TCONS_00010023 (transcript) - C. hemisphaerica

Overview
NameTCONS_00010023
Unique NameTCONS_00010023
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1992

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00010023 ID=TCONS_00010023|Name=TCONS_00010023|organism=Clytia hemisphaerica|type=transcript|length=1992bp
TGGGtttacaatagaccttttttcaaagaggacgtcctgttgaataatta
tgtagtccagccataaaaacaatgatagagccatgcattgttttattatt
gtttttctgctggactacataattattcaacagggtggcctctttgaaaa
aaggtaAACTGAAATTTCACACACAGGTTTATTTATTTAGGTgcaaaaac
aacataaaaacTAGGAAACATTTTCCATACATTGATGCACTGACTACTCA
GAGGTGACCAACATGAAATTGGAGGTCGGGACAACTGTTGAAATTCAACG
ATCTGATGGGCGTATACACTCAGCTAGTGTCAGTGGTGTTGATTTTGTTG
GACAAAATGTTACTGTAGAGTGGTTTGAATTTGGTGAAACAAAGGGAAAA
GAGATCAACTTGGATCAAGTATACTCTTTGAATCCCCAATTCAATCCTAA
AGCAGCAAAAACCAGCAAGCGACAATCTCTGCCACACCATGGTGGAGGTG
GGGGTGGTATTCCTACACGGAAAGAAGCAACAAATTCTCCAAGTGTTTCA
CGCCCAGCTAGAAATTTACGATCAAAATCAATGGTTCCTACAGCACAACA
GCAACAACACAGTGGAGCGGTCAAAAACAGCCGTGCATACTCACGTAAAC
AAGACAGTGTGGAAGACTCAGATGAAACTGCCATCATGAGTAAACCTAtg
gagaaagaaaacaaaaaacctGCACCTGGAGTAGCGAAAAGTCGACGATC
AAATTGTGTGAAAGAGGTGGAAAGGCTAAAACAAAACAGAGAAAATAGAA
GAGCTCGTCAATCTGAAGTCAAGAAAGAACAAGAGCAAATCAAATCAGAA
CTAGACCCAAGTAATCCAAACtggcaatttttgaaaatgatcttAGACTA
TCAAGCAACCATGGGTGAACTACAGCATATTGGACTAAATGATCCTatAA
TAGACCATCAAATTTGTGTATGCGTTAGGAAAAGACCGCTCAACAAAAAA
GAAAACGCCAAGAAAGATATCGATATTGTGGCTGGTGCCGACAAACAAAC
GACCATTGTACACGAGTGTAAGCTGAAAGTTGACCTAACAAAATACTTAG
ATAATCATAAATTTCGTTTCGATTACTCGTTCGACGAGACGGCTACCAAC
GAGATTGTTTACCGTTACACAGCCAAACCGCTAGTAGACAGTATTTTCAA
CCAAGGGATGGCCACCTGTTTCGCTTATGGACAAACGGGTAGTGGAAAAA
cacatACGATGGGCGGTGATTTCACGCAAGGGAAACAACAAGATAGTAGC
AAAGGAATCTATTGTTTAGCAGCGAACGACATCTTCAAATTGCAGAAAAC
GAAATACAAATCTCTAGACTTGATTGTCTCCGCAAGTTTCTTCGAAATCT
ATAGTGGAAAAATATTCGATTTACTGAACAAACGAAAGAAATTACAAGTC
TTGGAAGATGGGAAAGCACAAGTACAGATTCCAAACTTAAACGAAACGAC
CGTCCACAATGTAAACGATGTCATGAAATTATTGGACCAAGGCATGAAAA
CCAGGACCTCAGGAACAACGTCAGCCAATCAAAATTCATCTCGTTCTCAC
GCTATCTTCCAAATGATCCTCAGAAAAAGgGGCCATGGTAAAGATGGTAG
TATGGGATCGTTACACGGAAAATTCTCTCTCATTGATTTAGCAGGTAACG
AGCGTGGAGCAGACACGATGAGCTCTGATCGACAAACCAGGTTGGAAGGA
GCAGAAATCAACAAAAGTCTCCTCGCCCTCAAAGAATGCATTCGTGCTCT
TGGGAAGAAAGGCGCCCATCTACCCTTCCGTGCAAGTAAACTGACTCAGG
TTCTTCGCGATTCGTTCATCGGTGAAAATGCCAAGACATGTATGATTGCC
ATGATTTCTCCTGGTTTGAGTTGCGTTGAACACACACTAAACACACTGCG
CTATGCTGACAGAGCGAAGGAGCTTGGGCCCGATGGAAGAAG
Run BLAST on NCBI

transcript from alignment at sc0000101:281563..293894-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00010023 ID=TCONS_00010023|Name=TCONS_00010023|organism=Clytia hemisphaerica|type=transcript|length=12332bp|location=Sequence derived from alignment at sc0000101:281563..293894- (Clytia hemisphaerica)
TGGGTTTACAATAGACCTTTTTTCAAAGAGGACGTCCTGTTGAATAATTA
TGTAGTCCAGCCATAAAAACAATGATAGAGCCATGCATTGTTTTATTATT
GTTTTTCTGCTGGACTACATAATTATTCAACAGGGTGGCCTCTTTGAAAA
AAGGTAAACTGAAATTTCACACACAGGTTTATTTATTTAGGTGCAAAAAC
AACATAAAAACTAGGAAACATTTTCCATACATTGATGCACTGACTACTCA
GAGGTGACCAACATGAAATTGGAGGTCGGGACAACTGTTGAAATTCAACG
ATCTGATGGTAAACTATTCTTTATTATTGTAGCTGTTTCTTCGTTGTTCA
TTCATTCAGACATTTTCAAGCTTTTTTAAGTGTCTAGTTGTCAAACCCAT
CTTGAATTCACTAAAAATATTCAAAAACAATTCTTTTGTTGCTTTTATTG
TCATTAAAACTCATGGTTGATAAACTTCTTTTTTATAATTATGATCTGCT
