TCONS_00010196 (transcript) - C. hemisphaerica

Overview
NameTCONS_00010196
Unique NameTCONS_00010196
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1260

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00010196 ID=TCONS_00010196|Name=TCONS_00010196|organism=Clytia hemisphaerica|type=transcript|length=1260bp
CTAATGATTGCTGTTTGTACCATGGTGACCACCATCCAATCCGACACTAT
AGAAGATACAATGAATAATAATATCAATGTGGGTGCAAGTGAGAATGAAC
CTCATTTTCGTTTGCTGAAGTATAGAGATGTTTACGAGTTGGCGAAGAAG
AGATTACACAACCCTCTTCATTTGGAAGAATTGGCCAAGAAACTGAAGAA
AATGGATAAAACGGAAATGATGTACAAACGACAACGAGATACTGGGGATT
CAGAATACGATGCCACAGCAGAAAAGCAAATACAAAACCTTTTGCCAGAC
ATTTTACATCAGTATGGTGTATTGGAAGTAGACGAAACATGGCATTCCAA
ACCAATGCATTTTGAAGATGCACGTCTCCAAAGGATCTGGCAACTTGCCA
TCGATGAAGCGAATTACAATGGTGACGAGCTCCGAGAATTGCACAACGAA
CTTCACgccatgcaaaaaaaattatccaacTACATCTGGACCGTTCGCCA
ACTAGAATCactcaaagaaaaagaaaacaacgaAACAAATAATTACGTca
gcgatgacgtcatcgacaaTTCGGTTGACGGAAAGGCTGACGAGGAAGAG
AAGACGAATGTGGAaagtttgaaatcgaaagtgaaaaatgaatttGGGAG
TTTGGACGAAGAAGTCTTTGCATTGAAAGATAAGGTAGCGATGCGAATCA
AACAAGACAAGTTAGGCGAACTGACGGACAGTCGTGTCCGAGAATTGATG
GAAAAAGCGAAAGAAATGATGCTGGAAAAGGACCTCCAAAAATTTAAGtc
GGAGCTTGATCATTTTCAAAACCGTATCTCGAAGTTAGAACACTGGCGGA
AAGTGAGTGAGAACTTGAGAAAACATTTGGAGGAAAACCAGTTCGAAAAA
GAACTCGTAGATGAATACCAATTCTCGAAAGCCAAAGTTAAAGAATTGAC
CAAGTTTGTAAAGAAGTACCACACCACATTGTACAACCGTCTCTACAAAA
ATTACAAGAATGAACTATGATTCGCCATAGCAAACCCTTGAATCTACAAA
CCCTGTCAAGGGAATTCGAAGATAGGATTTCCGAACCAAACAACCAGCTG
AGCGGTATTTGTAAGAGAGGTGTGTCTTATTACTTCGAATCGGTGTAATT
TAGCGAAAGCGTTTTCCACACAGCACCACCCGTTCTGTTTCAATAGCGGT
GCACATTCGGGTGAACCTACTAATTTGACATCTCTCTTGTTCAACCCGAA
AGCTTTTTCG
Run BLAST on NCBI

protein sequence of TCONS_00010196-protein

>TCONS_00010196-protein ID=TCONS_00010196-protein|Name=TCONS_00010196-protein|organism=Clytia hemisphaerica|type=polypeptide|length=339bp
LMIAVCTMVTTIQSDTIEDTMNNNINVGASENEPHFRLLKYRDVYELAKK
RLHNPLHLEELAKKLKKMDKTEMMYKRQRDTGDSEYDATAEKQIQNLLPD
ILHQYGVLEVDETWHSKPMHFEDARLQRIWQLAIDEANYNGDELRELHNE
LHAMQKKLSNYIWTVRQLESLKEKENNETNNYVSDDVIDNSVDGKADEEE
KTNVESLKSKVKNEFGSLDEEVFALKDKVAMRIKQDKLGELTDSRVRELM
EKAKEMMLEKDLQKFKSELDHFQNRISKLEHWRKVSENLRKHLEENQFEK
ELVDEYQFSKAKVKELTKFVKKYHTTLYNRLYKNYKNEL
Run BLAST on NCBI

transcript from alignment at sc0000103:180836..196076-

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00010196 ID=TCONS_00010196|Name=TCONS_00010196|organism=Clytia hemisphaerica|type=transcript|length=15241bp|location=Sequence derived from alignment at sc0000103:180836..196076- (Clytia hemisphaerica)
CTAATGATTGCTGTTTGTACCATGGTGACCACCATCCAATCCGACACTAT
AGAAGATACAATGAATAATAATATCAATGTGGGTGCAAGTGAGAATGAAC
CTCATTTTCGTTTGCTGAAGTATAGAGATGTTTACGAGTTGGCGAAGAAG
AGATTACACAACCCTCTTCATTTGGAAGAATTGGCCAAGAAACTGAAGAA
