TCONS_00010135 (transcript) - C. hemisphaerica

Overview
NameTCONS_00010135
Unique NameTCONS_00010135
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length255

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00010135 ID=TCONS_00010135|Name=TCONS_00010135|organism=Clytia hemisphaerica|type=transcript|length=255bp
CTGCCTTTCATGGATATTTCTAGATCGATATCCTGTGACACCCTTTACCA
GATCTGTAATCCTCTCAAAAACTTTATCCCTTGCTAGTTTGATCAAGTTG
ACTAAGCAGACATCAACACGTTTATTGTACTTTCCCCTCAAGTATTTATA
CTTCAAGGTGCGATGAAAAGACTCTACAAACATGTTGGTATTAATGCAGT
TGCCAACACGATAACAATACCCCCATCTCCTTTTGGTAGGAACATATTCT
TAGAA
Run BLAST on NCBI

transcript from alignment at sc0000102:409616..409870

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00010135 ID=TCONS_00010135|Name=TCONS_00010135|organism=Clytia hemisphaerica|type=transcript|length=255bp|location=Sequence derived from alignment at sc0000102:409616..409870 (Clytia hemisphaerica)
TTCTAAGAATATGTTCCTACCAAAAGGAGATGGGGGTATTGTTATCGTGT
TGGCAACTGCATTAATACCAACATGTTTGTAGAGTCTTTTCATCGCACCT
TGAAGTATAAATACTTGAGGGGAAAGTACAATAAACGTGTTGATGTCTGC
TTAGTCAACTTGATCAAACTAGCAAGGGATAAAGTTTTTGAGAGGATTAC
AGATCTGGTAAAGGGTGTCACAGGATATCGATCTAGAAATATCCATGAAA
GGCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005689XLOC_005689Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00010135-exon-sc0000102-1491911889:409616..409870TCONS_00010135-exon-sc0000102-1491911889:409616..409870Clytia hemisphaericaexon
TCONS_00010135-exon-sc0000102-1510915933:409616..409870TCONS_00010135-exon-sc0000102-1510915933:409616..409870Clytia hemisphaericaexon
TCONS_00010135-exon-sc0000102-1575043694:409616..409870TCONS_00010135-exon-sc0000102-1575043694:409616..409870Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000102supercontigsc0000102:409616..409870 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.83534	4.14735	1.60516	3.14079	9.55903	8.30904	5.46791	8.53166	6.57054	5.91903	2.15443	4.7208	5.65709	7.34367	14.49	16.4139	13.8351	20.7254	9.04209	9.46189	16.4482	13.0371	5.68915	8.12785	0	0	6.80367	7.26106	2.36025	1.60315
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00010135 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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