GGAACAGGCCAAAACAAATTATGTATTGATGAAATTTTTTTTCTCCACTT
GCAGGGCGTATACACTCAGCTAGTGTCAGTGGTGTTGATTTTGTTGGACA
AAATGTTACTGTAGAGTGGTTTGAATTTGGTGAAACAAAGGGAAAAGAGG
TGAATTCTATTATTTCACAAACTTGTTTCTTGGTCAATTCCAAATGTCTA
AAGATCTTAATAAGAAAGTACTCGCTTGTAATTTTTCATCAGTCTGTTTG
CCCGTCTGTCTTCATGTCTACAGTCTAAAGACGAATTATACAGGGTGTCC
GGAAAAGAAGTATTGAGTCGTACCACTTCTATAGAAAGAAAGTTCTTGTG
TGTGTTTCACTAAATTTTCAATGTTTATCAAAGTTTCTCTTTGTGTCATA
TTGATTGTCATGAGACATCTTTTATGAACAACCTTTACAAAAAACAATTC
TCAATAACTTTAATGTTATGAAAATTGTAATCAAAAAGCTAATTCATAAT
GAATGTCGTAAAAACAATTATTGTGTTAGTATATATTTTCTTACATTTTG
TTAAACACACGCAACAACCTTCTACTCAGAATCATGTTCGAACTCGATAC
TTTTTTTCCGGACACCCCGTAGAAGAAATTAATCACAAACTCTTCTTCTT
CTTTGTTTAGAATACCTGTGTTGTTTTTCTTTGTTTTTTAAAAATATAGA
TTTTTACGTTGATTCTTTTGTCAAGAAATTTCCACTCAAGTTATCTGTTG
TTGTCCAGGGATACATAGCTTTGTACTTATTTTATAAATAATCCATTTCT
GCAGCTGATAAAACGTTATTTTACCCTATTTTTTTTAGATCAACTTGGAT
CAAGTATACTCTTTGAATCCCCAATTCAATCCTAAAGCAGCAAAAACCAG
CAAGCGACAATCTCTGCCACACCATGGTGGAGGTGGGGGTGGTATTCCTG
TAAGAATCTTTCATTTTCATCCTTGCTCTCAATTTAGTTCCGCTTGTGGT
GGTGTTGGTGGTGGGAGATAGAAGTGAGGGATTCTGTCCTCTTTTTTGGT
CATGCTAGAGGTGAAGGGAGTGCCAGGCCTACTCTCAGTTCCCAGTAACT
TACCACTTCAATCAAATATTTAATCTAATCTACTCATAATTGAGTTTGAA
GCAACGAGAGAACTTATACCTGGAACCCTTTGTTTCTTGAAAGGTGAATG
GTCTACTAACTGATCTACCCATTGCACTTGCTATTAGACTTCCAAGTACC
GAAAAGGGCTTGTCAATGGGGATCCAAGTTACACCACGTTATAGAAATGA
TGAAAAGAAGAATCTATAGCCTCACTGAAAATTCATTTTCAACTCATGTC
CTTTTCTACTCTCTTATTCTAGACACGGAAAGAAGCAACAAATTCTCCAA
GTGTTTCACGCCCAGCTAGAAGTAGGTTTGGTTTTTTAAAATACAATATG
TTTCATTGATGAATAAGCAACAAAACACTATTTTTGTTTTCTTTAAAAAT
TTAATCCCATATTGTTGATATTGAGCAAGATTATAGCTTGTTGAACCGAA
ACAAAAGAAATTAATTGATAAAATTGTATTCTCTTTATTCAAACCTTGCT
CTTCAACAACAGATTTACGATCAAAATCAATGGTTCCTACAGCACAACAG
CAACAACACAGTGGAGCGGTCAAAAACAGCCGTGCATACTCACGTAAACA
AGACAGTGTGGAAGACTCAGATGAAACTGCCATCATGAGTAAACCTATGG
AGAAAGAAAACAAAAAACCTGCACCTGGAGGTAATCTTAAAGTTGCAATT
GTTTATTTTTCTAGTTATGTTAAAGTAAAACTGGGCATCCTTAATAATAT
TTGCACTGTTGTGAAATTGGAACTGGAAGAGCTAATAAATAGATTTCTGA
GGACATGTGTTTCTTATATTAGTAGATTGCCTTATCCAGTCCCTCAATGA
GCTGAATCAAGTAGACTAGTCGAAGCTTTGAGGCAAAAAATAATGAAATA
TAAACAAACCAAAGATCAGTCTTTAACAAACAAGGTTCTGATATTTATAG
ATATTTAACAGTCAAATATTATTTTTTCTGAATTTAGTAGCGAAAAGTCG
ACGATCAAATTGTGTGAAAGAGGTGGAAAGGCTAAAACAAAACAGAGAAA
ATAGAAGGTAAGGTCATTATTTTGCATTAGAAATAATGTATCATCCTGAA
TAATACTGTGTTTTGAAGAAAAATTTGGATGAATTGAGTTCTCAGATTCT
CTATCAGTACATTGAGAGTTTTCAATTTTTTCTATTTAAAAACTTTATTT
TCCAGAGCTCGTCAATCTGAAGTCAAGAAAGAACAAGAGCAAATCAAATC
AGAACTAGACCCAAGTAATCCAAACTGGCAATTTTTGAAAATGATCTTAG
ACTATCAAGCAACCATGGGTGAACTACAGCATATTGGACTAAATGATCCT
GTAAGTTTTAATTGTCTCTTTATATCAAGGTGCCTTACCTGAGAAACACT
ATTCTACAGATAGTTAGTTCTAACGTCCAGGCAGGCAAGTACCCAAACAC
TTTAGTCACTACAAAGCTGTTTTTGACTCGGAAATTCAGTTTTGGTGTTC
TGAGTAACTATTTTAGGTGGTTGATACATGTCGCAGATAGAAATCAAATG
TTTTTTAAAACCTCCCTGTCACCCCACCTGGGCCCATTATAAATGGGGTT
ATATCTTTAAAGCTGGGCTGGACTTAAAAGTCCAGCCTTGTCTTCAATGG
TTAAACATGTGTCTAAAAGATAAAAAAACTTTAATTTAATGTATTGAATT
GAATTTCATTCATCGTAGAGAGTCAACTAGCACTTACATTTTTTCTTGCG
AAATAGAAACTCAAATATTAGCTTTTAAAATTAAATTCGAAATTGAATAT
TTTGGCTGTGTATAGCTGCAACAAAGAATTGCTTGGGATCTTTTACTTCT
AATTTTATTGATATCCTCTTCATTGTATTGTTGTGAATCGATGCTTTAAA
GTTAATTTCCCTTGTATCTTTTTTAAATCTAGATAATAGACCATCAAATT
TGTGTATGCGTTAGGAAAAGACCGCTCAACAAAAAAGGTAAAGTGAATGA