AATGGATAAAACGGAAATGATGTACAAACGACAACGAGATACTGGTTTGA
TAACTTTTTTGTTCTTTTTCACCTTGAAATAAACAAATGATTTTCAATAA
TATACCCATAGTGACATATAAAGACTACTCTTCACTTGCGCGCGCTGCGA
TCGTATTTTTTTGAGAAAAGCTTCCACGCTATTGGTCAAGAGAAAAATGA
AGCAATTCCATTGGCGCGATCTGACGTAACGGTTGAAAAAAGTTGAAATA
TATCCAACTTTTTTTTCGAGTGCGCGCTACATTTTTATTGACAAAATCTT
TTTTCCAAGCAAAAAGGATTAAAGCCAAACAACGGTGTGATCAAAGTGCG
CGCAAGTGGAGACTGGCCTTAATGTAGATATAACCGGTTTTATGACTTAT
AGATAAACACAAACTCAAAATGAATTGAGGTTCAGATTTCACGAGTAGTT
AAAATTGATTTAAATGTGGAGCACATTAAATATGTTCCTAATGTGTATAT
GACGTCATGATTTATGACTATTTTGAGCCAAGTTGTCTTTTCCTCGATGT
CTTGCAGTCTCGTTCTACATTTTGATTGTCGCTGTTAAGCCGAAATTTAC
TGGTTATTTTGTGTCTTTATGAGAACCATATTAATTTGTGTCTTTATGAG
AACCATATTAAGTTCTTACTATTCTATCCACAATCAGGGGATTCAGAATA
CGATGCCACAGCAGAAAAGCAAATACAAAACCTTTTGCCAGACATTTTAC
ATCAGTATGGTGTATTGGAAGTAGACGAAACATGGCATTCCAAACCAATG
CATTTTGAAGATGCACGTCTCCAAAGGATCTGGCAACTTGCCATCGATGA
AGGTGAATAAAATTCTCGTTCCAATAGGATTATTACTTAGAATGAACACC
TTAAGGGAAGGAGTTTTCGTGGGAAGAAATTTCGCGGTTCACAGCTCAAT
AGAATTTTTTTCTTTACATTATGGGCCTATTTTACCCTAAAATGACCAAT
TTTTAGAGGCGATTTTTTTAATCCTGAGAATGTTTGTGTTTCGTGGAATT
TAATTTAGCGGATTTGCCAAAAAACCGCGAAATTAATTTCCCTGAAAATT
TGTTCCGCGAATATGTCCTCCCGAGAAAATTACTTCTCTTAAGGTAAGTT
ACATGTTAAGAGTCAATTTAAGGAGAAGACCGACAAATGAGTTTGCTAAG
GGTGCGAACTTCTTGATGTGACCTGCTAAAGGAGTTTCACTGTGTACTGT
CCAACCTAGGAGTTTCACTGTGTGCTGTCCAACTTAGGAGTTTCATTGTG
TACTGTCCAACCTAGGAGTTTCACTGTGGTGCTGTCCGACTTTGGAGTTT
CATTGTGTGCTGTCCAACCTAGGAGTTTCATTGTGTGCTGTCCAACCTAG
GAGTTTCACTGTTTGCTGTCCAACTTTGGAGTTTCATTGTGTACTGTCCA
ACTTTAGAGTTTCATTGTGTACTGTCCAACCTAGGAGTTTCATTGTGTGC
TGTCCAACCTAGGAGTTTCACTGTGTGCTGTCCAACTTTGGAGTTTCATT
GTGTACTGTCCAACCTAGGAGTTTCATTGTGCGCTGTCCAACCTAGGAGT
TTCATAGTGTGCTGTCCAACCTAAGATAACAACTGTTTCTATGCACTACT
TCTCATTATTACTGGCCAAAAAGATGGTGGTTAAAGGTTTACTTGACCTA
CTTGACTTAAGTGCATAATCCCTCGAGGATCTTTGCACACTTCTTGGAGA
CAAACTCTTTCCACTTTTCTCTGTCACAGGCACGGCGCTCAGCAGTAAGA
AGTAGGATCCATGTGTCTTCTCGGATTAGATCGCTCCATCTTTGGGGGAC
GTCCACGAGGTCTTTTTTCCTTAAAATCACGGTTATAAGCCTTGTGCACA
TAGTTGATATTGGGGTCTCTTCTCGTGATGTGACCAAACCAGTTCATTCT
CTTCCTTTTGATCATATCAAGGATATCCATCTTGACACCAAGAGTACCCT
TTAAATCTACTTAAATCTACAAGGCTTACTAACACTGAGAAAACTTTTTA
TCACTTTCAGCGAATTACAATGGTGACGAGCTCCGAGAATTGCACAACGA
ACTTCACGCCATGCAAAAAAAATTATCCAACTACATCTGGACCGTTCGCC
AACTAGAATCACTCAAAGAAAAAGAAAACAACGAAACAAATAATTACGTC
AGCGATGACGTCATCGACAATTCGGTTGACGGAAAGGCTGACGAGGAAGA
GAAGACGAATGTGGAAAGTTTGAAATCGAAAGTGAAAAATGAATTTGGGA
GTTTGGACGAAGAAGTCTTTGCATTGAAAGATAAGGTACCAATATTTTTG
GAATAAGAACTGGGGTATGTCGATTAGTTTATTCTTCAGGTCGATATGTC
TCCCAAATCTTAGCATGGAATTTAAAAACAGTGAAGCTGAATGGAAAGAG
TCAGGCCTTGGGAAACTATCGCAGGTCTTTTATAAATTGTTATTTAATCT
GAAATATCGACTTGCTATTTTATTGAAATTCCAAATTTAGAGAGTTTACC
TTTTACCGCATTCACTCTCCCTTTGAAACGCAAAAACATGATCGTGTAGT
