TCONS_00010298 (transcript) - C. hemisphaerica

Overview
NameTCONS_00010298
Unique NameTCONS_00010298
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2736

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00010298 ID=TCONS_00010298|Name=TCONS_00010298|organism=Clytia hemisphaerica|type=transcript|length=2736bp
CTGGGGTATGGTTTTGAAATTTGCTACGACTTTCCGAAATGAACGTGTTC
AGCAAATTTGGAGAAACACTCCACTCAGTCGATGCGCATGCGCTATTGAA
ATCAATCGGTCTTGAACAAATGATGTCAGATGCGCCAACAGACCATAAAT
ATCTAGCCTACCTTAGTGGTGGAATCCTAGCTTCGGCTGCAGTATTATTT
GTCGGTAACCGTTTGTTTCATGATCGTCTTTCCAGTTGGAACCTACCAGG
ACCGAAAAGTTCACTCCTGCCGATAGACCTGTTCAAAGGTCACAAAAACC
AACACCAACTACACTTATTGTTAGACGACTATGTGAAAACTTACGGCGAA
ACTTTCGCTTTTAATTACAAAGGACAGCCTGTTGTCGCAACGACAGACGA
GGATATCATACATAAAATATTATGGAAAGAATTCCCAAACTTTGAAAACA
GAAAGTTCTTTGTCGAGATGCCGTGGCCTTGTCAACACATGGTAACCATG
GCAAAAGGAGCAAAGGCCAAAATGATCAGAAACCTTTTGAAAGCTGTATT
AGACgccaaaagtatcaaaaataaTTGGGCTCATTTTCAAGAAGCGAACC
AGGACGTGGAAGAGCTCTTGAGGGACGCCGCGTTAAACATGCTAGAAGTT
AATTCGACAAGTTTAGCAAATGGATATATCATGCAGATCATCACCAAGAT
GGCATTTTCGCTTGATTGCTCCAACCAATCAGATCTCAACAAACAATTGG
TCCAACTATCACACCTCTTTACTAGACCTCCAACATGGCTTCAAAGCTGT
TCCAGTCTCCCAATCATTGGAAACTTGTTGAAACTTTCCCCATGGGGATT
TAACTCAAGTTTGCATCAGTTCATAAAGATTGCAACAGACATTGTTGTGG
AAAGACGCAAAGAAAAGAATCGCGAACCACAGGATGTATTGGACGTTCTG
TTAGCAGCACAATCCAAAGACTCCAACATCAGCACTGAAATTCTATTAGC
TCAGGCTATTGTTCTCCTCACTGTCGTCCACGCTTCAACCGCCACGACGA
TCTCCATAGCAACCTATTATATCGCCAAACACAAAGATGTACAAAGGAGA
CTACAACAAGAGATTGACAGTATCTCAATGGAAGATGGATTTCCATCTTG
GGAACATCTACATAAACAGTTGCCATACCTTGGACAAGTTGTCAATGAAA
CTTTACGCCTCTACCCGTCAGCCTTTATGTTGATGCGTGAATGTACAAAG
CCAACAACAGTCAATGGCATCTCCTTTGAAAAAGGTGACGGAGTTCTCAT
CCCAACCTATTCGATGCATCGAGATCCTAAAGTTTTCACTGATCCTGAAC
AATTCAATCCAGACCGGTTCGAGACCAAACCATCAAGACATTATTATCCG
TTCGGTGACGGCTACCGTATGTGTCCGGGAAAAGAAATGGCTTTGTCCGA
AATTAAAACCTACTTAGCTTCGAtgttgaaaaactttgatttgTCACTTG
TTGACGAGAACCAAGAATTATGCGTCAAATCATACATTTCAGCTCAAACC
ACAATGGCGGTGGATGAACCAATCCAAATTCGTGTACAAAAAAGACGTCA
TTAGATGTAATTTATAATGTAACCAAGGATGTCCTATATCTACCATCGgt
taaattttgcagatttttcgaATCCATGGAAACAATTGATGATCTGTTTT
CTGGATGTTATATCTCTGATCAACCTCTACACCAATACTTCATGACAAAG
AGTACGAGTTTACTTGTGTCTAATGACGGATGTTTGAAGTCATTGATGTG
TTTTAATAGATACACTCTCTTGGACCCCCCTCCCCCTGACCCACTGGaaa