GGTCTCTTTTAAAAAAAGTCCTTGCAGCCTTTCTAACCCCCTAGATAAAA
AATTTAGAGACGGATTTACTGTAGCTACATTTTCTGGTCGTCTTTCTTTG
CTTCATAGAGTTGTATACACAATAAATATCCCTCTTTTCTCTGTAGAAAA
CGCCAAGAAAGATATCGATATTGTGGCTGGTGCCGACAAACAAACGACCA
TTGTATGTCTCCTTCTTTTTCATACAATAATATAATAAAGAGTGTTGCTG
CGCTGTGTGGTTTCTCAGTGATATTTTAAGTTATTTTGACATCATCTTCA
TGTAGATTATCTGTTTTCATTAATGACATGTTTGAGGGAAAATTAATGTT
TACCAACATTAGTTTCATTCGTTGGGGTCCTTTTAGTTCCGGGGGATCTT
TTCACTCAGTAAGGGAGAAAAAGAAATACAAGTTTACATTCTATTTCGAG
AGTGGTGATATTTTAAATTCCCAATACACCTTTTCGACCATAGCTGTCAA
TTGATGCGCAGGCATTTTTGTCCGCTTTATCCCACGAAAACCGTCCCAGT
CCTTTTTCCGTACGTCTATAGACAATAGAAAAAATTGCCAAAAAAGGATT
GAATCGAGTTTAAGGGATGATTAAATAATTAAGTGGCACGCGCCTGACCG
CGCGACTACGGTTGAAAAATTGTATTGAGGTGAGTTATTTTCCCAACAAT
TTTTGTGTACTGCTCTACGATAATTTGATTTGATTCAAACAATGACACTT
TTTAATTACTTTGCAGGTACACGAGTGTAAGCTGAAAGTTGACCTAACAA
AATACTTAGATAATCATAAATTTCGGTAATTGTTAGCATTTTTAATATAG
AACATTAATTTTGTTTTTATTTTAGTTTTTGTTTGTGAGTGTTTTCTGGA
GAAAAAATTACAGAAGTTTTGCATGAGACATTTTTATGAGCTCCATTAAA
ACTACTCGTTTCTCAGAATTGTCAAAAACCGGAACGTCGTGGTTACCAAG
GTTTCTCTCTAAGACTAAATAAAAGCCATTTTATTGCTCTAAGCTGACAT
AAGAACAAAAACTTTGTTCTCATTCTACCCTTGTTCTTTTCACTAGTTTC
GATTACTCGTTCGACGAGACGGCTACCAACGAGATTGTTTACCGTTACAC
AGCCAAACCGCTAGTAGACAGTATTTTCAACCAAGGGATGGCCACCTGTT
TCGCTTATGGACAAACGGGTAGTGGAAAAACACATGTAAGTTTTTATTGT
GAGAATATGACCTCAAGTTCAATTCAATCGTGAATGGAGCGATGGCCAAG
GTGTCAGTGCCTCAAATCAGGGGTTCGTGGTTTTAATCCTTGATTCTTCA
TATGGTCCGTTCAGATCAAATATATCTGAGCTAACTAGCTGTGTACCTAA
TAAAAGCAATCAAAAGTCCTACTGGGCTATCTACGTAAAATAACGAATCG
TTTTATAAACATTTCCGCTTTTCCCCTTGTGACTCATAAATCTATACTCA
TATGAACTCCATTACGCCATTTTACCATGTGTCTCCTTTGAGCTTTTACT
TATCTATACATTTGAGAAGAATTTAAAAGACACCCTCAAATTTTTACCTA
GCTTTTGACAATATTTCTTACAGACGATGGGCGGTGATTTCACGCAAGGG
AAACAACAAGATAGTAGCAAAGGAATCTATTGTTTAGCAGGTAAGACGTT
TGAAGTCTTTTAGGATGTTGCATCATTTGCTTTTTAGAATGGTAAATTGT
TTATCTTTTGAAGTAAAAAATTGTAGGGCCAGGCCAAATCGGTCCAACAT
TTCATCCAACATGATTTTCCAATGTTGGATGAAATGTTTGATGGAAAAAC
TTGCGTTGGATGAAGCGAAAATCAATGCCGGGGCAAACCGATCCAACATT
TCATCCAACATGATTTTCCAATGTTGGATGAAATGTTTGATGGAAAAACT
TGCGTTGGATGAAGCGAAAATCAATGCCGGGGCAAACCGATCCAACATTT
CATCCGACATGACTTGGAAAAAGATGAAAATTCAAAAAAATAAAGAAAAA
AGTACCACCAAACCAATCCAACACGAAAAATTACACAATTCAATGAGAGA
GCTTCTTTGATCTCGGCGCAAATGTTGGATGAAATGTTTGATAGCGATCA
AACTTCATCCAACGTCGTCCAACACGATTTTTTTCTTCTTTTTTTGAATT
TTCTCTTTTTTCTTCAAAGAATTTGAATTTACGCAAACTGATCCAACATT
TCATCCAACATCAGAAAAAAGGCATGTTGGATGAAATGTTGGATCGGTTT
GCCCAGGTCTTAAACGTAACCCTTCAAAAGTGATTTCTTTGATATTGGAG
CCTTCTCTGGTCAGTTTAGAGCTTTTTATTTACATCCAAGCCAGACATGA
TGTTCCATCGGAGATGTTTTAAACCATGATATGTGAAGTTTGACTGCTAT
CACTAAACTAAGAAACTAAAAAACATTACATGTATATTCTTCTACTTTTT
CAGCGAACGACATCTTCAAATTGCAGAAAACGAAATACAAATCTCTAGAC
TTGATTGTCTCCGCAAGTTTCTTCGAAATCTATAGTGGAAAAGTAAATAA
TTGCTTTATCCTTGTTTGGTTGTTCCATTACACTCTTTAAAAAAAATGAT
TCTACACATTGCAAACACTGACCTTTATATACCCTAGACCAAGCTATATC
TGCCATCTTTGATCGAAGTTTTTTTTGAATTGGTACCCGAGAAGAAGCCA
TTGCAATGTTAAAAATTAACGTCTAACGGCGCTACATCATCAAAAGTTTT
CGAGAGAAAGTAGATCTAGCGCTCTCGATGCATTTACACCGCGATTGAGA
AGTGCCGCCATTAGGGTACCACTTTTCAAAAAACTCTGATCAAAGATTTT
GCTTGGCCGGGATTAAGAAGCTTGGTCCAGGTTATATAAAGGTCAGTGAT
TGCAAACTAGGACAGTCTTATTGCTACATTTATTGACAGTAGTCTCTTCT
CGGATGCTGGAACTCCCAAACAATTATTCTTGATGTATTTACTTTCTTGA
TGCATTCTTTTTGATAGATATTCGATTTACTGAACAAACGAAAGAAATTA
CAAGTCTTGGAAGATGGGAAAGCACAAGTACAGGTTAGAAAATAAATAAA
