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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00011134 ID=TCONS_00011134|Name=TCONS_00011134|organism=Clytia hemisphaerica|type=transcript|length=1077bp
ATTATATCTAACTTTTCgtaatttatataaaaaggaattttgttCATCTA
GTCTTGTACAGCTGATGATTGTATTAACATGAAACTTGAAGTACTGTAAA
GCaaattatgtaatttttttctgaaaattgtatcatgctCCCTCGCCTTG
CNTGCaaattatgtaatttttttctgaaaattgtatTATGCTCACTCGCC
TTGCAGAGCACTCTTGAAGCATCGATTAAACTTGAAAACATATTAGATAG
AATACGAAATTATGAGATCACTTCATCTCTTTTTACTTCAAGACTTTTGA
TGGTTTCAGAATGAATATTTTCGGACTTTCTTTTGTTCTGTGGTTTTTAA
AATTATCGGTTGGTTGCATATTCTAGAGGAAGATGGACGAGGAAAACGTT
TTACTGAATTCGAACTCTGAAAAGCAAGAAGCGCAGGAAACAATTGAAAT
TATTCGAATAAAACATCGTTTTTACGAGATCAACAAACAAACATTGCCCG
CAAAATTATGTTATTTGTTTGACGTGGGGCGAAAAATGATGACCCAAGCT
ATGCTCATCTTATTTGTGGTCCAAACTGGACTTCAGAAAGATGAGGCTGG
TCTGTTAATTGGCTTCAGGAACATCGGATCACTCATCGCCGGGCCGTTCT
GGGGTTGGCTTGCTGATCGTTTCCATAACCACCGAACGCTTCTTGTCATC
ATGGCCATAGGAAGTATTGTAACCATGGGAAGCCAACCACTTCTATCCAT
GCAATTTGGTAACCCTGAAACCAATGTCTGTCCAGCACCTACTGTAGATA
CGTTGTCCAGTATTTTCAAGCCAAATGGGTGTCCACCCGGGTCTGTAAAT
TGTACATCCAATTCTACTATCTTCAATACGACCACTACAGCATCACTAAC
TGGTGTATACCAATACAAGCCATACGgatctttatttttcgtcatgtttt
tcacacaaatagCAGTCATGTTTTTCGAAGCCAGCAGTGAACCGTTTACC
GATTGCGGCGTGTTACGTCGTGCCGAACTGAGCCCGCACCGTAAAATCGA
TTACGGAAGACAACGCTTCTTTGGTGC Run BLAST on NCBI transcript from alignment at sc0000121:460766..465732- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00011134 ID=TCONS_00011134|Name=TCONS_00011134|organism=Clytia hemisphaerica|type=transcript|length=4967bp|location=Sequence derived from alignment at sc0000121:460766..465732- (Clytia hemisphaerica)
ATTATATCTAACTTTTCGTAATTTATATAAAAAGGAATTTTGTTCATCTA
GTCTTGTACAGCTGATGATTGTATTAACATGAAACTTGAAGTACTGTAAA
GCAAATTATGTAATTTTTTTCTGAAAATTGTATCATGCTCCCTCGCCTTG
CNTGCAAATTATGTAATTTTTTTCTGAAAATTGTATTATGCTCACTCGCC
TTGCAGAGCACTCTTGAAGCATCGATTAAACTTGAAAACATATTAGATAG
AATACGAAATTATGAGATCACTTCATCTCTTTTTACTTCAAGACTTTTGA
TGGTTTCAGAATGAATATTTTCGGACTTTCTTTTGTTCTGTGGTTTTTAA
AATTATCGGTTGGTTGCATATTCTAGAGGAAGATGGACGAGGAAAACGTT
TTACTGAATTCGAACTCTGAAAAGCAAGAAGCGCAGGAAACAATTGAAAT
TATTCGAATAAAACATCGTTTTTACGAGATCAACAAACAAACATTGCCCG
