TCONS_00010778 (transcript) - C. hemisphaerica

Overview
NameTCONS_00010778
Unique NameTCONS_00010778
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1282

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00010778 ID=TCONS_00010778|Name=TCONS_00010778|organism=Clytia hemisphaerica|type=transcript|length=1282bp
TTTTTTTTATTATGGTGAAAGTTACGTTTTGATGCAAATATTAGTTTTAG
CAAAAGATAAAgaacaaattttctttctcttattatttttctattttgca
taatttttgaatttataaTTCTTTGCACCAAACAATGTTGTTGATCGTAG
CATTTATTTTGTTCTTGTTGACGTTATTTGTGTACCTATTTCTATCATTG
TATTCGAAGTATGCTGTTTTGTCTATACTATGGCTTGTCAAGTTTCTTGG
TGGATTCGAATCAAAAACGGTGAAACCATCAAACTCAAACCAAACTTTCT
CCTACATGGAAAGAGGTCATAGATCGAAGGATCACAATACAGTTGTTTTC
ATTCACGGCTTTACTGCAACAAAAGAATcttttgctgacgtcagtaaATA
TCTATCAACGAAATATCATATCGTCTCACTGGATTTGCCAGGGCATGGAA
TGACGTCAGGAGATACACCAGATGATGTTGGAATAGCGTATTTTGTGGAA
GAAGTGAAAAAATTTTTAGATGCTATTGGTCTTGGTGATACAAAGATCCA
TTTGATTGGTGAATCAATGGGTGGACACATTGTTGGCTATTTTGCAGCTA
TGTATCCAAACAGTATTGCATGTGTTACTATGGTTTGCCCACATGGAATT
TATTTCAACGAACTAAAGGAGCCAAAAGAAGTATTTTTACGAACAGGAAA
ACATTACTTGTTGCCTGAAGATTATGCTGGTGTTAAAAATATGATGTTGT
ATTTGTCACATAAACAGACGTTTGTACCAGAATTTGTATTTAAAGGAATG
TTAGAGCTTAGAATGGAACGAAACAACTTCTATAagaaagTGTTGAATAA
CTTATTGTTACCACCAAATGATAGACTTCTTGAAAGTTCGTTGAAGCAAA
TCATCTCACCATCAATGTTAATGTGGGGAAAACTCGATAAGGTTCTTGAT
GCATCTTGTGTTGATGTTATCAAGAAAAATGTTCCCAACTTGAAGAAATG
TGTTCTCCTTGAGAATACTGGTCATGTATTGACATTTGAGACTCCCAAAG
AAGTTGCTACTAGTCTGGATCAACTTATAAATagtttataaaatttttta
attgtaCCTTAATAGAACTGATTTTGGCGAAGagcaaaaatttaacaaaa
tctaAGTtggagaaaaattattttggcaagtaacgtaatttttcaatttc
tgctACGTGCTAGAATTAATTTTGTCGAGGCAGTCAATCTTTAAATTTTG
ACGAGAactaatttggcgaattttctTCACCA
Run BLAST on NCBI

protein sequence of TCONS_00010778-protein

>TCONS_00010778-protein ID=TCONS_00010778-protein|Name=TCONS_00010778-protein|organism=Clytia hemisphaerica|type=polypeptide|length=318bp
MLLIVAFILFLLTLFVYLFLSLYSKYAVLSILWLVKFLGGFESKTVKPSN
SNQTFSYMERGHRSKDHNTVVFIHGFTATKESFADVSKYLSTKYHIVSLD
LPGHGMTSGDTPDDVGIAYFVEEVKKFLDAIGLGDTKIHLIGESMGGHIV
GYFAAMYPNSIACVTMVCPHGIYFNELKEPKEVFLRTGKHYLLPEDYAGV
KNMMLYLSHKQTFVPEFVFKGMLELRMERNNFYKKVLNNLLLPPNDRLLE
SSLKQIISPSMLMWGKLDKVLDASCVDVIKKNVPNLKKCVLLENTGHVLT
FETPKEVATSLDQLINSL
Run BLAST on NCBI

transcript from alignment at sc0000117:58076..63717+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00010778 ID=TCONS_00010778|Name=TCONS_00010778|organism=Clytia hemisphaerica|type=transcript|length=5642bp|location=Sequence derived from alignment at sc0000117:58076..63717+ (Clytia hemisphaerica)
