TCONS_00009764 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009764
Unique NameTCONS_00009764
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length277

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009764 ID=TCONS_00009764|Name=TCONS_00009764|organism=Clytia hemisphaerica|type=transcript|length=277bp
CAACTTTGCAActctttgattttcatcaacCTTGATTTGTTTACGTCCCT
ATATTATTCTCTTATGCTTCCATCTAGGTCCgcttacaatttttttattt
tttttctttttttcgaagGGGATTCCCCTGATATCCACATCCGCTCAGTG
ATTTTCCTATAGGGCGTTGTGGCGTCTCTGGGTTTTACGAGGGAGAGACC
ACTCTTTCCATCCGGATAGGCCCCGCTTGTTTAAGATTGGTCCCTCTTTC
CGATACACACTGTCGCACACAACACCC
Run BLAST on NCBI

transcript from alignment at sc0000098:163363..163639

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009764 ID=TCONS_00009764|Name=TCONS_00009764|organism=Clytia hemisphaerica|type=transcript|length=277bp|location=Sequence derived from alignment at sc0000098:163363..163639 (Clytia hemisphaerica)
GGGTGTTGTGTGCGACAGTGTGTATCGGAAAGAGGGACCAATCTTAAACA
AGCGGGGCCTATCCGGATGGAAAGAGTGGTCTCTCCCTCGTAAAACCCAG
AGACGCCACAACGCCCTATAGGAAAATCACTGAGCGGATGTGGATATCAG
GGGAATCCCcttcgaaaaaaagaaaaaaaataaaaaaattgtaagcGGAC
CTAGATGGAAGCATAAGAGAATAATATAGGGACGTAAACAAATCAAGgtt
gatgaaaatcaaagagTTGCAAAGTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005456XLOC_005456Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009764-exon-sc0000098-1491911889:163363..163639TCONS_00009764-exon-sc0000098-1491911889:163363..163639Clytia hemisphaericaexon
TCONS_00009764-exon-sc0000098-1510915933:163363..163639TCONS_00009764-exon-sc0000098-1510915933:163363..163639Clytia hemisphaericaexon
TCONS_00009764-exon-sc0000098-1575043694:163363..163639TCONS_00009764-exon-sc0000098-1575043694:163363..163639Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000098supercontigsc0000098:163363..163639 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.51444	1.00332	1.16495	2.72991	6.24376	3.83748	1.98418	4.33432	0.433509	1.07394	3.64838	2.05569	4.44779	9.47445	0.876348	1.88091	1.93094	0.791661	0	1.71675	2.59773	4.36697	1.17969	0.536257	2.20933	1.97177	1.4108	2.25846	1.41513	1.74524
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00009764 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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