TCONS_00009747 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009747
Unique NameTCONS_00009747
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2559

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009747 ID=TCONS_00009747|Name=TCONS_00009747|organism=Clytia hemisphaerica|type=transcript|length=2559bp
CAAAATCTTGTACGAAGTGTCTCCTTGAATCTAGACCCAAAGAATACGAC
GCCGCCAACGACGACGGCGACAACAAAGAAAATACCAAGGAACAGTCGTT
TAGGCGtGCCTCAAAATCAATACCATGACTACCGGAGGCGATTTATATGT
TATTGGTGTGATCGCCGCTTCCCACATTTCAGTGCGTTGAAAGCACATAT
TTCGGCCCATTTGGAGAGCGCTAGAAAGTTATGTACCATTTGTAATAAAA
CATTCAGCAAAAAGAGTTCACTGGAAGAACACATCAGAACTCATACGGGT
GAGCGACCATACAAATGCAACCAGTGTGGAAAAACGTTCGTTACATCAGG
AAAGCTGACATCACATTTGAAAATACACGCCGGCATTTACGCCCATCACT
GCCAATTGTGTGGAAAGAAATTCCGCGAACACTACAATTTGAAGATGCAT
ATGAAAATGCACGAGAGGCGTGCTCAAGAGGAGAAGGAacctaaaaaaac
aaagatgTGGAACTGTAAGGAATGCGAGGCGGGTTTCACGCGCAAAGAAG
ACTTGAATTCTCACAAGAAGGAAGATCATAAAACACCACATCAACTCATG
TTAGAAGAACGCAAACTAAAGAGAAAagctgaagaaaaagaaaaagcagT
AAATGAGGATGGTGTATCAGCCGCCAAGAAACGAACATTGAGAACAACCG
GCTTCACCCAAAAAGAAGATGGCACATATGTTTGCGATTTATGTCAAAAA
GAATTCGTAAAGAAGGATTACCTGAACCGTCATTTAAGACGTCACGAATC
AAGCACCGCTACGGATTGCGGAGAATGCGGGAAGACGTACCGAGATAAAC
CAACTATGCGACAACACATGGTTGATGCGCACGGAAGCGAAGCGAAACAC
TATTGCAATATATGTAAGCAAGGCTTTGTTATTTTGTCAACCTTACAACG
TCACATGCGGATCCATCTCGATTCACGTCCGTTTACTTGCGATCAATGTC
CGGGTACTTACAAATCGAAAGAGGATTTAAGGCGCCATAAGCGGACCCAC
GAGGCCGACCGCCCGTACAAATGCGATATTTGTCATAATGGATTTGTTGA
TAAATCAGGGCTGAACCGTCATATGCGGATTCATACCGGTGAAAAACCAT
TCACGTGTCCGGATTGCGGGCAGTCGTTTACTCAATGTGGAACCATGAAA
CTCCACCGTGCTAAGAGACATCCCAATAGCACTATCGAGCTTACGGACCT
TCGTTCCGGTGCACGAATTGCCGCCGAGATGACGACGAAAACCGCCACTG
ATGAAGACACTCCGAAAATTCCCGAAAAATCTGACCCTGATGAAGAAGTC
ACAGAGTCGGAAGACGAAACTGCTCCTACCACGGAAAACTCCAAGTTTAG
TACGGTTCAAGAACTCTTGAATTGGATTGGTCAAAATCAGAATTCAGAAC
AGAATACGTCATACGAAATGTAGTGTGACTTGATTCTGAAAAGGTACAAC
AACTGTGTATTGTTTAGATTCAGANTTCATACGAAATGTAGTGAGACTTG
ATTCTGAAAAGGTACAATAATTGTGTATGGTTTAGATTCAGAGATTACCA
ATTTCCcatcatttttccattttgtgcAGACGAACGATTGAATGAGCTTG
ATACTCTGGAAATGACTCGGAAAATGTTTTTCGAGGAATGAGACATTTTC
ATTCGTATGTGTATCAGATATTCTCTCTACAttttttaggcgtacaaact
ttcgctaGGTCgagaaatcgcgaaatttacgaaaatttattttcgtgAAT
TGGGCGAAAAATGTTCTTTCAATCAAGAAAAGTTTCACacgaaaaaatgg
cttagagtgACAAACATTTCTTGAATTGAAAGTAAAACTTCCTTATTATG
AGGATTAAGCAGGTTAAAGAGCGCCATAAatgttacattttattttaagt
tagaagtttatagattttctattttgtttagATATTTCGCGAGCatcata
aacttttgcgaatggccttttaagaattttagagacatttactttcgcga
aaagagctaaaattcgcgaaaattgcgaaagtttctgttcgcgaaagttt
gtacgtaCGCCTGAAGTAAGCCCAACGACCATATTTCATACAGAAAATAT
TCATCTTTCTTGATGTATGATAAAGTCTTTTACTATGTTATCAAATCAGG
