TCONS_00010171 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00010171
Unique Name	TCONS_00010171
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1620

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0000103:256925..263986+
coding sequence from alignment at sc0000103:256925..263986+

transcript sequence

>TCONS_00010171 ID=TCONS_00010171|Name=TCONS_00010171|organism=Clytia hemisphaerica|type=transcript|length=1620bp
ACCTGAACTTTTCCACTTGCTTCATGGGCTCAATAATGAATTGATTGTGG
ATACAAACGaaaaggttgaaaaattcgACTCAAGATATTTGACTATGGTG
GAAGTTGAACATTCAAACTTTACAATGGACCTTATCAGTGGGAGTAAAAT
TAACACCCTACCTAAAACCATTCAAAATCAACAATGTCCTCTTTGTCGAA
AATCCTTTGCTTCTTCAGAAATTGAGAATCATGCATCAACCTGTGGAGAA
AAGAATCACATGGGTGGATTCAAAACATCAGAGAAAAAAGCTCTTTCCTT
ATCGTCTGGTATCTCGACCAAAGCCAGACAAGTTCATTCCAGAAGAGAAG
TACGCTGTCCTGTATGTAAAAAGTTTTTCGCGAGTTCAGATGTTGAGGAG
CATGCCATTCAGTGTGCTGATGAAAAATTTGCAAACACTGTTGTATGTGA
TGATGATGAGAGTACTTCTTGTTCAGATGGTGAAGACATTGGAATGGAGG
ACACTGAAGTAGCAATAACCATTAAAGATGTAATTTCTTCGTTGGCTATT
GATTTTAAAAGTGAAACATCAATTAGAATCAGACGAGGAAACTGTTTCAA
TGATTTCGTCGAAAAAAGGAGCTCACCGTTCATGAAGAGACAAAGCAAAA
ACAATGCATTAAGAATAATTTTTTACGGTGAACACGGCGTGGATCAAGGT
GGTGTACGAAGAGATTTCTTTACAGAAGCCATTCAAGAGATCAAAGACCA
ATTGTTTGTTAGCAAGGAAGATGGTATGCTGCCGAGTTGTACGATGACTT
AGCAAATGGCCTTTTCAGAAATGCGGGAAAGCTCTTTGCATATTCGATCT
GTGAAAATGGACCTGCGCCAAATTTTCTATCTCCTTGGGTCTATGATTAC
ATAGCTGGTGGTGTGGGTATGGTTCTCAACAGATTGCCAGAGAAAATAGA
AGATAAAACATACCAAAAGATCTATAAAATTCGAACAGAAGAAGAGCTGA
AGGATTTTTGTACATCAGATGAAGGCACCGATGTTCTATCAGAAATAAAA
TATCGAAGTGTACCAAGTTCAATAAAACTAAAATCAGAAGAATTTATTTT
AAGATCTCTATTTGCAAAATGGTTAAATCCCTACGTTCCTTTCATTCAAG
AAATTGCAATTGGTTTGGAGCAATATGGTTTTCTACAAAAGATAAAGGAA
CATCCTCAAAGCCTGAAAACCTTATTTTGTTTACATACTGATTTTGATTG
GACATTTGATGAGGTTTTTGAACTCCTGGAGCCCGATTTCAGCCCGGAAA
ACAATACTTACAGATATAAAGAAATCAACACTTTCAAAGCTTTGTCAGAC
GCTTTGTCAgattgttatgatttgaaaggtgaagaaaacgCTCTTACACT
TTCAGAAGTAATGAAGTTCATCACCGGTTGTTCTTCAAAACCAGCGTCTG
GGTTACCAGGGAAAATCACTGTGATATTTGAGAAATATTGTCCCGAAAAT
TGCAGATGTAAACCCACAACTTCTAGCTGCGATATTCAAATCGAAGTTGC
TTTGCGCTACACTACCAAACGTGACATGATGATAGCTTTAACAGATGCAT
GCCGCGAGAGTAAAGGAATG

