAGGTCCTA
AGTTTTAAGTCTAGCGTTAAAACTCAGAGTTAAAACTCTACCTTTCGAAC
CTACTTTAGAGCACTTATAAATCGATTGTGGTTTCAAAACTTCCCAGTGG
ATTTCCCTTTTGTGCCATGTATTTTGTCACTGATTGTAGTTGTTTTTGAA
AGGTAACAAGGGGGTGAAGGGACCTTTTTGTTTGAAAATAAGGAATTGCA
AATTTTATTTATCAACTTCGAGCACTTTTTTTGTTACTTTGGATTTGTGC
GTTTTTTGTTTTCCAAAATGGTGATCTCACCAAGTCTAAGTCTACTTAAA
CTTGACTCGGCGTCATCAAAAAATATCAATAAGCAAATTTCAGCCTGAAG
TAGACTCCAGTAGAAAGGAAAATGGAGGTCGAAACTAGTAACCGAGGAGC
ATTTTGATGCCCCTAACATTTCGCTTCCCTCACAAAAAAGCTACTAGACC
CTACAGTTGACTTTCTCTAATTCGATCTTCGCTGGACCAAAAATTCTCTT
CCAATTACAAAGAGATTCGAATTATAGAGAGTATTTTAGGTGGCTTGCTC
ATTGACGGGTTCTGAGAATTAGTTTGAATTAGAGAAAGATTCGAATATGA
GAAGTTCGAATAAACTGTCACCCACCATGACTGGGCAACAAAAAAAATGT
TCACCCTCTAAATGTTCAAAATAGATGCCACTTTAATGGACTAAAATATT
CTAACTTGATTTTGACTTGTTAGAATCATTGCATTAATATTTTCAATCTT
TTGTACCGTCATTTCTCCATTTTAGAAGATTGAGTTTGAAAAATCAATTT
GAAATTGAGTTTTTGCCACCGAATAACGGTGGTAAAAAAGTGCTTGAAAA
ATACCCTGGGTTACTGTATTCTATTTGTAGGACCACATTCGCATGATTAC
AGGCGGTTCGTTTGTTTTTGGTGTGACCGGCGCTTTACAATCTACAGCAT
GTTTAAAGTTCACGTCGCCTCTCATCTGGAGGCGGTCAGGGTGCCATGTA
CAATATGTTCTAAATCATTTACGACAAAGAGTTCCTTGAAAGACCATATG
CGAACTCACACAGGTAAATACATCACTTTGTTCTTATAAAAAAATGTACT
TTATTTTTTATTTACAGTGCCTCAAAATCAATACCATGACTACCGGAGGC
GATTTATATGTTATTGGTGTGATCGCCGCTTCCCACATTTCAGTGCGTTG
AAAGCACATATTTCGGCCCATTTGGAGAGCGCTAGAAAGTTATGTACCAT
TTGTAATAAAACATTCAGCAAAAAGAGTTCACTGGAAGAACACATCAGAA
CTCATACGGGTAATAACCACTGACCTTTATATACCCCTGGACCAAGTTAT
ATCCGCCATCAATTTTTTGAATTGGTACCCGTAAAGAAGCCATTGCAGTG
TTCAAAATGAACGTTTAACGGCGCTACATCATCAAAAGTATTCCAGGAAA
AATAAATCTAGCGCTCTCAATTCATTTACACCGCTATTGAGTAGTGCCAC
CATTAGGGTACCACTTTTCAAAAAACTCCGATCAAAGATTTTTCTTGGCC
GGGATTGAGAAGCTTGGTCCAGGGTTTATTAAAGGTCAGTGATAATAACA
CTGATCTCTTTCGTAGGGGATCTCTACATATATTTTCTAATCTACTACCC
ATGTATGTTGAATATAAAATAATATAATAGACCTTTTCATAAAATAACAG
CACGAACAACATCTGCCTCGTTTTCAAACAATCACCAAGATGATCATATC
TTATGCGGCCTAAAATGACACATCTTTCAATGAAGTCGAGTTTTGATGAA
CTCCATTTGGTATTAAAAAGGGGCCAGTAGAAGTTCACAATGTAATTTAT
GAAAAGGCCCATTAAAGTCCTCCTGCAGATTCAACAGTGATATAGTGGAA
TCCATCTGATAAAAATTGTTCCTCTTATTTTATTTCAGGTGAGCGACCAT
ACAAATGCAACCAGTGTGGAAAAACGTTCGTTACATCAGGAAAGCTGACA
TCACATTTGAAAATACACGCCGGCATTTACGCCCATCACTGCCAATTGTG
TGGAAAGAAATTCCGCGAACAGTAAGTTGTAGTCATCGTCATATTCCTTT
AGAAGAGGAAAATATAGAAAACTCTGAACTAGAAAAATATATCCCATTTT
GTACGAGTAAAAGTGTGATAACTGGTTTATCGTCAACTTGAAAAATATTA
AAAAACTTTTCTGGGGCCTGGACTTCCCGAGTTATTTTTTTCCGAGTTAT
TTTTCATGTGACCTCATAAATCACAAAATATGGTAAGTTTTGTTTTCTAG
CTTTTAACTTTTCGAGTTATTTGGTGTTTTTTAACTCAGTTTTTTTTTCG
TGCCTTTAACTTTTTGAGTTATTAGATAAATTTTAACTAGGGTTTTTTTC
