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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00010265 ID=TCONS_00010265|Name=TCONS_00010265|organism=Clytia hemisphaerica|type=transcript|length=1310bp
CttttagcaaaaataaaaaagattgaataaatatttaaaaagaatgTTGA
GCATACAAGACGTATTACGACCAAACATTATCAACATCAATGGACGTCGT
TATCGACAGCTTCCAATCAAATCATTGAACAATGAGCAGCAAAGTGATTA
CACAGAAAATCTGGCTTCCTATGTCGAAGAAGaCACGTATTATGACGAAC
CGAACACTTGCTCAAACCAACCAGAATGGCAAGTCGAACAGACACACAAC
GGTTATGAAATTGTCATTGAAGACTTACCCATGTTTTATTACAAATTCAT
AATTGGTAAAGGTGGAAGCAAGAAGAAAGAGATTGAACGTTCTAGTAATG
CATCTATTAAACTACCACCAAAAGGAAGCCAAGGAAATGTGATAATCAGC
GGACGTCACAAATGTGATGTAGTGAGCGGACGTAATCAACTTCAAACAAT
CATTGATTTACACCGTACAGAACAACCTGCAACACATTTCCTTTGTATCG
CCCTTGACGCTGACCACATGGATGAGAAGTTTGCAGACTTCAAAGAAAAA
GTCCTCGAACTAAACGCACGAGGTGTTGATGGCAGTATATTTCAAGAGGC
TAAAAGATTACATTTAACACTCTCCTTGACACCTTTCCTGAATGATGCAG
AAGTGaacgAATTGCTACCAACTATCAGTGATACCGTCAATCAAATAAAA
CAaCAGTATCTACCTGAAGAATTGGTTAAAATACATTTACGAGGGATCGA
ATACATGAACGATGACCCTGGTGAAGTAGATGTGCTTTACGCAAAAGTCA
GTTTGCCTGATAGTTCAAACAGaCTTCAAAAGTTCGTGGACGAGGTCGTG
GATGCACTCTCTACAAATGGGTTGGTTAAAAAACAATACGATCACGTCAA
ACTCCACGCTACCATCATGAACACTTTATTTCGTGAAAACAAAACACCCA
AAGAAGAACGAACGCgcaatcaaaaattcaaagaacGGGTTACTTTTGAC
GCGACCAAGATTCTTGAATTGTATGGTGATTACGTGTTTGGTGAGGTGAC
TTTCAATAAGTTGGATATCTCACTCAAAGGAAGCTACGATAAAGATGGAC
GTTACAAAAGAGTGGTGTCCATACCTCTGTTGAGCAAATCGTAACATGAA
ACAATGATTTGTCAATCAgccattccattaaatttccatacagagGGGGG
GGGGATggggacgaaccttttcaagtcaaaaaacatttcatggaaatgtg
tggatacccccttgaaaatgacaaaattagcaaataaaaccttggaaaat
ttattttcac Run BLAST on NCBI protein sequence of TCONS_00010265-protein >TCONS_00010265-protein ID=TCONS_00010265-protein|Name=TCONS_00010265-protein|organism=Clytia hemisphaerica|type=polypeptide|length=366bp
MLSIQDVLRPNIININGRRYRQLPIKSLNNEQQSDYTENLASYVEEDTYY
DEPNTCSNQPEWQVEQTHNGYEIVIEDLPMFYYKFIIGKGGSKKKEIERS
SNASIKLPPKGSQGNVIISGRHKCDVVSGRNQLQTIIDLHRTEQPATHFL
CIALDADHMDEKFADFKEKVLELNARGVDGSIFQEAKRLHLTLSLTPFLN
DAEVNELLPTISDTVNQIKQQYLPEELVKIHLRGIEYMNDDPGEVDVLYA
KVSLPDSSNRLQKFVDEVVDALSTNGLVKKQYDHVKLHATIMNTLFRENK
TPKEERTRNQKFKERVTFDATKILELYGDYVFGEVTFNKLDISLKGSYDK
DGRYKRVVSIPLLSKS Run BLAST on NCBI transcript from alignment at sc0000104:458300..466568+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00010265 ID=TCONS_00010265|Name=TCONS_00010265|organism=Clytia hemisphaerica|type=transcript|length=8269bp|location=Sequence derived from alignment at sc0000104:458300..466568+ (Clytia hemisphaerica)
CttttagcaaaaataaaaaagattgaataaatatttaaaaagaatgTTGA
GCATACAAGACGTATTACGACCAAACATTATCAACATCAATGGACGTCGT
TATCGACAGCTTCCAATCAAATCATTGAACAATGAGCAGCAAAGTGATTA
CACAGAAAATCTGGCTTCCTATGTCGAAGAAGGTAACTTTAATAGTTTAG
TTTTCATCTCGTCGACAAATGTTCTTTGTCCGACCTTACTCCCTTTTTTA
CAAGCTCCGACAACCGAGCTTTTTTACATTCACGGAAGAagtttcagagg
gaatttaatttggcggatggtgtggttcaaatttaaaattaatgtgaaaa
tgttcaaaatagcTCCTTTTATGACCcaaattgtgaaaaattgagcaaaa
tttgataaaattttaatttggagggaatttaatttggtgggtGGCgggaa
agttttaattttttgggaacttaatttggcgaattttggccaaaaccgcc
