|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00009817 ID=TCONS_00009817|Name=TCONS_00009817|organism=Clytia hemisphaerica|type=transcript|length=1680bp
GAAACTTTAAAGCGGAAGGGTCGTTATTTTTTTCGTCAAAGTTCAAATCA
AACATTTTTGTCTCTGTTTTTCCAATTCAtctataattttttcaaaattt
tcgatttcttcaATTTCAAGCTATCATCATGCGTGAATGTATCTCCATCC
ATCTTGGCCAAGCTGGTGTCCAAATGGGAAATGCTTGTTGGGAATTGTAC
TGTTTGGAGCATGGAATCCAACCTGATGGTCAAATGCCTTCAGACAAAAC
TATTGGAGGCGGTGACGATTCATTTAACACCTTTTTCAGTGAAACCAGTT
CTGGCAAACACGTCCCAAGAGCTCTTTTTATTGATCTGGAACCCACCGTA
GTTGATGAAGTCCGCAGTGGAACATACCGACGTCTTTTTCATCCGGACCA
ACTCATCAGCGCNATCGATGTCTTGGTTGACCGAATCAGAAAAACAGCTG
ATAAATGTACTGGTCTTCAAGGTTTCTTAGTCTTTCACTCTTTCGGTGGC
GGAACTGGATCCGGATTCACTTCCTTGTTGATGGAACGTCTTTCTGTCGA
GTacggcaaaaaaacaaaactcgaATTCGCCATTTACCCTGCTCCACAAG
TTTCCACAGCAGTTGTCGAGCCTTATAATGCCATCTTAACGACACACACA
ACCTTGGAGCACACCGATTGTGCTTTCATGGTTGACAATGAGGCCATCTA
CGATATCTGTCGTGCTAATTTGTCTATTGACCGTCCGACGTACACCAATT
TAAACCGTTTGATTGGCCAAATCGTCTCCTCCATTACTGCTTCTCTCCGA
TTCGATGGTGCTTTGAATGTCGATTTAACTGAGTTCCAAACTAACTTGGT
CCCATATCCACGTATTCATTTCCCCTTGGCAACTTATGCTCCAGTCATCT
CTGCTGAGAAAGCTTACCATGAACAACTCAGCGTTGTcgaaatcaccaac
tcctgttTCGAACCATCCAACCAAATGGTTAAATGTGATCCACGTCATGG
TAAATATATGGCATGCTGTATGTTGTACCGTGGTGATGTTGTTCCCAAGG
ATGTCAATTCTGCCATTGCTACCATCAAAACAAAACGAAGTATCCAATTC
GTCGATTGGTGTCCAACTGGATTCAAGGTTGGAATCAACTACCAACCACC
TACTGTTGTACCAGGAGGTGATCTTGCTAAAGTCCAAAGAGCTGTCTGCA
TGTTGTCCAATACAACTGCTATTGCTGAAGCCTGGGCTCGACTTGATCAT
AAATTCGATTTGATGTACGCTAAACGTGCTTTTGTGCATTGGTATGTTGG
AGAAGGTATGGAAGAAGGAGAATTTTCAGAGGCTCGTGAAGATTTGGCTG
CTTTGGAGAAAGATTACGAAGAAGTTGGTTTGGATTCTGTAGACTCCGAT
GAAGAAGATGaggatgaatattaaatttCGGACAAACTCAGCAAATTTCG
GACATCCTGAACAAATTTCGATTACCTTGAACAAATTTCGGACAAATCAT
CGGACgaattttgtttatatattaAATCTACTTGTTATCCAAGAATCtat
aaaattattaaatttattttacacCAACTTCAGTAAATTAAGTTTATTCA
AATTGCactgcttaaaaaagtcttcattataattttaattgtaaattcaa
caaaataatttatctaTGCACGTATAAAAA Run BLAST on NCBI transcript from alignment at sc0000099:429602..439265+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00009817 ID=TCONS_00009817|Name=TCONS_00009817|organism=Clytia hemisphaerica|type=transcript|length=9664bp|location=Sequence derived from alignment at sc0000099:429602..439265+ (Clytia hemisphaerica)
