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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00010150 ID=TCONS_00010150|Name=TCONS_00010150|organism=Clytia hemisphaerica|type=transcript|length=2610bp
GTTAAATTATTCTAAAAACTAAACAAACATCGTATCGCACAACAACAAGG
GGAAATTTCATTCACACAGGGGAATTCAGTTGCATCCACATCTTTACTTT
TTTTACACATTTAACCAGGGGAATCAAACACAAACATACTTCAGTGATTT
CGAACACGAAGAAATATTGCTGAACGAATAGACGGAATTTAAAGATTAAG
CAAGCTCGAATAgaagaaaaattgttttctcaATTAAAGAATCTACGGAT
GAAATAATCAGCGTTGGCAAAAAAACTGATTACACCGAGAATTGAGAGTA
AACAGAATTTGAAAGCAAAGAAATTCGCAATAGGATATCAAAGGCGTCGG
TCATCACATATAAGTTGACAGACTTAAAGAGTTTTTCACACCCATATATT
ACAATCAAGGTGAAGTAGCAAAGCAAAGAACGAAAGACTGAATGTTTTTA
AATATACTTAAATACCTTACTAAGAGCACGGCTAATCACTTGTGATATTT
CGAATAAGCTTTGACTTCGAATGACGTTTAATAGCATCTCGTGATAGATG
GTTGAGGTTAGTTGAAAAGTGATATTTTTGATACAACAAGCAGATTAAGA
GAAACACTTGTCATTTGGTGTGTTTGGTGGACTTAATTTGAATAACTCAT
CATCGTCAAACATTAACCACCACAGCTGTTGTGCAATTTGTTTGTTTGGG
AGACACACTTCGCTGGATTACAAGGAAAGGGACTAAACACTAATCACGTG
TTAATCAAAAGTCGAAGTTTTTGGTTTTGGGTGAAATTTTGGTTCTTTTG
AAAACTCGAAGAGTGTTTATTCTTCATCTTTCTTGGCAAGCGAGTGAGGA
AATTTTACCAACCTTCATCAGGTGGCAAGCAGAATCAAGCAATATTTGGG
AGCAAAAACGTTCATCCAgggataaaaaaacaaacagggaAAAGGACACA
CAGGAATATAATGGCAACCGAAGAATTATGTTTAATTTGCTGgGCGCGTG
GGCGTGGGGGAATGAACTTGGGACCGGGCGGAATTTCCGCAAACTTTAAC
ACTGACAACTCAACATATCAAATCAACGCAAACAATACACGTAATCACAA
CATGGGCGGGAATGGGCGTAAAGGCGCCATGAATATGAATGGAGGGCGCA
GAATGGGCGTTAATAGGATGACAGTAGCAAACAGCAAAACAGGACACAGC
GTACATATGAGagGGCTTCCGTTTGAATCGACAGctgctgacgtcatcag
gtTTTTCGCACCTTTACAGCCAGTAGATATTCGATTGTTGTACGAGTCAA
ACACAGGTCGGCCAAAGGGAGAGTGCGATGTCGATTTCACAACCCACCAT
GATGCAGAGGAGGCtatgaaaaaagataaacaaaatatGGGACACCGATA
CATTGAATTGTTCTTGAAATCCACAATCCATGGCAACGGGAAATGGAACA
ATAACAATAACATCATCGGAAAAAGTTCTCCTCCGTTGCTTCTCTCCCAT
AACAACAACAATCGCTCCTCCATCATTCAACAACCAAACCTAAATAACAT
CTACGCTGGAGGCTTCAACAtcacaaaacaacaacaaacaaccAATCAGA
ATCGATTTAACACTAATTCCTTACCTCCCATTGGTTGTAATTTCAATAAC
AACACTCCTTCGTCGTTGGGATTTGTTCGAAAACCTCCTCCTCCTCCCTC
CTCCGTGGATCCTTTTGGAGCGAACCGAGTGACACGTGAtgatttgaatt
tcaaagataCATCACGTGATCTAGACTTGTTGAGTCGGACGATCCATAAT
GGCAGCCAAACTATTCAAAATGGTTGCAAAAGTAATGGGGTTCAAAGTTT
TTATAGCAATGCGATTATATAATAGGGTGTGACTTgattttgaattcaat
tttttgattatGGTCAGAAGAATTTTGTGTATATTTTATTAAAGGTGTGA
ATTTTCtgtttgtttatttaattttttatgcatttgaaattattattttt
taaatgatgaaaaagaaTATTTGGGATTTTTTTATTAGGCTTTcatgatt
atttttttgtggttttttttGGAGAAATAATTTTGGGAGTGTATATAAag
tatattttaatttttattcagtttttgaattcttttgagGGATAAATAGG
AGATCAAACTAAAGAAGGACTTGTGAACAAAAGCCAGTAGGAgcaatttt