aaatccgccaaattttcttcctttaaggcaTTTTCTTTGACTTCTTTTTT
ACTGATTATGAAATGATCAGGGCTAAGTTGCAGAAATCCAACTCATTGAA
TGTCATTCTTAGAATTTGTTTGAAGTAATTCctgcaaaatgtcattttct
aatttattttcaataattttttcatagaCACGTATTATGACGAACCGAAC
ACTTGCTCAAACCAACCAGAATGGCAAGTCGAACAGACACACAACGGTTA
TGAAATTGTCATTGAAGACTTACCCATGTTTTATTACAAATTCATAATTG
GTAAAGGTGGAAGCAAGAAGAAAGAGATTGAACGTTCTAGTAATGCATCT
ATTAAACTACCACCAAAAGGAAGCCAAGGAAATGTGAGTAAGTTTCTGAT
TCAGAATTTAAACCTTTATACCTTAAATCCTCGAgtaagcgccccgcttg
aataagcgccctgctcaaataagcgccccccttttagttaaaataatatt
ataaccGCCCCGCTcaaataagcgcccccctttgaataagcgccccctcc
AGGGAagggcgcttattcgaatttTGTTATAgattgaataagatattgag
tagatacttgtgtcttaaaaagaaagaaagcgattaagaataaaatgata
gaaattatcaattggatttttctaatttttcttttattcgtgcttttttg
aaaaatcaaccctttgaaacagctaagtttaagcagattccgaatttgtt
gatatacgaatttctgaaataaaaaaataagcgccccgctcgaataagcg
ccccccttagagcctgaaaaattaaataagcgcccgggcgcttattcgag
gatttacggtagTAACTGGTGATTAtaagtcaaaatttggattttggtaA
TTAGTTATATGCCATCATTAATTGCCGCTATTAATTGCAGTCATTCAGTA
ACTTCAAATTTccaaatattatttttgatttcaaatgagAAAACACGCCG
AGCTCTAGTGCTTTTTTTGGGTGGGATCAAAAATAGGACAACATGGGTCG
TGTCCAGTACTCTAAAAAGATTGATGTCAGTGGTACTCTGTTCGACTTTG
GACCAATTACCTGGCTTTGGACTTAAACATTCTGTGCAATTAATCCGATT
CTACTATTGATATTGCAAATTTTAAAAGTGTGAGCCTGCATCAGGGAGCA
AATGAGTCAACTTTCCAAGCATTTTTAACATTATAATGCAAATGAATGTC
TTGAGCTGAACTGCAAAGGTTTGAGTGTGGGTTAGAAAAATAAACTAGGA
GATTTCCGAGTATTTTAAGTACTGTTATGCGGTGcaaactttcatttttg
acTGATTTAGCGGGTGGATTTGAAATATGGGTGATATATATCTTCACTAT
GATGAGTGAAAGGTTTTTTAACAAGGTAAGATAatgattgttttattttt
tgttccaGTAATCAGCGGACGTCACAAATGTGATGTAGTGAGCGGACGTA
ATCAACTTCAAACAATCATTGATTTACACCGTACAGAACAACCTGCAACA
CATTTCCTTTGTATCGCCCTTGACGCTGACCACATGGATGAGAAGTTTGC
AGACTTCAAAGAAAAAGTCCTCGAACTAAACGTTTGTATTTATTTGACCT
ctatcaaaatatatttatcCTGACGCATTAACTTTGACttagtttaattt
ttaattggtcagccccggtgacccttcaaatccctttcacgatttttttc
ccgGAGGTCGTCGTCAAGACTTTCAAGTTTGAATCCGATTTCGGATTANN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNgaaaaatattttttcttggaagagaaaagaaacacataacttcat
taaaagatttgcgcataataataaaagaacactataattaaaaagaagaa
agtgaaaaacaattttttttgtttattcaataaattgaaagaagctattg
tattgtaaataaatagagggtgtaaaagaaagttttttatgattgatttt
gaggctttcttgtctggagagtttttggacctaccccggtggaggtccta
taaattaacctttgtccgtctgtccgtccgtccgttagttaccagctttt
ctcatgattggctcattagttttttctgattttttgcacaatgatgcaaa
atggcaatgcccaaaatgtgacggagcctgattttcgaaaaaaaaaattt
ttgggcaaatttgaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNagaaac
aaacgactaattttaatagatcgtcactatttgtgttctgaatgattgtt
taatggtcacgtcacgtagatatcaattataaacgtgttaaatgcacaat
ccaggtaggtccatcaaagtatcacttgttgtatGTAAGAAAGGAATGTC
AAAGTGTGGCGTAACATAAACTTAGAATCGTCATAACTTNagcattgtaa
ataaatagagggtgtaaaagaaagttttttatgattggttttgagGCTTT
CTTGTCTGGAGAGTTTTTGTATGTAAGAAAGGAACGTCAAAGTGTGGTGT
AACATAAACTTAGAAtcgccataacttttgattgcgttatcgaaactgga
cggaatttCCTAAGCAGCTTCCTCAATATAAAATGCCCCTATTCATTCAC
ATTATACTAGGTTCAACACGCCatttaaatcaatctgaatcaattgACTT
TGTGATTACTAGACAGCTAACCGTGCCCCGGGGGAGGGGNATCTGAATCA
ATTGACTATGTGATTACTAGACAGCTAACCGTGCCCCGGGGGAGGCacct
taggcaaaattgggtacggggacgtgccactTATCAGGAtttctttttta