GAAACTTTAAAGCGGAAGGGTCGTTATTTTTTTCGTCAAAGTTCAAATCA
AACATTTTTGTCTCTGTTTTTCCAATTCAtctataattttttcaaaattt
tcgatttcttcaATTTCAAGCTATCATCATGGTAAGTCATTTACAATatc
aatttttataagaacatccaatattTTTAAACCCTTTAGATGTTCataga
attttgaatttaagaCTAAAAAATGATCTGAAgcattcttatttttacca
ttttgtgagtatttttgtgcaatttccctAAGAAATTTGGAGTTGAATAA
GAAGTTTAGAGTGTCTGCAAAGCCTtggaatgtttttaacttgatcttaa
cattttggtcgtcaaaaagccttatattcttatataagtttgttcttata
aaaagaacatgTGACTAAATGGGCCTTTTCAGgtgaattttattgtttat
ggTGTTTAAGGTATTACTGGTTTAATTTTAACACACAAAAACAtcttttt
attatattattactCTTAATATTTTAGCGTGAATGTATCTCCATCCATCT
CGGCCAAGCTGGCGTCCAAATGGGAAATGCTTGTTGGGAATTGTATTGTT
TAGAGCATGGAATCCAACCTGATGGTCAAATGCCTTCAGACAAAACTATT
GGAGGCGGTGACGATTCATTCAACACCTTTTTTAGTGAAACCAGTTCTGG
CAAACACGTCCCAAGAGCTCTTTTTATTGATCTGGAACCCACAGTAGTTG
GTAAGTCCTTTTATATaataaattcacaaaaaattgcAATATGATTTACA
ACGTTGAAAAATAATGTAAAGACTTCGTAAAGATTTTGGGAAATTAATTG
AGAAAatatccggggggggggtacttaggcaaatggagggtatggtatgt
gccgcccttaaggggtaccttttttggatttccaaagtcccgctaagggt
caaaaaattagaaaatcaatttcagtcccactacgGGTAGAAGaagtagg
aaaatttcaactttttaccccagaaagatcgaaatttggtcaaaatttgt
caaatttgtcccggtaagggtcgtaaaattcacaaaattttcctttgttt
tcttctttttagtcctggtaagggtccgagggtcggaAGTTGGgtggtac
ccccccccctgtcagctcgcaaccctagtacctccacccaggttttatga
ctttattgtcaACATTAgtcataaaacccagctaaaatcacaaaatctta
aaatacttAGATCTTTATGAGTAATACTATCATTTCTCTGGTACATAGCA
AATGGATGTATACACGTTTTNcccccccccccccgggggaaaTATCCTTC
CgaaacattgaatttttttttgttttgctttatcAGTTGTTATTTGTTGC
TATCGAACCAGATCAATAGGTATTTGAATAAAAGAATTCTGAATAAGCAA
TCTTGaattgatattttcagaatGTATCGAATAAAGTGTAAAAAACTATT
CATTATTGAGGAGAGATTTCTGTCTTGAATGTTAAGGATGTTGAAAGCTA
TTTCTGTGTtgaattttaaaggttttatttttacataagtgttccctttc
atatcagacacatttcATATTAgggcagtgtctgcctattgttatattat
gctgatatcaacaaaaaaaatgtttttcttttcctatttttgaccaatct
tgctccacatcagtgtcaattcaatttgaaaaagcttgtgaattaaaatt
aatgagtaagcaaacgatatcattcttatttaaaaacaaaacctttcttt
caaatgatttcttttttgaatgttGAGGATGTGGTAGCTGAATGTTAACG
ATGTGGAAGGTTGACTTTCGTCTTGAGTTGAATGCTAGGGACGTGGGAAG
TGTTTTCAATGTTGAATGTTACGGATGTGGAAGATGATTTCCTTTTTGAA
TGTTAAGGATGTGGAGAAGTGATCCCCGTCCTAAATGTTAAGGATGCAGA