TTTTTTTTATTATGGTGAAAGTTACGTTTTGATGCAAATATTAGTTTTAG
CAAAAGATAAAgaacaaattttctttctcttattatttttctattttgca
taatttttgaatttataaTTCTTTGCACCAAACAATGTTGTTGATCGTAG
CATTTATTTTGTTCTTGTTGACGTTATTTGTGTACCTATTTCTATCATTG
TATTCGAAGTATGCTGTTTTGTCTATACTATGGTAATAATTTCCTAGTTT
TcatccttttttattttaccaAGCTCGTAATATTTCATGAGCTCATAATG
TTCACATAGGCATTTCGCATACCATATTATATCATATGATATAGGGCTGC
TTTTCCCGTTTGTAAACTATATAAAAAACTTTGTGCAAAAGGGATAAAAA
TCTTATATCTTTAGATAAAAAAACTTGGCTAGTTTGGCAGTAGAAGCTGT
TTAGAATATAGCTTAGATTAGATATTAGATCTTTCGGAGCATCGCTAAAT
CAGCATCGACAAAAAAACATTACACATGAGAAAAGGTAGCAAGAAATATT
ccctgaaattttgaaaaatcacttttgaaaGTCTGAGAAACATCAACAAA
TACTATACGCAACTCATCTTAAATTATACTTTTTGTGTTATTCAGGCTTG
TCAAGTTTCTTGGTGGATTCGAATCAAAAACGGTGAAACCATCAAACTCA
AACCAAACTTTCTCCTACATGGAAAGAGGTCATAGATCGAAGGATCACAA
TACAGTTGTTTTCATTCACGGCTTTACTGCAACAAAAGAATcttttgctg
acgtcagtaaATATCTATCAACGAAATATCATATCGTCTCACTGGATTTG
CCAGGGCATGGAATGACGTCAGGAGATACACCAGATGATGTTGGAATAGC
GTATTTTGTGGAAGAAGTGAAAAAAGTAAAAGCTAGTGGTTGAAATCTTT
AGTTTCCCTGTTTCGCTTTGTGACATGCATGGTTTAGGTCGATACACTGA
ATATCAATGGGGNTTCCCTGTTTCGCTTTGTGACATGTATGGTTTAGCTC
GATACACTGAATATCAATGGGGAAACAAAATATTGGCTAATTAAGGGTTG
GAaattagagttttaactctgagttttaacatgagacttacgATTTAAGA
CGAGCTTAGAATCTGAGGGTTCAAAAGCTTGTAAATGGTCCGACTAGGCT
GAGAATATAACCTTGAAACCATAATACCCCTCAATACGGGATAaggtgga
gtttttacaagatacttcactaattggtcatttaaagtgatagagatgac
gcgttctttagaaaaagtaataagattcttttattacatcttaacgacca
accaaatcaaataagagcttgtaaaaactccagcttgtcccctcAATACC
TCATCCCTGATAAAGTTTTTGTAAAACGCTATAATACCCCAGAATTGCCA
ACATATTCCGGCCACTATTGAACTTATTTCCTTGTTTTGAAGAATTATCA
GCTTTGTAAGAATTCGAATAAGAACAGCGAATTTATATCATTACTGGGCC
CTAAGAAATTACAACGTTCTACACTCCTGCAGAaatgaaatagacctttt
tcaaagaggcaaccctgttgaataattatgtagtccagccatacaaacaa
tgatacagcaaagcataattactgtttcatgcatattgtaataattatgN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttcatg
catattgtaataattatgcatgggtgtatcattgtttttctgctggacta
cataattattcaacaaggtggcctctttgaaaaaaggtctatttcatgGT
TCTCCTTCGCACATAGAAGACgtttaacaaactttttttcctcgACAGTT
TTTAGATGCTATTGGTCTTGGTGATACAAAGATCCATTTGATTGGTGAAT
CAATGGGTGGACACATTGTTGGCTATTTTGCAGCTATGTATCCAAACAGT
ATTGCATGTGTTACTATGGTTTGCCCACATGGTAAATAAGTTGTGTTCCA
AACTCAAATCCAGTCTCTTAGCTCGCTTTTAAATTATTCTGATAATACTC
AACAACCTCAACAACTTCTAGACTGAAACGCCAGTCGGGCTGAAACGGGA
TCTCACGGGAAAAGTGAGAGTAGGAGTTAGGTAAAcataggaagaaattt