ggctctgaagatatctgacaggttcccaaatttactaattttcaagttGT
GTATCTGATAGGgtcgattttttattattttggacaattttttaggatgg
aaaacagaaaatctttcaaattttcgtctacttttattttcaaggcgaaa
ataggaaaaattttgaatttttcgttttgacaagtgccccccccccccNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAATTTTTAGGATGGAAa
acacaaaatctttcaaattttcgtctacttttattttcagggcgaaaatg
ggaaaaattttgaatttttcgttttgacaagtgccccccccccggaaccG
TGCACACTCAACTACTCAACTATAAACGAAGGGCGGCCTTGACTggatag
aaaaaaaatcaacataaaaatgccaaaaGTGAACAAAACTGACGAAAGCC
GCAGTGAACATATTATAAAGCGGCCACCTCGGATACTTTCTCAGAGAATA
AAGAACAGGTTTAAGACATTCTAACGAAAAGATTTATGTGAAATTCCAAG
GATGAAATAATCCGATCACATCTCTGTCTGCTTTGNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNAATTCAACtttgtgttaaacttttttt
tgtctgaagttcaaccaaaatgagctttttaacctctttggctttaacat
cgaattaggtttcttgattgtacttccttctaatcgttttaagcttattg
ggctgaccttccagcgcagctggtttatttgaaTTGAAATGCTTTGTAAC
AGCCCAAGAATCTAATCGATTGTACTCTAAACTTagtgaaaaaaagaatt
gaaattttctctTTCAGGCACGAGGTGTTGATGGCAGTATATTTCAAGAG
GCTAAAAGATTACATTTAACACTCTCCTTGACACCTTTCCTGAATGATGC
AGAAGTGGTAAGTTTTGTGCTGTTCTTCTAGAAAAGAATATTGACATTGG
GACGTTCCTTCCTTGATTTTGcctaaaggttttgttttcttttgttttca
cacgcttttttatgagaatatcaggtttaaaattggccaaatcgtaggaa
taccctaagaataccctttaagaatttgataagaatacagtcatttcgTA
TTTGGTTAAAAGAAGAAACCGATTTTTTTGTTCGACTTGAATTGcaactt
tgaggcagaaatataattttgactCCTAATAATGTGTATTCTAAAGTccc
aaactctcaaattgatcatttctcgtGTTTGTATGAAAgtcaaatctaaa
aaaagtaagaataagttaagaatatttcaccctcaattttggcaatttat
ttTAAGagtacttgaccctcatccaaagtgcACTTTTTatgatatgattt
tttttcagaacgAATTGCTACCAACTATCAGTGATACCGTCAATCAAATA
AAACAGTAAGAATTTCACCTGACCAATTATTCTACTTGGATTGTTTCAGC
AAATTATCTATCTTTCATGGTTCTTCCTATTACGATACCTTAATCTATCT
TTCCTTGACAGAATTACTGCTCATTTCTAAAACACTCCTTTTCATTATCC
CCAAAACAAACTAAAAGCTAACAGTTTTGTAgtagaattatttttttctg
tagaCAGTATCTACCTGAAGAATTGGTTAAAATACATTTACGAGGGATCG
AATACATGAACGATGACCCTGGTGAAGTAGATGTGCTTTACGCAAAAGTC
AGTTTGCCTGATAGTTCAAACAGGTAGGCAAGCTTGTAACTTTGTGATCT
TCTGTTTGAGTGCTACCCAAGCGCTTCGCTTTAGCATTCAAGGCAAGCTC
TCCCTTGTATTGACAACTTAGTGTTGCCTTATTAagagaattaattttct
tcaatAAGTTTACTTTTCTTTGTACTTGCATAAAATGGTTTCCTTTTTCC
TGGCCCCTGGCAGATCCTTCTGTGGAAATTTGTCACTTATATCTCTGCTT
TCTTACGGGTTTGAATTGTGATGAGACAAACTTTAAGAATAAgataaaaa
ttgatatgataGATATTGAAACTTGTTGGTACTTGCTTTCTTTAATATAA
TTCTCGTGTTTGGAAAATTGGGTCGGTAGCGAGTGTTTCCCAAGGCGGGA
ATCGATCTTAACTTCAGCATTTCACATTTGTAATAatcttgttttctttt
cagaCTTCAAAAGTTCGTGGACGAGGTCGTGGATGCACTCTCTACAAATG
GGTTGGTTAAAAAACAATACGATCACGTCAAACTCCACGCTACCATCATG
AACACTTTATTTCGTGAAAACAAAACACCCAAAGAAGAACGAACGCgcaa
tcaaaaattcaaagaacGGGTTACTTTTGACGCGACCAAGATTCTTGAAG
TAAGCCTATCTTCTGCAATTCTGTTGATTCGATTGTGTTGCTTTTGTGAT
CTTGATTTGTATAGGTGTGCTGAAGAATTTTCCGTTTCGATGGGACGAGC
TGAGCAGTAAATTTTATCATAAAACAATAATTTGATTGCATTTCTTGTTA
AGAAAAAAGCCTTTCAGGTTTGCTAAGATAGTTCTAACCATCATTTTGAT
CTACTAGTATTTGGGATAGGCACACAGACAGATTGTCCGATTAAATTTAG
TTTTAACatctttgtttttcttgctAGTTGTATGGTGATTACGTGTTTGG
TGAGGTGACTTTCAATAAGTTGGATATCTCACTCAAAGGAAGCTACGATA
AAGATGGACGTTACAAAAGAGTGGTGTCCATACCTCTGTTGAGCAAATCG
TAACATGAAACAATGATTTGTCAATCAgccattccattaaatttccatac
