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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00010217 ID=TCONS_00010217|Name=TCONS_00010217|organism=Clytia hemisphaerica|type=transcript|length=1313bp
AAGTTTCGTGTATTACTTACACAAAACATTCTATTTGTTTTTTCATCACA
ACAAACGCATGCTGCTCGTTAGCCATCTTTTGTTGTAGACTGGACTGGAT
CGATAGAAGATTGATaacgtttttttttgtctttctatTATTTCAACAGG
TTATGCTGGACTTTCACAGCCTTTTTTCCTCTTCTTAGCTCAGAAAATTG
CATTTGATCGCAGCACTGGCAGACAGGAAAAACCCGCAACTTTTGGCCTN
CTTAGCTCAGAAAATTGCATTTGATCGCAGGACTGGCAGACTGGAAAAAC
CCGCAACTTTACTTTAGGATGGCGTTGTCAGTCAGACTCTGCAATATTGT
CAAATTTCGCAGCTTTTCTGCTGTCAAATTTGACAGTGCTTGCCTTTAAA
TCTAGAGCAGGGTTGTAGGGTGATGAATAgggttttgaaattatttgcaT
TTTTTAGAACCATCCAAAAGTAAAACTTTTCACTCTAGGATTTTGATTTC
ACATACAAATCAGTCTTGAAAGTTTTAGGTAGGTCAtaggccatcgaaaa
attgttctgtttgcgtcgcaacaggtgttaaaaatgcatgcgggcagATG
GGCGGTCGGAAAATTACCGggttttttaaaaatcgctTCTGTAAGTCAGG
GGCAGGTGGTGACACGAACAGaacaatgggctattccattttaaaaaacc
atacaggccAGTTTTCACATCAAATCATGGCAGATTTCGTCGAGATGTCG
GGGGCAGCAACTTTCCGGGGGCCAGGGGCAGAAAAAGTTGTATCATCAGT
GCCCTCAGGGGCAGAAATGCTTCTTACCAAGGGTAGAAAGTGCAAGATTC
CAAGGCCAACAAGGGCAGCATCTAcaaaccagacccgatcaatcgaactt
atcgaaccaatcaaacaatcgaactaatcgaactccatcgaacaattaaa
gttcgattaaaaaaatgaatcgaactctaagattttttaaaagattgtgg
agtgttcgattaagttcgatcaatgggtctcggttcgatcagttagataa
accaattttgttcgacaagtttgtgctgctccgccaccattagcttcttt
tcaaagccaaattcggaatgtaaatcgggaaattacttccgataacggat
tacacactttttcctgtatccttttagcgccggaggcggtttgttggggc
aTAGTATTCCGTCACTCGGCCGTgcgcgaaatcgcaacagaggggctacg
gactttattccagatagacaaatatccataggggatagtttgttatccaa
agtttccaggggg Run BLAST on NCBI transcript from alignment at sc0000103:113483..114795 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00010217 ID=TCONS_00010217|Name=TCONS_00010217|organism=Clytia hemisphaerica|type=transcript|length=1313bp|location=Sequence derived from alignment at sc0000103:113483..114795 (Clytia hemisphaerica)
ccccctggaaactttggataacaaactatcccctatggatatttgtctat
ctggaataaagtccgtagcccctctgttgcgatttcgcgcACGGCCGAGT
GACGGAATACTAtgccccaacaaaccgcctccggcgctaaaaggatacag
gaaaaagtgtgtaatccgttatcggaagtaatttcccgatttacattccg
aatttggctttgaaaagaagctaatggtggcggagcagcacaaacttgtc
gaacaaaattggtttatctaactgatcgaaccgagacccattgatcgaac
ttaatcgaacactccacaatcttttaaaaaatcttagagttcgattcatt
tttttaatcgaactttaattgttcgatggagttcgattagttcgattgtt
tgattggttcgataagttcgattgatcgggtctggtttgTAGATGCTGCC
CTTGTTGGCCTTGGAATCTTGCACTTTCTACCCTTGGTAAGAAGCATTTC
TGCCCCTGAGGGCACTGATGATACAACTTTTTCTGCCCCTGGCCCCCGGA
AAGTTGCTGCCCCCGACATCTCGACGAAATCTGCCATGATTTGATGTGAA
AACTggcctgtatggttttttaaaatggaatagcccattgttCTGTTCGT
GTCACCACCTGCCCCTGACTTACAGAagcgatttttaaaaaaccCGGTAA
TTTTCCGACCGCCCATctgcccgcatgcatttttaacacctgttgcgacg
caaacagaacaatttttcgatggcctaTGACCTACCTAAAACTTTCAAGA
CTGATTTGTATGTGAAATCAAAATCCTAGAGTGAAAAGTTTTACTTTTGG
ATGGTTCTAAAAAAtgcaaataatttcaaaacccTATTCATCACCCTACA
ACCCTGCTCTAGATTTAAAGGCAAGCACTGTCAAATTTGACAGCAGAAAA
GCTGCGAAATTTGACAATATTGCAGAGTCTGACTGACAACGCCATCCTAA
AGTAAAGTTGCGGGTTTTTCCAGTCTGCCAGTCCTGCGATCAAATGCAAT
TTTCTGAGCTAAGNAGGCCAAAAGTTGCGGGTTTTTCCTGTCTGCCAGTG
CTGCGATCAAATGCAATTTTCTGAGCTAAGAAGAGGAAAAAAGGCTGTGA
AAGTCCAGCATAACCTGTTGAAATAatagaaagacaaaaaaaaacgttAT
CAATCTTCTATCGATCCAGTCCAGTCTACAACAAAAGATGGCTAACGAGC
AGCATGCGTTTGTTGTGATGAAAAAACAAATAGAATGTTTTGTGTAAGTA
ATACACGAAACTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00010217-exon-sc0000103-1491911889:113483..114795 | TCONS_00010217-exon-sc0000103-1491911889:113483..114795 | Clytia hemisphaerica | exon |
| TCONS_00010217-exon-sc0000103-1510915933:113483..114795 | TCONS_00010217-exon-sc0000103-1510915933:113483..114795 | Clytia hemisphaerica | exon |
| TCONS_00010217-exon-sc0000103-1575043694:113483..114795 | TCONS_00010217-exon-sc0000103-1575043694:113483..114795 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000103 | supercontig | sc0000103:113483..114795 . |
Blast
The following BLAST results are available for this feature:
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