ATTCTAATCAAAGATTATTGATTTATGGAACTTTCCAGGTAGCGATGCGA
ATCAAACAAGACAAGTTAGGCGAACTGACGGACAGTCGTGTCCGAGAATT
GATGGAAAAAGCGAAAGAAATGATGCTGGAAAAGGACCTCCAAAAATTTA
AGGTAATTAAGGCAGTCAGGCAGTAGCTTGGCAGGGGGCTGGGGGGTTTG
GGCAGTGCAGTGCCCCCCCCCCCCCCAGCGGCTGATTTTTTTGGGGGCGC
CAAAATACAAAGGGAGCAAAGAGACGCCTCTGATTACTAATTACGGTGCT
CGCTTGCTCTTTTTCACCTAGATAGGGCGGTTTTCGGCCTAAAAGAGAGA
AAATATTCCTAAATTTTTGTTCTCACTTCGCTCGCGTAATCTTTACATAG
ATATTTAGATTTCATAGGGGGTGCCTAATATAATTTAAATCAAAATATTC
GAAATTTGCCTCCCCATTTTGCCCGACTTTTTGTCGACCCACCACGCTAC
TGCAGTCAGAGTAAATCTGGAAATCTTTTCAAGTCGCTTTAACAGACCTT
CTATGCATTCTGATGGCAAATAGCTAACCATTTAAACTTATAGACCTTTC
TAAGTGCTCTGGTACAGTTTGGATGATACGGGGCTGTCTCATTTTAAATG
AACAGAGGTTCAGCCATTATACGCGTAAGTCGTTTTTTTAACGGAAACGT
CTGAAAAAAAACTGGGATTTGACGAGTGTCAGTTACAAGATCCGGCTTTT
TTCAGGTTCTTCCGTTAAAAAATATGACGTTGTCTTGCCTAACGTTTCTT
CTTTTTCAGTCGGAGCTTGATCATTTTCAAAACCGTATCTCGAAGTTAGA
ACACTGGCGGAAAGTGAGTGAGAACTTGAGAAAACATTTGGAGGAAAACC
AGTTCGAAAAAGAACTCGTAGATGAATACCAATTCTCGAAAGCCAAAGTT
AAAGAATTGACCAAGTTTGTGAGTAATACTCCTCTCCCAGTACTTCCTTT
CGCAGTACCTATTTCGCAGTTAATTCGAATTGCTTTGAAACTCAAGCTAT
GTGACGACCTAGTTATTCAGTCAAAACATTCGAATCCACGTTGCCTTTTG
CTTAAAAGCGACAGCGAAAGCGACTGGGTTCTAAAATTTATGTATTGTTT
ATGTATTGTGTATGTACGATTAACAGTTGATTTTGGCGATTGTTTTTCAC
CTTTTTAAACAGTTTGCGCGTAGAAAAGGTTTCGAACATTTTTTTGTCCT
TTTATCAGCCAACCAATTATTTAATGAATTTAGATATTTTCCCCGACGTA
ACGTTACGAGAAGAGTTCTTTGTTTGAATGTTCATATCTTTCCAACCTCA
CCCTTAGGTAAAGAAGTACCACACCACATTGTACAACCGTCTCTACAAAA
ATTACAAGAATGAACTATGATTCGCCATAGCAAACCCTTGAATCTACAAA
CCCTGTCAAGGTATATCGTTCTGTTGTTTTTCCTATTTCCTACCTAACCT
CGGCACACTTCTCAGCAAAAGCACGATATCTAGCCCTTCGGGCTTTATAA
ATCTATGGTTCTCCCAAGCAAGACAAGTGAACACGAAACAGAAATGGACT
TTCATAAACTGTAACAATTACCGTTTGGTGGTTTTTGAATGACTTTTGAT
GCGGAACGAGCAGACCAAAATCTGATCGCTGTCGTATGAATCTTTAGAAA
AAACATCAATTGTGAACATTTACCGCGAAAGATAATATTTTTCGATAACA
ATATATTTATAAAGTGTAAAAAAAAATTAAAAGGTGAGAGCTTTAAAGAA
GGATTTCGATATTAAGCAGAGATCCATTATTGTAGAGATTTATTAACCAG
AGTTGATGTAAAATATATGCGCCAAATGCTTCTGCTCTACCAAATGAAGA
AGTATGATTTTAAAATAAGACACACCCGTGTGTGACCACTGTGCCAAATT
TCATGTTTTTATCACAATTAGCACGATTTTTCTTTAAAATGACCTCACTA
CACAATTTGCTTTACAGTATTTAAAGTTACTTGTTGTTACATATTAAGAA
TTTTACAATAAGATTGAAAATGGACCCATTTGGATCAGATGTGAACTGTC
ACTTAGGCTCATCCAATTGGGTTGTTGTCAACGATCCGAACTATTAGGTC
AACTTCAAGTTATCATTGTCGTTGAGAAATTGAAAGGTTTCATTTCATTT
TCATCGAAAGTTCTCTTGCTTTTTGTTTGATCTTTTGAGGAGTCATACAT
CCAATGTCTCTCTCTAAATCGATCAGCTTAAATCCTGCAATCACTCTACC
AAAACTTTGTTCCCAAAACTCGTCAGATTTAGGACCCTCCAAATACCAAG
CAATAAATTCCCCATTTTTGATTTTGTCGTTACAAATGGTCGTCATTGAA
AGATCCGTCATCGTTTCTACCGACTTGTCGATACGTTCCCATGGAAACAC
AGCTTTTACAATACGACACTCTTCGTTAACGTAACCCATGACGTGATACG
TGACTTGTAGATTATATAAACGCGTCGGCCCGTACGTGACGTGCTCCCTG
TACACCAGGCCACCTTCCGGTACTTCGAAAACCGGTGAAGATGTCGCCAC
GACGGTTTTTGCAAAATATGTAAATGCTGTTTTACGTATTGGATCAAAGG