tgtttgaatacCTTTGTTCTTGGTAAGTGTTAGCTAAGCCTCGATTGCTA
ATCTTAATTTTGTTTGACttgcttaaaggttttgtttttatataagagtg
atatcgtttgcttactcgtcaattttaatttataagcttttttgcattga
atttacacggatgtggagcaagattggtcagaaagagggaaagaaaaaca
ttttttgcttatatcagcacaatataataATAGACAGTGTCTGCCTAATA
TGaaactgatatgaaacatgtgtctgatatgaaacggggacactaatgta
aaaataaaacctttaagagtTCTAGAAATGGCTTTAAGATGTTCTAGACA
ATAGTTTGGTCAAACTGAAAACGTTGAATgaaatttactttttatttttg
gatgAAGGAC Run BLAST on NCBI transcript from alignment at sc0000103:10560..23572+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00010150 ID=TCONS_00010150|Name=TCONS_00010150|organism=Clytia hemisphaerica|type=transcript|length=13013bp|location=Sequence derived from alignment at sc0000103:10560..23572+ (Clytia hemisphaerica)
GTTAAATTATTCTAAAAACTAAACAAACATCGTATCGCACAACAACAAGG
GGAAATTTCATTCACACAGGGGAATTCAGTTGCATCCACATCTTTACTTT
TTTTACACATTTAACCAGGGGAATCAAACACAAACATACTTCAGTGATTT
CGAACACGAAGAAATATTGCTGAACGAATAGACGGAATTTAAAGATTAAG
CAAGCTCGAATAgaagaaaaattgttttctcaATTAAAGAATCTACGGAT
GAAATAATCAGCGTTGGCAAAAAAACTGATTACACCGAGAATTGAGAGTA
AACAGAATTTGAAAGCAAAGAAATTCGCAATAGGATATCAAAGGCGTCGG
TCATCACATATAAGTTGACAGACTTAAAGAGTTTTTCACACCCATATATT
ACAATCAAGGTGAAGTAGCAAAGCAAAGAACGAAAGACTGAATGTTTTTA
AATATACTTAAATACCTTACTAAGAGCACGGCTAATCACTTGTGATATTT
CGAATAAGCTTTGACTTCGAATGACGTTTAATAGCATCTCGTGATAGATG
GTTGAGGTTAGTTGAAAAGTGATATTTTTGATACAACAAGCAGATTAAGA
GAAACACTTGTCATTTGGTGTGTTTGGTGGACTTAATTTGAATAACTCAT
CATCGTCAAACATTAACCACCACAGCTGTTGTGCAATTTGTTTGTTTGGG
AGACACACTTCGCTGGATTACAAGGAAAGGGACTAAACACTAATCACGTG
TTAATCAAAAGTCGAAGTTTTTGGTTTTGGGTGAAATTTTGGTTCTTTTG
AAAACTCGAAGAGTGTTTATTCTTCATCTTTCTTGGCAAGCGAGTGAGGA
AATTTTACCAACCTTCATCAGGTGGCAAGCAGAATCAAGCAATATTTGGG
AGCAAAAACGTTCATCCAgggataaaaaaacaaacagggaAAAGGACACA
CAGGAATATAATGGCAACCGAAGAATTATGTTTAATTTGCTGGTAAGATT
TTTATCGCTGTTTTCTtcagtttttccaaaaaatttcatttcattcttAG
TTTGTCGAAATCATATTCCCAGGGATTCATTCATTTTTTTGAGTTATCAA
ATACCTGATTCCAGGACACTTATCCTCAGACGTCTTATTCCATGACTACG
ATCCCGAAGGGGCTGGATCcgaaactcttggatgggaaatgaagccactt
atttcccatccacaACACGTGTCTCGTGTGTTTTTCAAACTAAAATTCTA
AATGGGTGGcaaacttaaggcttcacttttttcttgcttgagaaaggttg
aagattcctctctagccccttCCAGTCTTCAAACTCAATATCTTATTCTC
GTTTAGGCTGCTGGCACCCACTAACAGATTTGTAATCCTTATATACTTAT
ATACTGCCTGAAGTTTTGTAGAGGGCGGTGAAAATGGTCGATCTTCTGCC
AAATTTTAGTTCACAATTAGAAAAGGCAGGGCAGAAGAATGACTGTTTAG
ATTATAGAGTTTCACGTGCTTCCGAAAAGTTATGAGAAAGCTACAAACTT
GATTTATATGCGGAATATATTTGAATACTTCATTTGAATCTTCGATTTTT
AATGGCTAGACTGTCTAATTGACTTAATTAACCTTTATTTTCTTCCAATG
TTTCAGTAAGAAGCTTTATCATTTACCAAACAGTTAGGTCCCAAATTTAC