agagGGGGGGGGGATggggacgaaccttttcaagtcaaaaaacatttcat
ggaaatgtgtggatacccccttgaaaatgacaaaattagcaaataaaacc
ttggaaaatttattttcac Coding sequence (CDS) from alignment at sc0000104:458300..466568+ >TCONS_00010265 ID=TCONS_00010265|Name=TCONS_00010265|organism=Clytia hemisphaerica|type=CDS|length=8808bp|location=Sequence derived from alignment at sc0000104:458300..466568+ (Clytia hemisphaerica)
atgTTGAGCATACAAGACGTATTACGACCAAACATTATCAACATCAATGG
ACGTCGTTATCGACAGCTTCCAATCAAATCATTGAACAATGAGCAGCAAA
GTGATTACACAGAAAATCTGGCTTCCTATGTCGAAGAAGaCACGTATTAT
GACGAACCGAACACTTGCTCAAACCAACCAGAATGGCAAGTCGAACAGAC
ACACAACGGTTATGAAATTGTCATTGAAGACTTACCCATGTTTTATTACA
AATTCATAATTGGTAAAGGTGGAAGCAAGAAGAAAGAGATTGAACGTTCT
AGTAATGCATCTATTAAACTACCACCAAAAGGAAGCCAAGGAAATGTGAT
AATCAGCGGACGTCACAAATGTGATGTAGTGAGCGGACGTAATCAACTTC
AAACAATCATTGATTTACACCGTACAGAACAACCTGCAACACATTTCCTT
TGTATCGCCCTTGACGCTGACCACATGGATGAGAAGTTTGCAGACTTCAA
AGAAAAAGTCCTCGAACTAAACGCACGAGGTGTTGATGGCAGTATATTTC
AAGAGGCTAAAAGATTACATTTAACACTCTCCTTGACACCTTTCCTGAAT
GATGCAGAAGTGaacgAATTGCTACCAACTATCAGTGATACCGTCAATCA
AATAAAACAaCAGTATCTACCTGAAGAATTGGTTAAAATACATTTACGAG
GGATCGAATACATGAACGATGACCCTGGTGAAGTAGATGTGCTTTACGCA
AAAGTCAGTTTGCCTGATAGTTCAAACAGaCTTCAAAAGTTCGTGGACGA
GGTCGTGGATGCACTCTCTACAAATGGGTTGGTTAAAAAACAATACGATC
ACGTCAAACTCCACGCTACCATCATGAACACTTTATTTCGTGAAAACAAA
ACACCCAAAGAAGAACGAACGCgcaatcaaaaattcaaagaacGGGTTAC
TTTTGACGCGACCAAGATTCTTGAATTGTATGGTGATTACGTGTTTGGTG
AGGTGACTTTCAATAAGTTGGATATCTCACTCAAAGGAAGCTACGATAAA
GATGGACGTTACAAAAGAGTGGTGTCCATACCTCTGTTGAGCAAATCGTA
AatgTTGAGCATACAAGACGTATTACGACCAAACATTATCAACATCAATG
GACGTCGTTATCGACAGCTTCCAATCAAATCATTGAACAATGAGCAGCAA
AGTGATTACACAGAAAATCTGGCTTCCTATGTCGAAGAAGaCACGTATTA
TGACGAACCGAACACTTGCTCAAACCAACCAGAATGGCAAGTCGAACAGA
CACACAACGGTTATGAAATTGTCATTGAAGACTTACCCATGTTTTATTAC
AAATTCATAATTGGTAAAGGTGGAAGCAAGAAGAAAGAGATTGAACGTTC
TAGTAATGCATCTATTAAACTACCACCAAAAGGAAGCCAAGGAAATGTGA
TAATCAGCGGACGTCACAAATGTGATGTAGTGAGCGGACGTAATCAACTT
CAAACAATCATTGATTTACACCGTACAGAACAACCTGCAACACATTTCCT
TTGTATCGCCCTTGACGCTGACCACATGGATGAGAAGTTTGCAGACTTCA
AAGAAAAAGTCCTCGAACTAAACGCACGAGGTGTTGATGGCAGTATATTT
CAAGAGGCTAAAAGATTACATTTAACACTCTCCTTGACACCTTTCCTGAA
TGATGCAGAAGTGaacgAATTGCTACCAACTATCAGTGATACCGTCAATC
AAATAAAACAaCAGTATCTACCTGAAGAATTGGTTAAAATACATTTACGA
GGGATCGAATACATGAACGATGACCCTGGTGAAGTAGATGTGCTTTACGC
AAAAGTCAGTTTGCCTGATAGTTCAAACAGaCTTCAAAAGTTCGTGGACG
AGGTCGTGGATGCACTCTCTACAAATGGGTTGGTTAAAAAACAATACGAT
CACGTCAAACTCCACGCTACCATCATGAACACTTTATTTCGTGAAAACAA
AACACCCAAAGAAGAACGAACGCgcaatcaaaaattcaaagaacGGGTTA
CTTTTGACGCGACCAAGATTCTTGAATTGTATGGTGATTACGTGTTTGGT
GAGGTGACTTTCAATAAGTTGGATATCTCACTCAAAGGAAGCTACGATAA
AGATGGACGTTACAAAAGAGTGGTGTCCATACCTCTGTTGAGCAAATCGT
AAatgTTGAGCATACAAGACGTATTACGACCAAACATTATCAACATCAAT
GGACGTCGTTATCGACAGCTTCCAATCAAATCATTGAACAATGAGCAGCA
AAGTGATTACACAGAAAATCTGGCTTCCTATGTCGAAGAAGaCACGTATT
ATGACGAACCGAACACTTGCTCAAACCAACCAGAATGGCAAGTCGAACAG
ACACACAACGGTTATGAAATTGTCATTGAAGACTTACCCATGTTTTATTA
CAAATTCATAATTGGTAAAGGTGGAAGCAAGAAGAAAGAGATTGAACGTT