AAGTGTTTTCCAGCCTAAATGTTACGCTTAAGGATGTGGAAGTTGATTTA
GGCCTTGAATTTTGGGGATGTAGAacaagattttcattttcaaaaaaaaa
aacattttgaaaatctttattttttcagatgaaGTCCGAAGTGGTACATA
CAGACGTCTTTTTCATCCGGAACAGCTCATCAGTGGAAAAGAAGACGCAG
CTAATAACTACGCCAGAGGACATTACACCGTTGGTAAAGAACTCATCGAT
GTCTTGGTTGACCGAATCAGAAAAACAGCTGATAAATGTACTGGTCTTCA
AGGTTTCTTAGTCTTTCACTCTTTCGGTGGCGGAACTGGATCCGGATTCA
CTTCCTTGTTGATGGAACGTCTTTCTGTCGAGTacggcaaaaaaacaaaa
ctcgaATTCGCCATTTACCCTGCTCCACAAGTCTCTACAGCAGTTGTCGA
GCCTTATAATGCCATCTTAACGACACACACAACCTTGGAACACACCGATT
GTGCTTTCATGGTTGACAATGAGGCCATCTACGATATCTGTCGTGCTAAT
TTGTCTATTGACCGTCCGACGTACACCAATTTAAACCGTTTGATTGGCCA
AATCGTCTCCTCCATTACTGCTTCTCTCCGATTCGATGGTGCTTTGAATG
TCGATTTAACTGAGTTCCAAACTAATTTGGTCCCATACCCACGTATTCAT
TTCCCCTTGGCAACTTATGCTCCAGTCATTTCTGCTGAGAGGGCTTACCA
TGAACAACTAAGCGTTGATGAAATCACCACTGCCTGTTTCGAACCAGCTA
ACCAAATGGTCAAATGTGATCCTCGTCATGGTAAATATATGTCATGTTGC
TTGTTATATCGTGGAGATGTTGTCCCCAAGGATGTCAATTCTGCTATCGC
CAAGATCAAAACAAAGCGAACCATCCAATTTGTCGATTGGTGTCCAACTG
GATTCAAGATTGGAATCAACTACCAACCACCAACTGTAGTACCAGGAGGT
GATCTTGCTAAAGTCCAAAGAGCTGTTTGCATGTTGTCCAACACAACTGC
TATTGCTGAAGCTTGGGCTCGACTTGATCATAAATTCGATTTGATGTACG
CTAAACGTGCTTTTGTACATTGGTATGTTGGAGAAGGTTAGTTTAAGACT
TTTTTCTTCTGTTTGCGAAGATTTTCAATGCTTTACTTCGATTTCACTTT
CTAGTTTCTGATGCATGCTGGAATGCTATATTTATAGAGACCACAGCATC
ACTCTGATAAAAGAGTATGGGGGAGTATGTCAGGTATTACATGTGTTGTG
GTGACGATACTCATAGGTTCAACACCTGCGAATACAAATTTTCTCCTGTG
TAGTTCGAGTATCTTTGTCCATACACCAATAACTCAGGGTTAGCAGTGTC
TGGCAAGCGTGTTAATTCCCCTATCCTATTTATCCAGGGATAGGGCCCAT
TCTCTCTTCTCTCACAGCATCACATTTTCAGATGCTACTTTTAAGGAAAG
CAATATTTAGTGCTTAataataactttaaaaaaatattttacaggaTACT
AACAAATATTCAAGGTGCTTATTAAGTTGTTAGATAATACACTGATCTTA
ATTTTTAACGTTTGATTTTCCTGTTCTGTTTTAAGGTATGGAAGAAGGAG
AATTTTCAGAGGCTCGTGAAGATTTGGCTGCTTTGGAGAAAGATTACGAA
GAAGTCGGTTTGGATTCTCAAGATTCCGATGAAGAAGAAGACGATGGTGA
TGAATATTAAATTTCGGACAAAGTCAGCAAATTTCGGACACAATGAATAA
ATTTCGGACAAACTCTTGGACGGATTTTGTTTATATTCAAACAcacaatt
tattatttattatctgAAAATTGAAATGAGTTAATGCTAGATGCACCGCA
ATGTAAATAAGAAATATTCGAAATAATGCACTGGAACAAAGTTCACATta
attttgcttgtaaaatttttaaatgttcAAATAAGTTAAATATCTACGCA
CGTTTTTCGTATCTACTTACAAgtgggaaattattatcaattcttaggca
aattaaggcctgtccagatttttcaaacttacctCAATTTTTTGTCACCG
TTTCCACTTATCATAGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNt
gctgacgtcagcaaaacttgttttttgaataactccagtttggcttatgg
taaaaacatgaaatttggaccaaagttgcacaccattaaaaggatcattt
taaaaaagaaaatttttgaaattttgctgacgtcagcaggtaattgcaaa
attttgtattttgctggtttctgctgacgtcagcaaaatttgcaaaaaaa
aattatgcaaaaatgttcctattattgatatgcaatttttgtccaaattt
catgaatataccataagccaaacttgagttattcaaaaaacaagttttgc
taacgtcagcattttttgtttttttctaatatctttttttgtgcgaaaaa
attaattatggcacagctattccagtgatctacactccaataggcttctt
tcgatgtatgaagtgatatgctatgacaagtggaaacggtgataaaaaat
tatggtaaatTTGGACGTGGCTTAATTTGCCGGAGTTGGGTGGCACGTAT
TCTCCACTCAAATGCTGAATATGTTTTAAAAGTGTTACTATGGATGACCT
TCACTTGTATGAGGCTACAATCatggtaaaatttgagaaaaaataaaagg
gaaattcccacaaaATCTTATAGCCCTAATCGATTTAGaagtgctctaaa
ttaggttggaagggtagagttttaacgctagacttaagacttaaggaTCT
GAGGATCTGATCGGATCtgagttcaaaaatggtccaataaggctcataat
atagcctggaagtctataaacccgagccaaattaAAATGtccgattaaat
taaagagatggcccaaaaccgaactccaaatttcgaaaaacaaggaaata
agCTTActtctcaatagattttgaccatgaaaGTAGGTGGATCCCATTTA
GTGATAGAAGAGCCCCCTCCCAAGCGGTATGCGTGATGACACGATAAGGA
CTTTTTTCTACCGTGATTAcatgatttggaatttttttgtgattgtGTGA
TCAGAGGACAATACGTGATcgtgttttgaaagatttttgctgatttgcgt
gatcgtgatcgaagacaaaaaattgcgtgatatgcGGTGATATATGAGGA
AAAACTTAACTTTTACCCTTTTTCATATAAGAATAGTTTTATAGATTGAG
GGTGGCAAAATTCCAAAGAATATAAAGCCCTGTGTTAGAGACCCGATGGT
ACCTCTTacctactggaaaatttggctaaaatttcgtcCCTGGGAAAAAT
ACCCCCTGCAATTTctgcttaactggaaaattgttttcatccctattttg
aaatttaatgaaattaacttaaactcgttttttttactcaaactatagta
tttgaaattcaatggaaaaattaGCACTCAAAAACCATCTACACTGCGGA
TTATTGTACAGACTTTGTATTGTACAGAAACAATAGGATTTTTATCCCAT
CTCTCCCATGGGGGAGAGATGTTTCACCGgggctttgagacaggggtgca
aaTACGAACAATTTAAGAAATGCTTAGACTAGAATAGTTGAATTTTAAGT
AAACCAAGGGACGAATCAGCAAAAGTAGTGTATTAAAATACTTCAGTATT
AcctagaaaaaagttttaagcTTAGAGTCCCAAAAGGCAAGCCTTATTAA
AATTCACTAGTTCTTACATAAAAGGGTGTATTGGGGACAAGAATTTGTAG
AAACCAAAGTGATTGTTACGCTGAATTTAGATATTGTCCAGGCGTCTCTA
TTTTGAACTTAAGATAGGAATATGGTATTCAACATGTAATTCACTCAATA
AACAGAGTATTCAATGTCACCCTCATAAAAGATTAATAAGCTAATACAGG
TTTCTGTCAAAGTCATGAAAAATTACTACTTCTATtcataccccctggaa
attacAAAGTCTATTCGATTTTCAATGATAATCTAGTTACGTTCAGGGGG
TCGAGAAATCTACAAATGAACACAAAATGAAAACGTCTCAGTTAAGATCG