TTAGAAACTTAAAAGTCAGCGAAAAACCTTACCCATTAATGTAGGAGGAA
ATCTACAACAGCTTTTTTGACTGGAGAGGAAAGCTATGTATCTAATTAAT
GAAGAAAGCAACTAAAGACTTTTGAACTTCATTAAGAACTTGCGATTTGA
TAGCGCTAATTAATTAAGTAAGACACAAGGAACGCGATAGAGAGAGATGT
TATTGATTTTGAACTTGTTAAGCGGAAGCGCCGGACcacggtttttttta
taagaacatcctaaatttttgaagtctttgaATGTTCTGAACTTTTTGAT
CTTTAAGCCTCTAAAAAATGGTCTTTTTTTCAccatttaaagtatttttg
tccatttccctaagaaatttGGACAGATTCcgcaaagcctaaaaatgttc
ttaacgttgttctcaatattttgaccaagagaacattatgtttttatata
gtctgttcttattaaaaaaacctATATAATCTTACTTTTTCTCACGGAAT
TCACAATCATGTTCCAATAACCTGTCATCAAAAGTATCGCTCGTCGTAAT
GTGCCGGTATCGAGGATTTTGAGGTTTAGCGAGAGTTGTAAAAGATTAAG
TTAAGGAAGACTTAATTTTGTTGTGAGGTTGGGTCGAATGCATGTTATAA
TCATCAATACGTTAGTTAGTCGCTACAATTGCTGGTCTAAAGCTATCAGG
AATTGATTCGTTGCATATGGCTTGCAGTGAGCTTTGTTTGAGCTCTACTT
GGGAGCtatatttatcattttctgCTAGACATCAGCATAGAAAGGAACTT
ATACTTCTTGATACATGTTCCTACGTTTGCACATCATCTTTTTACTCcac
tgagctttatataaacTCCGAAAGCAGTTTCTCGATTGCAGCCgaccaaa
atctttgatcgaagttttctttttgaaagggTATCCTAATGCCATTCGAT
ATGGGTCAAATCATTTTCAAGGGAAATTGCAATGAACAATGAATTGACCT
ACATCGAGGAATGCTACCATTAGGGAATCACCGTTCTCAAAACTTCGATC
ACACATGGCGGATTGGCTTAGTCCAAGATCTTTATAGAGGCCAGTGATCA
CAACATTGTCCAAACGTTCATACAGTGTTGTTTGTATGTCCGTTATGGAT
GTTAGAAGGATcgtgttttgaaattttggtaataTTTTGTTGGATGCCAG
CTTGGAAGTCatcctcgtccccgtgtattccaggctttatttacgatACT
GATTGATAGACGCCAGAGAATaatatctagcgctatcagtaagcattaAA
AAAGCTGATGATACGAAGGGAGCGAGCTTGGAAGTTAGTTTGTTACAAGT
TGTCATATTGAGAATATAATGATAAAATGTGTAGACAATTAAACTGGTGC
TTCTTAGTTGACTAAAGAATATTGAATGATGAGTTTTGCTCACAAGCTAG
GAAAGTCTCGTGTTGTTGAAGCTTCAGTTAGAATTGACATGATTCGGTAG
ATATGTCTCGTTAGATCTAGTTAGATATTTTATGTAGATAGCCCAGTATT
CTAGGACTTTCAGACGCAGTCTTTCTATTGAATTTACGGGAACAAATGGT
CAGCCGATTCGGCTGAACTaggaactgaacggaacattgaaAGGAGCGGT
GATTCGAACAGCGAACTCCTGGTTTGAAGCACcggcgccttagaccactc
ggccattgctcCATAAATAGTTTAATCCGAAAGTGTACCAAGACTTCAAC
TACTTAATGAAGCTCGAATGTATATTCTCGAGTATAGGCGACAGACAAGA
CTCGTCTTGATTCTATCCGTCTGCGAAGTGGCAGTCTTTTCCTGATTAGA
CAGAATGATCGGTCAACTATCGATttaaaaagtcatttaatttaGTAACA
AGTTGTTCTTAATGTCAAAAGATCATAGGTTTAATCTTCTCATCAAAAAA
GTGCTCAGCAAAAACGAGTATCTTTCAACCAGAGGTCTCATCTCATCTTG
CCAAACTTTAGCTGTTTTAGCTCACCAACTTTCATGACAAAAACATCTTC
AGTTGTTTTGGTTGCTTTCCTATGTATTTCTTTTAAACTTATTTAAAACA
GCATCccttaaaatatttctttgagaACCCCAGAAATTCAGAGATCTTCT
TTACTGACtgagttaaaataaaatttctctGATTTTTGGAGATCAGTTTA
GTTCTTTAGCCGATAGGAATGATAAAGCAACCATAATAGAGTTGTCCGTA
TTACCAGTAATTCTCGTAATTCCCGCGGGAGGGGGGACTCGGGTGAAATT
GGGAACGGGaggtgccgctggtcagggtcccttttttaagcCTCTGAGGA
TATCTGGCAGGGtccaaaataattaattttcaagttttacatCCGTCTAC
ATTTCATTTCGTCATTTTTGTTATCAGTACCAATCGTTTCTGCGGTTAGA