AAGTGACGTGGGCCAACGTGTTTTCCATCTTTGTCCATGCATTTTGTTTC
AATAGCGGTACACATTCGGGTGAATCAACGAGTTTAAGGTCACCAGCATT
CAATCCAAAAGCTTTTTCGATATCACTGACTAGAACGTTATCTATGGACG
CCATTTTGTGAAATAATCAATTGAAGCGCTACTTGGTTTTGCTTTTTGCT
TGTTTAATCCAGAGATTAAAAATTATAGCAGTTTAAAGACAATTTCTACA
AAAAATAAAAAATTTCTCCTTGCTCAAATCTCATAGTGTTTTCTGCTATT
GATGACATTGATAGCAAAGGAAAACCCGAGAGAAATACAGTCATTGTTTG
GTTGAATAGCTACAGAGGAAAACCACAAAAGTTGAAAATAGTCGGTCGGG
CAAAGCCGGACAAAAAACCCATTGACATAATTTATGCCTAAAACAAAATC
ATAAACTGCGTAAAAGAATGGACTCTAATGGGCTTTTCCAGAAAAAAACC
GTGCACCCCCTGTTGAGGAGGTCCAACTTTTTGTGACCTACCCCCTTGGA
ATTCCAGGCAATTTTAGGATCATACCCCTCTGGAATTCCGAATTTTTACA
AATTTTCAATCATTACCCCCTTGGAATTCCGCTAATTTTTGAGGGATTTT
CGTCTACCCTTATGGAATTCCACTGCATTTCAAACCTTACCCCCTTGGAA
CAGAAATTGACCTCCTCAACAGAGGGTGCACGATTTTTTTCTGGAAAAGC
CCAATAAGTTCGCCAATAGGAAAGCATATCAACCTGACCTTCGTTGTAAC
TCTTTCTAACTATAACTATCTCTCTCTTTAATCTTTTAAATCTCTTTATT
AAAAAGTTGTGTGCTTAGTTTTCCAATAATACTTTCTTAAATTGAATGAT
TTCATGATCCTATCTAAAAGCTTTGTATAGGATATCATTCTAATTCTAAA
ACGCCCCCTTCTCACAGATCCGGTAGGATTGTTTTAGCCAATGGGGATAA
AAATAACGGACTGAAACTCGGGGATTGAAAAGGGATTGATATTCCCATAC
TTTTATAGCTGGGGATTTTCAATTCTTTTTTTTTCAGATCAGAAAATTCA
GTGGGGATGGGAAAAATATAAAAATTTTGCAGTGAAGATCGTTTTATTTG
ATTATTTTCAGTGGGGAGAAAAATTGGAGGATATATTTTCATTTGGTGCG
ATATTTTGGCCAATTTTTTCAGTGGGAAGGGGCCCTAGTGGGTCTGTAAA
AAGGGGGCGTTCTAGATTTACGAATTATTTCGCGAAATGTTTTGTCTCAT
AAGTAAGTAAGTAAATAAGTATTCATCTGGCGGCTGTCGGCGGGGCCGCA
AGTGAAGGAATCTATCCCCTTTTCCATTTGCGCTAGACCTAGGAAATCGA
ATGCTAAGGTGGAGTGCCACCCCTACTCTCAGCTCCTAGTAACTTGTCGC
CTAGATCAGATTATCCAATCTAGATACCCCTCGCAGAGCTGGCGGTGACC
GGGGATCGAACCCACAACCCTTGGATTGTAAGGCAAATGGTCTTACCCAC
TGAGCTACCCGGTCTTATAAGATAAGAGACCAATCTCAATCCCACTACTC
TTGTCTCCCAAATAAACGGGGGGTCCGAATAATCAGGGGGGTAGGAAAAT
TTTCTAAATTCTAATAAGAGGGGGGGTGGAATAAGAGGCGGTAGCTAATT
TGAAAACAGATCGTTTTTTTAACTGATATCAATTTCAACAACAAAAAAGA
AACTTTATCAAATTAACACGTAAAATAAGAACCAATACTAACAAAAAGGA
AAATTTTAACAGGTTTAAGGTCTATCTACACAGTAATAAAATATTGAATT
ATTCGAATTTAATTAGCGGGGGGGGTCTTAATAAGAGCGGGGAAATGGAT
TTTTTTTCTCTTAACAATTAGCGGGGGGACGTCTATTCGGGAGACAAGAG
TTTGACTGTTGATTTGCCAGATTCAAAGAACTTTCTGTTTGTCAGCTTCT
TAGAACTTTCTGCGGTGTAAATTCATCCAAAAAAGTTTGAAATATCACAA
TATGGAAAACAATTTTTTAGATCTTGTATCCATATTTTTCTGAAGGTCTT
CCCGTAATGCAATAAATTAACTTTGTCCCGCCTAAGTCTATTAATATTTC
CGCACCTAGTTGTATTGCTAAATTGATGGGTGGGTGTCACGTTTTTAAGT
CATTTTTTCAGGAAAGATAAAAAACTCGACCCTTAATTGATACGGTTTAA
CTTTAAATCTCAAAGAAGACCTGAGAGAAGATATTTTGTACTAGGGTAGG
GATGCAAATTATGCTTTCTACTTTTGCTTTGCTTCAAGGGGGTATATATG
ATCTTATCGGAGCTCTTCATATTTGATCTAAGTAAGGAGAATAAGATTGG
GGTTTCGTGCTCATTGAAATAAAAATAAGGAAAGGAATGTTATCATGAAG
AAAAAATTAAAATGAATTGGAAAATACAGATGAAAATTTCACCATATCAT
AGAGTTGTGGTATGGTACCCATTTCATGTCTAAAGAAAATTAAATATAAG
AACAAATATTTTGAAAGGAGTTTCAAAAAATATCTACAATTATTTTTCAT
