TCONS_00009762 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009762
Unique NameTCONS_00009762
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length265

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009762 ID=TCONS_00009762|Name=TCONS_00009762|organism=Clytia hemisphaerica|type=transcript|length=265bp
NNTTGGGGCTGATGTTGGGGATGTACCATGCAATATGAGGTCTAACTTAA
GCGCCTAAGACCGTAAGGATGACGGCCTGTCGAaggactgtaaggaggac
agccaTACGAGCGTGGAATGTAAGGAGGACAGCCTTTACTCCTAACCTTA
TGATCgtggactgtaaggaggacagcctTTACTCCTAACCTTATGAGCgt
ggactgtaaggaggacagcctTTACTCCTAACATGTATGTGCATGTAGAT
ACTGTATAAGCTAGC
Run BLAST on NCBI

transcript from alignment at sc0000098:146255..146519

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009762 ID=TCONS_00009762|Name=TCONS_00009762|organism=Clytia hemisphaerica|type=transcript|length=265bp|location=Sequence derived from alignment at sc0000098:146255..146519 (Clytia hemisphaerica)
GCTAGCTTATACAGTATCTACATGCACATACATGTTAGGAGTAAaggctg
tcctccttacagtccacGCTCATAAGGTTAGGAGTAAaggctgtcctcct
tacagtccacGATCATAAGGTTAGGAGTAAAGGCTGTCCTCCTTACATTC
CACGCTCGTAtggctgtcctccttacagtcctTCGACAGGCCGTCATCCT
TACGGTCTTAGGCGCTTAAGTTAGACCTCATATTGCATGGTACATCCCCA
ACATCAGCCCCAANN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005454XLOC_005454Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009762-exon-sc0000098-1491911889:146255..146519TCONS_00009762-exon-sc0000098-1491911889:146255..146519Clytia hemisphaericaexon
TCONS_00009762-exon-sc0000098-1510915933:146255..146519TCONS_00009762-exon-sc0000098-1510915933:146255..146519Clytia hemisphaericaexon
TCONS_00009762-exon-sc0000098-1575043694:146255..146519TCONS_00009762-exon-sc0000098-1575043694:146255..146519Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000098supercontigsc0000098:146255..146519 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.4089	4.98133	6.43723	4.59634	7.46863	5.98857	11.7967	9.26293	4.42268	23.067	8.24431	3.11508	4.29663	4.45803	2.27608	2.44583	6.14374	5.36974	4.94391	3.22336	8.01391	6.52888	4.50081	5.91199	3.59744	0	6.33609	9.50539	6.46983	2.83328
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00009762 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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