AACGATCCCACAGGAGGAGGGAGAAAGCCTCTAAGCTTTATATAAGCCCT
GGAAACATTTTCTCAATTCCAGCCAATTAAAATCTTTGACCAAGGTGTAT
TTGAAAGTGTAACCCTAGCGGTGGCAAAACTCAATAGTGGTCTGAATGCA
TCAAAAatgcgctagatctactttcacTTGAATTTTTGTGTGTGCACATC
AGTGCGTTGTTTAGCGTCAGTTTTTAACACTACATTAGATTTTTAGCGGG
TACCACATTAATTAAAATCCGCTCAAAGCTGGTTTAGTCCAGGGTTTTTA
GAAATCAGTGGAGAGAGCACATCATACACTCTTTCGTAGATACAGGGGTG
GTAGAAACAAATTTGACAGCTTCCCCTGaacggcattttctcgagaaaGC
TGTTTGTGAATTTTGGAAggataagaaaaagaagttAGACCATGCAACAT
GACTTTGAAACATTAATTCCGATAAAAGGTGTCCGGAAAAGTCTTTCGCA
CAAgccttttatttcatttaaaatgtcCGAAATAATCTCcttgttcaatt
tttcacacacatgttgcaaaaaaaaatcacaaaaaataaaCGAGGCAAAT
ACGAGAGATAAAGATCAGCTTAAGGTGTAAAGATGACGTCGGGTTATCGA
GGTAAAGCCGGCTCAAAATTTGTAAGCAGTCGTAAATCAGTTGATATCTC
AGAGGCGCATTTTTTTAAGAtcattgtttcaaaaagtttaagtaAGCTTT
ATAAAGAtagctctctctctctctctcttgaCTGTTGCAGAACGAAATAG
ATGTGAGATTCTTTCAAAAGGTCACACATTTAGAAGAGCGGacaaaatat
gagaaaaatatGTCATGTTTTAAAGTTCACGTTTAAGTAGAAGGGTTTAT
GGCTTGAAAGTTtacaaacaatattttttgtgaGTTGACGATATGAAGGC
ATCAtcagacatttttttctttcttgttttttctttgtATCTCGCTGTAC
TTTAGTGCTGATGAAGGCAGTGAATGAAATGAATTGATAGACTGacaatg
atttggaaaaatttgtcCAAACTAATGGTTAATCACCTCTTGtagcctcg
ttttggagaaCCATCGTAGTCACGATTAACAATCCAATGAGAATTTCCGA
ATAATTCAAGAGACAAAAttaagaaatcttttttgtgcAGCCAGCTTGGT
TCGTCTCTAGAAATATTCGAAGTTTTCATTTGATTGTTGGACAAACTTTT
CGATTGTTGATCTACGGTATGGTGGAAGTTACCTCATCTAATATAAAGTC
TTTCGAGATTTAGATCAGATCTAAAACAGAGCAGCCAAGTATTTtgattt
caatatttcaaaaatgttaagTAAAGCCGTGTATTTGAAAGAATTTCAGT
TCGTAGCAAACTGGGGCAGGTACTGAGGAAAGTTATTAACATATCCAGGA
TCCTAAACGTAAATCAGTGTTCCGATCTGACAGTTGAAAACAGATGATGG
AAAAAACGCTAACAGTGCAGAGCAAACTTCCGGAAGAAAAAATGTGATGA
AATGCGAAGTAGATATTATAGAGCGTCCCAGGAGCATTACTATTAGGCAA
GATACTGTGAAGGTTTTATTACGCAGTACTAGCTACATTGCTATAATTTT
GAAGGCATCTAATTTTCGTCGATATGTTTTTATAAGAGTATCCGTTCTAA
TAGCTTTgttattcaaatattttgatcagattttcaagaaaatgattgga
ttttaagagttttgaggagatttttaaacattaagtTGCGTCACATCTAT
ATAATCAACATTTTACATgtcaaatttcctttctttttaagaCTCTGAAA
AAGTTATTACTTTAATTACTATTACTTTAAAGTGATTTAAAGTCTTAAAG
GCAATGCAGGTTAATTATTAGAAGTCAAGCAGGTTTTTTAAACTGAGCGT
TAAGAGTCAGAATTACTTTGGTGTGTTCGTTCAAACCAATCCCAgcgctg
gcacacaacgttgtttcaacgttcacgacgttgtgaacgttagataaacg
tcaaaAAACATTGTGTGTCAGCTGAGATGAAATTGATTTATGAGATGGGC
CCACTTTACGCTTCTTTCATGGGTTGGGAATCCGAGATAAGATACCTGAT
ATCAAATAATTTATAATatgaaattttcatcaaaaaaaaaaacaacagaa
aaatagaaatcaaatataaacaCATACCTTAGACAGAACACACCGACAAA
ACATCCGCACATATCCATGGCTGAAACATAAAATACATATTACACGATAT
ATTAGAACACACAAAATGTCTTTCGCTTCGTGCTACAATGACACCAAATC
GTTCTCAAGCTTGGACCTGCTTTATGCTGTTTACAGGTAAATAGAGCGGT