gtttttccaaattttcgtccccggtagaaaaaaataccctaaaatttcag
gCCTATTTGCTTTTTTGACCgctaaaaacaaaagaattttattCCCCATT
GGCGGGAGTTCGATAGagattttatccccactgtgggaagaaTTTCTAAC
GGGGCTTAGTGACAGAGGTGTAGATACAGATATTTGACTCCGATAAGTCC
GAACACAACCTTCTTGTGAATTTCGGGTTAACTGGTATATTCGGTTAATG
AAAGACTGTATTAtagtatggcgcgccaaaaggctatttaatactaactt
tttttataataccaacttttttttataatatcaactttttttataatatc
aacttttttttttataataccaacttttttttttataaaaccaacttttt
ttttatagtaccaactttttttttagttcaaagttttttcataaCACCAA
TTTTTGTCTCGCTTACTATGCGTGTATAATCGATCAAGTGTATTaaaatg
aaagttggtattataaaaaaaaagttgatattataaaaaaagttggtatt
ataaaaaaaagctggtattataaaaaaaagttagtattaaaaagcctttt
tggcGCGCCATATTATAGCCTCACATTCGTAACAAAAGTTGTGCAGGTAT
CATAACATATCCACATTAAAACGGAGTATGGGAGGTGTTGAAGAACCAAG
AACTTTTGTATATGGTTCATTGCAGAAGAAAAAGTTGGTAATATTTTGTT
TGGTTAAATTCAAGAAGgaataaatttattttaaaaagacaattatTTCT
TCATTATGTTAATTGTAAATAATCATGCATATATATAATCTTTAATATgg
tgcttattaaaaaaacacatGAATCTTAAAATAGCA
Run BLAST on NCBI

transcript from alignment at sc0000104:175374..184108-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00010298 ID=TCONS_00010298|Name=TCONS_00010298|organism=Clytia hemisphaerica|type=transcript|length=8735bp|location=Sequence derived from alignment at sc0000104:175374..184108- (Clytia hemisphaerica)
CTGGGGTATGGTTTTGAAATTTGCTACGACTTTCCGAGTGAGTGTTTTAT
TTTGTCGATGATGCCAATCAGCGTGTATTTAAAAACCTACTAGCTTATTG
AAACTAATTTTCGCAGGAACTAATATTCATGGTCGAAAAAAAATCGGAAA
AATTGCATTTCGCGGGTTTTAATTTTCGTGGTTTTGCCCTTTTTTTGGAC
AAATTTCTTTCATTTTCCTAGGGATTTTTCAAATTTTTCGATAAAATTGG
AAAAATTGTATTTTGTGGCTTCAGATTTTGGCGGTTTTACAAAAAAACCG
TGAAAAACGCTAAACTTAATTCCCGCGAAAATTAGTTCTAATAAAGTAAT
ACTTGTTACCACTTCCGAAATCTCTCTTGAGATATTTAGAGTATAGTATT
TGCTTTTTTAAAAGGTTCGGCTTTTTAAAAGCCAGTTTGACTTCGGTTTA
AAGCCATGCTCATATTTTAAAGGATTTTCTTGACTGGTCAGCACGATCAT
TTCATTGTAAAGAAAATTTGAAATAATCCAAATTGTTTGAACGATCAAGC
TAATTGCATAACAGACCCCCCAGAGCGACTCAAACGAGCCGAAAAACTTT
TTGCTGTCTTATTTTAGTTTTTTTTGTTTAGACTCTGGCCATATTTCTAA
ACTTTTAGTATTGCTGAAATTTTGTGATGTTACGGGAAAGTTGATAAGTT
TGCGCGATTGGATTTTGAGGAAATCCACTTAAAAGAGACAAGTTTTATTC
TGTTTTTGTAATCAACCCAGATACATAAAAACGCCTTCGTCATCAGGAGA
TTGCTATTTGTGTGACAGCTCTTGTGATGAAATTGCCAGCCATGAGATTT
GATGTGAATTTAGTTCGAATGGTTGAATCAAAGAGACTTCTATTAGTAAC
TCTTAAAAAGCTAATAAAATTTAAAGATTCTAAAATTAAATGGAGTTTTG