CTAGTAATGCATCTATTAAACTACCACCAAAAGGAAGCCAAGGAAATGTG
ATAATCAGCGGACGTCACAAATGTGATGTAGTGAGCGGACGTAATCAACT
TCAAACAATCATTGATTTACACCGTACAGAACAACCTGCAACACATTTCC
TTTGTATCGCCCTTGACGCTGACCACATGGATGAGAAGTTTGCAGACTTC
AAAGAAAAAGTCCTCGAACTAAACGCACGAGGTGTTGATGGCAGTATATT
TCAAGAGGCTAAAAGATTACATTTAACACTCTCCTTGACACCTTTCCTGA
ATGATGCAGAAGTGaacgAATTGCTACCAACTATCAGTGATACCGTCAAT
CAAATAAAACAaCAGTATCTACCTGAAGAATTGGTTAAAATACATTTACG
AGGGATCGAATACATGAACGATGACCCTGGTGAAGTAGATGTGCTTTACG
CAAAAGTCAGTTTGCCTGATAGTTCAAACAGaCTTCAAAAGTTCGTGGAC
GAGGTCGTGGATGCACTCTCTACAAATGGGTTGGTTAAAAAACAATACGA
TCACGTCAAACTCCACGCTACCATCATGAACACTTTATTTCGTGAAAACA
AAACACCCAAAGAAGAACGAACGCgcaatcaaaaattcaaagaacGGGTT
ACTTTTGACGCGACCAAGATTCTTGAATTGTATGGTGATTACGTGTTTGG
TGAGGTGACTTTCAATAAGTTGGATATCTCACTCAAAGGAAGCTACGATA
AAGATGGACGTTACAAAAGAGTGGTGTCCATACCTCTGTTGAGCAAATCG
TAAatgTTGAGCATACAAGACGTATTACGACCAAACATTATCAACATCAA
TGGACGTCGTTATCGACAGCTTCCAATCAAATCATTGAACAATGAGCAGC
AAAGTGATTACACAGAAAATCTGGCTTCCTATGTCGAAGAAGaCACGTAT
TATGACGAACCGAACACTTGCTCAAACCAACCAGAATGGCAAGTCGAACA
GACACACAACGGTTATGAAATTGTCATTGAAGACTTACCCATGTTTTATT
ACAAATTCATAATTGGTAAAGGTGGAAGCAAGAAGAAAGAGATTGAACGT
TCTAGTAATGCATCTATTAAACTACCACCAAAAGGAAGCCAAGGAAATGT
GATAATCAGCGGACGTCACAAATGTGATGTAGTGAGCGGACGTAATCAAC
TTCAAACAATCATTGATTTACACCGTACAGAACAACCTGCAACACATTTC
CTTTGTATCGCCCTTGACGCTGACCACATGGATGAGAAGTTTGCAGACTT
CAAAGAAAAAGTCCTCGAACTAAACGCACGAGGTGTTGATGGCAGTATAT
TTCAAGAGGCTAAAAGATTACATTTAACACTCTCCTTGACACCTTTCCTG
AATGATGCAGAAGTGaacgAATTGCTACCAACTATCAGTGATACCGTCAA
TCAAATAAAACAaCAGTATCTACCTGAAGAATTGGTTAAAATACATTTAC
GAGGGATCGAATACATGAACGATGACCCTGGTGAAGTAGATGTGCTTTAC
GCAAAAGTCAGTTTGCCTGATAGTTCAAACAGaCTTCAAAAGTTCGTGGA
CGAGGTCGTGGATGCACTCTCTACAAATGGGTTGGTTAAAAAACAATACG
ATCACGTCAAACTCCACGCTACCATCATGAACACTTTATTTCGTGAAAAC
AAAACACCCAAAGAAGAACGAACGCgcaatcaaaaattcaaagaacGGGT
TACTTTTGACGCGACCAAGATTCTTGAATTGTATGGTGATTACGTGTTTG
GTGAGGTGACTTTCAATAAGTTGGATATCTCACTCAAAGGAAGCTACGAT
AAAGATGGACGTTACAAAAGAGTGGTGTCCATACCTCTGTTGAGCAAATC
GTAAatgTTGAGCATACAAGACGTATTACGACCAAACATTATCAACATCA
ATGGACGTCGTTATCGACAGCTTCCAATCAAATCATTGAACAATGAGCAG
CAAAGTGATTACACAGAAAATCTGGCTTCCTATGTCGAAGAAGaCACGTA
TTATGACGAACCGAACACTTGCTCAAACCAACCAGAATGGCAAGTCGAAC
AGACACACAACGGTTATGAAATTGTCATTGAAGACTTACCCATGTTTTAT
TACAAATTCATAATTGGTAAAGGTGGAAGCAAGAAGAAAGAGATTGAACG
TTCTAGTAATGCATCTATTAAACTACCACCAAAAGGAAGCCAAGGAAATG
TGATAATCAGCGGACGTCACAAATGTGATGTAGTGAGCGGACGTAATCAA
CTTCAAACAATCATTGATTTACACCGTACAGAACAACCTGCAACACATTT
CCTTTGTATCGCCCTTGACGCTGACCACATGGATGAGAAGTTTGCAGACT
TCAAAGAAAAAGTCCTCGAACTAAACGCACGAGGTGTTGATGGCAGTATA
TTTCAAGAGGCTAAAAGATTACATTTAACACTCTCCTTGACACCTTTCCT
GAATGATGCAGAAGTGaacgAATTGCTACCAACTATCAGTGATACCGTCA
ATCAAATAAAACAaCAGTATCTACCTGAAGAATTGGTTAAAATACATTTA
CGAGGGATCGAATACATGAACGATGACCCTGGTGAAGTAGATGTGCTTTA
CGCAAAAGTCAGTTTGCCTGATAGTTCAAACAGaCTTCAAAAGTTCGTGG
ACGAGGTCGTGGATGCACTCTCTACAAATGGGTTGGTTAAAAAACAATAC
GATCACGTCAAACTCCACGCTACCATCATGAACACTTTATTTCGTGAAAA
CAAAACACCCAAAGAAGAACGAACGCgcaatcaaaaattcaaagaacGGG
TTACTTTTGACGCGACCAAGATTCTTGAATTGTATGGTGATTACGTGTTT