ACTTTTGATATAGATTGGGATACCGATGATTAGTATATATTGGGTTTTTC
CAGAAAAAAGATTTTACCCCCACATTTGAGGATATTGATTTTTCGAAGTA
TCGAACCCCCTGGATATCCTCCTTTATTAATAAAGATCCCCTGGATATCC
ACTTTTTTTAAATATGCTTAACCCCCTGGATATCATCTCTTATAAAGATG
CTTACCCCTGGATAACCGCTCCCTTGTAGATATTCAACCCCTTTGATACC
CGATATCCTCAACAAGGGGGCACGGACTATTTCTGGAAAAACCCATTAAG
ATTCCTTAAATAAATTGTATTTTTAACTACTTGTTCAAAATTTCTTTGGC
TCTTTCTTTGATCCATCCTGGTGTCCAAAAGTTGATTTCTTTTTCTAAAT
CCATCGCATGAAAGGACGCTTAATACTTCCCTATGTTATCTTCATGTGAG
ATATATTGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNTCAGAAACTCAGACAGTCAGAAAAGA
GAAAGACAGGATCAGAGATAAGAAAATAAAATAAAAACATGAAGGTAACT
TTGGGCGATCCGATATAACTTCTTCCGTCTATTCGGGAGACAAGAGTTTG
ACTGTTGATTTGCCAGATTCAAAGAACTTTCTGTTTGTCAGCTTCTTAGA
ACTTTCTGCGGTGTAAATTCATCCAAAAAAGTTTGAAATATCACAATATG
GAAAAACAATTTTTTAGATCTTGTATCCATATTTTTCTGAAGGTCTTCCC
GTAATGCAATAAATTAACTTTGTCCCGCCTAAGTCTATTAATATTTCCGC
ACCTAGTTGTATTGCTAAATTGATGGGTGGGTGTGGTCACGTTTTTAAGT
CATTTTTTCAGGAAAGATAAAAAACTCGACCCTTAATTGATACGGTTTAA
CTTTAAATCTCAAAGAAAACCTGAGAGAAGATATTTTGTACTAGGATAGG
GATGCAAATTATGCTTTCTACTTTTGCTTTGCTTCAAGGGGGTATATATG
ATCTTATCGGAGCTCTTCATATTTGATCTAAGTAAGGAGAATAAGATTGT
GGTTTCGTGCTCATTGAAATAAAAATAAGGAAAGGAATGTTATCATGAAG
AAAAAATTAAAATGAATTGGAAAATACAGATGAAAATTTCACCATATCAT
AGAGTTGTGGTATGGTACCCATTTCATGTCTAAAGAAAATTAAATATAAG
AACAAATATTTTGAAAGGAGTTTCAATCTACAATTATTTTTCATACTTTT
GATATAGATTGGGATACCGATGATTAGTATATATTGGGTTTTTCCAGAAA
AAACATTTTACCCCCACATTTGAGGATATTGATTTTTCGAAGTATCGAAC
CCCCTGGATATCCTCCTTTATTAATAAAGATCCCCTGGATATCCACTTTT
TTTAAATATGCTCAACCCCCTGGATATCATCTCTTATAAAGATGCTTACC
CCTGGATATCGTATTTTTTACTTGAAAAGACACTTTACCCCCTGGATAAC
CGCTCCCTTGTAGACATTCAACCCCTTTGATACCCGATATCCTCAACAAG
GGGGCACGGACTATTTCTGGAAAAACCCATTAAGATTCCTTAAATAAATT
GTATTTTTAACTACTTGTTCAAAATTTCTTTGGCTCTTTCTTTGATCCAT
CCTGGTGTCCAAAAGTTGATTTCTTTTTCTAAATCCATCGCATGAAAGGA
CGCTTAATACTTCCCTATGTTATCTTAATGTGAGATATATTGTTCTTCAT
GTGAGATATATTGTTTTTCATGCGAGATATATTGTTTTTCAGTCGGGCCT
TCGTAGTACCAAGCAATGACTTCATCTGTGGTGAGCTGGTCTTCGCAAAC
AGTCGCCAATGCTATCTTCATGCGAGATATATTGTTTTTCAGTCGGGCCT
TCGCAGTACCAAGCAATGACTTCATCTGTGGTGAGCTGGTCTTCGCAAAC
AGTCGCCAATGCTATCTTCATGCGAGATATATTGTTTTTCAGTCGGCCCT
TCGCAGTACCAAGCAATGACTTCATCTGTGGTGAGCTGGTCTTCGCAAAC
AGTCGCCAATGCTATCTTCATGCGAGATATATTGTTTTTCAGTCGGCCCT
TCGCAGTACCAAGCAATGACTTCATCTGTGGTGAGCTGTTCTTCACAAAC
AGTTGCCACTGCTAAATCAGTGACACGTTCTACTTTCTTGTCTGCGGAAT
GCCATGGTAGGATAAGGTGGAGCAACCGCCTCCGCCCATCATTCCACGCC
ACTGTGTGATAATAAATATGCTAATTATGCAAGCGAAACAAACCATCCAA
AACTTTCTCACTATGTAATTTGCCACCTTCCGGGAAATCGAATATCGGAT
TTCCGAACCATAACACTTTCGTTGCGCTTTTTGAGAACGAACTTTCTTTT
ATGACTTCAAATCGACTCAACTTCGCCAACGTGTTTTCCATCTTTGTTCA
CGCGTTTTGTCTCAATAGCGGTGCACATTCAGCTGAATCGACCAGTTTGA
GGTCACCAGCATTGAATCCAAAAGCTTTTTCGACATCACTGGCTAAAACG
TTGTCTATGGACGCCATTTTTATCTAAGGTGGAAAATATGTACGTACAAT