tgtcggcggcaagggctgaaagttAATCAGCGgtctctcaccaacttttg
ctcgttctcctacgcagctcttATTCTAGCAACCGCCCGctgcctttatg
ttcccgctcTTGTTCccgacatgattaattaacagactagttttcTAGTC
TAAACAGCTTCGTTCCCTGcatattatcagctttttatgCTTGCTGATAG
CGCTAGATTATACCCTAGCATTGTCTGTTTTTCGAATGAGAAAGATTACT
CGTATCAGCCAACACCatggtattctctggcgtcaatcagtaacgtaaat
aaattcTGGAATACAAGGGGATGAGATTGAGCACTCACTAAAGGTGACGA
TTGTATCACGTTCATtggtaaaattaaaaaagtggtgtaagtggctctgg
gtacgagattggtTGTGTTCTTTTTAAGAAAGTCTGCATGGTAAAACATA
TTGGGAATTTCAATCTTTAAAGtcaaaaatatatgaaatatgATTAAAGC
CAAAGCCAAAAGAGGTCAGAAAGATGATCAaagtagacgatcctatcgtg
tAATCGCCTTAACTTTTTCCTGCGTTTACTGACCTCTAAACGGACGGTCG
TCTATGATCAAAGTTGTTGACTATCGTCCCATAGTGTTCCCTAGATTCCT
CAATATGCCTAACCACCATCCAGCATACAAAAGAGCctaaacccgggggg
ggggggatNTTCTCGCGTTTACTGACCTCTAAACGGACGATATGATCAAA
GTTGTTGACTATCGTCCCATAGTGTTCCCTAGATTCCTCAATATGCCTAA
CCACCATCCAGCATACAAAAGAGCCTAAACCCGGGGGGGGTATGTGAAGA
GTACATTGTATCGCCctaaaatgtgtttttttagAACCTGGAAGTCCCTG
TAAAGATCGGAGGAAATCAGAAATTTAGAATTCAATCCCATTAAGGATtg
ggaaaataggaaaattttaactttttacccctTGTGGTGTCGAagtttgg
tcaaattagtcccaataggGGTAGTAAAATTCACgccaaatttccttttt
ttccttctttttagtcccgctaagggttcGAGGGTACCCTACCTCCTGCC
CCCGAGAGCTTGAACTACACTCATATCATGACTCTAAACTATGTTGAAAT
AACATCTGCATCAGTTGGATGACCAAAATCTgtaaattttgaagttttct
cACACagtcatatttttctttaaattttaccAGGAATTTATTTCAACGAA
CTAAAGGAGCCAAAAGAAGTATTTTTACGAACAGGAAAACATTACTTGTT
GCCTGAAGATTATGCTGGTGTTAAAAATATGATGTTGTATTTGTCACATA
AACAGACGTTTGTACCAGAATTTGTATTTAAAGGAATGTTAGAGCTTAGA
ATGGAACGAAACAACTTCTATAagaaaggtaagtactaataaACCAAATT
CGAACCCAGTccctgttttgtttttttggattttaggagCACTCGCAAAT
GTATCACGTCAATCAATAAAAGTAACTTAAGGGAAcctattttggcggga
actaattttgacgagcggcaaaaatcctgaaaatttttaattgtggcgag
aacttattttggcagtTGAAGATTTTTTGTGAACTGAAGAAGTTTATTTA
ggtaaaataccaaaaaatttaattttggcgagaacttattttggcgagtg
agcaaaatatttatttttggcgggaactaattttggcgaattttgtctaa
attcgccaaattcgccaaaaatTAGTACACGCAACAATCTCAAGGTTTAG
GGTTTCACatttaagggctacttagacagTCTAAGTAGTActctacacaa
tatattggtgagCAATATTCGACAATTTAGTTTTCGGGCCCTAATGTATA
CGgaggaattttcattttgtaaacaatccccccTTATGTTGTTAGAATAT
TGCAAATctagctgacaatatattgcggacaccttttcaatatatcgcCA
GCATTCAgaaatatatcatcaatatattgcttGAAAATATATCGTGCAGT
GTATGCAGCCCTTTAAAACTACTCCATGGTTTATTGTTACAGGCCATGTT
TGAAAGAAATTGAGCATTATTCCATTTTTCTTAATAGTGTTGAATAACTT
ATTGTTACCACCAAATGATAGACTTCTTGAAAGTTCGTTGAAGCAAATCA
TCTCACCATCAATGTTAATGTGGGGAAAACTCGATAAGGTACGATTTTTT
TaggctttactttttttctcagaaataaTTACCTGAAAAAGCAATTTTGG