ATTTGAAACTTTCAAGCGAAAGGTCGTTATTTATTTTGCCGAAGTTCAAA
TCATTTTATccgttattttttcttattctcaATTTTTCCGTTAATTTAAA
GTTTTCAGAATGGTAAGtttgtttattgtttttatatttttaccatATTT
CTAAATCACAATAACAAATATCATCCTTAAAGGTCAAATGAATTTCAATG
TGGGTACCCCTCAAATTTCTTTGCTCCCATTTGCGccatttgattttcaa
aatccaCCTTTACGGTTCTTCCGCCAGGCCTGATGAATCTTAACCTTTTA
CGGAGCAAAACTCCAGCGTGACAGAAAAGAGCTTGAAATTGTATCTTTAG
TAGGTGGCAACTGCAACCTTTTCAAAATATAGGTCTTAAAGTTACTCAAA
CTATAGCGTATCTGAGACCGAAAAACAGCTTGTTATTCCTTTAGAATAAT
GGAATGGAATGTTTCTATTTATATTACACTTAATATTTTAGCGTGAATGT
ATCTCCATCCATCTTGGCCAAGCTGGTGTCCAAATGGGAAATGCTTGTTG
GGAATTGTACTGTTTGGAGCATGGAATCCAACCTGATGGTCAAATGCCTT
CAGACAAAACTATTGGAGGCGGTGACGATTCATTTAACACCTTTTTCAGT
GAAACCAGTTCTGGCAAACACGTCCCAAGAGCTCTTTTTATTGATCTGGA
ACCCACCGTAGTTGGTAAGCAGTTTGTCTTGATTTGTTTTTAGAGTGGGT
TAATGTGAACATACACTCAACATATCTTAGCAGATACAAAAGAGGCTACA
TGTAGCTTTTAATAAAATTCGAATTAAAAGTGGTTTGTGCTGGATAAAAA
GATAATCAGGATTGGAATATtatgaaatagaaaaaattcaaaaaagtttg
gaaagtgaagatgaaaaatgaagaaggaaataataaattttttgtaaaag
tgcACTACGTTTGTTTACCTTTTCTGTTGCTACGTGTTACTATGATGAAG
CCATCTTGAAAATAAGATCAATGGATATATTGAAATTGATTTATCCTGAA
TAAGCATTCTTGAatcgaatttttaaatttctttttcataaaatgttttt
ttcattgaaaaaaaatgtggCTCAGACTCTTTTTTCCTAAACCTCTGGTG
GAGTACACATCCCTTCACAAAGTAATTTCAAAGTGAATCAATAATAaagc
ttttattgaaaaaatgttttatcttTACCAAATCTGTGACATTTACCCAA
TAAATCACCATACATATAGATGGGAAATATTGGATTCATCAAACATGTTT
CTGCATGTTATGTTTGAAGTAAATTATCCAGTCTTgcaattttaagatat
taagaAGATATTCAAGCTGAAAATATAATcctaaattcaaatttcttcTT
CTAGATGAAGTCCGCAGTGGAACATACCGACGTCTTTTTCATCCGGACCA
ACTCATCAGCGCNATCGATGTCTTGGTTGACCGAATCAGAAAAACAGCTG
ATAAATGTACTGGTCTTCAAGGTTTCTTAGTCTTTCACTCTTTCGGTGGC
GGAACTGGATCCGGATTCACTTCCTTGTTGATGGAACGTCTTTCTGTCGA
GTacggcaaaaaaacaaaactcgaATTCGCCATTTACCCTGCTCCACAAG
TTTCCACAGCAGTTGTCGAGCCTTATAATGCCATCTTAACGACACACACA
ACCTTGGAGCACACCGATTGTGCTTTCATGGTTGACAATGAGGCCATCTA
CGATATCTGTCGTGCTAATTTGTCTATTGACCGTCCGACGTACACCAATT
TAAACCGTTTGATTGGCCAAATCGTCTCCTCCATTACTGCTTCTCTCCGA
TTCGATGGTGCTTTGAATGTCGATTTAACTGAGTTCCAAACTAACTTGGT
CCCATATCCACGTATTCATTTCCCCTTGGCAACTTATGCTCCAGTCATCT
CTGCTGAGAAAGCTTACCATGAACAACTCAGCGTTGTcgaaatcaccaac
tcctgttTCGAACCATCCAACCAAATGGTTAAATGTGATCCACGTCATGG
TAAATATATGGCATGCTGTATGTTGTACCGTGGTGATGTTGTTCCCAAGG