TTGGTATTTTTGGGCTTTTTAAGATGAGTATCATGGATCTATTAGATATA
TTTTGGATTTTTGGAGTAAAGCTGAGTAACTTAGTAGTTGAATAAAGCTT
AGTTTTTTCTTTTTTATCTATAGAATGAACGTGTTCAGCAAATTTGGAGA
AACACTCCACTCAGTCGATGCGCATGCGCTATTGAAATCAATCGGTCTTG
AACAAATGATGTCAGATGCGCCAACAGACCATAAATATCTAGCCTACCTT
AGTGGTGGAATCCTAGCTTCGGCTGCAGTATTATTTGTCGGTAACCGTTT
GTTTCATGATCGTCTTTCCAGTTGGAACCTACCAGGACCGAAAAGTTCAC
TCCTGCCGATAGACCTGTTCAAAGGTCACAAAAACCAACACCAACTACAC
TTATTGTTAGACGACTATGTGAAAACTTACGGCGAAACTTTCGCTTTTAA
TTACAAAGGACAGCCTGTTGTCGCAACGACAGACGAGGATATCATACATA
AAATATTATGGAAAGAATTCCCAAACTTTGAAAACAGAAAGGTTTGTTTC
TTTACGTGAAAAATTTACCTATTCACAACTATTCGACCTCTTTTGAGTAA
AGTGCAAATAATTGGATGAAGGCCAAGAATGGACCATTCAAATGACATCG
AGGGCTTCGTTTATGTAAGGTGGTTGCCCTGTATTTTTAAATATTTGACC
CACTTCCTTGGCTTTTAATGAGAAAAATCCCTTTCACAATTTCCAGCTTA
GTGATCTTTTGGTATTGATACGCAATACGCCTTTTCTACTAAAGATCCCC
TAATTTTCTTTACCACATTTACAAGCTTAGACCATAGTCATTATAAAAAA
CACCGGTCTGGCAATGTATTGTTATAGCTTTTTGTTCAATTTTCTTTTTT
TACAAATAAAAGACAAGTTGCGATCTGCATACTTTTTGATCACGTTACCA
AAGTCTCCTCTTGGGATTGGTCTATTTTCTAATCACATGATCAAAAAGTT
TGCAAAATAAATCGATTTTGGTAAGCTCTATCTTTTAACAATAAGAAGAG
ACAAAAGCCTTCCAGACCAGTATTTTTATAATGACTATGCTTAGACGGCC
CGACACGTTTTCAATTGGGCCCTTTAATATGTATTTTGTTCACCTTACAG
TTCTTTGTCGAGATGCCGTGGCCTTGTCAACACATGGTAACCATGGCAAA
AGGAGCAAAGGCCAAAATGATCAGAAACCTTTTGAAAGCTGTATTAGACG
CCAAAAGTATCAAAAATAATTGGGCTCATTTTCAAGAAGCGAACCAGGAC
GTGGAAGAGCTCTTGAGGGACGCCGCGTTAAACATGCTAGAAGTTAATTC
GACAAGGTAAAGGCTTTTAATGAGATGTTCATTTCTTGAATACTTTTGGA
AGTCTGAGCCCGGGGTCTACCTTAATGGAAGAAATCTTCGTTGGAATGAA
CTTTTGCGGAACGAATTTTTGCGGAAATAAACTTTTGCGGAACGAATTTT
CGCGGAATTTAATTTCGCGGTTTTTTTGACAAATCCGCGAGATAAAATTT
CGCGAAACACGAATATTTTTAGGATTTAAAGTTTACCTTAAGGTAGTTAG
AATGAAGCAAGGCATTTATTTGAAAAAAAAGGGTATTGAAAAGATGTGTT
TCATGTTGGCGACTTCGTCAAATTCTCCTAATCTACTTCACTGAACCCAA
GGGCATCAAAAATCATTAAAAAAGTAGAAATTAGCCAGAATTAGACTTGG
AAGGGTTCTAGGTTCGTTGATAAACAGCCTATAAAATCTACCGCACGAAG
AATAGATTCAATCTGTCGTAAAAATGCGGCGCGAAAATTTTTTTTATCTA
AAAACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAA
GACTTAATAGTGGGAAGATTTCGTATATGATCTCCGAGGTTATTCCATTC
ATTTATGCAAAAAGGAAAGAAAGAGGCACGATAACGCTCGGTTCTACAAA
AAGGTGCCTCGAGTGGTGGTTTTATCCTTCGCCCTGCATTGCGTTCTTCC
TCTCCTCTCTGGGGAGGAAGAATATTCTTTAAGGCTTTTAAAGGCTTTTA
ATGAGACGTTCATTTCTTGAATACTTTTAGAAGTCTTAGCCCGGGGTCTA
