TCONS_00009768 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009768
Unique NameTCONS_00009768
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length287

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009768 ID=TCONS_00009768|Name=TCONS_00009768|organism=Clytia hemisphaerica|type=transcript|length=287bp
ggaaaaggtaccctgaccagcggcacatccccgtaTCCTTTTTACCCAAG
TACCCTCCCCCTAGGGCCTCTACAAAACCGTAAATATCTATAATGAGCAC
GAATCTGTTAGTGGATACCAACAGCCTAATCAGGTGTCTGAAGATAGATA
CCATATTCAAAATATCACGAAAAACATATTTGGTTCATATCTGTTGCAGT
ATAAATTTAACCAATTAAAGTTTGTAACTAAATGATTTTCACTCACTCCT
TTTTATATTTTcgcctgaaaaaaattataagacgAAA
Run BLAST on NCBI

transcript from alignment at sc0000098:187306..187592

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009768 ID=TCONS_00009768|Name=TCONS_00009768|organism=Clytia hemisphaerica|type=transcript|length=287bp|location=Sequence derived from alignment at sc0000098:187306..187592 (Clytia hemisphaerica)
TTTcgtcttataatttttttcaggcgAAAATATAAAAAGGAGTGAGTGAA
AATCATTTAGTTACAAACTTTAATTGGTTAAATTTATACTGCAACAGATA
TGAACCAAATATGTTTTTCGTGATATTTTGAATATGGTATCTATCTTCAG
ACACCTGATTAGGCTGTTGGTATCCACTAACAGATTCGTGCTCATTATAG
ATATTTACGGTTTTGTAGAGGCCCTAGGGGGAGGGTACTTGGGTAAAAAG
GAtacggggatgtgccgctggtcagggtaccttttcc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005459XLOC_005459Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009768-exon-sc0000098-1491911889:187306..187592TCONS_00009768-exon-sc0000098-1491911889:187306..187592Clytia hemisphaericaexon
TCONS_00009768-exon-sc0000098-1510915933:187306..187592TCONS_00009768-exon-sc0000098-1510915933:187306..187592Clytia hemisphaericaexon
TCONS_00009768-exon-sc0000098-1575043694:187306..187592TCONS_00009768-exon-sc0000098-1575043694:187306..187592Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000098supercontigsc0000098:187306..187592 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	1.32338	1.02438	0.501097	3.05019	0.96412	1.16317	1.63342	2.28719	1.41653	0.458305	0.903815	0	0	0	0	0.679176	0	0	0	0	0	0	0	0	0	2.48112	1.98594	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00009768 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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