ACAAAGAAAATTGACTGAAGTAATAATACCAATGCACATAAGTCATCCAT
AGCGGCATTAAGGAAAGCAATATCTGAATTTCCACTTTGGTAGTACTGCA
CTACAGTTTCTTCCCTTTAATTCGATATTCAAGGGACCAAGACATTTCTT
CGAATTAGAGAAAAATTCGAATTATAGAGAGCGTTTTACACTACTATCCA
GCTTAGGGAACCAATGTTTTAGTTCGAATTACAGAAAGGGTCGAATCAAA
GAGGTATTATGAGGAAAATTGACTGCATTTCTTTTCGACTGCAAAAATTT
AATTCCAAACTCGTTTCATTATTGGATAATGCCTTATTTTAGATTCCAAA
CTTAAACGAAACGACCGTCCACAATGTAAACGATGTCATGAAATTATTGG
ACCAAGGCATGAAAACCAGGACCTCAGGAACAACGTCAGCCAATCAAAAT
TCATCTCGTTCTCACGCTATCTTCCAAATGATCCTCAGAAAAAGGTGAAA
TAAGAATTTCTTTAAGAAGACGATCTCACTCAAAACCTTGTAATATCCCA
AACTAAAAGATATCATTTAATGCAACTTCTACCATTTGCTTACACATCGT
TCTTTAACAAAAGATAAAAAGAAAAGACAAGAACAAATTTCTGCCGCTCC
TTGCCAGCACAGTTTCTTCGGGTTTGTCAGCATAAGAAGCGCACCTGATT
TGTATGTCATCAAAATTCTAAGTTTGTTCTCGTTGTTTTTGCGAACCTTG
AAAACCTCAACTGCTTTTTGTACTAAGTACAGTGTAGAAAAGAAGAATTT
GGTATCAGATATAAATATTATTTTGTTTTTTTTAACCCTTTAAGTGCCGA
TGTCGTATATATACGACATGGGCTATATAGGAGGGNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNCCTTCTAGATCAGGAGATATAAGCCCTTAAAGTTTGAACTAGCGAT
TTTTTAAAAAAAACTTAGAAAAAAGGACCCTGGCACTCAAAGGGTTAAAG
ATCAATGTTGGTTTCGTCAAAGGTTAGTCTAGCAAGCTAGACGACTAATT
TATACATAGTAGAAATAAAGCAAAAAGTAATGAATGGAACAATTTNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNGTCTAGAAACCTTTGTGCACTAACTCCAAACAAAAGA
AAAGTGTCAATATTGCAATTATAATTTTTTCCTGCTCAAAATAATTCTTG
AGAAAAAAGAATAAGTGTGGATTTGTGTATTGAAAGTTTTTCATTTGAGT
TGATTTCGTGTAGCTAGTCCCTGTATCTCTAAGGCTGGAACACCGGATTC
TTCCAGTCGTTTATACAAACTAAATCCCGTATTATTAATATTATTGTTAT
TAGTATTGGTATTATTAGTATTACACGCATTATAAACGACTCCAGTCTAG
TCAAAGGTCAAAAATACTTTTCTGTAACTTTAACTTCTTAACACAGTTTT
GTTTTTTCTTTAGGGGCCATGGTAAAGATGGTAGTATGGGATCGTTACAC
GGAAAATTCTCTCTCATTGATTTAGCAGGTTCGTACTATGCCATTCTATA
TTAATTTTTTTTTTGAGATGATGAAATATACTTTAGGTCTTTAAGATTTC
GGATGAATCCGGAAGAAGAAACATTTGAAGACCGGCGGTGATGCAAACCG
TTTCGAAGAATAATTTCAAAGATTAATGAGAAGGGATTGATTCTTTGACT
AATGTTTTGTTTTGGTTGCCAGGTAACGAGCGTGGAGCAGACACGATGAG
CTCTGATCGACAAACCAGGTTGGAAGGAGCAGAAATCAACAAAAGTCTCC
TCGCCCTCAAAGTATGCGGATCTTTTTCAAACCCATAGACTCTAAGAGAG
GGGGGGGGGGAAAAAAAACCAAAACCAAAAAATTTTTTTTTTTTCGGGTT
TTTTCCCCCCCCCCCAAAAGGTTGGGGGTTTTTTTCAACCCCATAGACTC
TAAGAGAGGGGGGGGGGGAAAAAAAACCAAAACCAAAAAATTTTTTTTTT
TTCGGGTTTTTTCCCCCCCCCCCAAAAGGTTGGGGGTTTTTTTCAACCCC
ATAGACTCTAAGAGAGGGGGGGGGGGAAAAAAAACCAAAACCAAAAAATT
TTTTTTTTTTCGGGTTTTTTCCCCCCCCCCCAAAAGGTTGGGGGTTTTTT
TCAACCCCATAGACTCTAAGAGAGGGGGGGGGGGAAAAAAAACCAAAACC
AAAAAATTTTTTTTTTTTCGGGTTTTTTCCCCCCCCCCCAAAAGGTTGGG
GGTTTTTTTCAACCCCATAGACTCTAAGAGAGGGGGGGGGGGAAAAAAAA
CCAAAACCAAAAAATTTTTTTTTTTTCGGGTTTTTTCCCCCCCCCCCAAA
AGGTTGGGGGTTTTTTTCAACCCCATAGACTCTAAGAGAGGGGGGGGGGG
AAAAAAAACCAAAACCAAAAAATTTTTTTTTTTTCGGGTTTTTTCCCCCC
CCCCCAAAAGGTTGGGGGTTTTTTTCAACCCCATAGACTCTAAGAGAGGG
GGGGGGGGAAAAAGACCGGAATACCGATAATTTTTTCGTAAAATACCGGC
GTTTCGATCAAAATGTACCGACCAGTACAAAAATACCGGGCATAAGGCCT
TTCAATACCGGACATTTTTCCCGTCAAATGCCGGCATACCGGTAAATACC
ATCTCAGAAGCCCCCTCCCTAGTGAAGAGAAAGAAATCTCCGCCAGCCTA
CCTTTGATCACACTTCCCGTTAACCTTCTTTAACTGTGATAGGGTTTCGA
TGCAATTATAAACAGCTAAGAAACTGAAATAGTGCTTCATTGTTGCATAG
TTCAACTACATTGTCAACAAAACTAACGCTTTTGTAATGTTTTGCACCAA
ATTAATAATTTTTTGCTCTCAATAGGAATGCATTCGTGCTCTTGGGAAGA
AAGGCGCCCATCTACCCTTCCGTGCAAGTAAACTGACTCAGGTTCGTTAA
CAATTTTTTTTTAAATTCAAATAAAAGTTAACTGCGATTACACCTGAGTT
AAATCTAAAGCCGTCAAAAAGTCAAAGATTACTAGGCGCTATCTTCTACT