TGTCAGTAAAATTACAAAGACGCGAATAACCATTGATACAGTTTGGTAAG
ATGGCGATCAAATTCGAAATTGAAGAAGATGTTATTAATGACGGCTTCTT
TGAAAAGGACTAGTAAATTGTCTAAACTTTCATAGGTactttttattgat
ttatttgtAATGATTAGTTACATGTTTGGACCAAAAAGGACGGTGGCCCA
TAATGCTCACGGCGTACTTCCAGTTCTGACACACctctaggctgctggca
tccactaacggattcgtgttCCTtatacctggggttttgtagaggtctgc
gattcagactaacaCACTTCCAGTTCACAAATTTTACAAGTGCTGGAAGT
GTCTTGTGA
Run BLAST on NCBI

transcript from alignment at sc0000098:420442..432590-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009747 ID=TCONS_00009747|Name=TCONS_00009747|organism=Clytia hemisphaerica|type=transcript|length=12149bp|location=Sequence derived from alignment at sc0000098:420442..432590- (Clytia hemisphaerica)
CAAAATCTTGTACGAAGTGTCTCCTTGAATCTAGGTTAGTAGCAATCTTT
TGTAAGTGTGAACATAATGATGTCAAAGAATGTCTCCAAAATCTTGTACG
AAGTGTCTCCTTGAATCTAGGTTAGTAGCAATCATTTGTAAGTGTGAACA
TAATGATGTCAAAGAATGTCTCCAAAATCTTGTACCAAGAGTCTCCTTGA
ATCTATAGAAATATGTTCTAAATGTGAACAATAGTTACACCCCTGTGTCA
CAGACCCGGTGGGATCCTTCCCCACTGGAAAACTTTGCCAAAATTTCGTC
CACTGTGGGAAAAATAACCTACAATTTCGATCCAACTGGAAAATTGACTT
TTAGTATAAATTTAATCTCCATTCAATGGAAAAAGTTGCAATCCAAAAGT
ATCTCAATTAAATTTTTTACCTGAGAATGATTTCTATTGATTATTATTCA
AAAAACATTTCAACAAATATTTTTCAGCATAAGCTTTTCGTTTTATTAAA
AAACATCATCAGTGCATATACAAGTAAAACGTTCAAAATAAAATGNACGG
AAACAAACTTTTTGGGTAATTCGAACAGGTTTTCGGGTATGATCATATCA
TTCTGCTCTTTTTCATGAAAAATCTTAACAACACTTGCTACAAATCTTGA
AGGGAAACCAGCTCTTTCAAACTTATCAACTACAATTTCCTTTTCCATTG
AAAAATCTGATGCAATATTCTTTGTTCGATGTAGGTCAACATTCACAGCA
TTTCGCTTGAACTTTTTGGGAATTTTTGATGACCAATGGACTGGAACCTT
TTTATCACTCCGAAATACTGATGTGCTAATTTCGCCATTTTCATACGTTA
ATTTGGTGTCAAGGGATTTTTCGGGTTTCACTTCAACTGTGAACTTGATA
TTTGGATGATAGTTATTCAGACTCTCGAGAAGGGTATCCGGTTCATCTTT
ATGTCGTTTGATTATTAAATCATCGACAAACCTTTTGTAAAACTCTGGTT
CGGTAGGGGTTATGACATCTTTTTCCAACTTTGTCATGTAAATGTATCGA
AAGTAACTGACAATGGACCACCCATAGTGCAGCCATCGATCTGTTTGTAA
AATTTGTCGTTGAACATAAAAAGACTATCAGTGGATAATTTTAGAAGTAA
ACGCTTGAAAACTGTTTTTGAAGCAATTGGTTTGAATTTCTTTCTATTGT
AGATTTTGTCAATAATATAATCGATAGTTGGACGTACCGGAACATTTGTA
AATAGACTTTCAACATCGTACGAAACAAACTCCTCCGAATCATTCAATCG
CGGTAAATTTCTTATCATTGAAGGGAATTTTTGAGTGTTTTTGATCACGT
AGTCATTTTCGTCAACCAAAGGTTTTAAGTAGTTTGCGATAACTTGAGAC
GCGTTGTATGTTGCAGTACCAACTTGAGCGATAATAGGACGAAACTTCAA
GTCGTTTACGTTGATTTCCGTATTGCTTTTGAACTGGTTGATTTGATGAC
GGTATCATGTCTTTATATTTTTCAAACTTTTTGAAATTTCTGTAGAGGAA
ACTTTTGAATTTTTTGAGGTCTTCCATGGTAGTATCAGTTGAATTTTTGT
AAACACCTTTTGTGATTCCTTCATCGACCATACTTTGAAGTNTTTTCTCA
AACTTTTAAAAAAAGTTTGTCATAACCCCTACCGAACCAGAGTTTTACAA
AAGGTTTGTCGATGATTCAATAACCAAACGACATAAAGATGAACCGGATA
CCCTTCTCGAGAGTCTGAATAACTATCACCCAAATATCAAGTTCACAGTT
GAAGTGAAACCCGAAAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTGTATATGCACTGATGA
TGTTTTTTAATAAAACGAAAAGCTTATGCTGAAAAATATTTGTTGAAATG
TTTTTTGAATAATAATTAATTTTCTGGCTATATTTTTTTACAACAACGAT
TTCTATTGACTGAAAGCTATTTTGATGATCAAGAAGTGTTACTGGTAACA
GATAAATTTATAGGTCATTGCGTTATGGATTGTATCTAGTCCGTATAAAA
CACCCTGGTCTGGAAGGCTATTGTTGTAACTTTTTGTTAACATTTCCCTT
TGTTTAATAACGATTATAAAAATCGATTTGCTCAGTTTTTGATCACGTTA
CCAAATACTCCTCCTGAGATTGGTTCAAAAGTTGATCACATGATCAGAAA
ATGAGCAAACCAAACTAATTTATCAACGCAAGTTCAAATTCGAAACAATA
GAAAGAACCAAAAGGCTTCCAAACCGGGGTTTCTTATACGGACTATGATC
TAGCATTCATGTTTTCGTTTCAGACCCAAAGAATACGACGCCGCCAACGA
CGACGGCGACAACAAAGAAAATACCAAGGAACAGTCGTTTAGGCGGTAAA
TCTATGTAGTTTTGTAGTTTTCGTCCATTGAGTTTAAAGCCCGAAGGGCT
AGAGTAGAANGGTAAATCTATGTAGTTTTCGTCCATTGAGTTTAAAGCCT
GAAGGGCTAGAGTAGAATCTCTAAACCTTTCCGAGGCAAGAAAAAGTGAA
GCCACTTACTTCCCATCCAGGAGTCTCGAGTCTAGCCCTTCGGGCTTGGA
AGTGAATGTTTTCGCCATCATGGAAGTAAATGTTCGAATCTGTACGCAAA
TCGAACGTTTGCTTCCATAATGGCGAAATCACGAAACTTAACAAAACATA
AAAAAACATTGACACTTATCAAGCCTTTTAAGGACGCGGAAAGATTTTCT
AAAAACAAATTGAAGAATCTTGATTTCTTTTTCTCTTTTTTGGTTGGAAA
AAATAGTCCACCTAAAGCTTTTTGATAGACTGGATGGTACGATCATTTGG
CCCCTTCTTGGTATATGATAGCTTTCAATTTTTGTTTTTTTGCCTCTACA
ATCAGTGCCATAACATGTTGGCACTTTTGGCTAATTTACCATTTTTGGAA
AATTGAAGTTCGAGCGAGAATGTAAATTTCAGGCCTTAAACTTGATTTCA
TCGATTATTTCGATCTGGGAGGGATTTATTGGTTTCTAGGCTATATTTCA
AGCCCTACTGGACCATTTTTGAACTTTTGGATCCTTAGATCCTAAGGTCC
TAAGTTTTAAGTCTAGCGTTAAAACTCAGAGTTAAAACTCTACCTTTCGA
ACCTACTTTAGAGCACTTATAAATCGATTGTGGTTTCAAAACTTCCCAGT
GGATTTCCCTTTTGTGCCATGTATTTTGTCACTGATTGTAGTTGTTTTTG
AAAGGTAACAAGGGGGTGAAGGGACCTTTTTGTTTGAAAATAAGGAATTG
CAAATTTTATTTATCAACTTCGAGCACTTTTTTTGTTACTTTGGATTTGT
GCGTTTTTTGTTTTCCAAAATGGTGATCTCACCAAGTCTAAGTCTACTTA
AACTTGACTCGGCGTCATCAAAAAATATCAATAAGCAAATTTCAGCCTGA
AGTAGACTCCAGTAGAAAGGAAAATGGAGGTCGAAACTAGTAACCGAGGA
GCATTTTGATGCCCCTAACATTTCGCTTCCCTCACAAAAAAGCTACTAGA
CCCTACAGTTGACTTTCTCTAATTCGATCTTCGCTGGACCAAAAATTCTC
TTCCAATTACAAAGAGATTCGAATTATAGAGAGTATTTTAGGTGGCTTGC
TCATTGACGGGTTCTGAGAATTAGTTTGAATTAGAGAAAGATTCGAATAT
GAGAAGTTCGAATAAACTGTCACCCACCATGACTGGGCAACAAAAAAAAT
GTTCACCCTCTAAATGTTCAAAATAGATGCCACTTTAATGGACTAAAATA
TTCTAACTTGATTTTGACTTGTTAGAATCATTGCATTAATATTTTCAATC
TTTTGTACCGTCATTTCTCCATTTTAGAAGATTGAGTTTGAAAAATCAAT
TTGAAATTGAGTTTTTGCCACCGAATAACGGTGGTAAAAAAGTGCTTGAA
AAATACCCTGGGTTACTGTATTCTATTTGTAGGACCACATTCGCATGATT
ACAGGCGGTTCGTTTGTTTTTGGTGTGACCGGCGCTTTACAATCTACAGC
ATGTTTAAAGTTCACGTCGCCTCTCATCTGGAGGCGGTCAGGGTGCCATG
TACAATATGTTCTAAATCATTTACGACAAAGAGTTCCTTGAAAGACCATA
TGCGAACTCACACAGGTAAATACATCACTTTGTTCTTATAAAAAAATGTA
CTTTATTTTTTATTTACAGTGCCTCAAAATCAATACCATGACTACCGGAG