ACCAAGAATAACTAGCAGGTCAATGATTGCGGGATAACAGTTTGAAATAA
GCTCAATATCCCTTAACGAGAAACTAGCGAGTtcatctacacgttttttt
aaagaacaaactatataagaacataaggcttaaatggccaaaatgttaag
aacaagttaagaacattttaaggctttgtcgACTCAAAAACGCCCAATTT
CTTAGGACTATACtcaaaaaataacgaaaataagAACCCAAAAATGACGA
aaacaagaacatgttaagaacactttaaggctaaaagctcaaaaagttaa
gaacatctgaaggcttcaaataatttggatgttcttataaaaaacgtgta
tcacgTATAGGGGAGAGATAGATAGCTTTTCATTCGCTTATAtcctaaaa
aaaatttccacccaggacattcttattccaaccccccccccccccccNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNccccccccgcttat
tccaaaccccacggctattaggtacccgagagtacataAACTCGCTGCTC
TATCGGGGGAGTATAGAAATTGttaatttttgttaatttattcatatttt
cttttcattttaggGCGCGTGGGCGTGGGGGAATGAACTTGGGACCGGGC
GGAATTTCCGCAAACTTTAACACTGACAACTCAACATATCAAATCAACGC
AAACAATACACGTAATCACAACATGGGCGGGAATGGGCGTAAAGGCGCCA
TGAATATGAATGGAGGGCGCAGAATGGGCGTTAATAGGATGACAGTAGCA
AACAGCAAAACAGGACACAGCGTACATATGAGaggtaaaaaagtgaaaaa
tctgTCTCTGCTTGTCTCTGACtgtctcgttttgaaaccattaccaaggt
gataaagcccttgagacttcaaatgttactttaataAATTGGAGCAaact
tcttatgaactcctctcggaatcaattaccatagcaatattttggtAAGG
TAAGCGTTTCCCATGActtaatttatcaaaaagtctatCAATTTTTTACC
AAGAACCTGTTTaacaatttttgctcaaaagcATGTGCCAAGACCATATG
ATAAATTTAGCTTGCCTAAGTATAACTTACATTTATTTTTATTCCGTAGG
GCTTCCGTTTGAATCGACAGctgctgacgtcatcaggtTTTTCGCACCTT
TACAGCCAGTAGATATTCGATTGTTGTACGAGTCAAACACAGGTACTGGa
ttgttttttcaaattcaacaaatggCTTGCTTTAGATCTGGTAAAAAGAA
TgtaaaatttgaccaacttttgattttgacataAATGGAAGAAATAGGAA
CAAGGGGagaaaatgggtgccgggtatctGTGAACCTTACCAGGTCTGTC
CAAGGGTTCAAAAAACACATCAAGTTGGTCTTTCTGGGGTCTTGTCAGGC
TGGCAGCATCCTtctggtttgttttgaaaaccattTAAGGGATGTGTACA
GCTTAAGGTCTAGCCCGCACATAACCAACATTTTCCACCTCATGAAAATA
TAGTAATAATAGTCAAAGGTGGTTTCCAATAGGGATAATAGTTTTGTGAA
CAAGTTTGTGCATCAAGTGGCATATCATTGTGAGATCAAAGAATTCATCT
TATCatacaaagtaaaaaaataagcaaaaaatatggAATGGACGAATTAT
ACAAACTGATaccgtaacaattatcgtattatcatttAACATCCACATGA
CTGtgttgggctattccagaaatagccTGTACctcagggtggtctggaaa
ataaaaaatccaggatggtcagtataacgaggtcgaaaatccagggtggt
ccgaagaaatgggagaaaaaaatccaaggggtcctgaaaatttgggaaaa
aatccagggggggtcaacaaatttttttctggaatagcccattataAGGT
TTacaaacgactccagtctacttaAGCTTGAATATATAATACCTTTTTGA
AATTCTCGTCCATTTTTGTGATGTTTAGGTCGGCCAAAGGGAGAGTGCGA
TGTCGATTTCACAACCCACCATGATGCAGAGGAGGCtatgaaaaaagata
aacaaaatatGGGTAAGTGTGTAATTTACTGACCAGAATGGAAGGCGAAA
TTAAGAGACCAGAAATCAGCTATCATGATGATCTGACACTGGAAGCTAGC
TAATGATCCTTATTAAAAGAATGTACacactttttttgtaagaatggtgt
aaatccattgcatcatggatattcttaactttttagtcAAAGTCATTATA
TAATATTGTTAACATAAATGGCAatattcttacgatgttcttaatttttt
ggctattttcatcatggacattcttataaagtgtatttttataaaaaagc
ataGTACAATAGTACAATACCGTAaattcaatagacgatatcggctttcc