ATAGATCTGTAACTAAACTCGATGACTATTTCAAAGCAAGGATTCTGTAT
TTTCTTTGAAGGTTTTGTAGATTCCTTGTTTATTATTTAGGTTCTTCGCG
ATTCGTTCATCGGTGAAAATGCCAAGACATGTATGGTGAGTATGTCTCTC
TCTAGTGTCACTTTACTTTGAAGCAGTAAGTAGTAAAGTAAGTTTCCGAC
CGCAGTCGAGAACAAACCAAAGACTCTTTTCTCTAGCTGTCTACATGAAG
GTAGGGGAGGGCGCCACTCTTTTTCCAAAATTTCTCCACTTACCCTTGAT
CCTTCTCCTAATTGCTGAGCATCAAGCAGAGAGACATCAAGTACCATTTT
GAGAATCTTTGGTATGACCCGGCAGTGGTCGGACCCACATCCTTACTCAC
CGTAGCTAGATACTCTACCTTCATGCTACGGTCGGTCTTTGAAAACAGGA
GAGTTCAAAGCTCTCACAGGACTAGAATTGGTAGCTACTAATTCGGCCGT
TGAATCATTTGTAACCAATATCTTCCATTTTAGATTGCCATGATTTCTCC
TGGTTTGAGTTGCGTTGAACACACACTAAACACACTGCGCTATGCTGACA
GGTTTGCTGTTTTTCTATGATGTATTTTTGAGGATTCTCAAACCTGAGAG
AATCTTTGATCTTAATTCATGATTCTCATGGTTTTAGAACAACCAGAAAG
AGAAATGCACTTTTTTTCATAAGGAACGCATTTATAAGGAACTTGAGGCT
GAAAATGGTTAAAAAAAATAAGAAATTTTTAAGGATCTGCTCAGGCTCAC
AAAAAGAAATTAAGTTAAGGAACAGTATAAACTTGAACTTGCATATATTT
ACAATAACCTAAACAAAAAGATGATGAATTCTTTCTGACACGACATACAA
TGTGTCGAAAAGAGAAAATTTACAGAAGTTATTCAGAAGTTTCATACTAA
GCAAATCCTAACTTAACAGCTAAGTAAATAAGGAACTATAGATGAGGAAC
TTTGAGGCTGAAATTCTCTGGACAAATAAGGAACTCCAGGCTCAGAGCCA
AGTTAAGGTTCCTTTTTAGGATCGTCATTATCACTTTCACCGCACTCCTT
CTTCGCCCCAGAGTTTAAATGCTTCCTCTACGACCAGAAAGCCTGTCGTT
TGAATATTATTCACAAAAGTTGATTTCTTTGCCTAACGCGCTCGGTGTAC
AACCTTAGAAGTCAGTCAACTCTCTAATTCGAACCTTTACAATTCGAATC
TTTCTTTAATTCGAATTAAAAATATTGGCCTCCTCAGCTGGGAAGTAGTG
TAAAATATTCTCTATAATTCGAATCTTTCTATAATTCGTCGGAAGTCTTA
GTTCCTTAAAGATTGAATTTATAGAGGCAACTGTATCACTTTTCCCCTGC
AGAGCGAAGGAGCTTGGGCCCGATGGAAGAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005618XLOC_005618Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00010023-exon-sc0000101-1575043694:293587..293894TCONS_00010023-exon-sc0000101-1575043694:293587..293894Clytia hemisphaericaexon
TCONS_00010023-exon-sc0000101-1575043694:293246..293340TCONS_00010023-exon-sc0000101-1575043694:293246..293340Clytia hemisphaericaexon
TCONS_00010023-exon-sc0000101-1575043694:292446..292556TCONS_00010023-exon-sc0000101-1575043694:292446..292556Clytia hemisphaericaexon
TCONS_00010023-exon-sc0000101-1575043694:291974..292022TCONS_00010023-exon-sc0000101-1575043694:291974..292022Clytia hemisphaericaexon
TCONS_00010023-exon-sc0000101-1575043694:291615..291782TCONS_00010023-exon-sc0000101-1575043694:291615..291782Clytia hemisphaericaexon
TCONS_00010023-exon-sc0000101-1575043694:291238..291307TCONS_00010023-exon-sc0000101-1575043694:291238..291307Clytia hemisphaericaexon
TCONS_00010023-exon-sc0000101-1575043694:290945..291089TCONS_00010023-exon-sc0000101-1575043694:290945..291089Clytia hemisphaericaexon
TCONS_00010023-exon-sc0000101-1575043694:290308..290362TCONS_00010023-exon-sc0000101-1575043694:290308..290362Clytia hemisphaericaexon
TCONS_00010023-exon-sc0000101-1575043694:290093..290148TCONS_00010023-exon-sc0000101-1575043694:290093..290148Clytia hemisphaericaexon
TCONS_00010023-exon-sc0000101-1575043694:289470..289528TCONS_00010023-exon-sc0000101-1575043694:289470..289528Clytia hemisphaericaexon
TCONS_00010023-exon-sc0000101-1575043694:289060..289198TCONS_00010023-exon-sc0000101-1575043694:289060..289198Clytia hemisphaericaexon
TCONS_00010023-exon-sc0000101-1575043694:288605..288671TCONS_00010023-exon-sc0000101-1575043694:288605..288671Clytia hemisphaericaexon