GCGATTTATATGTTATTGGTGTGATCGCCGCTTCCCACATTTCAGTGCGT
TGAAAGCACATATTTCGGCCCATTTGGAGAGCGCTAGAAAGTTATGTACC
ATTTGTAATAAAACATTCAGCAAAAAGAGTTCACTGGAAGAACACATCAG
AACTCATACGGGTAATAACCACTGACCTTTATATACCCCTGGACCAAGTT
ATATCCGCCATCAATTTTTTGAATTGGTACCCGTAAAGAAGCCATTGCAG
TGTTCAAAATGAACGTTTAACGGCGCTACATCATCAAAAGTATTCCAGGA
AAAATAAATCTAGCGCTCTCAATTCATTTACACCGCTATTGAGTAGTGCC
ACCATTAGGGTACCACTTTTCAAAAAACTCCGATCAAAGATTTTTCTTGG
CCGGGATTGAGAAGCTTGGTCCAGGGTTTATTAAAGGTCAGTGATAATAA
CACTGATCTCTTTCGTAGGGGATCTCTACATATATTTTCTAATCTACTAC
CCATGTATGTTGAATATAAAATAATATAATAGACCTTTTCATAAAATAAC
AGCACGAACAACATCTGCCTCGTTTTCAAACAATCACCAAGATGATCATA
TCTTATGCGGCCTAAAATGACACATCTTTCAATGAAGTCGAGTTTTGATG
AACTCCATTTGGTATTAAAAAGGGGCCAGTAGAAGTTCACAATGTAATTT
ATGAAAAGGCCCATTAAAGTCCTCCTGCAGATTCAACAGTGATATAGTGG
AATCCATCTGATAAAAATTGTTCCTCTTATTTTATTTCAGGTGAGCGACC
ATACAAATGCAACCAGTGTGGAAAAACGTTCGTTACATCAGGAAAGCTGA
CATCACATTTGAAAATACACGCCGGCATTTACGCCCATCACTGCCAATTG
TGTGGAAAGAAATTCCGCGAACAGTAAGTTGTAGTCATCGTCATATTCCT
TTAGAAGAGGAAAATATAGAAAACTCTGAACTAGAAAAATATATCCCATT
TTGTACGAGTAAAAGTGTGATAACTGGTTTATCGTCAACTTGAAAAATAT
TAAAAAACTTTTCTGGGGCCTGGACTTCCCGAGTTATTTTTTTCCGAGTT
ATTTTTCATGTGACCTCATAAATCACAAAATATGGTAAGTTTTGTTTTCT
AGCTTTTAACTTTTCGAGTTATTTGGTGTTTTTTAACTCAGTTTTTTTTT
CGTGCCTTTAACTTTTTGAGTTATTAGATAAATTTTAACTAGGGTTTTTT
TCTTGGCCTCGATTTATGGAAAATTCGACTATGGGTTTGTTTCGTGAAGG
GACAGATTTGTGTTAAATATATCAACAAAAAACTCGAAAAGTTAGAACAA
AACCGAGTATGCGTATTGGAAGTGAAAAGAAAAGGAGATTGTACAAAAAT
TTTATTTCTCGCTTACCAGACCCCTTTTTTGAACGAGGTCTTGTTTTTTT
ACCGCATATGAAAATGCACGAGAGGCGTGCTCAAGAGGAGAAGGAACCTA
AAAAGTGTATTTTACTTCATAGCTACAATTTGAAGATGCATATGAAAATG
CACGAGAGGCGTGCTCAAGAGGAGAAGGAACCTAAAAAAACAAAGATGTG
GAACTGTAAGGAATGCGAGGCGGGTTTCACGCGCAAAGAAGACTTGAATT
CTCACAAGAAGGAAGATCATAAAACACCACATCAACTCATGTTAGAAGAA
CGCAAACTAAAGAGAAAAGCTGAAGAAAAAGAAAAAGCAGGTATCTAGTC
TAGGCTAGTTTTTTTTTTTCTTTAAACAGACCTGATTTACAGTTTACGCT
CTTTAATTTGATTTTCAAGGGGAATAGCATTTTCATCGAATAAGGGTAAG
GGAGGGTATTGAAGTGTAGAGCTTTGTCTGTAAGAGTTTCTTGTTGACGG
TGACTTTCAATATGATCGAATAAGGGAGCGTATCGAATAGTAGAGCGTCG
TTTATGAGAGTTTCTTGTTGACGGTGACTTTCAATATGATCGAATAAAAG
AGCGTATTGAATAGTGCAACGTCGAATTAGAGAGCGTCGATCGTCGTTGA
CGGGGGGGGGGGGGTCCAAAANTCCTTCACTCTGTTTTAAAAAGGGTTGT
ACGCGCTCCAGAACTCTCACGTCCCTTCACTCTGTTTTAAAAAGGGTTGT
ACGCGCTCCAGAACTCTCACGTTCCTTCACTCAGTTTTAAAAAGGGTTGT
ACGCGCTCCAGAACTCTCACGTTCCTTCACTCTGTTTTAAAAAGGGTTGT
ACGCGCTTCAGAACTCTCACGTTCCTTCACTCTGTTTTAAAAAGGGTTGT
ACGCGCTCCAGAACTCTCACGTTCCTTCACTCTGTTTTAAAAAGGGTTGT
ACGCGCTCCAGAACTCTCACGTTCCTTCACTCAGTTTACAAAGCAAAGAG
AGAGACAAAAGTCAACAATCGTGTACAAAATGAACAGTAAATCTTTCATT
ATTCGTTGAGCTCGGTAAATATGTTGATCTATTATTATTCTCTGATTATG