Run BLAST on NCBI

protein sequence of TCONS_00010171-protein

>TCONS_00010171-protein ID=TCONS_00010171-protein|Name=TCONS_00010171-protein|organism=Clytia hemisphaerica|type=polypeptide|length=266bp
PELFHLLHGLNNELIVDTNEKVEKFDSRYLTMVEVEHSNFTMDLISGSKI
NTLPKTIQNQQCPLCRKSFASSEIENHASTCGEKNHMGGFKTSEKKALSL
SSGISTKARQVHSRREVRCPVCKKFFASSDVEEHAIQCADEKFANTVVCD
DDESTSCSDGEDIGMEDTEVAITIKDVISSLAIDFKSETSIRIRRGNCFN
DFVEKRSSPFMKRQSKNNALRIIFYGEHGVDQGGVRRDFFTEAIQEIKDQ
LFVSKEDGMLPSCTMT

Run BLAST on NCBI

transcript from alignment at sc0000103:256925..263986+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00010171 ID=TCONS_00010171|Name=TCONS_00010171|organism=Clytia hemisphaerica|type=transcript|length=7062bp|location=Sequence derived from alignment at sc0000103:256925..263986+ (Clytia hemisphaerica)
ACCTGAACTTTTCCACTTGCTTCATGGGCTCAATAATGAATTGATTGTGG
ATACAAACGaaaaggttgaaaaattcgACTCAAGATATTTGACTATGGTG
GAAGTTGAACATTCAAACTTTACAATGGACCTTATCAGTGGGAGTAAAAT
TAACACCCTACCTAAAACCATTCAAAATCAACAATGTCCTCTTTGTCGAA
AATCCTTTGCTTCTTCAGAAATTGAGAATCATGCATCAACCTGTGGAGAA
AAGAATCACATGGGTGGATTCAAAACATCAGAGAAAAAAGCTCTTTCCTT
ATCGTCTGGTATCTCGACCAAAGCCAGACAAGTTCATTCCAGAAGAGAAG
TACGCTGTCCTGTATGTAAAAAGTTTTTCGCGAGTTCAGATGTTGAGGAG
CATGCCATTCAGTGTGCTGATGAAAAATTTGCAAACACTGTTGTATGTGA
TGATGATGAGAGTACTTCTTGTTCAGATGGTGAAGACATTGGAATGGAGG
ACACTGAAGTAGCAATAACCATTAAAGATGTAATTTCTTCGTTGGCTATT
GATTTTAAAAGTGAAACATCAATTAGAATCAGACGAGGAAACTGTTTCAA
TGATTTCGTCGAAAAAAGGAGCTCACCGTTCATGAAGAGACAAAGCAAAA
ACAATGCATTAAGAATAATTTTTTACGGTGAACACGGCGTGGATCAAGGT
GGTGTACGAAGAGATTTCTCTACAGGTAAGGAAACGATTTCNCGTGGATC
AAGGTGGTGTACGAAGAGATTTCTTTACAGGTAAGGAAACGATTTTAAtt
gtaattttaaaaattatcatcagaaatttttacttcactTACCTTTTGAT
TctgaattttaaaatcagattGTTGCAATGTGAGCCTTACACCATTTTGA
GAGAGAAAGTTGTAATTAGAAAGTTATAAAGCCAGAAGCCAAAGACTGGA
TTTTAAGCTTCTATTATACTCGGGAAGGGGTAAGTAAGTCAATAAAGAAT
CAAATCGAAAATTAATCGAATCAAttacttatttttcattttttgcaata
acgtTTTTTTAAGTGGTAGGTGTTACTTTTAATTTAACGTTGAATGAAAA
ATACGCACAATCTTGGTACCTTAATTCCCTTAATCTTCGCGCACTATGCC
ACGCGAACATTTAACTGATGCGCTAATTAGTGACCACTATTTTTGGCTAT
