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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00010120 ID=TCONS_00010120|Name=TCONS_00010120|organism=Clytia hemisphaerica|type=transcript|length=1369bp
ttttttttgaacttCACGCATAAAATCAGAAATCCTCCTTCCAATCCGAC
ATTTCGTCAAAAATACTAGACTAAtcaaaataattacaaaatatTCGAAA
AGTGACGAGAATAAATGGAAAGgaataacaaatattttttgagtaaCAAT
GTTAAAATTCTCTGAAAATTTAAtgatctgtttttttttaacattagatg
ACCGCGACATTGGCCTACCACCATTACGAGGACATTCTCTTTCATGGTCC
GCTGAAACTCAATCAGGAATCATAACAACTACAACCAATAATCGTCACCA
AAAATTGCGTCATGTTAAAACTAAACAAATATGGCATCCCGAGATACCAA
TACTTCAAAAACATAACTCGATGTAATATTTAGAGCGTCCATCGCAATCC
GTCGAATATCAGCAATTACGTGCAAAGCACCACATTAAATGTTCTGAACA
CTCTGGTGAGCAGCAATTAGACTCGCTAAACCAAGCTGGAATGAGGAATC
AAGTACTCTGGTGATAACAGCAATGTAGCCTCGCTAGTCCAAGCTGGAAT
AATGAATTCTTGGAGGGACTAGTTGTTGTGTCTAGTTGGATGATTTGGCA
CTCCTTGAGCTGAAAAATAAGCACCTCAAATGTAAGAAGGCAATCTTTAG
ACGATCTGTGGATCATCCCACTACGGATTTAAACAAAGGTATTAATTATA
TTACCTCATTAAAATTAACTATTAAAATACATCTGTCTCACTGAaagatt
tggccaaaatttcgtccccggtggagaAAATACTCTACTACAATTtcaat
tgactttgatttcatcctcattcgaaattctaaaatttgctgtccaaaac
catccccactggatattttaagctcgggaacaatagattttccatcccca
ttaggatttcgatagaaatttttatcacaactgtgggaaaaagttccacc
ggagcTGAGGGGtgtattaaattttgattttttaggtCTTGGTTGGTTAT
CGTTTTCCTAATTAATGATCAATTTCTTAGAATTTCTAATTAATTTTGAA
GCTATACCTAACGTAGTTATTCCAAGATTTCCAAAGACTAGAAGGgactt
ttcattttcgtttttgtttatgtttttttccaGACACACTGTATAGATCA
TCGTaaattatctttaaaattttgaaatttataaagcATAGaggttttat
ttttgaaaaaaaaagtgataGTATTATTTATGTAAACTTGTATAAAGTTT
TATTGTAtatatatatttcatatttattaaagaacaaaaagacaaaaatc
ttgtaaatgatttattcaattttgacatttcgaaataaacaaaattttca
aactgaaAATAGATTTTCC Run BLAST on NCBI transcript from alignment at sc0000102:78578..79946 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00010120 ID=TCONS_00010120|Name=TCONS_00010120|organism=Clytia hemisphaerica|type=transcript|length=1369bp|location=Sequence derived from alignment at sc0000102:78578..79946 (Clytia hemisphaerica)
GGAAAATCTATTttcagtttgaaaattttgtttatttcgaaatgtcaaaa
ttgaataaatcatttacaagatttttgtctttttgttctttaataaatat
gaaatatatataTACAATAAAACTTTATACAAGTTTACATAAATAATACt
atcactttttttttcaaaaataaaacctCTATgctttataaatttcaaaa
ttttaaagataatttACGATGATCTATACAGTGTGTCtggaaaaaaacat
aaacaaaaacgaaaatgaaaagtcCCTTCTAGTCTTTGGAAATCTTGGAA
TAACTACGTTAGGTATAGCTTCAAAATTAATTAGAAATTCTAAGAAATTG
ATCATTAATTAGGAAAACGATAACCAACCAAGacctaaaaaatcaaaatt
taatacaCCCCTCAgctccggtggaactttttcccacagttgtgataaaa
atttctatcgaaatcctaatggggatggaaaatctattgttcccgagctt
aaaatatccagtggggatggttttggacagcaaattttagaatttcgaat
gaggatgaaatcaaagtcaattgaAATTGTAGTAGAGTATTTtctccacc
ggggacgaaattttggccaaatcttTCAGTGAGACAGATGTATTTTAATA
GTTAATTTTAATGAGGTAATATAATTAATACCTTTGTTTAAATCCGTAGT
GGGATGATCCACAGATCGTCTAAAGATTGCCTTCTTACATTTGAGGTGCT
TATTTTTCAGCTCAAGGAGTGCCAAATCATCCAACTAGACACAACAACTA
GTCCCTCCAAGAATTCATTATTCCAGCTTGGACTAGCGAGGCTACATTGC
TGTTATCACCAGAGTACTTGATTCCTCATTCCAGCTTGGTTTAGCGAGTC
TAATTGCTGCTCACCAGAGTGTTCAGAACATTTAATGTGGTGCTTTGCAC
GTAATTGCTGATATTCGACGGATTGCGATGGACGCTCTAAATATTACATC
GAGTTATGTTTTTGAAGTATTGGTATCTCGGGATGCCATATTTGTTTAGT
TTTAACATGACGCAATTTTTGGTGACGATTATTGGTTGTAGTTGTTATGA
TTCCTGATTGAGTTTCAGCGGACCATGAAAGAGAATGTCCTCGTAATGGT
GGTAGGCCAATGTCGCGGTcatctaatgttaaaaaaaaacagatcaTTAA
ATTTTCAGAGAATTTTAACATTGttactcaaaaaatatttgttattcCTT
TCCATTTATTCTCGTCACTTTTCGAatattttgtaattattttgaTTAGT
CTAGTATTTTTGACGAAATGTCGGATTGGAAGGAGGATTTCTGATTTTAT
GCGTGaagttcaaaaaaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00010120-exon-sc0000102-1491911889:78578..79946 | TCONS_00010120-exon-sc0000102-1491911889:78578..79946 | Clytia hemisphaerica | exon |
| TCONS_00010120-exon-sc0000102-1510915933:78578..79946 | TCONS_00010120-exon-sc0000102-1510915933:78578..79946 | Clytia hemisphaerica | exon |
| TCONS_00010120-exon-sc0000102-1575043694:78578..79946 | TCONS_00010120-exon-sc0000102-1575043694:78578..79946 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000102 | supercontig | sc0000102:78578..79946 . |
Blast
The following BLAST results are available for this feature:
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