TTTTTCTTCTCTTTGCATTCATAGTAAATGAGGATGGTGTATCAGCCGCC
AAGAAACGAACTTTGAGAACAACCGGCTTCACCCAAAAAGAAGGTCAGTT
TGCCCGTCATAATAGTATTGATTCTCATTTTTTTTAAGAGATAAAATAAA
CTCTTGGATGGAAGATGAAGCCATTTATTCCCTATTTGACTGGTTTTCAC
AAAAACACCGGATTGAAAATAAAATATGTCGCCATATTTCAAAAATAGGA
AAACTAAGAAAGCGCGTCGTTTTTAATCTGTCATTCTAAATAAGGCGTAT
ATCTTATGTTTTTACTTTTTCTTGCTTGAGAAAGAGTTAAGATTCCAATC
TACCCCATTAAACTCTATGATTGCTTCGGCCCACTGTAAGATTATAATAA
GGTCCTCCAAATAAACGAAATCTGCGTGGAAAAGATGCTACTAAGCTCAG
CTACGGGGGGGGGGGGGGGGGAAAAAGGGGGGGGGGGNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACAGTAA
ATCTTTCATTATTCGTTGAGCTCGGTAAATATGTTGATCTATTATTAGTC
TCTGATTATGTTTTTCTTCTCTTTGCATTCATAGTAAATGAGGATGGTGT
ATCAGCCGCCAAGAAACGAACATTGAGAACAACCGGCTTCACCCAAAAAG
AAGGTCAGTTTGCCCGTCGGTAGGCAAAAATGGGTGCTGGGTATGTGCGG
ACGATAAGGGTCGGTTTTTTTACCTTCCAAAGTCTCTCTAAGGTTTACAA
AAACCAGAAAATTTCAAAGTAATCCCTCTAAGGGTCGGAAAATTAACTAT
TTTTAGGAAACTTTTTGATGAGAGAAAAAATTGTAAGAAAGTCTCCCTAA
GGGTAAGACATTTTTCCAAAAAGTCTCTTCAGGCACTTTTTCGATAGAAA
TTAGAAACTAGTTCTATCTAAGGGTCGGTTTTCGGAGGTCCCGTCGGCAC
ATATTCCTCATCCGCCAACCCTAGTACCCCCCCCCTTTAAACAAACAACA
CAACACAAACACATCTCAGATTATCCAAATTCTCCAAATTTCCGAATCTC
TTTTATAGATGGCACATATGTTTGCGATTTATGTCAAAAAGAATTCGTAA
AGAAGGATTACCTGAACCGTCATTTAAGACGTCACGAATCAAGCACCGCT
ACGGATTGCGGAGAATGCGGGAAGACGTACCGAGATAAACCAACTATGCG
ACAACACATGGTTGATGCGCACGGAAGCGAAGCGAAACACTATTGCAATA
TATGTAAGCAAGGCTTTGTTATTTTGTCAACCTTACAACGTCACATGCGG
ATCCATCTCGATTCACGTCCGTTTACTTGCGATCAATGTCCGGGTACTTA
CAAATCGAAAGAGGATTTAAGGCGCCATAAGCGGACCCACGAGGCCGACC
GCCCGTACAAATGCGATATTTGTCATAATGGATTTGTTGATAAATCAGGG
CTGAACCGTCATATGCGGATTCATACCGGTGAAAAACCATTCACGTGTCC
GGATTGCGGGCAGTCGTTTACTCAATGTGGAACCATGAAACTCCACCGTG
CTAAGAGACATCCCAATAGCACTATCGAGCTTACGGACCTTCGTTCCGGT
GCACGAATTGCCGCCGAGATGACGACGAAAACCGCCACTGATGAAGACAC
TCCGAAAATTCCCGAAAAATCTGACCCTGATGAAGAAGTCACAGAGTCGG
AAGACGAAACTGCTCCTACCACGGAAAACTCCAAGTTTAGTACGGTTCAA
GAACTCTTGAATTGGATTGGTCAAAATCAGAATTCAGAACAGAATACGTC
ATACGAAATGTAGTGTGACTTGATTCTGAAAAGGTACAACAACTGTGTAT
TGTTTAGATTCAGANTTCATACGAAATGTAGTGAGACTTGATTCTGAAAA
GGTACAATAATTGTGTATGGTTTAGATTCAGAGATTACCAATTTCCCATC
ATTTTTCCATTTTGTGCAGACGAACGATTGAATGAGCTTGATACTCTGGA
AATGACTCGGAAAATGTTTTTCGAGGAATGAGACATTTTCATTCGTATGT
GTATCAGATATTCTCTCTACATTTTTTAGGCGTACAAACTTTCGCTAGGT
CGAGAAATCGCGAAATTTACGAAAATTTATTTTCGTGAATTGGGCGAAAA
ATGTTCTTTCAATCAAGAAAAGTTTCACACGAAAAAATGGCTTAGAGTGA
CAAACATTTCTTGAATTGAAAGTAAAACTTCCTTATTATGAGGATTAAGC
AGGTTAAAGAGCGCCATAAATGTTACATTTTATTTTAAGTTAGAAGTTTA
TAGATTTTCTATTTTGTTTAGATATTTCGCGAGCATCATAAACTTTTGCG
AATGGCCTTTTAAGAATTTTAGAGACATTTACTTTCGCGAAAAGAGCTAA
AATTCGCGAAAATTGCGAAAGTTTCTGTTCGCGAAAGTTTGTACGTACGC