TCONS_00010023-exon-sc0000101-1575043694:287703..287791TCONS_00010023-exon-sc0000101-1575043694:287703..287791Clytia hemisphaericaexon
TCONS_00010023-exon-sc0000101-1575043694:287162..287227TCONS_00010023-exon-sc0000101-1575043694:287162..287227Clytia hemisphaericaexon
TCONS_00010023-exon-sc0000101-1575043694:286651..286802TCONS_00010023-exon-sc0000101-1575043694:286651..286802Clytia hemisphaericaexon
TCONS_00010023-exon-sc0000101-1575043694:284517..284581TCONS_00010023-exon-sc0000101-1575043694:284517..284581Clytia hemisphaericaexon
TCONS_00010023-exon-sc0000101-1575043694:284234..284322TCONS_00010023-exon-sc0000101-1575043694:284234..284322Clytia hemisphaericaexon
TCONS_00010023-exon-sc0000101-1575043694:283104..283169TCONS_00010023-exon-sc0000101-1575043694:283104..283169Clytia hemisphaericaexon
TCONS_00010023-exon-sc0000101-1575043694:282860..282904TCONS_00010023-exon-sc0000101-1575043694:282860..282904Clytia hemisphaericaexon
TCONS_00010023-exon-sc0000101-1575043694:282394..282461TCONS_00010023-exon-sc0000101-1575043694:282394..282461Clytia hemisphaericaexon
TCONS_00010023-exon-sc0000101-1575043694:281563..281592TCONS_00010023-exon-sc0000101-1575043694:281563..281592Clytia hemisphaericaexon
TCONS_00010023-exon-sc0000101-1510915933:293587..293894TCONS_00010023-exon-sc0000101-1510915933:293587..293894Clytia hemisphaericaexon
TCONS_00010023-exon-sc0000101-1510915933:293246..293340TCONS_00010023-exon-sc0000101-1510915933:293246..293340Clytia hemisphaericaexon
TCONS_00010023-exon-sc0000101-1510915933:292446..292556TCONS_00010023-exon-sc0000101-1510915933:292446..292556Clytia hemisphaericaexon
TCONS_00010023-exon-sc0000101-1510915933:291974..292022TCONS_00010023-exon-sc0000101-1510915933:291974..292022Clytia hemisphaericaexon
TCONS_00010023-exon-sc0000101-1510915933:291615..291782TCONS_00010023-exon-sc0000101-1510915933:291615..291782Clytia hemisphaericaexon
TCONS_00010023-exon-sc0000101-1510915933:291238..291307TCONS_00010023-exon-sc0000101-1510915933:291238..291307Clytia hemisphaericaexon
TCONS_00010023-exon-sc0000101-1510915933:290945..291089TCONS_00010023-exon-sc0000101-1510915933:290945..291089Clytia hemisphaericaexon
TCONS_00010023-exon-sc0000101-1510915933:290308..290362TCONS_00010023-exon-sc0000101-1510915933:290308..290362Clytia hemisphaericaexon
TCONS_00010023-exon-sc0000101-1510915933:290093..290148TCONS_00010023-exon-sc0000101-1510915933:290093..290148Clytia hemisphaericaexon
TCONS_00010023-exon-sc0000101-1510915933:289470..289528TCONS_00010023-exon-sc0000101-1510915933:289470..289528Clytia hemisphaericaexon
TCONS_00010023-exon-sc0000101-1510915933:289060..289198TCONS_00010023-exon-sc0000101-1510915933:289060..289198Clytia hemisphaericaexon
TCONS_00010023-exon-sc0000101-1510915933:288605..288671TCONS_00010023-exon-sc0000101-1510915933:288605..288671Clytia hemisphaericaexon
TCONS_00010023-exon-sc0000101-1510915933:287703..287791TCONS_00010023-exon-sc0000101-1510915933:287703..287791Clytia hemisphaericaexon
TCONS_00010023-exon-sc0000101-1510915933:287162..287227TCONS_00010023-exon-sc0000101-1510915933:287162..287227Clytia hemisphaericaexon
TCONS_00010023-exon-sc0000101-1510915933:286651..286802TCONS_00010023-exon-sc0000101-1510915933:286651..286802Clytia hemisphaericaexon