CGGGACTTGATTTTGACGACACCCCATATCAGTTTTTAGCCGATATTATG
AGACAGGgtcattttaaattttcgacCCGCCAGCACTCCTCGAAATTCTT
CGTTACTANGgtcattttaaattttcgacCCACGAAATTCTTCGTTACTA
CGCTCCTTTAAAGCTATACTACATGACTTGGTAAAAACGGTAGGAAGCGG
TgggcgtcacgcaaaatatgttttggACTTGCCTTAACTCATCTGAGTCT
CTGGGAACCTTTCCCTACTGAAATAGTCGGCCAAGATATCGTCCTCAGTA
GAAAATTATAATAATCTTTTGCATCGCTGGaaaatcagataagcaaatcc
tcactgcagaATTGAGTGCTATTtattccatccccactgaattttctggc
taaaaatcaatggaataaaaagccataaaaaacatgggaatatcaatccc
catgaAGATTTGGTCACCACTGGCTAGTAaaattccaccgggtctgtgag
aagggggtgtatttaaatttaaagaatttatAAAGCAATTCAACGAAGTC
ACCAAAAATTATTCTCAACTAAATTCTTCAttgagaaaattcaaaaaata
gcaGGTGTAGACTGGTTTACGAAACAACGCAATGGGGACGCGTCAGTTCT
TTGTTTGGTGTTTTATTGTGACCATATCTAGGACTTATTACTCGTTATAA
TAAAAAACCGCAGTTGCATTTCCCCGTAAAATCTTTCTATCTAATTATCC
CTCTGATTTTTTACTCAGTATGATTTTCGATTGTATTTCAAACTCTTATA
GGTTCTTGATGCATCTTGTGTTGATGTTATCAAGAAAAATGTTCCCAACT
TGAAGAAATGTGTTCTCCTTGAGAATACTGGTCATGTATTGACATTTGAG
ACTCCCAAAGAAGTTGCTACTAGTCTGGATCAACTTATAAATagtttata
aaattttttaattgtaCCTTAATAGAACTGATTTTGGCGAAGagcaaaaa
tttaacaaaatctaAGTtggagaaaaattattttggcaagtaacgtaatt
tttcaatttctgctACGTGCTAGAATTAATTTTGTCGAGGCAGTCAATCT
TTAAATTTTGACGAGAactaatttggcgaattttctTCACCA

Coding sequence (CDS) from alignment at sc0000117:58076..63717+

>TCONS_00010778 ID=TCONS_00010778|Name=TCONS_00010778|organism=Clytia hemisphaerica|type=CDS|length=5742bp|location=Sequence derived from alignment at sc0000117:58076..63717+ (Clytia hemisphaerica)
ATGTTGTTGATCGTAGCATTTATTTTGTTCTTGTTGACGTTATTTGTGTA
CCTATTTCTATCATTGTATTCGAAGTATGCTGTTTTGTCTATACTATGGC
TTGTCAAGTTTCTTGGTGGATTCGAATCAAAAACGGTGAAACCATCAAAC
TCAAACCAAACTTTCTCCTACATGGAAAGAGGTCATAGATCGAAGGATCA
CAATACAGTTGTTTTCATTCACGGCTTTACTGCAACAAAAGAATcttttg
ctgacgtcagtaaATATCTATCAACGAAATATCATATCGTCTCACTGGAT
TTGCCAGGGCATGGAATGACGTCAGGAGATACACCAGATGATGTTGGAAT
AGCGTATTTTGTGGAAGAAGTGAAAAAATTTTTAGATGCTATTGGTCTTG
GTGATACAAAGATCCATTTGATTGGTGAATCAATGGGTGGACACATTGTT
GGCTATTTTGCAGCTATGTATCCAAACAGTATTGCATGTGTTACTATGGT
TTGCCCACATGGAATTTATTTCAACGAACTAAAGGAGCCAAAAGAAGTAT
TTTTACGAACAGGAAAACATTACTTGTTGCCTGAAGATTATGCTGGTGTT
AAAAATATGATGTTGTATTTGTCACATAAACAGACGTTTGTACCAGAATT
TGTATTTAAAGGAATGTTAGAGCTTAGAATGGAACGAAACAACTTCTATA
agaaagTGTTGAATAACTTATTGTTACCACCAAATGATAGACTTCTTGAA
AGTTCGTTGAAGCAAATCATCTCACCATCAATGTTAATGTGGGGAAAACT
CGATAAGGTTCTTGATGCATCTTGTGTTGATGTTATCAAGAAAAATGTTC
CCAACTTGAAGAAATGTGTTCTCCTTGAGAATACTGGTCATGTATTGACA
