TCONS_00010373 (transcript) - C. hemisphaerica

Overview
NameTCONS_00010373
Unique NameTCONS_00010373
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length451

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00010373 ID=TCONS_00010373|Name=TCONS_00010373|organism=Clytia hemisphaerica|type=transcript|length=451bp
ATAGCATTGATGTGGAAGGTTTCCTCACTGGCTTGCATCTTCTGTTGTTC
AGTGATGGGCAATGGATGTCGACTGTTGTAATCTGTCGGATTGGTGCTTC
CCTTTTCATACTTTACGGTCATACGGTACTGTTGTAACTTCAATCGGTGA
TTCTCGATGCGAGCTGGGGCTTGTCTTCGTTGATCATTGTACAATGAGAC
CAGCGGCTCATGATCAGTTATTGTGTCGAATTTTATTCCGTGGAGATACA
TTCGGTTGGTCATGACGCCGAAAAAGATAGCTAAGCTTCCACCCTCGTTC
TGTCTCTGTTAACGATCTACTCGAGTAGTTGATTGTTTTGTAATGTCCAG
TGTCGGGTTCCTTTTGAAACAATGTGGCGCCAATACCCTTCGGTCCTCGG
TCAACTCGGGTGCCCAGGGTGCTATTACTCGGTTGTTACATAAACCCTCT
T
Run BLAST on NCBI

transcript from alignment at sc0000104:610244..610694

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00010373 ID=TCONS_00010373|Name=TCONS_00010373|organism=Clytia hemisphaerica|type=transcript|length=451bp|location=Sequence derived from alignment at sc0000104:610244..610694 (Clytia hemisphaerica)
AAGAGGGTTTATGTAACAACCGAGTAATAGCACCCTGGGCACCCGAGTTG
ACCGAGGACCGAAGGGTATTGGCGCCACATTGTTTCAAAAGGAACCCGAC
ACTGGACATTACAAAACAATCAACTACTCGAGTAGATCGTTAACAGAGAC
AGAACGAGGGTGGAAGCTTAGCTATCTTTTTCGGCGTCATGACCAACCGA
ATGTATCTCCACGGAATAAAATTCGACACAATAACTGATCATGAGCCGCT
GGTCTCATTGTACAATGATCAACGAAGACAAGCCCCAGCTCGCATCGAGA
ATCACCGATTGAAGTTACAACAGTACCGTATGACCGTAAAGTATGAAAAG
GGAAGCACCAATCCGACAGATTACAACAGTCGACATCCATTGCCCATCAC
TGAACAACAGAAGATGCAAGCCAGTGAGGAAACCTTCCACATCAATGCTA
T
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005832XLOC_005832Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00010373-exon-sc0000104-1491911889:610244..610694TCONS_00010373-exon-sc0000104-1491911889:610244..610694Clytia hemisphaericaexon
TCONS_00010373-exon-sc0000104-1510915933:610244..610694TCONS_00010373-exon-sc0000104-1510915933:610244..610694Clytia hemisphaericaexon
TCONS_00010373-exon-sc0000104-1575043694:610244..610694TCONS_00010373-exon-sc0000104-1575043694:610244..610694Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000104supercontigsc0000104:610244..610694 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.32608	0.582921	1.11802	0.570583	1.64385	0.245111	1.77404	0.720093	0.602085	0.782236	2.19566	0.79817	0.473882	0.807989	0.618428	0.909174	0.809987	0.667331	0.155841	0.853154	0.781636	1.78813	0.168091	0.305639	0.820624	0.477099	0	0.42907	1.0442	0.185553
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00010373 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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