CCTTAAGGGAAGAAATTTTCGCGGGAATGAACTTTTGCGGAACGAATTTT
TGTGGAAATAAACTTTTGCGGAACGAATTTTCGCGGAATTTAATTTCGCG
GTTTTTTGACAAATCTGCGAAATTAAATTTCGCGAAACACGAATATTTTT
AGGATTTAAAGTTTAGCTTAAGGTAGTTGGTTTGGATTTTTAAAATAGAA
TGAAGCAAGGCATTTATTTGAAAAAAGGGTATTGAAAAGATGTGTTTCAT
GTTGGCGACTTCGTCAAATTCTCCTAATCTACTTCACTGAACCCAAGGGC
ATCAAAAATCATTAAAAAAGTAGAAATTAGCCAGAATTAGACTTTAGTCT
GGAAGGGTTCTAGGTTCGTTGATAAACAGCCTATAAAATCTACCGCACGA
AGAATAGTCAATCTGTCGTAAAAATGCGGCGCGAAAATTAAGTTTTTTGT
ATCTAAAAACAAGCTTAACTTTTATCGATTTATCTATCGATGTCTATAGT
CATTTCTAAATATGTTTAGTTTAGCAAATGGATATATCATGCAGATCATC
ACCAAGATGGCATTTTCGCTTGATTGCTCCAACCAATCAGATCTCAACAA
ACAATTGGTCCAACTATCACACCTCTTTACTAGACCTCCAACATGGCTTC
AAAGCTGTTCCAGTCTCCCAATCATTGGAAACTTGTTGAAACTTTCCCCA
TGGGGATTTAACTCAAGTTTGCATCAGTTCATAAAGATTGCAACAGACAT
TGTTGTGGAAAGACGCAAAGAAAAGAATCGCGAACCACAGGTAAGCGCCT
GAGTAACTAGCATGCTGGCATCCACTAACGGATTCTTCTTCCTCATACTA
ACTGCAGTTTGGTAGAGGTCTGAGATTTAGATTACTGAGCAACCTCATCC
CTAAGCATGGAGTGATTCACCTTCAAGAAAAACTTTGTCCAAACAAATAA
CTTTGTGAGAGAATCACTACAGATTATGATTTTTCACGAAAAATAGTTTT
CTACCGAGTACGAGTAATGACTAATAGTCTCTATAAAATTGATTACAATT
CAGTTGTTTTTATTGATGATGCAACGTTGGCTCGAAAGTATATGTTTAGA
CAAACGTGTAGTATACTCTTCGCAATTTCATATTTTGCCTGTTTGTCTGT
CAAATAATTTTTTTCTATTTGGAAAACTACATACTTACAATCTGGCTCTC
CCAGTGTCGTTCGAGTGTCATGGTATACGCCATGGCTTGGCAGCTCGCGT
CTGTCTAGTTGCAGTGTCTGTCAGCGCCGTGATTCCTACTCTTTCGTGGG
TAGGACCCATCCCAAATGCATTCGGAGGGCTATCTATCTATATCTATATA
TCTATCTATTATACTTACAATCAACCTACTTCCAAGACTATTAATATAAA
TATTTGTCAACAATCAATACTTTTGCTTCTCTTTCTAGGATGTATTGGAC
GTTCTGTTAGCAGCACAATCCAAAGACTCCAACATCAGCACTGAAATTCT
ATTAGCTCAGGCTATTGTTCTCCTCACTGTCGTCCACGCTTCAACCGCCA
CGACGATCTCCATAGCAACCTATTATATCGCCAAACACAAAGATGTACAA
AGGAGACTACAACAAGAGATTGACAGTATCTCAATGGAAGATGGATTTCC
ATCTTGGGAACATCTACATAAACAGTTGCCATACCTTGGACAAGTTGTCA
ATGAAACTTTACGCCTCTACCCGTCAGGTAAATATTCTATGTTTCTTTCA
TAGACGAGACAATATTAATTTAACTTTTTTTTGTTTTACGGGACGAGATG
GAGTTTTTACTAGCTCCTATTTGATTTGAAATTAATAAGTTAATAAGTAC
AAACAATTACTAGACATAGGAAGGCGGAATTCAAGGATAAATCAGGGAAG
TCAGCGCTTATACTTACGTGTTTGAAATACAGGTGACGCTCTCTTATTCG
GTTTCAAGGGTTTGGATTTTTATCGAATAAAGGGAGCTTATTGAATGGGA
GAACGTCGTTTATGAAACTTTGTTGTTGGCAGTGACTTTCAATATAATCA
AACAATGGAGCGTATCTACAGAAGAACCTTAGAATTAGGGGACAAGCTGG
AGTTTTTTACAAGCTCTTATTTGATTTGGTTGGTCGTTAACCAGTAATAA