TTGGCCTCGATTTATGGAAAATTCGACTATGGGTTTGTTTCGTGAAGGGA
CAGATTTGTGTTAAATATATCAACAAAAAACTCGAAAAGTTAGAACAAAA
CCGAGTATGCGTATTGGAAGTGAAAAGAAAAGGAGATTGTACAAAAATTT
TATTTCTCGCTTACCAGACCCCTTTTTTGAACGAGGTCTTGTTTTTTTAC
CGCATATGAAAATGCACGAGAGGCGTGCTCAAGAGGAGAAGGAACCTAAA
AAGTGTATTTTACTTCATAGCTACAATTTGAAGATGCATATGAAAATGCA
CGAGAGGCGTGCTCAAGAGGAGAAGGAACCTAAAAAAACAAAGATGTGGA
ACTGTAAGGAATGCGAGGCGGGTTTCACGCGCAAAGAAGACTTGAATTCT
CACAAGAAGGAAGATCATAAAACACCACATCAACTCATGTTAGAAGAACG
CAAACTAAAGAGAAAAGCTGAAGAAAAAGAAAAAGCAGGTATCTAGTCTA
GGCTAGTTTTTTTTTTTCTTTAAACAGACCTGATTTACAGTTTACGCTCT
TTAATTTGATTTTCAAGGGGAATAGCATTTTCATCGAATAAGGGTAAGGG
AGGGTATTGAAGTGTAGAGCTTTGTCTGTAAGAGTTTCTTGTTGACGGTG
ACTTTCAATATGATCGAATAAGGGAGCGTATCGAATAGTAGAGCGTCGTT
TATGAGAGTTTCTTGTTGACGGTGACTTTCAATATGATCGAATAAAAGAG
CGTATTGAATAGTGCAACGTCGAATTAGAGAGCGTCGATCGTCGTTGACG
GGGGGGGGGGGGTCCAAAANTCCTTCACTCTGTTTTAAAAAGGGTTGTAC
GCGCTCCAGAACTCTCACGTCCCTTCACTCTGTTTTAAAAAGGGTTGTAC
GCGCTCCAGAACTCTCACGTTCCTTCACTCAGTTTTAAAAAGGGTTGTAC
GCGCTCCAGAACTCTCACGTTCCTTCACTCTGTTTTAAAAAGGGTTGTAC
GCGCTTCAGAACTCTCACGTTCCTTCACTCTGTTTTAAAAAGGGTTGTAC
GCGCTCCAGAACTCTCACGTTCCTTCACTCTGTTTTAAAAAGGGTTGTAC
GCGCTCCAGAACTCTCACGTTCCTTCACTCAGTTTACAAAGCAAAGAGAG
AGACAAAAGTCAACAATCGTGTACAAAATGAACAGTAAATCTTTCATTAT
TCGTTGAGCTCGGTAAATATGTTGATCTATTATTATTCTCTGATTATGTT
TTTCTTCTCTTTGCATTCATAGTAAATGAGGATGGTGTATCAGCCGCCAA
GAAACGAACTTTGAGAACAACCGGCTTCACCCAAAAAGAAGGTCAGTTTG
CCCGTCATAATAGTATTGATTCTCATTTTTTTTAAGAGATAAAATAAACT
CTTGGATGGAAGATGAAGCCATTTATTCCCTATTTGACTGGTTTTCACAA
AAACACCGGATTGAAAATAAAATATGTCGCCATATTTCAAAAATAGGAAA
ACTAAGAAAGCGCGTCGTTTTTAATCTGTCATTCTAAATAAGGCGTATAT
CTTATGTTTTTACTTTTTCTTGCTTGAGAAAGAGTTAAGATTCCAATCTA
CCCCATTAAACTCTATGATTGCTTCGGCCCACTGTAAGATTATAATAAGG
TCCTCCAAATAAACGAAATCTGCGTGGAAAAGATGCTACTAAGCTCAGCT
ACGGGGGGGGGGGGGGGGGAAAAAGGGGGGGGGGGNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACAGTAAAT
CTTTCATTATTCGTTGAGCTCGGTAAATATGTTGATCTATTATTAGTCTC
TGATTATGTTTTTCTTCTCTTTGCATTCATAGTAAATGAGGATGGTGTAT
CAGCCGCCAAGAAACGAACATTGAGAACAACCGGCTTCACCCAAAAAGAA
GGTCAGTTTGCCCGTCGGTAGGCAAAAATGGGTGCTGGGTATGTGCGGAC
GATAAGGGTCGGTTTTTTTACCTTCCAAAGTCTCTCTAAGGTTTACAAAA
ACCAGAAAATTTCAAAGTAATCCCTCTAAGGGTCGGAAAATTAACTATTT
TTAGGAAACTTTTTGATGAGAGAAAAAATTGTAAGAAAGTCTCCCTAAGG
GTAAGACATTTTTCCAAAAAGTCTCTTCAGGCACTTTTTCGATAGAAATT
AGAAACTAGTTCTATCTAAGGGTCGGTTTTCGGAGGTCCCGTCGGCACAT
ATTCCTCATCCGCCAACCCTAGTACCCCCCCCCTTTAAACAAACAACACA
ACACAAACACATCTCAGATTATCCAAATTCTCCAAATTTCCGAATCTCTT
TTATAGATGGCACATATGTTTGCGATTTATGTCAAAAAGAATTCGTAAAG