TCONS_00010023-exon-sc0000101-1510915933:284517..284581TCONS_00010023-exon-sc0000101-1510915933:284517..284581Clytia hemisphaericaexon
TCONS_00010023-exon-sc0000101-1510915933:284234..284322TCONS_00010023-exon-sc0000101-1510915933:284234..284322Clytia hemisphaericaexon
TCONS_00010023-exon-sc0000101-1510915933:283104..283169TCONS_00010023-exon-sc0000101-1510915933:283104..283169Clytia hemisphaericaexon
TCONS_00010023-exon-sc0000101-1510915933:282860..282904TCONS_00010023-exon-sc0000101-1510915933:282860..282904Clytia hemisphaericaexon
TCONS_00010023-exon-sc0000101-1510915933:282394..282461TCONS_00010023-exon-sc0000101-1510915933:282394..282461Clytia hemisphaericaexon
TCONS_00010023-exon-sc0000101-1510915933:281563..281592TCONS_00010023-exon-sc0000101-1510915933:281563..281592Clytia hemisphaericaexon
TCONS_00010023-exon-sc0000101-1491911889:293587..293894TCONS_00010023-exon-sc0000101-1491911889:293587..293894Clytia hemisphaericaexon
TCONS_00010023-exon-sc0000101-1491911889:293246..293340TCONS_00010023-exon-sc0000101-1491911889:293246..293340Clytia hemisphaericaexon
TCONS_00010023-exon-sc0000101-1491911889:292446..292556TCONS_00010023-exon-sc0000101-1491911889:292446..292556Clytia hemisphaericaexon
TCONS_00010023-exon-sc0000101-1491911889:291974..292022TCONS_00010023-exon-sc0000101-1491911889:291974..292022Clytia hemisphaericaexon
TCONS_00010023-exon-sc0000101-1491911889:291615..291782TCONS_00010023-exon-sc0000101-1491911889:291615..291782Clytia hemisphaericaexon
TCONS_00010023-exon-sc0000101-1491911889:291238..291307TCONS_00010023-exon-sc0000101-1491911889:291238..291307Clytia hemisphaericaexon
TCONS_00010023-exon-sc0000101-1491911889:290945..291089TCONS_00010023-exon-sc0000101-1491911889:290945..291089Clytia hemisphaericaexon
TCONS_00010023-exon-sc0000101-1491911889:290308..290362TCONS_00010023-exon-sc0000101-1491911889:290308..290362Clytia hemisphaericaexon
TCONS_00010023-exon-sc0000101-1491911889:290093..290148TCONS_00010023-exon-sc0000101-1491911889:290093..290148Clytia hemisphaericaexon
TCONS_00010023-exon-sc0000101-1491911889:289470..289528TCONS_00010023-exon-sc0000101-1491911889:289470..289528Clytia hemisphaericaexon
TCONS_00010023-exon-sc0000101-1491911889:289060..289198TCONS_00010023-exon-sc0000101-1491911889:289060..289198Clytia hemisphaericaexon
TCONS_00010023-exon-sc0000101-1491911889:288605..288671TCONS_00010023-exon-sc0000101-1491911889:288605..288671Clytia hemisphaericaexon
TCONS_00010023-exon-sc0000101-1491911889:287703..287791TCONS_00010023-exon-sc0000101-1491911889:287703..287791Clytia hemisphaericaexon
TCONS_00010023-exon-sc0000101-1491911889:287162..287227TCONS_00010023-exon-sc0000101-1491911889:287162..287227Clytia hemisphaericaexon
TCONS_00010023-exon-sc0000101-1491911889:286651..286802TCONS_00010023-exon-sc0000101-1491911889:286651..286802Clytia hemisphaericaexon
TCONS_00010023-exon-sc0000101-1491911889:284517..284581TCONS_00010023-exon-sc0000101-1491911889:284517..284581Clytia hemisphaericaexon
TCONS_00010023-exon-sc0000101-1491911889:284234..284322TCONS_00010023-exon-sc0000101-1491911889:284234..284322Clytia hemisphaericaexon