AACAATTCTGTTACTTTTTTCTAAAGAACGCGTCATCTCTATCACTTCAA
ATGACCAATTAGTGAAGTATCTTGTAAAAACTCAACTCATCACAGAATTA
GAGAGCGTAACGACCTCGTACAAGTTCGAATTAGAGATAGCCAACTGTAC
TTTCTTTTATTCAGCCTTTATGTTGATGCGTGAATGTACAAAGCCAACAA
CAGTCAATGGCATCTCCTTTGAAAAAGGTGACGGAGTTCTCATCCCAACC
TATTCGATGCATCGAGATCCTAAAGTTTTCACTGATCCTGAACAATTCAA
TCCAGACCGGTTCGAGTAAGTCCATCAAAGCTCATTTTGAACTTGAAAAA
CCCAGTGGAATACCAAAGTGTTGTCAGCCAATATTTCACTGTACCCTAAG
CTCCCAAATAAATGTCTCCCCCGCTTATTAAGTCGAAAAGTTTTTGCCTA
TCTATCTAAGGTGAAGTCGTCCTTCAGGTTTTTTTATAAAATATCCCATC
ATGGACCATCACTTCAGGATTGCTCCCAAAGGGATAGAGAATGGTGTGAT
ATTTCGGGAAATTTGCGATCGTTATCCTAATGCTGCTTGTGGATGTGTGA
ATATGGAAAGATGGAAAGATGGGTACCCTCCCTAGGAAGTGACATTCGGA
GAAGGGATAAAATTAAAAAGGTTTTTTGAAATTTAGGTGCAAATACGGAA
AATAATTGAAACTTGAAAGGAATATATGAATCATAATTTTGTCCTTATAT
TTTATGCAGTTTTCCTTTTCCCTGTGAGAAAATTTTCTTGCGCCTATTGT
GAAAAATCACATCATCCAGTATCCAACCAGGATTACTCTGGGTGGGATAA
TGTTGGTGGGATATTTCTGGACATTTGCGGTCGTATCCTAAAACAGCTAT
GTAATTTATAAAATATCAGTGGATGAAATTGATAGACCCCTCAAAGTGTT
CGAAATTATGTACAGTTCCAGAATTGTTGAGGTTTCAGAGTTTGTTGAAT
ATAATATGTTTCAAAGTTATATCAATGAGGATGTTTTGTAAGTGAAGTAT
TTTGTGGAGTATGTAAAATTGTTTATTTTGATCAGCTTTTGGAAAAAATC
CCAAGGCCAAGAGAGTTAAAGGTGAGAATATGTAGAGTCTGTGTGAAAAA
TTGAAAATTAAAATAAGAAAAGAACTTTCTATGCTCTGGAGGTGGAGTAT
GCACAATATTTGCATATTTATTTGGTAGACTTGAGCGCCCCAAGACTGTG
CAATTGAATAGAGCTGTGGGAGAAAAATTCTGGTAGAATGTCTTTGGGGT
GATAATAGACTAGAATTGCAGATTTTATGCAATGAAGACTGCTGTAGCAG
AAGATCTTAATGTTAAAATGTGAAATTAAAATGAACAACAGATGAGATGG
AGACACCCCCACCAAGGGGGTGCCTGGAGACAGGTGCGGATCCTGGAGTA
AGCTCTCCTTGCCACTCTAGAGTCACCCACCACTCCAACGCCCCCTTTCC
TATTAGAACCACTAGTTTAGCTAACACAAGCTGAATTGCTTTTAGGCTGC
GCGCATCTCCGGTTTTGATTTTGATATAGTGGATGCTGCGTATCATGTAT
AAAATTTCCGTCCGAGATTTACCCTAATATTTACCCTGTTTCAATTTCAT
TTAAAAAGTTATAAAAATTAGTGATTGTATTAACATCTAATCATTCAAAT
TTTTAATTGAAATTTGATGAAATTTAAAGATCTATCATATTACATATTAC
TTTATCAAGCTAATCAATTTTCAAAAATTCAAAAACAGAAAGACGGACGG
GAATTTTATACACGATATGCTGCTCCGAGATCTAATAATTTCCAAAGGAT
CAAACTATTTCTATAATAAAGAGGAAAGATAAACATTTATCAAATTTGGC
CAAATTTGACGTAGATTTAAAAAATCAAATGCAAAAACAAAGGTTTTTGT
CGTATTAAAAGTTAAGGCCCTTTGGAGAACTACCGGTATCTCGACCACGC
TACTATAAGTATACTATCGTAGTCGGCAGAGAACGTGTTCAAGATTCCCC
ATCTTTTGTAGAGTAAAAACTATTTTTACACTTAGTTGTAAATGTAGTTT
CAAAATAATTAACTATTTTAGGACCAAACCATCAAGACATTATTATCCGT