gaattctccccgaatgattacccatgatgcattgcgcaaaaaaattcacg
gacgatattgacttgatgaatttttttgcgcaatgcatcatgggtaatca
ttcggggagaattcggaaagccgatatcgtctattggagACAAATTATTA
AAAGCACCGTTTACAACTTCTGGAATTcttgattgaaattttcatttttg
ctgcttatgaaaaccaaactaaaggccggtctccactttcgcgcgacata
aTCGAAAACTCTTTGGCGTtgttgtaaggtcattggtcggttgaaaaatg
aagcaattccattggtcgaaattgacgtaacggatgaaaaaagtagaact
tcattcaacttttcttttgttcgcgcgaaacttttttatgacgtaatctt
tcaggcaaaaaagattaagaaaaaaactgtcgcccatttcgcgcgaaagt
ggagaccggccttaacgcATCTCTTGATACAGTTTCCACAACGTTAAATT
AATAAGCAGTcttaaattatgaaaaacaatgTCGAAATCCTTCTGAGGTT
ATATTAACACCTGCCAGTAGAGAGTTCATgcatttgcacttttgaggacg
gctgagtgactgaagcgatttggaaaatcCGCATTTTTCACCCACAAAAT
CGaagacggtaaaagtgcttgtttaccgtcgtcctcagtcagacGGGATG
TAGATAAATTAGAAGCTTACCACAGGTATATAAACTCGCTTTtgttcgaa
gtaatacggtaatatAGTTCTCATTAATGACTTCTTCGCTTCTTTGTTGG
CATTTATTTACTTAAGAGCTCTTAGTAATTCATGAGATATACCCCTTTCC
AAAACTCGGGATAATATGAAAGGGCTAAATGGGCTAAATCTCTTATTTGA
AATGGGTGGAAATAATTCGAATTCTCTGTTTAGCGAGTTTATGCATTTGC
AATTTTGAGGACGGCGGAGTGACTGAAGTGATTTGGAAAATCTAACTGTT
CTGACCCGcgaaatcgaggacggtaaaagtgctgatttaccgtcgtcatC
AGGTGATCAGGATCTAAACAAATCAGAAGTTAACTATCTCCACCGTAGAA
AAGCAAAGATATAAACCTAGCTAATTTGTAGCGACACGACTGAAATCGTA
gactatttttcttttgatttctttcctCCAGGACACCGATACATTGAATT
GTTCTTGAAATCCACAATCCATGGCAACGGGAAATGGAACAATAACAATA
ACATCATCGGAAAAAGTAAGTAGTATTccacttgaaaatttctttccaaC
TTATTTTCATTGAATGAACACGTGGAGAAAATCAGTACACGAGGCCATTT
TCGAGTAAATTTCGGTCTATTCAGATTCCAAAGGCTCCCCGTTTTTTACT
CACGATAATAAAAGTAAGAATTAGGTAACTTTCGCACATTATATTACGAC
TGCTTGCGGAACGTGAATGCCTTGAAAATAATGCACCCCTTTTGAAACAA
AAACTTGAAGGAAAGCAATCCAAGCTTTTGATATTCAAACAGGACAGGAC
AAGAATGGGCTTAAAGTGTAGAATGATCTTTAGAGGGGAATTTTTACAAG
AGATGTAACATAACATGGCTCAGTTCATTCAAAAAAGGACAGTTAGCTAA
GTTCGGActcttttatcattttcagaTTAAAAATTCTTTAGGTTCTCCTC
CGTTGCTTCTCTCCCATAACAACAACAATCGCTCCTCCATCATTCAACAA
CCAAACCTAAATAACATCTACGCTGGAGGCTTCAACAtcacaaaacaaca
acaaacaaccAATCAGAATCGATTTAACACTAATTCCTTACCTCCCATTG
GTTGTAATTTCAATAACAACACTCCTTCGTCGTTGGGATTTGTTCGAAAA
CCTCCTCCTCCTCCCTCCTCCGTGGATCCTTTTGGAGCGAACCGAGTGAC
ACGTGAtgatttgaatttcaaagataCATCACGTGATCTAGACTTGTTGA
GTCAGACGATCCATAATGGCAGCCAAACTATTCAAAATGGTTGCAAAAGT
AATGGGGTTCAAAGTTTTTATAGCAATGCGATTATATAATAGGGTGTGAC
TTgattttgaattcaattttttggtTATGGTCAGAAGAATTTTGTGTATA
TTTTATTAAAGGTGTGAATTTTCtgtttgtttatttaattttttatgcat
ttgaaattattattttttaaatgatgaaaaagaaTATTTGGGATTTTTTT
ATTNTTCTTTCCTCCAGGACACCGATACATTGAATTGTTCTTGAAATCCA
CAATCCATGGCAACGGGAAATGGAACAATAACAATAACATCATCGGAAAA
AGTAAGTAGTATTccacttgaaaatttctttccaaCTTATTTTCATTGAA
