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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00010410 ID=TCONS_00010410|Name=TCONS_00010410|organism=Clytia hemisphaerica|type=transcript|length=185bp
ATTTGTAAAACAAgagCTTGAAAACCAACTGTGTGGACAACTCCTGACCA
GTTGTCATCTCTGTCTTACCCATCATTATGACTGATTTATTCAGATTTCA
AGACCAAAGGGTTACTAAACCCCTACTGAAGGGTTAAACCCTTCAACCAA
CCTACCTCAGATTACTTGGCATCACCAGATTACCT Run BLAST on NCBI transcript from alignment at sc0000106:420336..422424+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00010410 ID=TCONS_00010410|Name=TCONS_00010410|organism=Clytia hemisphaerica|type=transcript|length=2089bp|location=Sequence derived from alignment at sc0000106:420336..422424+ (Clytia hemisphaerica)
ATTTGTAAAACAAgaggtatgtattttttttggaatataaatttttcagA
TCGAGTAGAATAGGCCACAAAACGTCTCATCCTGACCACCCCTTTCTAAT
CCCGACCTACCTTTAAAATAAAccatttttccaaatttagatGGAATTTT
ATATTGGACCAGTAGATTAGTTCTTCTTCATACTATTCAATTAAAGTAAA
GTTTTTAAAGTAAAGACAGTATTTTCTGTAAATTAGAGGTAGGTCAGGAT
TAGGAAAGGGGTGGTCAGGATTAGACAATCTGACGATATCAGATTCAAGA
TTTTTCTGCTATAAAAATGATtctgtcaatcgaacgaattgaACGCCGAT
TTGAATGATGCGAttaattcgattgtcgaatcgaatttaatcgcaatcac
atattacccaggatttatTGCCGTTCGATTATGAGATATAATTGAATCAA
TTGAATATTACTTGCTCTAACTAAGTGTGCCGCatttaatttttgtgatt
ttaggtGCGCACTTTTTAAATAGGGGACAGCGCTTAATAGAGGGCGGTGC
TTGATAGAGGGAATTCTGTGGTCGCGGCCTTGTCtgatcaaacgcaatcg
aacatcattGTCCATGAATTGAAcgaatcaaacgtaatcgacaGTCAATA
GAACCAATCATTAATGCACGTCCCTGGCAACCCCCAGAAATTTCCAGGGC
GATATGGGGGTAGACATTAATTGCCCGCTTTTCCTCTTGCCTTTTCTTCC
GCTCTATCCCGAAAACGAGCATGACGAAGGAGAGAACGGCCACAACCATT
ACCTAGTAAAATTTTGGACAGTCAATTTGGCTGTGTTTGAATACATTCTC
TTTTACATCTTAGGGGTCTTTGACAaaagattttcgaattttttatcggc
atttaGCCGATTAGGGGGGGAGGAGTTCCAActacataccgataaaaaaG
CAAGTATTGtgatgaaaatctttttgatttcgtccacaaactcAACTGAA
AGCATGCAATTTCACTTGTTTTCACCTTCGCGCACAAATCTGcaacttta
aaagtacagttttgaattagctttgataaaaaaactctttttccaTTGGC
CAGCGCACTgccttttctttcaaaatgttggGAATTCATTGCgtcttttt
taaaacttttggaactaattttcacggtttttctcaaaaattattatTGT
ATATAATTTTTATGTGTTACACCAGGATCAactgtgaaaatttgagaatt
gAACTAACCGCAAAAATGAATTCccgcaaaatgcaatttttctgattttt
ttacggaccgtgaaaattagttccctttaaGGTATATAGAATAAACATAG
CAGAAATATTATTAGAACAGCCTTTCATCTGCTTCAAAATGGTTATAAAA
TTggtaaatttttaaattctttgaTGTTAAATTAATATTTCTTCTTTTCA
GCTTGAAAACCAACTGTGTGGACAACTCCTGACCAGTTGTCATCTCTGTC
TTACCCATCATTATGACTGATTTATTCAGGTTAGTACTTACTGAGATTGA
GGGGGAATCGAAAGCATAGGTCTAACTTGacatcatttttcattgcttgc
AGCAGGAATATGTAATAGCAAAGCTGGATGATGAACAAGAACTCCTTAGG
AAACTGCATCCCTTTTCTATGttaactgttcataatagaaaccATCTATG
TACCCTTTAAGTGttctattttataagaaaaaaaggcCAGGAAAGCTTTT
CATACAGTAATTCTGCTCAGATTTTAACtgttttcatggaaaaaaagttC
CCAGTAAGTAAATAGTCAAGAGCTTTCTCgtaaatgaaatttatttttat
cagaATGTGCCATGAATTTGACTAGCTTTTTGTGATTTCTCTTGAATAAC
TTTGcatgtaaatattttctttgactaATTAATTTCCAATTGATATGATG
ATGGATAGTATACATCTTTCTAAattccttttttatttctttttacagAT
TTCAAGACCAAAGGGTTACTAAACCCCTACTGAAGGGTTAAACCCTTCAA
CCAACCTACCTCAGATTACTTGGCATCACCAGATTACCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00010410-exon-sc0000106-1491911889:420336..420351 | TCONS_00010410-exon-sc0000106-1491911889:420336..420351 | Clytia hemisphaerica | exon |
| TCONS_00010410-exon-sc0000106-1510915933:420336..420351 | TCONS_00010410-exon-sc0000106-1510915933:420336..420351 | Clytia hemisphaerica | exon |
| TCONS_00010410-exon-sc0000106-1575043694:420336..420351 | TCONS_00010410-exon-sc0000106-1575043694:420336..420351 | Clytia hemisphaerica | exon |
| TCONS_00010410-exon-sc0000106-1491911889:421787..421864 | TCONS_00010410-exon-sc0000106-1491911889:421787..421864 | Clytia hemisphaerica | exon |
| TCONS_00010410-exon-sc0000106-1510915933:421787..421864 | TCONS_00010410-exon-sc0000106-1510915933:421787..421864 | Clytia hemisphaerica | exon |
| TCONS_00010410-exon-sc0000106-1575043694:421787..421864 | TCONS_00010410-exon-sc0000106-1575043694:421787..421864 | Clytia hemisphaerica | exon |
| TCONS_00010410-exon-sc0000106-1491911889:422334..422424 | TCONS_00010410-exon-sc0000106-1491911889:422334..422424 | Clytia hemisphaerica | exon |
| TCONS_00010410-exon-sc0000106-1510915933:422334..422424 | TCONS_00010410-exon-sc0000106-1510915933:422334..422424 | Clytia hemisphaerica | exon |
| TCONS_00010410-exon-sc0000106-1575043694:422334..422424 | TCONS_00010410-exon-sc0000106-1575043694:422334..422424 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000106 | supercontig | sc0000106:420336..422424 + |
Blast
The following BLAST results are available for this feature:
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