TCGGTGACGGCTACCGTATGTGTCCGGGAAAAGAAATGGCTTTGTCCGAA
ATTAAAACCTACTTAGCTTCGATGTTGAAAAACTTTGATTTGTCACTTGT
TGACGAGAACCAAGAATTATGCGTCAAATCATACATTTCAGCTCAAACCA
CAATGGCGGTGGATGAACCAATCCAAATTCGTGTACAAAAAAGACGTCAT
TAGATGTAATTTATAATGTAACCAAGGATGTCCTATATCTACCATCGGTT
AAATTTTGCAGATTTTTCGAATCCATGGAAACAATTGATGATCTGTTTTC
TGGATGTTATATCTCTGATCAACCTCTACACCAATACTTCATGACAAAGA
GTACGAGTTTACTTGTGTCTAATGACGGATGTTTGAAGTCATTGATGTGT
TTTAATAGATACACTCTCTTGGACCCCCCTCCCCCTGACCCACTGGAAAG
TTTTTCCAAATTTTCGTCCCCGGTAGAAAAAAATACCCTAAAATTTCAGG
CCTATTTGCTTTTTTGACCGCTAAAAACAAAAGAATTTTATTCCCCATTG
GCGGGAGTTCGATAGAGATTTTATCCCCACTGTGGGAAGAATTTCTAACG
GGGCTTAGTGACAGAGGTGTAGATACAGATATTTGACTCCGATAAGTCCG
AACACAACCTTCTTGTGAATTTCGGGTTAACTGGTATATTCGGTTAATGA
AAGACTGTATTATAGTATGGCGCGCCAAAAGGCTATTTAATACTAACTTT
TTTTATAATACCAACTTTTTTTTATAATATCAACTTTTTTTATAATATCA
ACTTTTTTTTTTATAATACCAACTTTTTTTTTTATAAAACCAACTTTTTT
TTTATAGTACCAACTTTTTTTTTAGTTCAAAGTTTTTTCATAACACCAAT
TTTTGTCTCGCTTACTATGCGTGTATAATCGATCAAGTGTATTAAAATGA
AAGTTGGTATTATAAAAAAAAAGTTGATATTATAAAAAAAGTTGGTATTA
TAAAAAAAAGCTGGTATTATAAAAAAAAGTTAGTATTAAAAAGCCTTTTT
GGCGCGCCATATTATAGCCTCACATTCGTAACAAAAGTTGTGCAGGTATC
ATAACATATCCACATTAAAACGGAGTATGGGAGGTGTTGAAGAACCAAGA
ACTTTTGTATATGGTTCATTGCAGAAGAAAAAGTTGGTAATATTTTGTTT
GGTTAAATTCAAGAAGGAATAAATTTATTTTAAAAAGACAATTATTTCTT
CATTATGTTAATTGTAAATAATCATGCATATATATAATCTTTAATATGGT
GCTTATTAAAAAAACACATGAATCTTAAAATAGCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005784XLOC_005784Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00010298-exon-sc0000104-1575043694:184072..184108TCONS_00010298-exon-sc0000104-1575043694:184072..184108Clytia hemisphaericaexon
TCONS_00010298-exon-sc0000104-1575043694:182618..183035TCONS_00010298-exon-sc0000104-1575043694:182618..183035Clytia hemisphaericaexon
TCONS_00010298-exon-sc0000104-1575043694:181803..182008TCONS_00010298-exon-sc0000104-1575043694:181803..182008Clytia hemisphaericaexon
TCONS_00010298-exon-sc0000104-1575043694:180219..180489TCONS_00010298-exon-sc0000104-1575043694:180219..180489Clytia hemisphaericaexon
TCONS_00010298-exon-sc0000104-1575043694:179282..179570TCONS_00010298-exon-sc0000104-1575043694:179282..179570Clytia hemisphaericaexon