TGAACACGTGGAGAAAATCAGTACACGAGGCCATTTTCGAGTAAATTTCG
GTCTATTCAGATTCCAAAGGCTCCCCGTTTTTTACTCACGATAATAAAAG
TAAGAATTAGGTAACTTTCGCACATTATATTACGACTGCTTGCGGAACGT
GAATGCCTTGAAAATAATGCACCCCTTTTGAAACAAAAACTTGAAGGAAA
GCAATCCAAGCTTTTGATATTCAAACAGGACAGGACAAGAATGGGCTTAA
AGTGTAGAATGATCTTTAGAGGGGAATTTTTACAAGAGATGTAACATAAC
ATGGCTCAGTTCATTCAAAAAAGGACAGTTAGCTAAGTTCGGActctttt
atcattttcagaTTAAAAATTCTTTAGGTTCTCCTCCGTTGCTTCTCTCC
CATAACAACAACAATCGCTCCTCCATCATTCAACAACCAAACCTAAATAA
CATCTACGCTGGAGGCTTCAACAtcacaaaacaacaacaaacaaccAATC
AGAATCGATTTAACACTAATTCCTTACCTCCCATTGGTTGTAATTTCAAT
AACAACACTCCTTCGTCGTTGGGATTTGTTCGAAAACCTCCTCCTCCTCC
CTCCTCCGTGGATCCTTTTGGAGCGAACCGAGTGACACGTGAtgatttga
atttcaaagataCATCACGTGATCTAGACTTGTTGAGTCGGACGATCCAT
AATGGCAGCCAAACTATTCAAAATGGTTGCAAAAGTAATGGGGTTCAAAG
TTTTTATAGCAATGCGATTATATAATAGGGTGTGACTTgattttgaattc
aattttttgattatGGTCAGAAGAATTTTGTGTATATTTTATTAAAGGTG
TGAATTTTCtgtttgtttatttaattttttatgcatttgaaattattatt
ttttaaatgatgaaaaagaaTATTTGGGATTTTTTTATTAGGCTTTcatg
attatttttttgtggttttttttGGAGAAATAATTTTGGGAGTGTATATA
AagtatattttaatttttattcagtttttgaattcttttgagGGATAAAT
AGGAGATCAAACTAAAGAAGGACTTGTGAACAAAAGCCAGTAGGAgcaat
ttttgtttgaatacCTTTGTTCTTGGTAAGTGTTAGCTAAGCCTCGATTG
CTAATCTTAATTTTGTTTGACttgcttaaaggttttgtttttatataaga
gtgatatcgtttgcttactcgtcaattttaatttataagcttttttgcat
tgaatttacacggatgtggagcaagattggtcagaaagagggaaagaaaa
acattttttgcttatatcagcacaatataataATAGACAGTGTCTGCCTA
ATATGaaactgatatgaaacatgtgtctgatatgaaacggggacactaat
gtaaaaataaaacctttaagagtTCTAGAAATGGCTTTAAGATGTTCTAG
ACAATAGTTTGGTCAAACTGAAAACGTTGAATgaaatttactttttattt
ttggatgAAGGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00010150-exon-sc0000103-1491911889:10560..11551 | TCONS_00010150-exon-sc0000103-1491911889:10560..11551 | Clytia hemisphaerica | exon |
| TCONS_00010150-exon-sc0000103-1510915933:10560..11551 | TCONS_00010150-exon-sc0000103-1510915933:10560..11551 | Clytia hemisphaerica | exon |
| TCONS_00010150-exon-sc0000103-1575043694:10560..11551 | TCONS_00010150-exon-sc0000103-1575043694:10560..11551 | Clytia hemisphaerica | exon |
| TCONS_00010150-exon-sc0000103-1491911889:17823..18043 | TCONS_00010150-exon-sc0000103-1491911889:17823..18043 | Clytia hemisphaerica | exon |
| TCONS_00010150-exon-sc0000103-1510915933:17823..18043 | TCONS_00010150-exon-sc0000103-1510915933:17823..18043 | Clytia hemisphaerica | exon |
| TCONS_00010150-exon-sc0000103-1575043694:17823..18043 | TCONS_00010150-exon-sc0000103-1575043694:17823..18043 | Clytia hemisphaerica | exon |