GGTGAGGTGACTTTCAATAAGTTGGATATCTCACTCAAAGGAAGCTACGA
TAAAGATGGACGTTACAAAAGAGTGGTGTCCATACCTCTGTTGAGCAAAT
CGTAAatgTTGAGCATACAAGACGTATTACGACCAAACATTATCAACATC
AATGGACGTCGTTATCGACAGCTTCCAATCAAATCATTGAACAATGAGCA
GCAAAGTGATTACACAGAAAATCTGGCTTCCTATGTCGAAGAAGaCACGT
ATTATGACGAACCGAACACTTGCTCAAACCAACCAGAATGGCAAGTCGAA
CAGACACACAACGGTTATGAAATTGTCATTGAAGACTTACCCATGTTTTA
TTACAAATTCATAATTGGTAAAGGTGGAAGCAAGAAGAAAGAGATTGAAC
GTTCTAGTAATGCATCTATTAAACTACCACCAAAAGGAAGCCAAGGAAAT
GTGATAATCAGCGGACGTCACAAATGTGATGTAGTGAGCGGACGTAATCA
ACTTCAAACAATCATTGATTTACACCGTACAGAACAACCTGCAACACATT
TCCTTTGTATCGCCCTTGACGCTGACCACATGGATGAGAAGTTTGCAGAC
TTCAAAGAAAAAGTCCTCGAACTAAACGCACGAGGTGTTGATGGCAGTAT
ATTTCAAGAGGCTAAAAGATTACATTTAACACTCTCCTTGACACCTTTCC
TGAATGATGCAGAAGTGaacgAATTGCTACCAACTATCAGTGATACCGTC
AATCAAATAAAACAaCAGTATCTACCTGAAGAATTGGTTAAAATACATTT
ACGAGGGATCGAATACATGAACGATGACCCTGGTGAAGTAGATGTGCTTT
ACGCAAAAGTCAGTTTGCCTGATAGTTCAAACAGaCTTCAAAAGTTCGTG
GACGAGGTCGTGGATGCACTCTCTACAAATGGGTTGGTTAAAAAACAATA
CGATCACGTCAAACTCCACGCTACCATCATGAACACTTTATTTCGTGAAA
ACAAAACACCCAAAGAAGAACGAACGCgcaatcaaaaattcaaagaacGG
GTTACTTTTGACGCGACCAAGATTCTTGAATTGTATGGTGATTACGTGTT
TGGTGAGGTGACTTTCAATAAGTTGGATATCTCACTCAAAGGAAGCTACG
ATAAAGATGGACGTTACAAAAGAGTGGTGTCCATACCTCTGTTGAGCAAA
TCGTAAatgTTGAGCATACAAGACGTATTACGACCAAACATTATCAACAT
CAATGGACGTCGTTATCGACAGCTTCCAATCAAATCATTGAACAATGAGC
AGCAAAGTGATTACACAGAAAATCTGGCTTCCTATGTCGAAGAAGaCACG
TATTATGACGAACCGAACACTTGCTCAAACCAACCAGAATGGCAAGTCGA
ACAGACACACAACGGTTATGAAATTGTCATTGAAGACTTACCCATGTTTT
ATTACAAATTCATAATTGGTAAAGGTGGAAGCAAGAAGAAAGAGATTGAA
CGTTCTAGTAATGCATCTATTAAACTACCACCAAAAGGAAGCCAAGGAAA
TGTGATAATCAGCGGACGTCACAAATGTGATGTAGTGAGCGGACGTAATC
AACTTCAAACAATCATTGATTTACACCGTACAGAACAACCTGCAACACAT
TTCCTTTGTATCGCCCTTGACGCTGACCACATGGATGAGAAGTTTGCAGA
CTTCAAAGAAAAAGTCCTCGAACTAAACGCACGAGGTGTTGATGGCAGTA
TATTTCAAGAGGCTAAAAGATTACATTTAACACTCTCCTTGACACCTTTC
CTGAATGATGCAGAAGTGaacgAATTGCTACCAACTATCAGTGATACCGT
CAATCAAATAAAACAaCAGTATCTACCTGAAGAATTGGTTAAAATACATT
TACGAGGGATCGAATACATGAACGATGACCCTGGTGAAGTAGATGTGCTT
TACGCAAAAGTCAGTTTGCCTGATAGTTCAAACAGaCTTCAAAAGTTCGT
GGACGAGGTCGTGGATGCACTCTCTACAAATGGGTTGGTTAAAAAACAAT
ACGATCACGTCAAACTCCACGCTACCATCATGAACACTTTATTTCGTGAA
AACAAAACACCCAAAGAAGAACGAACGCgcaatcaaaaattcaaagaacG
GGTTACTTTTGACGCGACCAAGATTCTTGAATTGTATGGTGATTACGTGT
TTGGTGAGGTGACTTTCAATAAGTTGGATATCTCACTCAAAGGAAGCTAC
GATAAAGATGGACGTTACAAAAGAGTGGTGTCCATACCTCTGTTGAGCAA
ATCGTAAatgTTGAGCATACAAGACGTATTACGACCAAACATTATCAACA
TCAATGGACGTCGTTATCGACAGCTTCCAATCAAATCATTGAACAATGAG
CAGCAAAGTGATTACACAGAAAATCTGGCTTCCTATGTCGAAGAAGaCAC
GTATTATGACGAACCGAACACTTGCTCAAACCAACCAGAATGGCAAGTCG
AACAGACACACAACGGTTATGAAATTGTCATTGAAGACTTACCCATGTTT
TATTACAAATTCATAATTGGTAAAGGTGGAAGCAAGAAGAAAGAGATTGA
ACGTTCTAGTAATGCATCTATTAAACTACCACCAAAAGGAAGCCAAGGAA
ATGTGATAATCAGCGGACGTCACAAATGTGATGTAGTGAGCGGACGTAAT
CAACTTCAAACAATCATTGATTTACACCGTACAGAACAACCTGCAACACA
TTTCCTTTGTATCGCCCTTGACGCTGACCACATGGATGAGAAGTTTGCAG
ACTTCAAAGAAAAAGTCCTCGAACTAAACGCACGAGGTGTTGATGGCAGT
ATATTTCAAGAGGCTAAAAGATTACATTTAACACTCTCCTTGACACCTTT