TCONS_00010298-exon-sc0000104-1575043694:178544..178694TCONS_00010298-exon-sc0000104-1575043694:178544..178694Clytia hemisphaericaexon
TCONS_00010298-exon-sc0000104-1575043694:175374..176737TCONS_00010298-exon-sc0000104-1575043694:175374..176737Clytia hemisphaericaexon
TCONS_00010298-exon-sc0000104-1510915933:184072..184108TCONS_00010298-exon-sc0000104-1510915933:184072..184108Clytia hemisphaericaexon
TCONS_00010298-exon-sc0000104-1510915933:182618..183035TCONS_00010298-exon-sc0000104-1510915933:182618..183035Clytia hemisphaericaexon
TCONS_00010298-exon-sc0000104-1510915933:181803..182008TCONS_00010298-exon-sc0000104-1510915933:181803..182008Clytia hemisphaericaexon
TCONS_00010298-exon-sc0000104-1510915933:180219..180489TCONS_00010298-exon-sc0000104-1510915933:180219..180489Clytia hemisphaericaexon
TCONS_00010298-exon-sc0000104-1510915933:179282..179570TCONS_00010298-exon-sc0000104-1510915933:179282..179570Clytia hemisphaericaexon
TCONS_00010298-exon-sc0000104-1510915933:178544..178694TCONS_00010298-exon-sc0000104-1510915933:178544..178694Clytia hemisphaericaexon
TCONS_00010298-exon-sc0000104-1510915933:175374..176737TCONS_00010298-exon-sc0000104-1510915933:175374..176737Clytia hemisphaericaexon
TCONS_00010298-exon-sc0000104-1491911889:184072..184108TCONS_00010298-exon-sc0000104-1491911889:184072..184108Clytia hemisphaericaexon
TCONS_00010298-exon-sc0000104-1491911889:182618..183035TCONS_00010298-exon-sc0000104-1491911889:182618..183035Clytia hemisphaericaexon
TCONS_00010298-exon-sc0000104-1491911889:181803..182008TCONS_00010298-exon-sc0000104-1491911889:181803..182008Clytia hemisphaericaexon
TCONS_00010298-exon-sc0000104-1491911889:180219..180489TCONS_00010298-exon-sc0000104-1491911889:180219..180489Clytia hemisphaericaexon
TCONS_00010298-exon-sc0000104-1491911889:179282..179570TCONS_00010298-exon-sc0000104-1491911889:179282..179570Clytia hemisphaericaexon
TCONS_00010298-exon-sc0000104-1491911889:178544..178694TCONS_00010298-exon-sc0000104-1491911889:178544..178694Clytia hemisphaericaexon