AAGGATTACCTGAACCGTCATTTAAGACGTCACGAATCAAGCACCGCTAC
GGATTGCGGAGAATGCGGGAAGACGTACCGAGATAAACCAACTATGCGAC
AACACATGGTTGATGCGCACGGAAGCGAAGCGAAACACTATTGCAATATA
TGTAAGCAAGGCTTTGTTATTTTGTCAACCTTACAACGTCACATGCGGAT
CCATCTCGATTCACGTCCGTTTACTTGCGATCAATGTCCGGGTACTTACA
AATCGAAAGAGGATTTAAGGCGCCATAAGCGGACCCACGAGGCCGACCGC
CCGTACAAATGCGATATTTGTCATAATGGATTTGTTGATAAATCAGGGCT
GAACCGTCATATGCGGATTCATACCGGTGAAAAACCATTCACGTGTCCGG
ATTGCGGGCAGTCGTTTACTCAATGTGGAACCATGAAACTCCACCGTGCT
AAGAGACATCCCAATAGCACTATCGAGCTTACGGACCTTCGTTCCGGTGC
ACGAATTGCCGCCGAGATGACGACGAAAACCGCCACTGATGAAGACACTC
CGAAAATTCCCGAAAAATCTGACCCTGATGAAGAAGTCACAGAGTCGGAA
GACGAAACTGCTCCTACCACGGAAAACTCCAAGTTTAGTACGGTTCAAGA
ACTCTTGAATTGGATTGGTCAAAATCAGAATTCAGAACAGAATACGTCAT
ACGAAATGTAGTGTGACTTGATTCTGAAAAGGTACAACAACTGTGTATTG
TTTAGATTCAGANTTCATACGAAATGTAGTGAGACTTGATTCTGAAAAGG
TACAATAATTGTGTATGGTTTAGATTCAGAGATTACCAATTTCCCATCAT
TTTTCCATTTTGTGCAGACGAACGATTGAATGAGCTTGATACTCTGGAAA
TGACTCGGAAAATGTTTTTCGAGGAATGAGACATTTTCATTCGTATGTGT
ATCAGATATTCTCTCTACATTTTTTAGGCGTACAAACTTTCGCTAGGTCG
AGAAATCGCGAAATTTACGAAAATTTATTTTCGTGAATTGGGCGAAAAAT
GTTCTTTCAATCAAGAAAAGTTTCACACGAAAAAATGGCTTAGAGTGACA
AACATTTCTTGAATTGAAAGTAAAACTTCCTTATTATGAGGATTAAGCAG
GTTAAAGAGCGCCATAAATGTTACATTTTATTTTAAGTTAGAAGTTTATA
GATTTTCTATTTTGTTTAGATATTTCGCGAGCATCATAAACTTTTGCGAA
TGGCCTTTTAAGAATTTTAGAGACATTTACTTTCGCGAAAAGAGCTAAAA
TTCGCGAAAATTGCGAAAGTTTCTGTTCGCGAAAGTTTGTACGTACGCCT
GAAGTAAGCCCAACGACCATATTTCATACAGAAAATATTCATCTTTCTTG
ATGTATGATAAAGTCTTTTACTATGTTATCAAATCAGGTGTCAGTAAAAT
TACAAAGACGCGAATAACCATTGATACAGTTTGGTAAGATGGCGATCAAA
TTCGAAATTGAAGAAGATGTTATTAATGACGGCTTCTTTGAAAAGGACTA
GTAAATTGTCTAAACTTTCATAGGTACTTTTTATTGATTTATTTGTAATG
ATTAGTTACATGTTTGGACCAAAAAGGACGGTGGCCCATAATGCTCACGG
CGTACTTCCAGTTCTGACACACCTCTAGGCTGCTGGCATCCACTAACGGA
TTCGTGTTCCTTATACCTGGGGTTTTGTAGAGGTCTGCGATTCAGACTAA
CACACTTCCAGTTCACAAATTTTACAAGTGCTGGAAGTGTCTTGTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005448XLOC_005448Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009746-exon-sc0000098-1575043694:432557..432588TCONS_00009746-exon-sc0000098-1575043694:432557..432588Clytia hemisphaericaexon
TCONS_00009746-exon-sc0000098-1575043694:428496..428567TCONS_00009746-exon-sc0000098-1575043694:428496..428567Clytia hemisphaericaexon
TCONS_00009746-exon-sc0000098-1575043694:426480..426671TCONS_00009746-exon-sc0000098-1575043694:426480..426671Clytia hemisphaericaexon
TCONS_00009746-exon-sc0000098-1575043694:425718..425850TCONS_00009746-exon-sc0000098-1575043694:425718..425850Clytia hemisphaericaexon
