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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00010062 ID=TCONS_00010062|Name=TCONS_00010062|organism=Clytia hemisphaerica|type=transcript|length=791bp
CAAGTATCAAGAGAATGAGATCTCCAgTCTGTGGAAATTCTGTCATCACA
TTGACGACGATCCAGACAAAGCAGTATTGTGCCCAAGTATCAATAACGCC
TCAGTCATACAAATATACGAAAAACGACCGCCCACAACGCCCGAATGGAT
ACGAGAAGGATATATCCCTGATTGGTTAATGGCTGTTCGAGTTGTCATGA
TAATGGCTGCTGTGTTTGAGTTTATCGCCATAATGGCAGCAGTTTTCACA
CTTTTCATCAAGAAGTTTCATGGTTATATTACCAGCATCTTTAGTTCCAT
TGCGTTTGCTTTACTGCTTGTTGGAGTCTATTTGTATTCCGATCGAACGA
ATTTCGCCGTTGAGGAGTATGCTTGTGGTGTTGGATGGGGCATGGGATTT
TTAGCGGTTATCTTTTCATTCTTGTCAGCTTTCATTGGACTTTGTACGTT
TTAGAATTCCCTTGGAATGTGGCAGAGAAGGGCCATAAGTCcctaatttt
tttataatttatctcagtgtaaagtatttttttactgGTTATCATTATGA
TCATGTTAAAATAAACTATTAAAGATTATTGTTACATAAACTTTATCTTa
catataccttaagggaactaattttaccgagaactaattttcgcggtcga
aaaaatattcaaaaagaatTACATTTTTAGCGTCCtacatttctttttat
aagcaagtgtctgccccttggtcaggctcatatatgcttaagttttcaaa
atgcttacgaatttttgtgaaatttcagaaattttgtaaaa Run BLAST on NCBI transcript from alignment at sc0000102:47570..48627+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00010062 ID=TCONS_00010062|Name=TCONS_00010062|organism=Clytia hemisphaerica|type=transcript|length=1058bp|location=Sequence derived from alignment at sc0000102:47570..48627+ (Clytia hemisphaerica)
CAAGTATCAAGAGAATGAGATCTCCAGTATTACCTTTCTTTCTATGACTG
TTGCTTGttttaatattaaaaaataatcacgTAGGACCATAATTAAagtc
aaaaatttaattctaattttgattcaaaattttgacgttATTTTGTTATC
TTGTCAAGGATAAAATATCTGAAATGGAAAAAAGGCTTCTTATCCCCCTC
TTATCCTCACTAGAACAAAAGATAAGAACAGCTAGAGCTAATTCAAAATG
ATTCTTAACACCAATAACCAAACCAttcatttcaacttttcaggTCTGTG
GAAATTCTGTCATCACATTGACGACGATCCAGACAAAGCAGTATTGTGCC
CAAGTATCAATAACGCCTCAGTCATACAAATATACGAAAAACGACCGCCC
ACAACGCCCGAATGGATACGAGAAGGATATATCCCTGATTGGTTAATGGC
TGTTCGAGTTGTCATGATAATGGCTGCTGTGTTTGAGTTTATCGCCATAA
TGGCAGCAGTTTTCACACTTTTCATCAAGAAGTTTCATGGTTATATTACC
AGCATCTTTAGTTCCATTGCGTTTGCTTTACTGCTTGTTGGAGTCTATTT
GTATTCCGATCGAACGAATTTCGCCGTTGAGGAGTATGCTTGTGGTGTTG
GATGGGGCATGGGATTTTTAGCGGTTATCTTTTCATTCTTGTCAGCTTTC
ATTGGACTTTGTACGTTTTAGAATTCCCTTGGAATGTGGCAGAGAAGGGC
CATAAGTCcctaatttttttataatttatctcagtgtaaagtattttttt
actgGTTATCATTATGATCATGTTAAAATAAACTATTAAAGATTATTGTT
ACATAAACTTTATCTTacatataccttaagggaactaattttaccgagaa
ctaattttcgcggtcgaaaaaatattcaaaaagaatTACATTTTTAGCGT
CCtacatttctttttataagcaagtgtctgccccttggtcaggctcatat
atgcttaagttttcaaaatgcttacgaatttttgtgaaatttcagaaatt
ttgtaaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00010062-exon-sc0000102-1491911889:47570..47595 | TCONS_00010062-exon-sc0000102-1491911889:47570..47595 | Clytia hemisphaerica | exon |
| TCONS_00010062-exon-sc0000102-1510915933:47570..47595 | TCONS_00010062-exon-sc0000102-1510915933:47570..47595 | Clytia hemisphaerica | exon |
| TCONS_00010062-exon-sc0000102-1575043694:47570..47595 | TCONS_00010062-exon-sc0000102-1575043694:47570..47595 | Clytia hemisphaerica | exon |
| TCONS_00010062-exon-sc0000102-1491911889:47863..48627 | TCONS_00010062-exon-sc0000102-1491911889:47863..48627 | Clytia hemisphaerica | exon |
| TCONS_00010062-exon-sc0000102-1510915933:47863..48627 | TCONS_00010062-exon-sc0000102-1510915933:47863..48627 | Clytia hemisphaerica | exon |
| TCONS_00010062-exon-sc0000102-1575043694:47863..48627 | TCONS_00010062-exon-sc0000102-1575043694:47863..48627 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000102 | supercontig | sc0000102:47570..48627 + |
Blast
The following BLAST results are available for this feature:
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