TCONS_00010298-exon-sc0000104-1491911889:175374..176737TCONS_00010298-exon-sc0000104-1491911889:175374..176737Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000104supercontigsc0000104:175374..184108 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.20836e-06	0.000331125	7.59488e-09	0	1.89855e-05	0	0.00444495	0.00321847	0.00249362	0	3.58071e-10	0.030752	1.08131e-08	2.34104e-10	0.0048871	0.286567	1.16217e-05	0.00833558	0.0892567	7.11162e-05	0.0133092	0.00299093	0.00236753	0.0816402	8.87059e-05	3.5194e-09	0.379571	0.100068	0.00533572	0.000525689
Blast
[Close]
BLAST of TCONS_00010298 vs. Swiss-Prot (Human)
Match: CP3A4 (Cytochrome P450 3A4 OS=Homo sapiens GN=CYP3A4 PE=1 SV=4)

HSP 1 Score: 167.933 bits (424), Expect = 5.120e-44
Identity = 137/477 (28.72%), Postives = 239/477 (50.10%), Query Frame = 3 
Query:  219 HDRLSSWNLPGPKSSLLPIDLFKGHKNQHQLHLLLD-DYVKTYGETFAFNYKGQPVVATTDEDIIHKILWKE-FPNFENRKFFVEMPWPCQHMVTMAKGAKAKMIRNLLKAVLDAKSIKNNWAHFQEANQDVEELLRDAALNMLEVNSTSLANGYIMQIITKMAFSLDCSNQSDLNKQLVQLSHLFTR----PPTWLQSCSSLPIIGNLLK-LSPWGFNSSLHQFIKIATDIVVERRKEKNREPQ-DVLDVLLAAQ-SKDSN----ISTEILLAQAIVLLTVVHXXXXXXXXXXXXXXXKHKDVQRRLQQEIDSISMEDGFPSWEHLHKQLPYLGQVVNETLRLYPSAFMLMRECTKPTTVNGISFEKGDGVLIPTYSMHRDPKVFTDPEQFNPDRFETKPSRH-----YYPFGDGYRMCPGKEMALSEIKTYLASMLKNFDLSLVDENQELCVKSYISAQTTMAVDEPIQIRVQKR 1595
            H       +PGP     P+       + H+   + D +  K YG+ + F    QPV+A TD D+I  +L KE +  F NR+ F  + +  +  +++A+  + K +R+LL     +  +K       +    +   LR  A     V    +   Y M +IT  +F ++  + ++     V+ +    R     P +L S +  P +  +L+ L+   F   +  F++ +   + E R E  ++ + D L +++ +Q SK++     +S   L+AQ+I+ +   + +T++ +S   Y +A H DVQ++LQ+EID++      P+++ +  Q+ YL  VVNETLRL+P A  L R C K   +NG+   KG  V+IP+Y++HRDPK +T+PE+F P+RF  K   +     Y PFG G R C G   AL  +K  L  +L+NF      E Q   +   +S    +  ++P+ ++V+ R
Sbjct:   30 HGLFKKLGIPGPT----PLPFLGNILSYHKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPVGF-MKSAISIAEDEEWKRLRSLLSPTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKLLRFDFLDPFFL-SITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVL-QMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQ---IPLKLSLGGLLQPEKPVVLKVESR 496
The following BLAST results are available for this feature:
BLAST of TCONS_00010298 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CP3A45.120e-4428.72Cytochrome P450 3A4 OS=Homo sapiens GN=CYP3A4 PE=1... [more]
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