TTTGAGACTCCCAAAGAAGTTGCTACTAGTCTGGATCAACTTATAAATag
tttataaATGTTGTTGATCGTAGCATTTATTTTGTTCTTGTTGACGTTAT
TTGTGTACCTATTTCTATCATTGTATTCGAAGTATGCTGTTTTGTCTATA
CTATGGCTTGTCAAGTTTCTTGGTGGATTCGAATCAAAAACGGTGAAACC
ATCAAACTCAAACCAAACTTTCTCCTACATGGAAAGAGGTCATAGATCGA
AGGATCACAATACAGTTGTTTTCATTCACGGCTTTACTGCAACAAAAGAA
TcttttgctgacgtcagtaaATATCTATCAACGAAATATCATATCGTCTC
ACTGGATTTGCCAGGGCATGGAATGACGTCAGGAGATACACCAGATGATG
TTGGAATAGCGTATTTTGTGGAAGAAGTGAAAAAATTTTTAGATGCTATT
GGTCTTGGTGATACAAAGATCCATTTGATTGGTGAATCAATGGGTGGACA
CATTGTTGGCTATTTTGCAGCTATGTATCCAAACAGTATTGCATGTGTTA
CTATGGTTTGCCCACATGGAATTTATTTCAACGAACTAAAGGAGCCAAAA
GAAGTATTTTTACGAACAGGAAAACATTACTTGTTGCCTGAAGATTATGC
TGGTGTTAAAAATATGATGTTGTATTTGTCACATAAACAGACGTTTGTAC
CAGAATTTGTATTTAAAGGAATGTTAGAGCTTAGAATGGAACGAAACAAC
TTCTATAagaaagTGTTGAATAACTTATTGTTACCACCAAATGATAGACT
TCTTGAAAGTTCGTTGAAGCAAATCATCTCACCATCAATGTTAATGTGGG
GAAAACTCGATAAGGTTCTTGATGCATCTTGTGTTGATGTTATCAAGAAA
AATGTTCCCAACTTGAAGAAATGTGTTCTCCTTGAGAATACTGGTCATGT
ATTGACATTTGAGACTCCCAAAGAAGTTGCTACTAGTCTGGATCAACTTA
TAAATagtttataaATGTTGTTGATCGTAGCATTTATTTTGTTCTTGTTG
ACGTTATTTGTGTACCTATTTCTATCATTGTATTCGAAGTATGCTGTTTT
GTCTATACTATGGCTTGTCAAGTTTCTTGGTGGATTCGAATCAAAAACGG
TGAAACCATCAAACTCAAACCAAACTTTCTCCTACATGGAAAGAGGTCAT
AGATCGAAGGATCACAATACAGTTGTTTTCATTCACGGCTTTACTGCAAC
AAAAGAATcttttgctgacgtcagtaaATATCTATCAACGAAATATCATA
TCGTCTCACTGGATTTGCCAGGGCATGGAATGACGTCAGGAGATACACCA
GATGATGTTGGAATAGCGTATTTTGTGGAAGAAGTGAAAAAATTTTTAGA
TGCTATTGGTCTTGGTGATACAAAGATCCATTTGATTGGTGAATCAATGG
GTGGACACATTGTTGGCTATTTTGCAGCTATGTATCCAAACAGTATTGCA
TGTGTTACTATGGTTTGCCCACATGGAATTTATTTCAACGAACTAAAGGA
GCCAAAAGAAGTATTTTTACGAACAGGAAAACATTACTTGTTGCCTGAAG
ATTATGCTGGTGTTAAAAATATGATGTTGTATTTGTCACATAAACAGACG
TTTGTACCAGAATTTGTATTTAAAGGAATGTTAGAGCTTAGAATGGAACG
AAACAACTTCTATAagaaagTGTTGAATAACTTATTGTTACCACCAAATG
ATAGACTTCTTGAAAGTTCGTTGAAGCAAATCATCTCACCATCAATGTTA
ATGTGGGGAAAACTCGATAAGGTTCTTGATGCATCTTGTGTTGATGTTAT
CAAGAAAAATGTTCCCAACTTGAAGAAATGTGTTCTCCTTGAGAATACTG
GTCATGTATTGACATTTGAGACTCCCAAAGAAGTTGCTACTAGTCTGGAT
CAACTTATAAATagtttataaATGTTGTTGATCGTAGCATTTATTTTGTT
CTTGTTGACGTTATTTGTGTACCTATTTCTATCATTGTATTCGAAGTATG
CTGTTTTGTCTATACTATGGCTTGTCAAGTTTCTTGGTGGATTCGAATCA
AAAACGGTGAAACCATCAAACTCAAACCAAACTTTCTCCTACATGGAAAG
AGGTCATAGATCGAAGGATCACAATACAGTTGTTTTCATTCACGGCTTTA
CTGCAACAAAAGAATcttttgctgacgtcagtaaATATCTATCAACGAAA
TATCATATCGTCTCACTGGATTTGCCAGGGCATGGAATGACGTCAGGAGA
