TCONS_00010230 (transcript) - C. hemisphaerica

Overview
NameTCONS_00010230
Unique NameTCONS_00010230
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length151

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00010230 ID=TCONS_00010230|Name=TCONS_00010230|organism=Clytia hemisphaerica|type=transcript|length=151bp
ATTTTCATGGAACACTATTTACAACGTTTTTATCTACGGTTATCTTCTGT
TGTCACTTTTTCTAGTATATAGTTTTTCATAGATACATAGTGTCATATTG
ACTCTGCCATTTTTATATCCCCTCTCCCTTACCCTAGCCAACCCCTAATA
A
Run BLAST on NCBI

transcript from alignment at sc0000103:400599..400749

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00010230 ID=TCONS_00010230|Name=TCONS_00010230|organism=Clytia hemisphaerica|type=transcript|length=151bp|location=Sequence derived from alignment at sc0000103:400599..400749 (Clytia hemisphaerica)
TTATTAGGGGTTGGCTAGGGTAAGGGAGAGGGGATATAAAAATGGCAGAG
TCAATATGACACTATGTATCTATGAAAAACTATATACTAGAAAAAGTGAC
AACAGAAGATAACCGTAGATAAAAACGTTGTAAATAGTGTTCCATGAAAA
T
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005748XLOC_005748Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00010230-exon-sc0000103-1491911889:400599..400749TCONS_00010230-exon-sc0000103-1491911889:400599..400749Clytia hemisphaericaexon
TCONS_00010230-exon-sc0000103-1510915933:400599..400749TCONS_00010230-exon-sc0000103-1510915933:400599..400749Clytia hemisphaericaexon
TCONS_00010230-exon-sc0000103-1575043694:400599..400749TCONS_00010230-exon-sc0000103-1575043694:400599..400749Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000103supercontigsc0000103:400599..400749 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00010230 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top