TCONS_00009746-exon-sc0000098-1575043694:424901..425118TCONS_00009746-exon-sc0000098-1575043694:424901..425118Clytia hemisphaericaexon
TCONS_00009746-exon-sc0000098-1575043694:424048..424116TCONS_00009746-exon-sc0000098-1575043694:424048..424116Clytia hemisphaericaexon
TCONS_00009746-exon-sc0000098-1575043694:420442..422282TCONS_00009746-exon-sc0000098-1575043694:420442..422282Clytia hemisphaericaexon
TCONS_00009746-exon-sc0000098-1510915933:432557..432588TCONS_00009746-exon-sc0000098-1510915933:432557..432588Clytia hemisphaericaexon
TCONS_00009746-exon-sc0000098-1510915933:428496..428567TCONS_00009746-exon-sc0000098-1510915933:428496..428567Clytia hemisphaericaexon
TCONS_00009746-exon-sc0000098-1510915933:426480..426671TCONS_00009746-exon-sc0000098-1510915933:426480..426671Clytia hemisphaericaexon
TCONS_00009746-exon-sc0000098-1510915933:425718..425850TCONS_00009746-exon-sc0000098-1510915933:425718..425850Clytia hemisphaericaexon
TCONS_00009746-exon-sc0000098-1510915933:424901..425118TCONS_00009746-exon-sc0000098-1510915933:424901..425118Clytia hemisphaericaexon
TCONS_00009746-exon-sc0000098-1510915933:424048..424116TCONS_00009746-exon-sc0000098-1510915933:424048..424116Clytia hemisphaericaexon
TCONS_00009746-exon-sc0000098-1510915933:420442..422282TCONS_00009746-exon-sc0000098-1510915933:420442..422282Clytia hemisphaericaexon
TCONS_00009746-exon-sc0000098-1491911889:432557..432588TCONS_00009746-exon-sc0000098-1491911889:432557..432588Clytia hemisphaericaexon
TCONS_00009746-exon-sc0000098-1491911889:428496..428567TCONS_00009746-exon-sc0000098-1491911889:428496..428567Clytia hemisphaericaexon
TCONS_00009746-exon-sc0000098-1491911889:426480..426671TCONS_00009746-exon-sc0000098-1491911889:426480..426671Clytia hemisphaericaexon
TCONS_00009746-exon-sc0000098-1491911889:425718..425850TCONS_00009746-exon-sc0000098-1491911889:425718..425850Clytia hemisphaericaexon
TCONS_00009746-exon-sc0000098-1491911889:424901..425118TCONS_00009746-exon-sc0000098-1491911889:424901..425118Clytia hemisphaericaexon
TCONS_00009746-exon-sc0000098-1491911889:424048..424116TCONS_00009746-exon-sc0000098-1491911889:424048..424116Clytia hemisphaericaexon
TCONS_00009746-exon-sc0000098-1491911889:420442..422282TCONS_00009746-exon-sc0000098-1491911889:420442..422282Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000098supercontigsc0000098:420442..432588 -
Expression
No biomaterial libraries express this feature.
