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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00009766 ID=TCONS_00009766|Name=TCONS_00009766|organism=Clytia hemisphaerica|type=transcript|length=1641bp
GAAAATAAATTGTCAGTTAGATAAGCATGTTCGTTGGCTAGCCATTTTCA
GAAATGGAAGATTTCATCTCTCTATCAAATTATCGACCTCACTTTTGCTT
CAAATGTCTTCCAATAGTAAACCAATTGACGCAGAATTTTACATAGATTC
caaaaaagtagcaaaaaagcAAGCTAAAGTTTCTGTATCTAAAGTATGGC
CCTTTGAAGTACTGCCCGTATTTTGACCTCACGactacgagtatactcgt
agtTGGCAGCGAACTTGTTAAAGTGAGAAAAACAGTGTGTAAAATAACAT
AGAAGATAAGTTCTTATAAGTAAAGGATTTTTTGGTCATGTACGAATTTA
TAACTTAAGCCTGTTACGTCACTTTCATTTAAAACCTAGGAAGGTATTTT
TACAATTCAAACGAAAAACCATATGACTGTACTGATTGTCCAATTGTGTC
CGAATTTCTGTCCAGATTTTTTCTAACTGTATTTCGGACAGAGAATTTAG
GCCGTTACTGTGAAATTGGACTTGAATGTAACACTGTTCCCATCAGCTTG
AAATTTATGAACAGAATTCTGTAAACATATAAACCCTACCATGATGAAAA
CTTGGCTATAAGATTCTTCCCCGTGAGAAACATGTCGTGAAATTTCAATT
CCTTCGCAAAGTGGTTTTGAGTTAAAATTTTGGATCTTTAGCTGTAAACA
ACAGAATTTGCGTTTTTTATACAAGAACAAAGAATATAAGAGCGTAAAAG
GCTTCCAGACACAAAAACTTAAAGACATTCTAAGAACTTTTTAAAGCTTT
acttgcagactctaaaacactcgatttcttagaATATTAGActaaaagaa
ctcaaaaatggtgaaattgaAAAGAACATCTGGCTTAGCAAAAGTTGTAA
GTTCATAGCATTGAAACTCTTTTGATTCAAGACTGgataaagaaattttg
acgaaAATCAATGATAAAAGACTGCTGCTGAAATACCGTACTTACCTATA
CAAAAGTtctcttaaccctttaagtgcgaCGGccctttttttctaagttt
ttcaagaaaatcgctagttcaaactttaaaggctttgtATCTCCGGACCT
AGAcagcgcggacctgactgaatgacggaaaggtgcccagtggtaaaact
tcaaatcaattcgctAGAGGACAGTAAAACAGGACCAAATTAGGAGGTTG
ACCACTCGTTGagcaaaaatgatcaaaaaacggtcaaaatctctTGATTA
ACTTTTCGCTTAAAATCTCGCtagaaagactcacttttgaattttttttt
gttgaccATGAAGCACAATCCAATGCACTTAAAGCATCCTCCTTCTTGGT
ATCCCCCccctaacctttaaaaatgcctattccccaaggattttggacaa
aaatagctaactATGGTGAAATAATagaaagcgaaataataaacttcttt
cttctttttgactcatcTACTAGTCTAGACTAAACAGAAGACCAAATTGC
ATAACCTAATAGCGCCAAAATCTATATATTCGGACAGTGCTACTGTACAG
CCACTTCTTCATCTTGGCAAGTTTGATTGTGAAGGGGGCTTTTGGATTGT
TAGTTGAGTAAGGTATTTCTACTTAGTGGAAAACGCTGATT Run BLAST on NCBI transcript from alignment at sc0000098:184787..186427 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00009766 ID=TCONS_00009766|Name=TCONS_00009766|organism=Clytia hemisphaerica|type=transcript|length=1641bp|location=Sequence derived from alignment at sc0000098:184787..186427 (Clytia hemisphaerica)
AATCAGCGTTTTCCACTAAGTAGAAATACCTTACTCAACTAACAATCCAA