CTGAAGTAAGCCCAACGACCATATTTCATACAGAAAATATTCATCTTTCT
TGATGTATGATAAAGTCTTTTACTATGTTATCAAATCAGGTGTCAGTAAA
ATTACAAAGACGCGAATAACCATTGATACAGTTTGGTAAGATGGCGATCA
AATTCGAAATTGAAGAAGATGTTATTAATGACGGCTTCTTTGAAAAGGAC
TAGTAAATTGTCTAAACTTTCATAGGTACTTTTTATTGATTTATTTGTAA
TGATTAGTTACATGTTTGGACCAAAAAGGACGGTGGCCCATAATGCTCAC
GGCGTACTTCCAGTTCTGACACACCTCTAGGCTGCTGGCATCCACTAACG
GATTCGTGTTCCTTATACCTGGGGTTTTGTAGAGGTCTGCGATTCAGACT
AACACACTTCCAGTTCACAAATTTTACAAGTGCTGGAAGTGTCTTGTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005448XLOC_005448Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009747-exon-sc0000098-1575043694:432557..432590TCONS_00009747-exon-sc0000098-1575043694:432557..432590Clytia hemisphaericaexon
TCONS_00009747-exon-sc0000098-1575043694:428496..428567TCONS_00009747-exon-sc0000098-1575043694:428496..428567Clytia hemisphaericaexon
TCONS_00009747-exon-sc0000098-1575043694:426480..426671TCONS_00009747-exon-sc0000098-1575043694:426480..426671Clytia hemisphaericaexon
TCONS_00009747-exon-sc0000098-1575043694:425718..425850TCONS_00009747-exon-sc0000098-1575043694:425718..425850Clytia hemisphaericaexon
TCONS_00009747-exon-sc0000098-1575043694:424901..425118TCONS_00009747-exon-sc0000098-1575043694:424901..425118Clytia hemisphaericaexon
TCONS_00009747-exon-sc0000098-1575043694:422688..422756TCONS_00009747-exon-sc0000098-1575043694:422688..422756Clytia hemisphaericaexon
TCONS_00009747-exon-sc0000098-1575043694:420442..422282TCONS_00009747-exon-sc0000098-1575043694:420442..422282Clytia hemisphaericaexon
TCONS_00009747-exon-sc0000098-1510915933:432557..432590TCONS_00009747-exon-sc0000098-1510915933:432557..432590Clytia hemisphaericaexon
TCONS_00009747-exon-sc0000098-1510915933:428496..428567TCONS_00009747-exon-sc0000098-1510915933:428496..428567Clytia hemisphaericaexon
TCONS_00009747-exon-sc0000098-1510915933:426480..426671TCONS_00009747-exon-sc0000098-1510915933:426480..426671Clytia hemisphaericaexon
TCONS_00009747-exon-sc0000098-1510915933:425718..425850TCONS_00009747-exon-sc0000098-1510915933:425718..425850Clytia hemisphaericaexon
TCONS_00009747-exon-sc0000098-1510915933:424901..425118TCONS_00009747-exon-sc0000098-1510915933:424901..425118Clytia hemisphaericaexon
TCONS_00009747-exon-sc0000098-1510915933:422688..422756TCONS_00009747-exon-sc0000098-1510915933:422688..422756Clytia hemisphaericaexon
TCONS_00009747-exon-sc0000098-1510915933:420442..422282TCONS_00009747-exon-sc0000098-1510915933:420442..422282Clytia hemisphaericaexon
TCONS_00009747-exon-sc0000098-1491911889:432557..432590TCONS_00009747-exon-sc0000098-1491911889:432557..432590Clytia hemisphaericaexon