TTTGGCCTTTACATGAGCTTTGATGTAGTTCTAGCGATATTCATCAATCA
TTTTTGTACTCTTCGTTGGATTTGTTATGGTTAACCAtaacaaaaccata
aaaaaaaACCGTAATtgtgaaatttaatgttgatatttttcttccATCGG
CTTTATGTTTTTTGATGCTCCAAATTCATGGGTTTCCGTCTCAAGAAATT
GACCCTTTTGATGCAAAAGCATAGTTTTTCGTTCAGAAGAGAAAATGTAC
TTGTTACACTGAAGTAACTTATATAAAACATGACACAGTAAAGCTTATGT
CAGCAAATCTTAAAAACACTGAATGATATACATATACATACATGATGTAC
ATAGGTTAGTTTGcgcaaaatatataaataacagATTTTAAAGACGGACC
CAATTTTACCCTTAGTCCTCGTCTGTTATATTTCAGAAGCCATTCAAGAG
ATCAAAGACCAATTGTTTGTTAGCAAGGAAGATGGTATGCTGCCGAGTTG
TACGATGACTTAGCAAATGGCCTTTTCAGAAATGCGGGAAAGCTCTTTGC
ATATTCGATCTGTGAAAATGGACCTGCGCCAAATTTTCTATCTCCTTGGG
TCTATGATTACATAGCTGGTGGTGTGGGTATGGTTCTCAACAGATTGCCA
GAGAAAATAGAAGATAAAACATACCAAAAGGTTAGAACTGTTCAATATTG
TGTATATGTATCTTCATTGTTAACTCTACTGCTAACAATGCTAACAAAAG
TTCCTACGACGTTTATTTTAGAGGTTAAAGTATAATTATTTCGATAAAGA
CAAGTTATTACAAGATGAATGTTATAAAAGACAGAGCACTGTACTGGTCA
GTAAAATTAATATCGTGCAAATATCTTTGTTATTATTANAGGAAGATGGT
ATGCTGCCGAATATTGAGCTGTACGATGACTTAGCAAATGGCCTTTTCAG
AAATGCGGGAAAGCTCTTTGCATATTCGATCTGTGAAAATGGACCTGCGC
CAAATTTTCTATCTCCTTGGGTCTATGATTACATAGCTGGTGGTTTGGGT
ATGGTTCTCAACAGATTGCCAGAGAAAATAGAAGATAAAACATACCAAAA
GGTTAGAACTGTTCAATATTGTGTATATGTATCTTCATTGTTAACTCTAA
TGCTAACAATGCTAACAAAAGTTCCTACGACGTTTATTTTAGAGGTTAAA
GTATAATTATTTCGATAAAGACAAGTTATTACAAGatgaatgttaaaaaa
gacAGAGCACTGTACTGCTCAGTAAAATTAATATCGTGCAAATATCTTTG
TTATTATTCACATTGCGCTGGAGCTCTTATTTGAAGGCTAAAGCACTtga
tattttatcattttaaatctctttgatctTTTGTAATTTAAACTATACTT
GTTTACTTGAAATCATGTTTACTTGCTCCCAAAAACTgattaatttcaat
attttaaaggGTATGCTCGTGTTATGCATAAAAACGAATTTTGAATGAAC
GCCTCTGCTAGAGCTCTTTCCATACACCATCGTGCATCATACATGATAAA
TTGAACTACTTTTCAAATCTATACCCCCTGGTACAAGTAGAAAACCACCA
TGCAAAAATATTCACTTATTTCATTCTCGTCCCTGAATTACATGTGAATT
AATTACAGGTGTCCAATAATCAACCAAAAATTAGGGCCCCAATTTGGGCT
CCCTACCTTTTTGACCAAATCGTTTTAAAAAGggcaaattttaaaagttt
gaaaccTTAAAACGATCAATATcagatagagcatgaaatttatcaaatat
cAGAGTTTGGTAGGAAATTATTGTCCCATTTCCATTTATGTTTTTTGTTT
CTCCCTCTAGAAGACCTAGAAGTTATTAGAAAATATTCACTAGGTATTTA
TTAactaaaaattcttattttttcttactCAGATCTATAAAATTCGAACA