AAGCCCCCTTCACAATCAAACTTGCCAAGATGAAGAAGTGGCTGTACAGT
AGCACTGTCCGAATATATAGATTTTGGCGCTATTAGGTTATGCAATTTGG
TCTTCTGTTTAGTCTAGACTAGTAgatgagtcaaaaagaagaaagaagtt
tattatttcgctttctATTATTTCACCATagttagctatttttgtccaaa
atccttggggaataggcatttttaaaggttagggGGGGGATACCAAGAAG
GAGGATGCTTTAAGTGCATTGGATTGTGCTTCATggtcaacaaaaaaaaa
ttcaaaagtgagtctttctaGCGAGATTTTAAGCGAAAAGTTAATCAaga
gattttgaccgttttttgatcatttttgctCAACGAGTGGTCAACCTCCT
AATTTGGTCCTGTTTTACTGTCCTCTagcgaattgatttgaagttttacc
actgggcacctttccgtcattcagtcaggtccgcgctgTCTAGGTCCGGA
GATacaaagcctttaaagtttgaactagcgattttcttgaaaaacttaga
aaaaaagggCCGtcgcacttaaagggttaagagaACTTTTGTATAGGTAA
GTACGGTATTTCAGCAGCAGTCTTTTATCATTGATTttcgtcaaaatttc
tttatcCAGTCTTGAATCAAAAGAGTTTCAATGCTATGAACTTACAACTT
TTGCTAAGCCAGATGTTCTTTtcaatttcaccatttttgagttcttttag
TCTAATATtctaagaaatcgagtgttttagagtctgcaagtAAAGCTTTA
AAAAGTTCTTAGAATGTCTTTAAGTTTTTGTGTCTGGAAGCCTTTTACGC
TCTTATATTCTTTGTTCTTGTATAAAAAACGCAAATTCTGTTGTTTACAG
CTAAAGATCCAAAATTTTAACTCAAAACCACTTTGCGAAGGAATTGAAAT
TTCACGACATGTTTCTCACGGGGAAGAATCTTATAGCCAAGTTTTCATCA
TGGTAGGGTTTATATGTTTACAGAATTCTGTTCATAAATTTCAAGCTGAT
GGGAACAGTGTTACATTCAAGTCCAATTTCACAGTAACGGCCTAAATTCT
CTGTCCGAAATACAGTTAGAAAAAATCTGGACAGAAATTCGGACACAATT
GGACAATCAGTACAGTCATATGGTTTTTCGTTTGAATTGTAAAAATACCT
TCCTAGGTTTTAAATGAAAGTGACGTAACAGGCTTAAGTTATAAATTCGT
ACATGACCAAAAAATCCTTTACTTATAAGAACTTATCTTCTATGTTATTT
TACACACTGTTTTTCTCACTTTAACAAGTTCGCTGCCAactacgagtata
ctcgtagtCGTGAGGTCAAAATACGGGCAGTACTTCAAAGGGCCATACTT
TAGATACAGAAACTTTAGCTTgcttttttgctacttttttgGAATCTATG
TAAAATTCTGCGTCAATTGGTTTACTATTGGAAGACATTTGAAGCAAAAG
TGAGGTCGATAATTTGATAGAGAGATGAAATCTTCCATTTCTGAAAATGG
CTAGCCAACGAACATGCTTATCTAACTGACAATTTATTTTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00009766-exon-sc0000098-1491911889:184787..186427 | TCONS_00009766-exon-sc0000098-1491911889:184787..186427 | Clytia hemisphaerica | exon |
| TCONS_00009766-exon-sc0000098-1510915933:184787..186427 | TCONS_00009766-exon-sc0000098-1510915933:184787..186427 | Clytia hemisphaerica | exon |
| TCONS_00009766-exon-sc0000098-1575043694:184787..186427 | TCONS_00009766-exon-sc0000098-1575043694:184787..186427 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000098 | supercontig | sc0000098:184787..186427 . |
Blast
The following BLAST results are available for this feature:
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