Blast
[Close]
BLAST of TCONS_00009746 vs. Swiss-Prot (Human)
Match: ZN112 (Zinc finger protein 112 OS=Homo sapiens GN=ZNF112 PE=1 SV=2)

HSP 1 Score: 209.92 bits (533), Expect = 1.170e-56
Identity = 120/373 (32.17%), Postives = 181/373 (48.53%), Query Frame = 2 
Query:   92 SRLGVPQNQYHDYRRRFICYWCDRRFPHFSALKAHISAHLESARKLCTICNKTFSKKSSLEEHIRTHTGERPYKCNQCGKTFVTSGKLTSHLKIHAGIYAHHCQLCGKKFREHYNLKMHMKMHERRAQEEKEPKKTKMWNCKECEAGFTRKEDLNSHKK-EDHKTPHQLMXXXXXXXXXXXXXXXXVNEDGVSAAKKRTLRTTGFTQKEDGTYVCDLCQKEFVKKDYLNRHLRRHESSTATDCGECGKTYRDKPTMRQHMVDAHGSEAKHYCNICKQGFVILSTLQRHMRIHLDSRPFTCDQCPGTYKSKEDLRRHKRTHEADRPYKCDICHNGFVDKSGLNRHMRIHTGEKPFTCPDCGQSFTQCGTMKLHR 1207
            S L V Q + H   + + C  CD+ F   S L+AH   H       C  C K FS+ S L+ H R HTGE+PYKC +CGK F  S  L  H ++H G     C+ CGK F   +NL++H ++H             K + C+EC  GF++   L +H++    + P+Q                   +E G S +++  L++       +  Y+C++C K F ++ YL  H R H       C  CGK +     +  H    H     + C +C +GF   S LQ H R+H++ RP+ C+QC   +     L+ H R H  ++PYKC++C  GF  +S L  H R+HTGEKP+ C  CG+ F     + +H+
Sbjct:  538 SVLNVHQ-RVHTGEKPYKCEECDKGFSRSSYLQAHQRVHTGEKPYKCEECGKGFSRNSYLQGHQRVHTGEKPYKCEECGKGFSRSSHLQGHQRVHTGEKPFKCEECGKGFSWSFNLQIHQRVH----------TGEKPYKCEECGKGFSKASTLLAHQRVHTGEKPYQ------------------CDECGKSFSQRSYLQSHQSVHSGERPYICEVCGKGFSQRAYLQGHQRVHTRVKPYKCEMCGKGFSQSSRLEAHR-RVHTGGKPYKCEVCTKGFSESSRLQAHQRVHVEGRPYKCEQCGKGFSGYSSLQAHHRVHTGEKPYKCEVCGKGFSQRSNLQAHQRVHTGEKPYKCDACGKGFRWSSGLLIHQ 880

HSP 2 Score: 138.658 bits (348), Expect = 1.707e-33
Identity = 90/318 (28.30%), Postives = 134/318 (42.14%), Query Frame = 2 
Query:  122 HDYRRRFICYWCDRRFPHFSALKAHISAHLESARKLCTICNKTFSKKSSLEEHIRTHTGERPYKCNQCGKTFVTSGKLTSHLKIHAGIYAHHCQLCGKKFREHYNLKMHMKMHERRAQEEKEPKKTKMWNCKECEAGFTRKEDLNSHKKEDHKTPHQLMXXXXXXXXXXXXXXXXVNEDGVSAAKKRTLRTTGFTQKEDGTYVCDLCQKEFVKKDYLNRHLRRHESSTATDCGECGKTYRDKPTMRQHMVDAHGSEAKHYCNICKQGFVILSTLQRHMRIHLDSRPFTCDQCPGTYKSKEDLRRHKRTHEADRPYKCD 1075