CCTGAATGATGCAGAAGTGaacgAATTGCTACCAACTATCAGTGATACCG
TCAATCAAATAAAACAaCAGTATCTACCTGAAGAATTGGTTAAAATACAT
TTACGAGGGATCGAATACATGAACGATGACCCTGGTGAAGTAGATGTGCT
TTACGCAAAAGTCAGTTTGCCTGATAGTTCAAACAGaCTTCAAAAGTTCG
TGGACGAGGTCGTGGATGCACTCTCTACAAATGGGTTGGTTAAAAAACAA
TACGATCACGTCAAACTCCACGCTACCATCATGAACACTTTATTTCGTGA
AAACAAAACACCCAAAGAAGAACGAACGCgcaatcaaaaattcaaagaac
GGGTTACTTTTGACGCGACCAAGATTCTTGAATTGTATGGTGATTACGTG
TTTGGTGAGGTGACTTTCAATAAGTTGGATATCTCACTCAAAGGAAGCTA
CGATAAAGATGGACGTTACAAAAGAGTGGTGTCCATACCTCTGTTGAGCA
AATCGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00010265-exon-sc0000104-1491911889:458300..458481 | TCONS_00010265-exon-sc0000104-1491911889:458300..458481 | Clytia hemisphaerica | exon |
| TCONS_00010265-exon-sc0000104-1510915933:458300..458481 | TCONS_00010265-exon-sc0000104-1510915933:458300..458481 | Clytia hemisphaerica | exon |
| TCONS_00010265-exon-sc0000104-1575043694:458300..458481 | TCONS_00010265-exon-sc0000104-1575043694:458300..458481 | Clytia hemisphaerica | exon |
| TCONS_00010265-exon-sc0000104-1491911889:458977..459186 | TCONS_00010265-exon-sc0000104-1491911889:458977..459186 | Clytia hemisphaerica | exon |
| TCONS_00010265-exon-sc0000104-1510915933:458977..459186 | TCONS_00010265-exon-sc0000104-1510915933:458977..459186 | Clytia hemisphaerica | exon |
| TCONS_00010265-exon-sc0000104-1575043694:458977..459186 | TCONS_00010265-exon-sc0000104-1575043694:458977..459186 | Clytia hemisphaerica | exon |
| TCONS_00010265-exon-sc0000104-1491911889:460258..460430 | TCONS_00010265-exon-sc0000104-1491911889:460258..460430 | Clytia hemisphaerica | exon |
| TCONS_00010265-exon-sc0000104-1510915933:460258..460430 | TCONS_00010265-exon-sc0000104-1510915933:460258..460430 | Clytia hemisphaerica | exon |
| TCONS_00010265-exon-sc0000104-1575043694:460258..460430 | TCONS_00010265-exon-sc0000104-1575043694:460258..460430 | Clytia hemisphaerica | exon |
| TCONS_00010265-exon-sc0000104-1491911889:464467..464556 | TCONS_00010265-exon-sc0000104-1491911889:464467..464556 | Clytia hemisphaerica | exon |
| TCONS_00010265-exon-sc0000104-1510915933:464467..464556 | TCONS_00010265-exon-sc0000104-1510915933:464467..464556 | Clytia hemisphaerica | exon |
| TCONS_00010265-exon-sc0000104-1575043694:464467..464556 | TCONS_00010265-exon-sc0000104-1575043694:464467..464556 | Clytia hemisphaerica | exon |
| TCONS_00010265-exon-sc0000104-1491911889:465008..465054 | TCONS_00010265-exon-sc0000104-1491911889:465008..465054 | Clytia hemisphaerica | exon |
| TCONS_00010265-exon-sc0000104-1510915933:465008..465054 | TCONS_00010265-exon-sc0000104-1510915933:465008..465054 | Clytia hemisphaerica | exon |
| TCONS_00010265-exon-sc0000104-1575043694:465008..465054 | TCONS_00010265-exon-sc0000104-1575043694:465008..465054 | Clytia hemisphaerica | exon |
| TCONS_00010265-exon-sc0000104-1491911889:465253..465372 | TCONS_00010265-exon-sc0000104-1491911889:465253..465372 | Clytia hemisphaerica | exon |