CTCTGTATATCAGTTGTATTGAAGTTTTTACAAGATGCTCACATAATTGG
TTATTCAAAACAATAGAGATGACGCGTTCTTTAGAAAAATATAATAAAAG
TTTTTTTTTGAATAGTTAACGACCAATCCAATGACAAAAATTCTTGTAAA
TGTTCAACTTGAACAACTTCAACTTGACTTTGATCGAGACAAAAAATATA
GCATTTAAAAAAGTTAAATGTAATTTTGCTGATTTCCCAAAATCCGTTCT
ACTGAGCTAAGGTTGTAGTCCGCTAAAACTAGGCTTCTACCTTCAAAAAG
TTGACAGGTTAGGTGGCTGAAATCGGGCACAGAGGTTCCTTGGGTCTTAG
AATCACAGAAGAAAAACCCAAAAAGTTTTGGCATTTTATAATGACGTCAA
TTTCAATATGAACCCCTGTAATCAAGACTTACAAAACATCTTTACGGTAG
TTTTCAATGATAAGGAGCCTAGGTTTAAGAGACTTAATTCCTGCCATGTT
CAGGTTCCACTCAAACCACATCAGCTATATTTCAAACCTTTCCATTTCAC
ACCGAACGCTTGAGATCAAACTATTTCGTTCACTAACTTAGCAGCCAGTT
TTAGGTATTGGATGTCGAAAAAAGACGCTTAAGGGCTCTGGCCGTAGTGA
ATTTTTGATATTTTTGCCATGCAAAATATTAATTTTTGCCTGATGTAGCT
AACAAACCTTCTGCATGTTATACATTTTCTGTTAGGCCAATTATCCGTGA
GTCCGAAAATTTAAGGAATCGCAATTAAAAAAAATTATGAAGAAGAAAAT
GAAGACTTTTGCGGAAAAAAAGTATTTCAACTTATTTCAACTTAACTTCA
GATTAGTTTCAGTCCTATTTTTTGGAACTAGCTCGGAGGTCTTTTAAATT
AGTCTTTCTTCGTTCGTTCGTTCGGACGTCTGTTACAAGCTTTTCTTGGG
AGCAGACTTGGGTCAATTAAAGTGTCCAAAAATGGAGTTGTGTGAAATTG
CTTCATAAGTTTTTCTGAAATGTAACACAAACAAAGGGCAAATTGTTCTA
AAAATTGGCTGAAGTAGTTTTTCCGCAAAATTCTTTTCTGGACATAAAAA
CCGGATTATAGTATTTAGGGAAATTCCCTTTCCTCAATTTTAAATTGCTA
CTGTCAAGGGGAGAACGGGGATTGTCTCTTGAATAACAATGAATTTGTAT
TCGGGATCGAATCTGGAACCCAACGCTGGAAGAAGGGGAGAGCCTTTTGG
GCATTGTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNCAACGTTCCTCGTTCCCGTACAAAACCAATACGTCTACATTCTTC
CTCGATACGATCGTTAAGCTTTGCAAGCTCTTCACTCTGCCAGCCCAAAC
ATAGAAGTGTTTAGAATCATTCACTAAGAATCATATAATTAAATGCTGAA
TAAGATGGCTATAGAGTTGGTTACTATAGCAATAGTTATAAAATGGTAGA
TCATAAATTCACCATGACACTACATTAGTTTTTTTCTGATCTTTTGAATA
AAAACAGAGTGCAAAGCTTTGAGTTTAAAGCCCGAAAGAGACTAGAGATT
AATATTCAACCTTTTTCAAGCGAGAAAAAGTGAAATCTTAAGGACTTAAG
ATTTCTGCCGCATTTAGAATGACAGACTGAACCTAGCACTTTCTTTGTTT
TCATGCGGCATATTTTTCGAAATCCTGGCGATATGTTTTACTTCCAATCT
AGCGTTTGTGCGAAAACCGCGCGCGGGTCACGCGTTTAGGATGGGAAATA
AGTGGCTTCACTGGGTTGAAATAGATTTTATCGCACTATTTGTGTCAAAT
GTTGAAAATAATTGGAACAAACTATTCGTTTATAAGGAAAATAATACTGA
ATTATTCTATAAATATGATACAGAAATGAAGAATTTATGTACAAAACAAG
GTTTTAGTAATTGAACGTGATTACTCCACCAAAACAAGTTTTACGTTGGT
TGAAAAGGTCCTTTCTTTTGGTTTACCTCTTTGGCCCTGTTTTTCAACCA
GCGAGGTGTCCAAAATCTTATATCATTTTTCATGTCAATACTTTTAAAAG
TTGCCAGAAACTTCCCTAGATTGTCTTTATGTGAGATATATTCCTCCGAG
GTTGGGCCTTCTAAATACCATGCAACGACTTCATCCTCATTCAGTTTGTC
GTCACAAAGAGTGGACAACGCTAAATCTGTGACATGATCGACTTTTTTGT
CTGCCGAATGCCATGGAAATACCGGTTGAACTAGCCGTCTATACTCGTCT
ATCCACCCCACAACGCGGTACTCCACGTGTAAATTATATAAGCGAAACAA
CCCAAATAACACTTTCTCTTTGTATATTTTGCCACCTTCAGGGAATTCGA
AGATAGGATTTCCGAACCAAACAACCAGCTGAGCGGTATTTGTAAGAGAG
GTGTGTCTTATTACTTCGAATCGGTGTAATTTAGCGAAAGCGTTTTCCAC
ACAGCACCACCCGTTCTGTTTCAATAGCGGTGCACATTCGGGTGAACCTA
CTAATTTGACATCTCTCTTGTTCAACCCGAAAGCTTTTTCG