TACACCAGATGATGTTGGAATAGCGTATTTTGTGGAAGAAGTGAAAAAAT
TTTTAGATGCTATTGGTCTTGGTGATACAAAGATCCATTTGATTGGTGAA
TCAATGGGTGGACACATTGTTGGCTATTTTGCAGCTATGTATCCAAACAG
TATTGCATGTGTTACTATGGTTTGCCCACATGGAATTTATTTCAACGAAC
TAAAGGAGCCAAAAGAAGTATTTTTACGAACAGGAAAACATTACTTGTTG
CCTGAAGATTATGCTGGTGTTAAAAATATGATGTTGTATTTGTCACATAA
ACAGACGTTTGTACCAGAATTTGTATTTAAAGGAATGTTAGAGCTTAGAA
TGGAACGAAACAACTTCTATAagaaagTGTTGAATAACTTATTGTTACCA
CCAAATGATAGACTTCTTGAAAGTTCGTTGAAGCAAATCATCTCACCATC
AATGTTAATGTGGGGAAAACTCGATAAGGTTCTTGATGCATCTTGTGTTG
ATGTTATCAAGAAAAATGTTCCCAACTTGAAGAAATGTGTTCTCCTTGAG
AATACTGGTCATGTATTGACATTTGAGACTCCCAAAGAAGTTGCTACTAG
TCTGGATCAACTTATAAATagtttataaATGTTGTTGATCGTAGCATTTA
TTTTGTTCTTGTTGACGTTATTTGTGTACCTATTTCTATCATTGTATTCG
AAGTATGCTGTTTTGTCTATACTATGGCTTGTCAAGTTTCTTGGTGGATT
CGAATCAAAAACGGTGAAACCATCAAACTCAAACCAAACTTTCTCCTACA
TGGAAAGAGGTCATAGATCGAAGGATCACAATACAGTTGTTTTCATTCAC
GGCTTTACTGCAACAAAAGAATcttttgctgacgtcagtaaATATCTATC
AACGAAATATCATATCGTCTCACTGGATTTGCCAGGGCATGGAATGACGT
CAGGAGATACACCAGATGATGTTGGAATAGCGTATTTTGTGGAAGAAGTG
AAAAAATTTTTAGATGCTATTGGTCTTGGTGATACAAAGATCCATTTGAT
TGGTGAATCAATGGGTGGACACATTGTTGGCTATTTTGCAGCTATGTATC
CAAACAGTATTGCATGTGTTACTATGGTTTGCCCACATGGAATTTATTTC
AACGAACTAAAGGAGCCAAAAGAAGTATTTTTACGAACAGGAAAACATTA
CTTGTTGCCTGAAGATTATGCTGGTGTTAAAAATATGATGTTGTATTTGT
CACATAAACAGACGTTTGTACCAGAATTTGTATTTAAAGGAATGTTAGAG
CTTAGAATGGAACGAAACAACTTCTATAagaaagTGTTGAATAACTTATT
GTTACCACCAAATGATAGACTTCTTGAAAGTTCGTTGAAGCAAATCATCT
CACCATCAATGTTAATGTGGGGAAAACTCGATAAGGTTCTTGATGCATCT
TGTGTTGATGTTATCAAGAAAAATGTTCCCAACTTGAAGAAATGTGTTCT
CCTTGAGAATACTGGTCATGTATTGACATTTGAGACTCCCAAAGAAGTTG
CTACTAGTCTGGATCAACTTATAAATagtttataaATGTTGTTGATCGTA
GCATTTATTTTGTTCTTGTTGACGTTATTTGTGTACCTATTTCTATCATT
GTATTCGAAGTATGCTGTTTTGTCTATACTATGGCTTGTCAAGTTTCTTG
GTGGATTCGAATCAAAAACGGTGAAACCATCAAACTCAAACCAAACTTTC
TCCTACATGGAAAGAGGTCATAGATCGAAGGATCACAATACAGTTGTTTT
CATTCACGGCTTTACTGCAACAAAAGAATcttttgctgacgtcagtaaAT
ATCTATCAACGAAATATCATATCGTCTCACTGGATTTGCCAGGGCATGGA
ATGACGTCAGGAGATACACCAGATGATGTTGGAATAGCGTATTTTGTGGA
AGAAGTGAAAAAATTTTTAGATGCTATTGGTCTTGGTGATACAAAGATCC
ATTTGATTGGTGAATCAATGGGTGGACACATTGTTGGCTATTTTGCAGCT
ATGTATCCAAACAGTATTGCATGTGTTACTATGGTTTGCCCACATGGAAT
TTATTTCAACGAACTAAAGGAGCCAAAAGAAGTATTTTTACGAACAGGAA
AACATTACTTGTTGCCTGAAGATTATGCTGGTGTTAAAAATATGATGTTG
TATTTGTCACATAAACAGACGTTTGTACCAGAATTTGTATTTAAAGGAAT
GTTAGAGCTTAGAATGGAACGAAACAACTTCTATAagaaagTGTTGAATA