GAAGAAGAGCTGAAGGATTTTTGTACATCAGATGAAGGCACCGATGTTCT
ATCAGAAATAAAATATCGAAGTGTACCAAGTTCAATAAAACTAAAATCAG
AAGAATTTATTTTAAGGTAAGCAAAATCTAGATTTAAAGTGCAATTCCCT
TATAATCTGTTTTCCAcaaatttaagaatattcttTTTGATatctagatt
tttattttttgaataaattttcttgTAGCTTCTTGTTACTTCACGATTCT
TAAGTTTCAGGGAAATTAGGATCAAACAGGGAACTTGAAGCAAATATGTT
AAGTAGAGTTTTAGTTTTGAATTCTTTAGCCTTCTAGTGTAGAACAAGCT
AGTTTGCGTCTTAATAAGAgacatttatataaaaaattaggCAAAATCAG
GTGGGCTGAGGCAGAGTTTGCTTATTTTGGATATTTATCCCGCTATATGC
AAATAAGGAAcatgtcaagaatttttcatgAGCTATCGCCCCCTAAAATT
TGAGATAATTTGCCCGAAAAATGCACTTCAGGTAACTCGAGACCAATAta
gaagaaattgaaattctGTTTAAAAGTTTATACATCTAAttatatatcaa
aatcaaattccaCAAAAACGTTTCCTCATGAAAAACTATAAAGTTCCACG
CAACTGAACTCTTTGAATCCTTTTATCAGCTGACAAAATGTTTATCTATA
GCTTTCATGTCAAATTAGTAAGTTTGTTATTGTTCGCTAGACAAGGCAAG
GACCCCTTTGGATTTATCATTTCCTCTTTTTACTTTAGATCTCTATTTGC
AAAATGGTTAAATCCCTACGTTCCTTTCATTCAAGAAATTGCAATTGGTT
TGGAGCAATATGGTTTTCTACAAAAGATAAAGGAACATCCTCAAAGCCTG
AAAACCTTATTTTGTTTACATACTGATTTTGATTGGACATTTGATGAGGT
TTTTGAACTCCTGGAGCCCGATTTCAGCCCGGAAAACAATACTTACAGAT
ATAAAGAAATCAACACTTTCAAAGCTTTGTCAGACGCTTTGTCAgattgt
tatgatttgaaagGTAATTTTTAATTTCGGTTTGTGCAGAAAAAGAGGGC
AAAAAGCCGACTTTAAGGACTTTAAGGTTTTTAATGGTTTCAGAAAAGAT
ATCTATACCTCAATGGGCttaaaaattaggaaaaaatggCTCAGTTAGCc
gaaagtatttcaaaatgctACCTGTTGGCATTTCTTTTGGTGTAATTAGC
TGTCAATTAAATGctattaactctttttgtaaaaaagttaaacctacagc
acctgaccccgagaatgtaggtgaaatttgaatcagacctgagagatgta
gatttgcatttaaaaaaatattttttatttatNcagcgggtctgggacac
gtcgtaaaagcttaaaatgccaacattaattatctctcaggtaatacttt
catgttatgaaagtacaacaaaaaaagtttatataatttgacagactttt
taagTCGGGTTACGNtgaactcccaaaatcctttcccaggggttagtttc
attacttttgatagataggctaatttttttggtccttgaagttgactccc
attttcattataacccccagaattttatggctttaaatctagtaatagta
aaatgttgatattttttcgattgaattaattataacaggaaattttagaa
atatttgatgccaaaacaatattctaaagagcttttgttattctgaaaat
tgcattttttcgctttttaacccccataatgtaggtgaaaagattcgatt
gctgagagcgaaatttcagtattcatcggaaatttttgttctctaagtga
aattcatactttagaaatatactctgacaNtaccctatcatcataactta
attccaatagatttcgatttagagaggatttatttaaaaaatgtctcaat