TCONS_00009747-exon-sc0000098-1491911889:428496..428567TCONS_00009747-exon-sc0000098-1491911889:428496..428567Clytia hemisphaericaexon
TCONS_00009747-exon-sc0000098-1491911889:426480..426671TCONS_00009747-exon-sc0000098-1491911889:426480..426671Clytia hemisphaericaexon
TCONS_00009747-exon-sc0000098-1491911889:425718..425850TCONS_00009747-exon-sc0000098-1491911889:425718..425850Clytia hemisphaericaexon
TCONS_00009747-exon-sc0000098-1491911889:424901..425118TCONS_00009747-exon-sc0000098-1491911889:424901..425118Clytia hemisphaericaexon
TCONS_00009747-exon-sc0000098-1491911889:422688..422756TCONS_00009747-exon-sc0000098-1491911889:422688..422756Clytia hemisphaericaexon
TCONS_00009747-exon-sc0000098-1491911889:420442..422282TCONS_00009747-exon-sc0000098-1491911889:420442..422282Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000098supercontigsc0000098:420442..432590 -
Expression
No biomaterial libraries express this feature.
Blast
[Close]
BLAST of TCONS_00009747 vs. Swiss-Prot (Human)
Match: ZN112 (Zinc finger protein 112 OS=Homo sapiens GN=ZNF112 PE=1 SV=2)

HSP 1 Score: 209.92 bits (533), Expect = 1.127e-56
Identity = 120/373 (32.17%), Postives = 181/373 (48.53%), Query Frame = 1 
Query:   94 SRLGVPQNQYHDYRRRFICYWCDRRFPHFSALKAHISAHLESARKLCTICNKTFSKKSSLEEHIRTHTGERPYKCNQCGKTFVTSGKLTSHLKIHAGIYAHHCQLCGKKFREHYNLKMHMKMHERRAQEEKEPKKTKMWNCKECEAGFTRKEDLNSHKK-EDHKTPHQLMXXXXXXXXXXXXXXXXVNEDGVSAAKKRTLRTTGFTQKEDGTYVCDLCQKEFVKKDYLNRHLRRHESSTATDCGECGKTYRDKPTMRQHMVDAHGSEAKHYCNICKQGFVILSTLQRHMRIHLDSRPFTCDQCPGTYKSKEDLRRHKRTHEADRPYKCDICHNGFVDKSGLNRHMRIHTGEKPFTCPDCGQSFTQCGTMKLHR 1209
            S L V Q + H   + + C  CD+ F   S L+AH   H       C  C K FS+ S L+ H R HTGE+PYKC +CGK F  S  L  H ++H G     C+ CGK F   +NL++H ++H             K + C+EC  GF++   L +H++    + P+Q                   +E G S +++  L++       +  Y+C++C K F ++ YL  H R H       C  CGK +     +  H    H     + C +C +GF   S LQ H R+H++ RP+ C+QC   +     L+ H R H  ++PYKC++C  GF  +S L  H R+HTGEKP+ C  CG+ F     + +H+
Sbjct:  538 SVLNVHQ-RVHTGEKPYKCEECDKGFSRSSYLQAHQRVHTGEKPYKCEECGKGFSRNSYLQGHQRVHTGEKPYKCEECGKGFSRSSHLQGHQRVHTGEKPFKCEECGKGFSWSFNLQIHQRVH----------TGEKPYKCEECGKGFSKASTLLAHQRVHTGEKPYQ------------------CDECGKSFSQRSYLQSHQSVHSGERPYICEVCGKGFSQRAYLQGHQRVHTRVKPYKCEMCGKGFSQSSRLEAHR-RVHTGGKPYKCEVCTKGFSESSRLQAHQRVHVEGRPYKCEQCGKGFSGYSSLQAHHRVHTGEKPYKCEVCGKGFSQRSNLQAHQRVHTGEKPYKCDACGKGFRWSSGLLIHQ 880

HSP 2 Score: 139.043 bits (349), Expect = 1.611e-33
Identity = 90/318 (28.30%), Postives = 134/318 (42.14%), Query Frame = 1 
