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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00010021 ID=TCONS_00010021|Name=TCONS_00010021|organism=Clytia hemisphaerica|type=transcript|length=662bp
CTTTTGGCAGGTGGCTAAAGAGGAAGACCTGTTTCCTTTCTCTTATCCTC
GCTATGTCTGTCAtataaaaattcagtttttcaaaatgtctcacCGACAA
GAACAAGAAGACGCGTCTTTATATGTGAGGCTAGAAAAGCTCAGCTTGTA
TAAGGGAACAACCAGTATCTGACTGACCATGAGACTTCACATTATCGCTA
GCCTGGTGGTGCTTCTTTTGGCTGTTGTAGCAGTTATTGAAGGGATTCCA
TTCAGAGCAGCGTACCGAACACAGGCTAAACAAGGTGAACGGAAATTACC
AAGTGTCTACATGCAGTTTTTGCGCAGACTCTTAGcaagaaaatatagaa
aaatcgCCGCACATAAAAGAACACTCGCTACTGATGACGCCATTATGAAT
GGAATAAACAATGAAGACTATTTACCATCCTTCGTACGGAGGGAGATGGA
AATTATTCGCTCgtttgaaaaatgagaaaaactttttttgagaaatgaaa
aaaaaaacatagcaTTTTTGACAATCTCTAGGTTCTTTATTTAgtctttt
tttcaagaaatatattttatacCGACACGATACACCAAACAAATTCATAC
CAACATTTTGGTTAAATCAAAGTGAGCtttgcaaggttgtgggttcaacc
cccagccgggcc Run BLAST on NCBI transcript from alignment at sc0000101:271054..273825- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00010021 ID=TCONS_00010021|Name=TCONS_00010021|organism=Clytia hemisphaerica|type=transcript|length=2772bp|location=Sequence derived from alignment at sc0000101:271054..273825- (Clytia hemisphaerica)
CTTTTGGCAGGTGGCTAAAGAGGAAGACCTGTTTCCTTTCTCTTATCCTC
GCTATGTCTGTCATATAAAAATTCAGTTTTTCAAAATGTCTCACCGACAA
GAACAAGAAGACGCGTCTTTATATGTGAGGCTAGAAAAGCTCAGCTTGTA
TAAGGTCAGTTCTTTTTTAGCCCTATTCACGCTTTTAGGGGCGGTTCAAA
ACTAGGGGGTCTGATTCTGTACAACCCTTTAATTTTTTATTTAGTGGGTC
TTTTTGGATGAAATTTGTACAAGGTAAGTTCTTTTTTAAGTCCTTCATCA
GTACTGTGGGAAACTGGAATTCAAAGTTCGTTGGAAAGGTCTTTTCAAGA
TCTATCTTTTTAGATAGTGACTTTTTTTGAATTAAGTCCTCAATCAAAAT
CCATACCAAAAACCGAAATTTACAAGTTACCTCAAGAGAAGCAATTTTGG
TGAATGAGCCCATTCGCCACTTTTGGTGAAATTTTGCAGAATTCATTTTG
GTGATTTAATAAATTTATAGATTTATTGAAAACTAATTTTGGCAAACGAC
CGATTTGTTGTTGAATATTTAAGCTTAAAAAAAGATTTTTAGGAGAAATA
GAGACTAGTGTGAAAGAAATTTAAATTTGGCGAGAATTAATTTTGGCCAA
TGGCCTATAAATCTAAATTCGCCGAAATTTCTTTCCGCCAAATTTCTTCT
CTTGAAGTAAATTCATGGAGATCCGTATCTGTAGTAAACCAGCTTCATCT
ATCTGATACATCGAACGTCCCTGTCACATTGACCCGGTGAAAATATGTTT
GTCAACAGATAAAAAAAGAGGGTGCTAATTTCAAGGGTACTGCTTTCAAT
GTTTAAGTACTTTGTATTGTGTTTTAGCTTAAAATTTCAGTAAAAACTAG
CCGTCACCCGGCGTCGCATCCGCCGAGGATTGGATAAGCTGAGTGCATTA
TAAGCCCTTTGGATGGTGGGGAAGATAAAAAGTCTGATTTGTAAAAAGAT
TTGCCCAAAAAACGGAAAATTACCACTTGCTAGAGTTTCGAATGTGTTTC
TTAGAGGTGATGATGTTTTAGAGTATTGATCTGACCTGACACAATTTTCG
AGCAACTTTTTCAAAGGAATCACAATGAAGCTTAGATAGAAATATTAGAC
AAAGAACTAGAACAAGCGAAATTTCATTTTTCTTTAAAGTATCTGGATGG
ATATTTAGACAGGGGTATAAAATCGACGATTAAAAAAAAAAGACATCCTA
CAGCTTTAAGATACCTTACGTAATATTTCATCAGCTTTCAAAGCTATGGC
CAAACTAGTATAAATATTGTCAGAAGAACCTTCTCGGCTACAGCTTAGCT