ATGTCAATTCTGCCATTGCTACCATCAAAACAAAACGAAGTATCCAATTC
GTCGATTGGTGTCCAACTGGATTCAAGGTTGGAATCAACTACCAACCACC
TACTGTTGTACCAGGAGGTGATCTTGCTAAAGTCCAAAGAGCTGTCTGCA
TGTTGTCCAATACAACTGCTATTGCTGAAGCCTGGGCTCGACTTGATCAT
AAATTCGATTTGATGTACGCTAAACGTGCTTTTGTGCATTGGTATGTTGG
AGAAGGTTAGACTTTTTCTCTCAAATCAACAAAATGCTTAGCTTTCGTAA
GGATCTATAACTTTAGTCATCATTGGTAGCTTGAAGTAAATACAGTCGCT
CccatgttgtcttctgaccagccaccagaaacGTTGGAAAACCAATGGAT
CCGGCGACACTAGAATTCACAACCATGCCATTTAATTTAGATCCTACCTC
CATGATTCTAGGAGATTTGCCCCAAGAAGTTTGCCCCCGTCATTATCTCA
GACTGCACGAATTAAGATCTTGAATCTTCAATCTTATTGttacactgggc
gaaataagtgATTTCCAACCCTGGAAATATcttggaaatatgatatttcc
atatacattagtggaaatatgacttttctatactTCCAAAGTTTAGGAAA
TaacatatttcatgatatttcaaTGAGTTTAATGTATATGGAAATATTAC
actttcaagatatttccaggattggaaatctcttattttgcCCAGTGTTA
TTGCAATTATTCTTGTCATTAATTCTTCTGTGGTCTTTTAATCAAAGGAT
TctgtttaaaatatatttttcgatattttctgTTTTAAGGTATGGAAGAA
GGAGAATTTTCAGAGGCTCGTGAAGATTTGGCTGCTTTGGAGAAAGATTA
CGAAGAAGTTGGTTTGGATTCTGTAGACTCCGATGAAGAAGATGaggatg
aatattaaatttCGGACAAACTCAGCAAATTTCGGACATCCTGAACAAAT
TTCGATTACCTTGAACAAATTTCGGACAAATCATCGGACgaattttgttt
atatattaAATCTACTTGTTATCCAAGAATCtataaaattattaaattta
ttttacacCAACTTCAGTAAATTAAGTTTATTCAAATTGCactgcttaaa
aaagtcttcattataattttaattgtaaattcaacaaaataatttatcta
TGCACGTATAAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00009817-exon-sc0000099-1491911889:429602..429732 | TCONS_00009817-exon-sc0000099-1491911889:429602..429732 | Clytia hemisphaerica | exon |
| TCONS_00009817-exon-sc0000099-1510915933:429602..429732 | TCONS_00009817-exon-sc0000099-1510915933:429602..429732 | Clytia hemisphaerica | exon |
| TCONS_00009817-exon-sc0000099-1575043694:429602..429732 | TCONS_00009817-exon-sc0000099-1575043694:429602..429732 | Clytia hemisphaerica | exon |
| TCONS_00009817-exon-sc0000099-1491911889:436443..436665 | TCONS_00009817-exon-sc0000099-1491911889:436443..436665 | Clytia hemisphaerica | exon |
| TCONS_00009817-exon-sc0000099-1510915933:436443..436665 | TCONS_00009817-exon-sc0000099-1510915933:436443..436665 | Clytia hemisphaerica | exon |
| TCONS_00009817-exon-sc0000099-1575043694:436443..436665 | TCONS_00009817-exon-sc0000099-1575043694:436443..436665 | Clytia hemisphaerica | exon |