| TCONS_00010150-exon-sc0000103-1491911889:18359..18451 | TCONS_00010150-exon-sc0000103-1491911889:18359..18451 | Clytia hemisphaerica | exon |
| TCONS_00010150-exon-sc0000103-1510915933:18359..18451 | TCONS_00010150-exon-sc0000103-1510915933:18359..18451 | Clytia hemisphaerica | exon |
| TCONS_00010150-exon-sc0000103-1575043694:18359..18451 | TCONS_00010150-exon-sc0000103-1575043694:18359..18451 | Clytia hemisphaerica | exon |
| TCONS_00010150-exon-sc0000103-1491911889:19238..19321 | TCONS_00010150-exon-sc0000103-1491911889:19238..19321 | Clytia hemisphaerica | exon |
| TCONS_00010150-exon-sc0000103-1510915933:19238..19321 | TCONS_00010150-exon-sc0000103-1510915933:19238..19321 | Clytia hemisphaerica | exon |
| TCONS_00010150-exon-sc0000103-1575043694:19238..19321 | TCONS_00010150-exon-sc0000103-1575043694:19238..19321 | Clytia hemisphaerica | exon |
| TCONS_00010150-exon-sc0000103-1491911889:21927..22010 | TCONS_00010150-exon-sc0000103-1491911889:21927..22010 | Clytia hemisphaerica | exon |
| TCONS_00010150-exon-sc0000103-1510915933:21927..22010 | TCONS_00010150-exon-sc0000103-1510915933:21927..22010 | Clytia hemisphaerica | exon |
| TCONS_00010150-exon-sc0000103-1575043694:21927..22010 | TCONS_00010150-exon-sc0000103-1575043694:21927..22010 | Clytia hemisphaerica | exon |
| TCONS_00010150-exon-sc0000103-1491911889:22437..23572 | TCONS_00010150-exon-sc0000103-1491911889:22437..23572 | Clytia hemisphaerica | exon |
| TCONS_00010150-exon-sc0000103-1510915933:22437..23572 | TCONS_00010150-exon-sc0000103-1510915933:22437..23572 | Clytia hemisphaerica | exon |
| TCONS_00010150-exon-sc0000103-1575043694:22437..23572 | TCONS_00010150-exon-sc0000103-1575043694:22437..23572 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000103 | supercontig | sc0000103:10560..23572 + |
Blast
BLAST of TCONS_00010150 vs. Swiss-Prot (Human)
Match: HNRH1 (Heterogeneous nuclear ribonucleoprotein H OS=Homo sapiens GN=HNRNPH1 PE=1 SV=4) HSP 1 Score: 96.2857 bits (238), Expect = 9.702e-21 Identity = 46/82 (56.10%), Postives = 55/82 (67.07%), Query Frame = 1
Query: 1180 NSKTGHSVHMRGLPFESTAADVIRFFAPLQPVDIRLLYESNTGRPKGECDVDFTTHHDAEEAMKKDKQNMGHRYIELFLKST 1425
S TGH VHMRGLP+ +T D+ FF+PL PV + + + GR GE DV+F TH DA AM KDK NM HRY+ELFL ST
Sbjct: 284 QSTTGHCVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPD-GRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELFLNST 364
The following BLAST results are available for this feature:
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