ACTTATTGTTACCACCAAATGATAGACTTCTTGAAAGTTCGTTGAAGCAA
ATCATCTCACCATCAATGTTAATGTGGGGAAAACTCGATAAGGTTCTTGA
TGCATCTTGTGTTGATGTTATCAAGAAAAATGTTCCCAACTTGAAGAAAT
GTGTTCTCCTTGAGAATACTGGTCATGTATTGACATTTGAGACTCCCAAA
GAAGTTGCTACTAGTCTGGATCAACTTATAAATagtttataa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006052XLOC_006052Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00010778-proteinTCONS_00010778-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00010778-exon-sc0000117-1491911889:58076..58307TCONS_00010778-exon-sc0000117-1491911889:58076..58307Clytia hemisphaericaexon
TCONS_00010778-exon-sc0000117-1510915933:58076..58307TCONS_00010778-exon-sc0000117-1510915933:58076..58307Clytia hemisphaericaexon
TCONS_00010778-exon-sc0000117-1575043694:58076..58307TCONS_00010778-exon-sc0000117-1575043694:58076..58307Clytia hemisphaericaexon
TCONS_00010778-exon-sc0000117-1491911889:58721..59000TCONS_00010778-exon-sc0000117-1491911889:58721..59000Clytia hemisphaericaexon
TCONS_00010778-exon-sc0000117-1510915933:58721..59000TCONS_00010778-exon-sc0000117-1510915933:58721..59000Clytia hemisphaericaexon
TCONS_00010778-exon-sc0000117-1575043694:58721..59000TCONS_00010778-exon-sc0000117-1575043694:58721..59000Clytia hemisphaericaexon
TCONS_00010778-exon-sc0000117-1491911889:59974..60106TCONS_00010778-exon-sc0000117-1491911889:59974..60106Clytia hemisphaericaexon
TCONS_00010778-exon-sc0000117-1510915933:59974..60106TCONS_00010778-exon-sc0000117-1510915933:59974..60106Clytia hemisphaericaexon
TCONS_00010778-exon-sc0000117-1575043694:59974..60106TCONS_00010778-exon-sc0000117-1575043694:59974..60106Clytia hemisphaericaexon
TCONS_00010778-exon-sc0000117-1491911889:61509..61703TCONS_00010778-exon-sc0000117-1491911889:61509..61703Clytia hemisphaericaexon
TCONS_00010778-exon-sc0000117-1510915933:61509..61703TCONS_00010778-exon-sc0000117-1510915933:61509..61703Clytia hemisphaericaexon
TCONS_00010778-exon-sc0000117-1575043694:61509..61703TCONS_00010778-exon-sc0000117-1575043694:61509..61703Clytia hemisphaericaexon
TCONS_00010778-exon-sc0000117-1491911889:62413..62513TCONS_00010778-exon-sc0000117-1491911889:62413..62513Clytia hemisphaericaexon
TCONS_00010778-exon-sc0000117-1510915933:62413..62513TCONS_00010778-exon-sc0000117-1510915933:62413..62513Clytia hemisphaericaexon
TCONS_00010778-exon-sc0000117-1575043694:62413..62513TCONS_00010778-exon-sc0000117-1575043694:62413..62513Clytia hemisphaericaexon
