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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00010175 ID=TCONS_00010175|Name=TCONS_00010175|organism=Clytia hemisphaerica|type=transcript|length=214bp
AACCATCAATCACCAAGCCGACATTCATTAAACGATCATCAATCAAACCA
CCATTCCCCAGTGTACCACCGTAAAGACTCGCAACAAGCAGCAGCAGATA
TTGACATGTTCGTTGGAAAGCGACTCGATGATAGATTGAATGCCATTGAA
AATTCGAAATATACGAAGATTTGGTGGGAAAGACTATACTGACATGGTGA
ACACAACATGTGAT Run BLAST on NCBI transcript from alignment at sc0000103:356612..358527+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00010175 ID=TCONS_00010175|Name=TCONS_00010175|organism=Clytia hemisphaerica|type=transcript|length=1916bp|location=Sequence derived from alignment at sc0000103:356612..358527+ (Clytia hemisphaerica)
AACCATCAATCACCAAGCCGACATTCATTAAACGATCATCAATCAAACCA
CCATTCCCCAGTGTACCACCGTAAAGACTCGCAACAAGCAGCAGCAGATA
TTGACATGTTCGTTGGAAAGCGACTCGATGATAGATTGAATGCCATTGAA
AGTAAGTTTTGTAGCAATGATTTAGATTCCTATTATTTCGGAGAATTCTA
AGTGTAGGAAAGGTGTAGGAATAAGATTGAGATAGAGAAAATTAGTTAAG
GCCAATTGTAAAATCCATATGTTAAATACTTTCAAGAGGGNTGACAAAAT
TAGTTATGGCCAATTGTAAAATCCAtctgttaaatattttttagaggATG
TCCACCACTTGGTAAGGCTTGAGTATTTCTTAGACCTCCAGACTCCACAT
GATACAATATATCATTATCGGTTGATTATCTTTGAATATTAAATCTAGTG
TATTAGTGTAAATCTAAAATAGACAAAGGGAATGATCTAGTGTAGTGTAA
AGGtgatattttgtcaagaatattAGCATCTAATCATGATCAAACCAAAC
ATATATTTGACTTTGTTCCgagaaaatgtgaaaattatATTGCCATTTTC
CTAAATAGCCTATAAATAGAACATAAGACGTTTTACCATTTCATTCAGAG
TCTGTTGCAGATGTCAACGAAAGACAAAGAAAGCTTTTGGAACAGCTGGT
AAAAATCCACGAACTTTTAAAGTTTAGAGATAGGAACGACAATGTTGAAA
GTACGATTCCCACAATTGAAAACCAGGAGGACTTTGAATCCGTTGAAAGT
GCTCTGGAAAGCATAAACACAAAAAGTGAATTAGTGAGTACTATATGTTA
TCACTGTCTGTACCCCAAAATGCcgataaattttacttttttctctGATA
CCATTTAATAACTGGTCTCGTAAGAAAAATATCCGAGCTGTAAACATACT
TAATATAAACTCTCGCAGACGTCAAACTTAAAACCTACATTTTTGGACTC
ACTATCGTTTTGTGGTGCGGATAGTGTATCTTTGGAGTAAAGCTAATCAT
TCTGCATAGTAGACATAAAATTagtatatatttaaaaattgttttaagtA
AAGTTTATTAGTAGCTTAACCAGAATTTTTTTCCCATTTGCTATTTTTCT
TTAGTAAAGAGTTCAAAGCAATAGTTCTCAGTGAATAAATTGAATTGCtt
ttaatacacccctgtgtaacagacccggtaggactgGTGGAGCCCCTACC
AACTGAATAATTAGGCTAAAATTTCGTCTCCAAAgagaaaaataccctaa
aatttcagctccactggaaaattgactttggtttCAGCCCTATTtgaaat
tgaatggaaaaattgcactccaaaaccatcccactgaattttctcaCCTG
CGAACAATggaatttctatccctattcgtatttcgataaaaaatttcatt
tctagaaGTACCTCCTGGGTTGTGAGACAGTGGTGTTTTATTTATTAATC
TATCTTTACTAGCTATAACAATAATCGGTAATAAAAAATGCGCGATCTCT
CGTTTAGTTATTTTTCTGAAGACTCTAAGCAATTTGGGCGATTTTtgagc
gcagctggtttatctTTAATTCGGGTTATTAAGGTAAAGCCAATGAAAGT
AACAAACTTTAGCTATAGCCTTAGCCATATTATTTATAAGGTCAAACAAA
CTTAATTACGCGTTTGACATCTTATCTCATACTCCTCTGAGACTTTCATG
TTTCTTCCAACTTTCTACGGAAGGGAGTATGTGGAATTAGCTCAATCAAA
TTGAGGATTTGAGTTTAAATCATAAATTATAttactttcaatttttgcaC
TAGATTCGAAATATACGAAGATTTGGTGGGAAAGACTATACTGACATGGT
GAACACAACATGTGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00010175-exon-sc0000103-1491911889:356612..356762 | TCONS_00010175-exon-sc0000103-1491911889:356612..356762 | Clytia hemisphaerica | exon |
| TCONS_00010175-exon-sc0000103-1510915933:356612..356762 | TCONS_00010175-exon-sc0000103-1510915933:356612..356762 | Clytia hemisphaerica | exon |
| TCONS_00010175-exon-sc0000103-1575043694:356612..356762 | TCONS_00010175-exon-sc0000103-1575043694:356612..356762 | Clytia hemisphaerica | exon |
| TCONS_00010175-exon-sc0000103-1491911889:358465..358527 | TCONS_00010175-exon-sc0000103-1491911889:358465..358527 | Clytia hemisphaerica | exon |
| TCONS_00010175-exon-sc0000103-1510915933:358465..358527 | TCONS_00010175-exon-sc0000103-1510915933:358465..358527 | Clytia hemisphaerica | exon |
| TCONS_00010175-exon-sc0000103-1575043694:358465..358527 | TCONS_00010175-exon-sc0000103-1575043694:358465..358527 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000103 | supercontig | sc0000103:356612..358527 + |
Blast
The following BLAST results are available for this feature:
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