            H   + F C  C + F     L+ H   H       C  C K FSK S+L  H R HTGE+PY+C++CGK+F     L SH  +H+G   + C++CGK F +   L+ H ++H R           K + C+ C  GF++   L +H                                       R + T G        Y C++C K F +   L  H R H       C +CGK +    +++ H    H  E  + C +C +GF   S LQ H R+H   +P+ CD C   ++    L  H+R H +D+ YK +
Sbjct:  631 HTGEKPFKCEECGKGFSWSFNLQIHQRVHTGEKPYKCEECGKGFSKASTLLAHQRVHTGEKPYQCDECGKSFSQRSYLQSHQSVHSGERPYICEVCGKGFSQRAYLQGHQRVHTR----------VKPYKCEMCGKGFSQSSRLEAH---------------------------------------RRVHTGG------KPYKCEVCTKGFSESSRLQAHQRVHVEGRPYKCEQCGKGFSGYSSLQAHH-RVHTGEKPYKCEVCGKGFSQRSNLQAHQRVHTGEKPYKCDACGKGFRWSSGLLIHQRVHSSDKFYKSE 892

HSP 3 Score: 136.732 bits (343), Expect = 8.135e-33
Identity = 103/365 (28.22%), Postives = 148/365 (40.55%), Query Frame = 2 
Query:  125 DYRRRFICYWCDRRFPHFSALKAHISAHLESARKLCTICNKTFSKKSSLEEHIRTHTGERPYKCNQCGKTFVTSGKLTSHLKIHAGIYAHHCQLCGKKFREH---YNLKMHMKMHERRAQEEKEPKKTKMWNCKECEAGFTRKEDLNSHKKEDHKTPHQLMXXXXXXXXXXXXXXXXVNEDGVSAAKKRTLRTTGFTQKEDGTYVCDLCQKEFVKKDYLNRHLRRHESSTATDCGECGKTYRDKPTMRQHMVDAHGSEAKHYCNICKQGFVILSTLQRHMRIHLDSRPFTCDQCPGTYKSKEDLRRHKRTHEADRPYKCDICHNGFVDKSGLNRHMRIHTGEKPFTCPDCGQSFTQCGTMKLHRA 1210
            +Y + FIC          S L      H+E        C   FS  S  ++    HT E+PYK   C  +F  +  L  H KIH G          K  +EH   +N    +K H+R    +K       + C  C  GF  +  LN H++                               V   +K               Y C+ C K F +  YL  H R H       C ECGK +     ++ H    H  E  + C  C +GF   S LQ H R+H   +PF C++C   +    +L+ H+R H  ++PYKC+ C  GF   S L  H R+HTGEKP+ C +CG+SF+Q   ++ H++
Sbjct:  419 EYGKSFICS---------SNLDIQHRVHMEENSYNSEECGNGFSLASHFQDLQIVHTKEQPYKRYVCSNSFSHNLYLQGHPKIHIG---------EKPRKEHGNGFNWSSKLKDHQRVHTGQKP------YKCNICGKGFNHRSVLNVHQR-------------------------------VHTGEK--------------PYKCEECDKGFSRSSYLQAHQRVHTGEKPYKCEECGKGFSRNSYLQGHQ-RVHTGEKPYKCEECGKGFSRSSHLQGHQRVHTGEKPFKCEECGKGFSWSFNLQIHQRVHTGEKPYKCEECGKGFSKASTLLAHQRVHTGEKPYQCDECGKSFSQRSYLQSHQS 713
The following BLAST results are available for this feature:
BLAST of TCONS_00009746 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZN1121.170e-5632.17Zinc finger protein 112 OS=Homo sapiens GN=ZNF112 ... [more]
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