TCONS_00010670 (transcript) - C. hemisphaerica

Overview
NameTCONS_00010670
Unique NameTCONS_00010670
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length344

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00010670 ID=TCONS_00010670|Name=TCONS_00010670|organism=Clytia hemisphaerica|type=transcript|length=344bp
ATTTTAAAATCAAAGTTCAATACAGTAAATATAACAACTTAGATATTGAT
ATCTGGCCGTATTACAATATTCAATTGCGAACACCCTATGGAATGTTACA
GCCGGGCGAATGGATATCATTTATTTTTCATGCACATGAAACGTGCCTTA
GAACGTCTGACCTACTTCCTCCACGACGTGCAACTATTTCCGGTGTACCT
TGTTACATACCCAACAAGGTTCTTCCATATTTTCGCGGAAATTTTGGATC
AGATCCGAACAAATGGATACCAGAATTAACTTGTAAACGAAAAAGTGGAG
AAAATtgtatttcttgattttataaaatttgtggaaaaaacttt
Run BLAST on NCBI

transcript from alignment at sc0000108:352073..352416

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00010670 ID=TCONS_00010670|Name=TCONS_00010670|organism=Clytia hemisphaerica|type=transcript|length=344bp|location=Sequence derived from alignment at sc0000108:352073..352416 (Clytia hemisphaerica)
aaagttttttccacaaattttataaaatcaagaaatacaATTTTCTCCAC
TTTTTCGTTTACAAGTTAATTCTGGTATCCATTTGTTCGGATCTGATCCA
AAATTTCCGCGAAAATATGGAAGAACCTTGTTGGGTATGTAACAAGGTAC
ACCGGAAATAGTTGCACGTCGTGGAGGAAGTAGGTCAGACGTTCTAAGGC
ACGTTTCATGTGCATGAAAAATAAATGATATCCATTCGCCCGGCTGTAAC
ATTCCATAGGGTGTTCGCAATTGAATATTGTAATACGGCCAGATATCAAT
ATCTAAGTTGTTATATTTACTGTATTGAACTTTGATTTTAAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005982XLOC_005982Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00010670-exon-sc0000108-1491911889:352073..352416TCONS_00010670-exon-sc0000108-1491911889:352073..352416Clytia hemisphaericaexon
TCONS_00010670-exon-sc0000108-1510915933:352073..352416TCONS_00010670-exon-sc0000108-1510915933:352073..352416Clytia hemisphaericaexon
TCONS_00010670-exon-sc0000108-1575043694:352073..352416TCONS_00010670-exon-sc0000108-1575043694:352073..352416Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000108supercontigsc0000108:352073..352416 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0.280049	1.0136	0.632614	0.442908	0	0	0.875107	2.44689	3.81168	6.71512	4.00353	0.591842	0	0	0	0	0	0	0	0	0.251815	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00010670 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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