| TCONS_00010265-exon-sc0000104-1510915933:465253..465372 | TCONS_00010265-exon-sc0000104-1510915933:465253..465372 | Clytia hemisphaerica | exon |
| TCONS_00010265-exon-sc0000104-1575043694:465253..465372 | TCONS_00010265-exon-sc0000104-1575043694:465253..465372 | Clytia hemisphaerica | exon |
| TCONS_00010265-exon-sc0000104-1491911889:465803..465998 | TCONS_00010265-exon-sc0000104-1491911889:465803..465998 | Clytia hemisphaerica | exon |
| TCONS_00010265-exon-sc0000104-1510915933:465803..465998 | TCONS_00010265-exon-sc0000104-1510915933:465803..465998 | Clytia hemisphaerica | exon |
| TCONS_00010265-exon-sc0000104-1575043694:465803..465998 | TCONS_00010265-exon-sc0000104-1575043694:465803..465998 | Clytia hemisphaerica | exon |
| TCONS_00010265-exon-sc0000104-1491911889:466277..466568 | TCONS_00010265-exon-sc0000104-1491911889:466277..466568 | Clytia hemisphaerica | exon |
| TCONS_00010265-exon-sc0000104-1510915933:466277..466568 | TCONS_00010265-exon-sc0000104-1510915933:466277..466568 | Clytia hemisphaerica | exon |
| TCONS_00010265-exon-sc0000104-1575043694:466277..466568 | TCONS_00010265-exon-sc0000104-1575043694:466277..466568 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000104 | supercontig | sc0000104:458300..466568 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
| GO:0003723 | RNA binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0003676 |
nucleic acid binding |
| molecular_function |
GO:0003723 |
RNA binding |
Blast
BLAST of TCONS_00010265 vs. Swiss-Prot (Human)
Match: ASCC1 (Activating signal cointegrator 1 complex subunit 1 OS=Homo sapiens GN=ASCC1 PE=1 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 5.487e-57 Identity = 132/406 (32.51%), Postives = 211/406 (51.97%), Query Frame = 2
Query: 59 DVLRPNIININGRRYRQLPIKSLNNEQQSDYTENLASYVEEDTYYDEPNTCSNQP--EWQVEQTHNGYEIVIEDLPMFY---------------------------YKFXXXXXXXXXXXXXXXXNASIKLPPKGSQGNVIISGRHKCDVVSGRNQLQTIIDLHRTEQPATHFLCIALDADHMDEKFADFKEKVLELNA--RGVDGSIFQEAKRLHLTLSLTPFLNDAEVNELLPTISDTVNQIKQQYLPE----ELVKIHLRGIEYMNDDPGEVDVLYAKVSLPDSSNRLQKFVDEVVDALSTNGLVKKQYDHVKLHATIMNTLFRENKTPKEERTRNQK-------FKERVTFDATKILELYG---DYVFGEVTFNKLDISLKGSYDKDGRYKRVVSIPLLSKS 1141
+VLRP +I I+GR YR+ P++ + + D E+ +Y C+++P ++VEQT G+ + + Y + I+GK G +K+IE + SI +P G G ++I+G+H+ V+S R ++ ++D R +QP THFL L+ + E F F+E+VL + GVD SIFQ K+LHLT+ + L++ E+ + + + Q K++++ + + +++ + GIEYMNDDPG VDVLYAKV + D SNRLQ+ VD V++ +GL+ K+++ VKLHAT+MNTLFR K P E N FKER +FD IL+ + + + ++ L GS D +V I +S +
Sbjct: 2 EVLRPQLIRIDGRNYRKNPVQEQTYQHEED----------EEDFYQGSMECADEPCDAYEVEQTPQGFRSTLRAPSLLYNLIHLNTSNDCGFQKITLDCQNIYTWKSRHIVGKRGDTRKKIEMETKTSISIPKPGQDGEIVITGQHRNGVISARTRIDVLLDTFRRKQPFTHFLAFFLNEVEVQEGFLRFQEEVLAKCSMDHGVDSSIFQNPKKLHLTIGMLVLLSEEEIQQ----TCEMLQQCKEEFINDISGGKPLEVEMAGIEYMNDDPGMVDVLYAKVHMKDGSNRLQELVDRVLERFQASGLIVKEWNSVKLHATVMNTLFR--KDPNAEGRYNLYTAEGKYIFKERESFDGRNILKSFALLPRLEYNDAISAHCNLCLPGSSDSPASASQVAGITGVSDA 391
The following BLAST results are available for this feature:
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