AGACAATATTATAGTCTACGACAAATCACTATCTAAAGTCTATTCACGAT
AAGTGTGCACTCTTTTTTCTTTTACCTATAACTTTTGAAGGAATTCTTCA
ATCTTTATAAATTTAGTATCATTGGAAAGATATTAGTGAGTGAAACAATT
TGAAATAAAAAAATCTTTAAAAAATTCTAAAAATGAAGATGAAAATGAAG
AAGAAAAAAAGAAAAGTGCTATAACTTTCATTTTCACTGGAGAGATTCCT
TGATCTAAGGAGATCATCACTGTGAAGAAATTTTATCAAAATATTTATTC
AATATAAAGTTATGATACAAAGTTAATAAGTGATTGACCCCAAAAAACAG
CAAAAAACTGCAGAAAACAGCGTTTTTAGACGGCAATCAGCTTATAACTT
TGTTTGATATCTTTTGACTGAATGATTATTTTTGAGAATTTTTTTCACAG
TGATAACGTTCGATGATCAAGGATTCACTTCAATGAAAATGATAGTTATA
GCACTTTTCTACAAGATCTTAATTTTTTTCTTCTTCATTTTCATCTTCAT
TTTTAGAATTTTTTTAAAGATTATTTTATTTCAAATTGTTCCACTCACTA
ATATCTTTTCAATGATACAAAATTTATAAAGATTGAAGAATTCCTTCAAA
AGTTATAGGTAAAAGAAAAAAGAGTACATACTTATCGTGAATAGACTTTA
AGAAATAAGCCCAAAGCCGAAGAAAATTCGCAAACGGATTTTTTGCCGAA
AAGAGTTTACAGTCGGTAAAGTCATTTTCTCCAGTATGCCGCCATAACGC
CATACCGCCATATTTTCCCACCTTTACTATCACTGTAACGGACGATAACA
TCGTCTACAGCTTAGCTTACAACTAAGTGTAAAAAAAATCATAATTTTAA
AATTCTATTTTCAGGGAACAACCAGTATCTGACTGACCATGAGACTTCAC
ATTATCGCTAGCCTGGTGGTGCTTCTTTTGGCTGTTGTAGCAGTTATTGA
AGGGATTCCATTCAGAGCAGCGTACCGAACACAGGCTAAACAAGGTGAAC
GGAAATTACCAAGTGTCTACATGCAGTTTTTGCGCAGACTCTTAGCAAGA
AAATATAGAAAAATCGCCGCACATAAAAGAACACTCGCTACTGATGACGC
CATTATGAATGGAATAAACAATGAAGACTATTTACCATCCTTCGTACGGA
GGGAGATGGAAATTATTCGCTCGTTTGAAAAATGAGAAAAACTTTTTTTG
AGAAATGAAAAAAAAAACATAGCATTTTTGACAATCTCTAGGTTCTTTAT
TTAGTCTTTTTTTCAAGAAATATATTTTATACCGACACGATACACCAAAC
AAATTCATACCAACATTTTGGTTAAATCAAAGTGAGCTTTGCAAGGTTGT
GGGTTCAACCCCCAGCCGGGCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00010021-exon-sc0000101-1575043694:273672..273825 | TCONS_00010021-exon-sc0000101-1575043694:273672..273825 | Clytia hemisphaerica | exon |
| TCONS_00010021-exon-sc0000101-1575043694:271054..271561 | TCONS_00010021-exon-sc0000101-1575043694:271054..271561 | Clytia hemisphaerica | exon |
| TCONS_00010021-exon-sc0000101-1510915933:273672..273825 | TCONS_00010021-exon-sc0000101-1510915933:273672..273825 | Clytia hemisphaerica | exon |
| TCONS_00010021-exon-sc0000101-1510915933:271054..271561 | TCONS_00010021-exon-sc0000101-1510915933:271054..271561 | Clytia hemisphaerica | exon |
| TCONS_00010021-exon-sc0000101-1491911889:273672..273825 | TCONS_00010021-exon-sc0000101-1491911889:273672..273825 | Clytia hemisphaerica | exon |
| TCONS_00010021-exon-sc0000101-1491911889:271054..271561 | TCONS_00010021-exon-sc0000101-1491911889:271054..271561 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000101 | supercontig | sc0000101:271054..273825 - |
Blast
The following BLAST results are available for this feature:
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