tcgagtagtatccaatcaactttgattcagattttcgcctgaaaaaatca
attcaagttaaaattttatgtctagaaataatcagtaatatgtaatagta
tgctctgaaacaactttttatgaagttgaactatcgttagggctaccatg
ctaaaaaatgagaaacctacattctcgggttttactacattctcggggtc
aggtgctgtatatACCATCTTAAAGAAGTTAATTAAACTACCAAAAAACA
TAATTATGGCCAATTGGATTTTATTCATTGTTTTCAGAACCCTTTTTTGA
CTTTGAAGccgattttctcaaaaagtaATCCTTTTAAAGACAAAGTGAGA
CATGTTTTTCGGCTCAGCCTTTCTTCTTTACAATGATGTAATTCTCAAAT
TCACCAATCAAAACGTGTACGTACGTTAACTCTCTGAAAATAGTTGgtat
tgaattttttagaaaaaaattatgatccTAATTGTACTAAACTCTTATCC
AATTTGCcattgaaagatttttgttaTACTGTTAAAAGAGACAAAACAAA
ATTCTTTATTTACATGAGAGGGCCTGAATGTACACGACTAGATGTAGATC
CATAAtggcaaattttaattttgatgcgTCCTATTGTATGCCCTATATGT
AATTGTATGGCAATCATTCAGAACTTTTCTCTTGCTCACTTTTGATATGT
AAACATTGGATCTAAAAACATTTCTACAACGAGATTTATAGGAaacagct
gcccccccccctaaacgaaaatctttgataatttttgaaagacTTGTCCA
ATCGACATGAAATTTTCTCAGTGTGTACCAAATATGGATTGGCATCTTCA
GTAAAAGCTCCGGcatcatcgatgacgtcattaccacctgatgacgtcat
taaaaatgCCACAAATTGGAACCCCTTTTAACTATATTTCTTACTCAAAT
TTTGTGTGGCAACTCCATACGACATATAACTTTGGggggtcatttttttg
ccacCTGAGTATTTACAGACCGGCCTAAAAGAGCCTTTTTAGCCTAAATT
CGGACTTAACATTCTCAGGATTGAGAAATGGTAAGATCTTGATTTTGACC
AGTGGTTAGGAATTGATTATAGAAGCTTGCTGCCTTAATTTCAACGAAAT
CGGACATGTGGTTGTCCagaaagtgagcattttaggtAAATTATTGACTG
TTCTCTAAAATAGGAACCACGCAGGTGGcttacttgaaattttccacATT
CCTCAGATGGTCAGTCAATGCCTATCACTCGTCAAAATTTCGGTAGTTCA
TGAGTTCCGGAGGGGGGCTATGTGTATTttgcagaccggtctgtaaagtA
TTAAATATCAATgggacaaaattttgttggtcaCTTGTTGCACTTGTTAC
TTTTAgttgaaaaattatgattttagcCAATTTGACGTTCTtatctgtaa
aataccaaccaaacaggtcaacttgaaattttgcaagtcATCCCGTTTGT
CTTTTCAAGTCATCAGCATTTTATAGATATTGAGATTTCAGACCCAACCC
TCCCCCAAAATGCTTCCTCTATTAAAAATATAAGAAGATGCATGAAAGGT
TAACCCTCTCCCTTGTCAAATCCCTCAATTTTCTCATCGGTTCTTCTCAG
GCCTTAGTTGTGTATACTTTGctttcatataaaaatatatcttttCACAA
TTCTTGTCATTacattttaggtgaagaaaacgCTCTTACACTTTCAGAAG
TAATGAAGTTCATCACCGGTTGTTCTTCAAAACCAGCGTCTGGGTTACCA
GGGAAAATCACTGTGATATTTGAGAAATATTGTCCCGAAAATTGCAGATG
TAAACCCACAACTTCTAGCTGCGATATTCAAATCGAAGTTGCTTTGCGCT
ACACTACCAAACGTGACATGATGATAGCTTTAACAGATGCATGCCGCGAG
AGTAAAGGAATG