Query:  124 HDYRRRFICYWCDRRFPHFSALKAHISAHLESARKLCTICNKTFSKKSSLEEHIRTHTGERPYKCNQCGKTFVTSGKLTSHLKIHAGIYAHHCQLCGKKFREHYNLKMHMKMHERRAQEEKEPKKTKMWNCKECEAGFTRKEDLNSHKKEDHKTPHQLMXXXXXXXXXXXXXXXXVNEDGVSAAKKRTLRTTGFTQKEDGTYVCDLCQKEFVKKDYLNRHLRRHESSTATDCGECGKTYRDKPTMRQHMVDAHGSEAKHYCNICKQGFVILSTLQRHMRIHLDSRPFTCDQCPGTYKSKEDLRRHKRTHEADRPYKCD 1077
            H   + F C  C + F     L+ H   H       C  C K FSK S+L  H R HTGE+PY+C++CGK+F     L SH  +H+G   + C++CGK F +   L+ H ++H R           K + C+ C  GF++   L +H                                       R + T G        Y C++C K F +   L  H R H       C +CGK +    +++ H    H  E  + C +C +GF   S LQ H R+H   +P+ CD C   ++    L  H+R H +D+ YK +
Sbjct:  631 HTGEKPFKCEECGKGFSWSFNLQIHQRVHTGEKPYKCEECGKGFSKASTLLAHQRVHTGEKPYQCDECGKSFSQRSYLQSHQSVHSGERPYICEVCGKGFSQRAYLQGHQRVHTR----------VKPYKCEMCGKGFSQSSRLEAH---------------------------------------RRVHTGG------KPYKCEVCTKGFSESSRLQAHQRVHVEGRPYKCEQCGKGFSGYSSLQAHH-RVHTGEKPYKCEVCGKGFSQRSNLQAHQRVHTGEKPYKCDACGKGFRWSSGLLIHQRVHSSDKFYKSE 892

HSP 3 Score: 136.732 bits (343), Expect = 8.021e-33
Identity = 103/365 (28.22%), Postives = 148/365 (40.55%), Query Frame = 1 
Query:  127 DYRRRFICYWCDRRFPHFSALKAHISAHLESARKLCTICNKTFSKKSSLEEHIRTHTGERPYKCNQCGKTFVTSGKLTSHLKIHAGIYAHHCQLCGKKFREH---YNLKMHMKMHERRAQEEKEPKKTKMWNCKECEAGFTRKEDLNSHKKEDHKTPHQLMXXXXXXXXXXXXXXXXVNEDGVSAAKKRTLRTTGFTQKEDGTYVCDLCQKEFVKKDYLNRHLRRHESSTATDCGECGKTYRDKPTMRQHMVDAHGSEAKHYCNICKQGFVILSTLQRHMRIHLDSRPFTCDQCPGTYKSKEDLRRHKRTHEADRPYKCDICHNGFVDKSGLNRHMRIHTGEKPFTCPDCGQSFTQCGTMKLHRA 1212
            +Y + FIC          S L      H+E        C   FS  S  ++    HT E+PYK   C  +F  +  L  H KIH G          K  +EH   +N    +K H+R    +K       + C  C  GF  +  LN H++                               V   +K               Y C+ C K F +  YL  H R H       C ECGK +     ++ H    H  E  + C  C +GF   S LQ H R+H   +PF C++C   +    +L+ H+R H  ++PYKC+ C  GF   S L  H R+HTGEKP+ C +CG+SF+Q   ++ H++
Sbjct:  419 EYGKSFICS---------SNLDIQHRVHMEENSYNSEECGNGFSLASHFQDLQIVHTKEQPYKRYVCSNSFSHNLYLQGHPKIHIG---------EKPRKEHGNGFNWSSKLKDHQRVHTGQKP------YKCNICGKGFNHRSVLNVHQR-------------------------------VHTGEK--------------PYKCEECDKGFSRSSYLQAHQRVHTGEKPYKCEECGKGFSRNSYLQGHQ-RVHTGEKPYKCEECGKGFSRSSHLQGHQRVHTGEKPFKCEECGKGFSWSFNLQIHQRVHTGEKPYKCEECGKGFSKASTLLAHQRVHTGEKPYQCDECGKSFSQRSYLQSHQS 713
The following BLAST results are available for this feature:
BLAST of TCONS_00009747 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZN1121.127e-5632.17Zinc finger protein 112 OS=Homo sapiens GN=ZNF112 ... [more]
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