TCONS_00010023-exon-sc0000101-1491911889:283104..283169TCONS_00010023-exon-sc0000101-1491911889:283104..283169Clytia hemisphaericaexon
TCONS_00010023-exon-sc0000101-1491911889:282860..282904TCONS_00010023-exon-sc0000101-1491911889:282860..282904Clytia hemisphaericaexon
TCONS_00010023-exon-sc0000101-1491911889:282394..282461TCONS_00010023-exon-sc0000101-1491911889:282394..282461Clytia hemisphaericaexon
TCONS_00010023-exon-sc0000101-1491911889:281563..281592TCONS_00010023-exon-sc0000101-1491911889:281563..281592Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000101supercontigsc0000101:281563..293894 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
35.6851	33.1749	44.0233	40.7033	31.7417	25.81	16.7699	17.8619	14.0696	19.4446	23.2357	17.5505	16.5083	19.3542	14.0232	17.1898	15.3781	17.0777	13.7013	13.824	13.5794	14.735	15.9554	17.7914	55.5475	36.8347	11.1075	9.4572	13.223	13.2393
Blast
[Close]
BLAST of TCONS_00010023 vs. Swiss-Prot (Human)
Match: KIF2A (Kinesin-like protein KIF2A OS=Homo sapiens GN=KIF2A PE=1 SV=3)

HSP 1 Score: 607.831 bits (1566), Expect = 0.000e+0
Identity = 311/578 (53.81%), Postives = 412/578 (71.28%), Query Frame = 2 
Query:  266 KLEVGTTVEIQRSDGRIHSASVSGVDFVGQNVTVEWFEFGETKGKEINLDQVYSLNPQFNPKAAKTSKRQSLPHHXXXXXXIPTRKEATNSPSVSRPARNLRSKSMVPTAQQQQHSGAVKNSRA----YSRKQDSVEDSDETAIMSKPMEKENKKPAPGVAKSRRSNCVKEVERLKQNRENRRARQSEVKKEQEQIKSELDPSNPNWQFLKMILDYQATMGELQHIGLNDPIIDHQICVCVRKRPLNKKENAKKDIDIVAGADKQTTIVHECKLKVDLTKYLDNHKFRFDYSFDETATNEIVYRYTAKPLVDSIFNQGMATCFAYGQTGSGKTHTMGGDFTQGKQQDSSKGIYCLAANDIF-KLQKTKYKSLDLIVSASFFEIYSGKIFDLLNKRKKLQVLEDGKAQVQIPNLNETTVHNVNDVMKLLDQGMKTRTSGTTSANQNSSRSHAIFQMILRKRGHGKDGSMGSLHGKFSLIDLAGNERGADTMSSDRQTRLEGAEINKSLLALKECIRALGKKGAHLPFRASKLTQVLRDSFIGENAKTCMIAMISPGLSCVEHTLNTLRYADRAKELGPD 1984
            K+++G  VEI+RSDGRIH A V+ ++   ++VTVEW E G+TKGKEI+L+ ++SLNP   P        ++                  +S  V++  +N R+ + +      + +  V ++RA    +  +  S + +   + +S P++   K+  P     R+SNCVKEVE+L++ RE RR +Q E+++++ Q   ++D +NPN++ + MI D++ ++ + + +   DPI +H+ICVCVRKRPLNKKE   KD+D++    K   +VHE K KVDLT+YL+N  FRFDY+FD++A NE+VYR+TA+PLV++IF +GMATCFAYGQTGSGKTHTMGGDF+ GK QD SKGIY LAA D+F  L+K  YK L+L V A+FFEIYSGK+FDLLN++ KL+VLEDGK QVQ+  L E  V  V DV+KL+D G   RTSG TSAN +SSRSHA+FQ+ILR++        G LHGKFSLIDLAGNERGADT S+DRQTRLEGAEINKSLLALKECIRALG+   H PFRASKLTQVLRDSFIGEN++TCMIA ISPG++  E+TLNTLRYA+R KEL  D
Sbjct:    8 KIQIGIYVEIKRSDGRIHQAMVTSLNEDNESVTVEWIENGDTKGKEIDLESIFSLNPDLVPDEEIEPSPET-------------PPPPASSAKVNKIVKNRRTVASIKNDPPSRDNRVVGSARARPSQFPEQSSSAQQNGSVSDIS-PVQAAKKEFGP--PSRRKSNCVKEVEKLQEKREKRRLQQQELREKRAQ---DVDATNPNYEIMCMIRDFRGSL-DYRPLTTADPIDEHRICVCVRKRPLNKKETQMKDLDVITIPSKDVVMVHEPKQKVDLTRYLENQTFRFDYAFDDSAPNEMVYRFTARPLVETIFERGMATCFAYGQTGSGKTHTMGGDFS-GKNQDCSKGIYALAARDVFLMLKKPNYKKLELQVYATFFEIYSGKVFDLLNRKTKLRVLEDGKQQVQVVGLQEREVKCVEDVLKLIDIGNSCRTSGQTSANAHSSRSHAVFQIILRRK--------GKLHGKFSLIDLAGNERGADTSSADRQTRLEGAEINKSLLALKECIRALGRNKPHTPFRASKLTQVLRDSFIGENSRTCMIATISPGMASCENTLNTLRYANRVKELTVD 556
The following BLAST results are available for this feature:
BLAST of TCONS_00010023 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KIF2A0.000e+053.81Kinesin-like protein KIF2A OS=Homo sapiens GN=KIF2... [more]
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