Coding sequence (CDS) from alignment at sc0000103:256925..263986+

>TCONS_00010171 ID=TCONS_00010171|Name=TCONS_00010171|organism=Clytia hemisphaerica|type=CDS|length=2403bp|location=Sequence derived from alignment at sc0000103:256925..263986+ (Clytia hemisphaerica)
CCTGAACTTTTCCACTTGCTTCATGGGCTCAATAATGAATTGATTGTGGA
TACAAACGaaaaggttgaaaaattcgACTCAAGATATTTGACTATGGTGG
AAGTTGAACATTCAAACTTTACAATGGACCTTATCAGTGGGAGTAAAATT
AACACCCTACCTAAAACCATTCAAAATCAACAATGTCCTCTTTGTCGAAA
ATCCTTTGCTTCTTCAGAAATTGAGAATCATGCATCAACCTGTGGAGAAA
AGAATCACATGGGTGGATTCAAAACATCAGAGAAAAAAGCTCTTTCCTTA
TCGTCTGGTATCTCGACCAAAGCCAGACAAGTTCATTCCAGAAGAGAAGT
ACGCTGTCCTGTATGTAAAAAGTTTTTCGCGAGTTCAGATGTTGAGGAGC
ATGCCATTCAGTGTGCTGATGAAAAATTTGCAAACACTGTTGTATGTGAT
GATGATGAGAGTACTTCTTGTTCAGATGGTGAAGACATTGGAATGGAGGA
CACTGAAGTAGCAATAACCATTAAAGATGTAATTTCTTCGTTGGCTATTG
ATTTTAAAAGTGAAACATCAATTAGAATCAGACGAGGAAACTGTTTCAAT
GATTTCGTCGAAAAAAGGAGCTCACCGTTCATGAAGAGACAAAGCAAAAA
CAATGCATTAAGAATAATTTTTTACGGTGAACACGGCGTGGATCAAGGTG
GTGTACGAAGAGATTTCTTTACAGAAGCCATTCAAGAGATCAAAGACCAA
TTGTTTGTTAGCAAGGAAGATGGTATGCTGCCGAGTTGTACGATGACTTA
GCCTGAACTTTTCCACTTGCTTCATGGGCTCAATAATGAATTGATTGTGG
ATACAAACGaaaaggttgaaaaattcgACTCAAGATATTTGACTATGGTG
GAAGTTGAACATTCAAACTTTACAATGGACCTTATCAGTGGGAGTAAAAT
TAACACCCTACCTAAAACCATTCAAAATCAACAATGTCCTCTTTGTCGAA
AATCCTTTGCTTCTTCAGAAATTGAGAATCATGCATCAACCTGTGGAGAA
AAGAATCACATGGGTGGATTCAAAACATCAGAGAAAAAAGCTCTTTCCTT
ATCGTCTGGTATCTCGACCAAAGCCAGACAAGTTCATTCCAGAAGAGAAG
TACGCTGTCCTGTATGTAAAAAGTTTTTCGCGAGTTCAGATGTTGAGGAG
CATGCCATTCAGTGTGCTGATGAAAAATTTGCAAACACTGTTGTATGTGA
TGATGATGAGAGTACTTCTTGTTCAGATGGTGAAGACATTGGAATGGAGG
ACACTGAAGTAGCAATAACCATTAAAGATGTAATTTCTTCGTTGGCTATT
GATTTTAAAAGTGAAACATCAATTAGAATCAGACGAGGAAACTGTTTCAA
TGATTTCGTCGAAAAAAGGAGCTCACCGTTCATGAAGAGACAAAGCAAAA
ACAATGCATTAAGAATAATTTTTTACGGTGAACACGGCGTGGATCAAGGT
GGTGTACGAAGAGATTTCTTTACAGAAGCCATTCAAGAGATCAAAGACCA
ATTGTTTGTTAGCAAGGAAGATGGTATGCTGCCGAGTTGTACGATGACTT
AGCCTGAACTTTTCCACTTGCTTCATGGGCTCAATAATGAATTGATTGTG
GATACAAACGaaaaggttgaaaaattcgACTCAAGATATTTGACTATGGT
GGAAGTTGAACATTCAAACTTTACAATGGACCTTATCAGTGGGAGTAAAA
TTAACACCCTACCTAAAACCATTCAAAATCAACAATGTCCTCTTTGTCGA
AAATCCTTTGCTTCTTCAGAAATTGAGAATCATGCATCAACCTGTGGAGA
AAAGAATCACATGGGTGGATTCAAAACATCAGAGAAAAAAGCTCTTTCCT
TATCGTCTGGTATCTCGACCAAAGCCAGACAAGTTCATTCCAGAAGAGAA
GTACGCTGTCCTGTATGTAAAAAGTTTTTCGCGAGTTCAGATGTTGAGGA
GCATGCCATTCAGTGTGCTGATGAAAAATTTGCAAACACTGTTGTATGTG
ATGATGATGAGAGTACTTCTTGTTCAGATGGTGAAGACATTGGAATGGAG
GACACTGAAGTAGCAATAACCATTAAAGATGTAATTTCTTCGTTGGCTAT
TGATTTTAAAAGTGAAACATCAATTAGAATCAGACGAGGAAACTGTTTCA
ATGATTTCGTCGAAAAAAGGAGCTCACCGTTCATGAAGAGACAAAGCAAA
AACAATGCATTAAGAATAATTTTTTACGGTGAACACGGCGTGGATCAAGG
TGGTGTACGAAGAGATTTCTTTACAGAAGCCATTCAAGAGATCAAAGACC
AATTGTTTGTTAGCAAGGAAGATGGTATGCTGCCGAGTTGTACGATGACT
TAG

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_005709	XLOC_005709	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00010171-protein	TCONS_00010171-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000103	supercontig	sc0000103:256925..263986 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.15929	1.91839	0.160321	0.175425	3.2945	1.36171	2.89466	2.62997	1.31948	2.39433	2.73878	1.84849	1.4295	1.24026	0.856976	1.34285	1.05204	1.1823	1.86138	1.53518	1.16793	2.44429	0.992738	1.45814	1.87598	2.26972	0.640354	0.582832	0.380783	0.222321

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR013083	Znf_RING/FYVE/PHD
IPR000569	HECT_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0004842	ubiquitin-protein transferase activity

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0004842	ubiquitin-protein transferase activity

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00010171 vs. Swiss-Prot (Human)

BLAST of TCONS_00010171 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00010171 (transcript) - C. hemisphaerica