Coding sequence (CDS) from alignment at sc0000103:180836..196076-

>TCONS_00010196 ID=TCONS_00010196|Name=TCONS_00010196|organism=Clytia hemisphaerica|type=CDS|length=1020bp|location=Sequence derived from alignment at sc0000103:180836..196076- (Clytia hemisphaerica)
CTAATGATTGCTGTTTGTACCATGGTGACCACCATCCAATCCGACACTAT
AGAAGATACAATGAATAATAATATCAATGTGGGTGCAAGTGAGAATGAAC
CTCATTTTCGTTTGCTGAAGTATAGAGATGTTTACGAGTTGGCGAAGAAG
AGATTACACAACCCTCTTCATTTGGAAGAATTGGCCAAGAAACTGAAGAA
AATGGATAAAACGGAAATGATGTACAAACGACAACGAGATACTGGGGATT
CAGAATACGATGCCACAGCAGAAAAGCAAATACAAAACCTTTTGCCAGAC
ATTTTACATCAGTATGGTGTATTGGAAGTAGACGAAACATGGCATTCCAA
ACCAATGCATTTTGAAGATGCACGTCTCCAAAGGATCTGGCAACTTGCCA
TCGATGAAGCGAATTACAATGGTGACGAGCTCCGAGAATTGCACAACGAA
CTTCACGCCATGCAAAAAAAATTATCCAACTACATCTGGACCGTTCGCCA
ACTAGAATCACTCAAAGAAAAAGAAAACAACGAAACAAATAATTACGTCA
GCGATGACGTCATCGACAATTCGGTTGACGGAAAGGCTGACGAGGAAGAG
AAGACGAATGTGGAAAGTTTGAAATCGAAAGTGAAAAATGAATTTGGGAG
TTTGGACGAAGAAGTCTTTGCATTGAAAGATAAGGTAGCGATGCGAATCA
AACAAGACAAGTTAGGCGAACTGACGGACAGTCGTGTCCGAGAATTGATG
GAAAAAGCGAAAGAAATGATGCTGGAAAAGGACCTCCAAAAATTTAAGTC
GGAGCTTGATCATTTTCAAAACCGTATCTCGAAGTTAGAACACTGGCGGA
AAGTGAGTGAGAACTTGAGAAAACATTTGGAGGAAAACCAGTTCGAAAAA
GAACTCGTAGATGAATACCAATTCTCGAAAGCCAAAGTTAAAGAATTGAC
CAAGTTTGTAAAGAAGTACCACACCACATTGTACAACCGTCTCTACAAAA
ATTACAAGAATGAACTATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005720XLOC_005720Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00010196-proteinTCONS_00010196-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00010196-exon-sc0000103-1575043694:195833..196076TCONS_00010196-exon-sc0000103-1575043694:195833..196076Clytia hemisphaericaexon
TCONS_00010196-exon-sc0000103-1575043694:195025..195189TCONS_00010196-exon-sc0000103-1575043694:195025..195189Clytia hemisphaericaexon
TCONS_00010196-exon-sc0000103-1575043694:193542..193816TCONS_00010196-exon-sc0000103-1575043694:193542..193816Clytia hemisphaericaexon
TCONS_00010196-exon-sc0000103-1575043694:193125..193238TCONS_00010196-exon-sc0000103-1575043694:193125..193238Clytia hemisphaericaexon
TCONS_00010196-exon-sc0000103-1575043694:192309..192467TCONS_00010196-exon-sc0000103-1575043694:192309..192467Clytia hemisphaericaexon
TCONS_00010196-exon-sc0000103-1575043694:191817..191919TCONS_00010196-exon-sc0000103-1575043694:191817..191919Clytia hemisphaericaexon
TCONS_00010196-exon-sc0000103-1575043694:180836..181035TCONS_00010196-exon-sc0000103-1575043694:180836..181035Clytia hemisphaericaexon
TCONS_00010196-exon-sc0000103-1510915933:195833..196076TCONS_00010196-exon-sc0000103-1510915933:195833..196076Clytia hemisphaericaexon
TCONS_00010196-exon-sc0000103-1510915933:195025..195189TCONS_00010196-exon-sc0000103-1510915933:195025..195189Clytia hemisphaericaexon