| TCONS_00009817-exon-sc0000099-1491911889:437356..438306 | TCONS_00009817-exon-sc0000099-1491911889:437356..438306 | Clytia hemisphaerica | exon |
| TCONS_00009817-exon-sc0000099-1510915933:437356..438306 | TCONS_00009817-exon-sc0000099-1510915933:437356..438306 | Clytia hemisphaerica | exon |
| TCONS_00009817-exon-sc0000099-1575043694:437356..438306 | TCONS_00009817-exon-sc0000099-1575043694:437356..438306 | Clytia hemisphaerica | exon |
| TCONS_00009817-exon-sc0000099-1491911889:438891..439265 | TCONS_00009817-exon-sc0000099-1491911889:438891..439265 | Clytia hemisphaerica | exon |
| TCONS_00009817-exon-sc0000099-1510915933:438891..439265 | TCONS_00009817-exon-sc0000099-1510915933:438891..439265 | Clytia hemisphaerica | exon |
| TCONS_00009817-exon-sc0000099-1575043694:438891..439265 | TCONS_00009817-exon-sc0000099-1575043694:438891..439265 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000099 | supercontig | sc0000099:429602..439265 + |
Blast
BLAST of TCONS_00009817 vs. Swiss-Prot (Human)
Match: TBA3C (Tubulin alpha-3C/D chain OS=Homo sapiens GN=TUBA3C PE=1 SV=3) HSP 1 Score: 789.26 bits (2037), Expect = 0.000e+0 Identity = 382/432 (88.43%), Postives = 405/432 (93.75%), Query Frame = 3
Query: 129 MRECISIHLGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETSSGKHVPRALFIDLEPTVVDEVRSGTYRRLFHPDQLISA-------------------IDVLVDRIRKTADKCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVEYGKKTKLEFAIYPAPQVSTAVVEPYNAILTTHTTLEHTDCAFMVDNEAIYDICRANLSIDRPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVVEITNSCFEPSNQMVKCDPRHGKYMACCMLYRGDVVPKDVNSAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 1367
MRECISIH+GQAGVQ+GNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSET +GKHVPRA+F+DLEPTVVDEVR+GTYR+LFHP+QLI+ +D+++DRIRK AD CTGLQGFL+FHSFGGGTGSGF SLLMERLSV+YGKK+KLEFAIYPAPQVSTAVVEPYN+ILTTHTTLEH+DCAFMVDNEAIYDICR NL I+RPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSV EITN+CFEP+NQMVKCDPRHGKYMACCMLYRGDVVPKDVN+AIATIKTKR+IQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 432
The following BLAST results are available for this feature:
|