TCONS_00010778-exon-sc0000117-1491911889:63377..63717TCONS_00010778-exon-sc0000117-1491911889:63377..63717Clytia hemisphaericaexon
TCONS_00010778-exon-sc0000117-1510915933:63377..63717TCONS_00010778-exon-sc0000117-1510915933:63377..63717Clytia hemisphaericaexon
TCONS_00010778-exon-sc0000117-1575043694:63377..63717TCONS_00010778-exon-sc0000117-1575043694:63377..63717Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000117supercontigsc0000117:58076..63717 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	1.4028	1.47247	1.89465	1.96719	2.54587	1.51941	3.82624	2.69473	4.46842	4.57367	2.28354	3.25642	4.56922	4.34	7.35269	5.19246	3.14658	4.13595	4.08243	4.27712	0.997423	0.677394	12.8445	10.2823
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000073AB_hydrolase_1
IPR029058AB_hydrolase
Blast
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BLAST of TCONS_00010778 vs. Swiss-Prot (Human)
Match: ABHD6 (Monoacylglycerol lipase ABHD6 OS=Homo sapiens GN=ABHD6 PE=1 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 8.165e-42
Identity = 86/294 (29.25%), Postives = 161/294 (54.76%), Query Frame = 3 
Query:  231 WLVKFLGGFESKTVKPSNSNQTFSYMERGHRSKDHNTVVFIHGFTATKESFADVSKYLSTKYHIVSLDLPGHGMTSGDTPDDVGIAYFVEEVKKFLDAIGLGDTKIHLIGESMGGHIVGYFAAMYPNSIACVTMVCPHGIYFNE----LKEPKEVFLRTG--KHYLLPEDYAGVKNMMLYLSHKQTFVPEFVFKGMLELRMERNNFYKKVXXXXXXXXXXXXXESSLKQIISPSMLMWGKLDKVLDASCVDVIKKNVPNLKKCVLLENTGHVLTFETPKEVATSLDQLINSL*N 1094
            W  +   G + + V   + +  F Y  RG R     +++ +HGF+A K+ +  V K+L    H+V +D+PGH  T+  + DD+ I   V+ + +F++ + L     HL+G SMGG + G +AA YP+ ++ + +VCP G+ ++     ++  KE+       K  L+P     +  M+   S+ +  VP+ + +G++++R+  NNFY+K+   ++   +   L  ++ +I  P+ ++WGK D+VLD S  D++ K++ N  +  LLEN GH +  E P++ A  +   + S+ N
Sbjct:   40 WYWRRTLGMQVRYVH--HEDYQFCYSFRG-RPGHKPSILMLHGFSAHKDMWLSVVKFLPKNLHLVCVDMPGHEGTTRSSLDDLSIDGQVKRIHQFVECLKLNKKPFHLVGTSMGGQVAGVYAAYYPSDVSSLCLVCPAGLQYSTDNQFVQRLKELQGSAAVEKIPLIPSTPEEMSEMLQLCSYVRFKVPQQILQGLVDVRIPHNNFYRKLFLEIVSEKSRYSLHQNMDKIKVPTQIIWGKQDQVLDVSGADMLAKSIANC-QVELLENCGHSVVMERPRKTAKLIIDFLASVHN 329
The following BLAST results are available for this feature:
BLAST of TCONS_00010778 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ABHD68.165e-4229.25Monoacylglycerol lipase ABHD6 OS=Homo sapiens GN=A... [more]
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