TCONS_00010196-exon-sc0000103-1510915933:193542..193816TCONS_00010196-exon-sc0000103-1510915933:193542..193816Clytia hemisphaericaexon
TCONS_00010196-exon-sc0000103-1510915933:193125..193238TCONS_00010196-exon-sc0000103-1510915933:193125..193238Clytia hemisphaericaexon
TCONS_00010196-exon-sc0000103-1510915933:192309..192467TCONS_00010196-exon-sc0000103-1510915933:192309..192467Clytia hemisphaericaexon
TCONS_00010196-exon-sc0000103-1510915933:191817..191919TCONS_00010196-exon-sc0000103-1510915933:191817..191919Clytia hemisphaericaexon
TCONS_00010196-exon-sc0000103-1510915933:180836..181035TCONS_00010196-exon-sc0000103-1510915933:180836..181035Clytia hemisphaericaexon
TCONS_00010196-exon-sc0000103-1491911889:195833..196076TCONS_00010196-exon-sc0000103-1491911889:195833..196076Clytia hemisphaericaexon
TCONS_00010196-exon-sc0000103-1491911889:195025..195189TCONS_00010196-exon-sc0000103-1491911889:195025..195189Clytia hemisphaericaexon
TCONS_00010196-exon-sc0000103-1491911889:193542..193816TCONS_00010196-exon-sc0000103-1491911889:193542..193816Clytia hemisphaericaexon
TCONS_00010196-exon-sc0000103-1491911889:193125..193238TCONS_00010196-exon-sc0000103-1491911889:193125..193238Clytia hemisphaericaexon
TCONS_00010196-exon-sc0000103-1491911889:192309..192467TCONS_00010196-exon-sc0000103-1491911889:192309..192467Clytia hemisphaericaexon
TCONS_00010196-exon-sc0000103-1491911889:191817..191919TCONS_00010196-exon-sc0000103-1491911889:191817..191919Clytia hemisphaericaexon
TCONS_00010196-exon-sc0000103-1491911889:180836..181035TCONS_00010196-exon-sc0000103-1491911889:180836..181035Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000103supercontigsc0000103:180836..196076 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.04297	7.41434	3.49866	1.78965	0	0	0.0814085	0	0.953461	0.392632	1.08138	1.68033	3.16575	3.02359	2.28239	3.10901	1.76577	2.46031	0.483728	0.823364	0	0	1.66632	1.37349	1.07454	4.8609	2.37096	1.76001	3.06955	3.41186
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR010483Alpha_2_MRAP_C
IPR009066MG_RAP_rcpt_1
Vocabulary: Molecular Function
TermDefinition
GO:0008201heparin binding
GO:0050750low-density lipoprotein particle receptor binding
Vocabulary: Cellular Component
TermDefinition
GO:0005783endoplasmic reticulum
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005783 endoplasmic reticulum
molecular_function GO:0008201 heparin binding
molecular_function GO:0050750 low-density lipoprotein particle receptor binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00010196 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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