CAAAATTATGTTATTTGTTTGACGTGGGGCGAAAAATGATGACCCAAGCT
ATGCTCATCTTATTTGTGGTCCAAACTGGACTTCAGAAAGATGAGGCTGG
TCTGTTAATTGGCTTCAGGTGTGTAAAAGAAAAATGTTATGTATCAATTA
ATTTGCACACTTTTCATAAGAATATTTGCACACTTTACGAATAATTATGC
CAAAAATATTTAAGAATATCACTACAATGAAATTCGCTAACTGAGGAGGT
TTTGCCCTTTTAAGCGAATTTTTACCTGGAATTGCCAATATTCTTCATCA
CTGTCAAGACTTTCACAAAAACAGCATCATTTTTGCTTTTGCTTTGAATT
TAGGTTTGTTTTGGATCTTAACCTAATAATACTGTTCAGATTATTCAAGC
ATGATTACTATCAAAAAGTTAAGGATATTCTTATAAAAAAGTTTATTGTG
CACTGAGTAGAAGCAACCTTTGAACACATAAAGAATTTTGATTGATTAAA
AAGCGATTAATTTCCCATATTTACAACTGTCAAATATTTTCAAATTTAAC
CTTGAAAATCTATCTTTAAAATATTTTATGGGAATCTAAGACCTTTTTAG
TTCCCTCCTTTCCTGACTTGTTTGAAATACATTGAGGTCTCCGCAACTCG
TGAATGAAATTTTTTCAAGTTATAGAAAATTCGACTTGGTTTGGTTTATA
AAGGTTCCTTATATATTGGCACCAGAAATAACTTGTTTAAGTTAAAAAGA
TATTCGAGTTATACCAAGTTAGAGTTATGGAGATTATAAATATCGGTCAT
ATAAACCAATTGAACAAGGTAAAATATATTAATTAATGGTCATTATTTAA
AATAAGTATATGTAATCACATGATAACGAGTGCAATTCGAGAATAATTGC
ACGAATGATTTTTTTGTTATTAATTTGAAATTAATTAAATTTGAAACAAA
AAAAATCACGAGTGCAATTTTCGAATTGTACGAGTTATTGGGTGATTACG
ATCTAATCGCACAATTTTTTAACTACTTTTTCCCCGTCAGGAAAATAAAT
TACACTGAAAGTTTTACATTTTTCTCTTCTCTTTATGTTTTTCTTTTGTT
GTTTGCTTAAAGATTTTCTTTCTCAAAAAATGAATTTCGAATGCAATTAA
AACGTTCGATAAAAAAATGTAAGAAAAAACTTTAAAATCAATTTTGTAAA
CATTGGCACCTCATTGAAGAGTGTGATTAACGATTAATTGCTCTCTACAG
GATACAATTAACGATTAATTGCTCTCTTTGAAGGGGCNTTTACGGCCAAA
AAATTTTTTCCAGAAAAAACAGCTTGAGTTACATTTAAGAGATAATTGCC
TTTTATCTTTGTCCAAAAAATTTGAAAAAACTAATGAAGCAATTTCACAC
AAAGTCTAAAAAACCCCATTTTTAGGCACATTTTGGCCCAAATTTGCCCC
AAAAAATTATTTTTTGAAAATCGGACTTCATCAGATTCTAAATATTACCA
TATTACACCAAAGTACAAAAAAATCAGAAAAAAATATCGATCCAATCGCC
AGAAACGCTCTTTTTCCCTAAAAATGACATAAGGGAATTTCCCCAAATAA
GAAAAACCGATTTTTACGGCCAAAAAAAAATTTCCGAAAAAAACTGCTTC
AGTCACGTTTTAGAGAACCTTGCCCTTCATCTTTCTGCCAAAAATCAGGA
AAAACTAATGAAGCAATTTTGCACAGTCCACAAAAAACTTATTTTTAGGT
AGTTTTTGGGCCAACTTGCTCCCAAAATTTTTTTTTCAAAAATCGGGTTC
CGTCACTTTTTAGGCATTGCTATTTTGTATCATTGTGCAAAAAATTAAAA
AAAACTAATGAGCCAATCCCGAGAAAAGCTGCTAACAGGAAAATGGTAAA
AGAGAATTTCCCCAGAAAACGAAAATCCGTATTTTACGACGAAAAAAAAT
TTTCCGAGAAAAATTACTTCAGCCACATTTTAGGGTACCTTGCACTCTAT
CTTTCTGCGAAGAATCAGGAAAAACTAATGAAGCAATTTTGCGCAAAGTC
CAAAAAGCCTTATTTTTAGGTAGTTTTTGGCCCAAATTTGCCCCCCAAAT
TTTTTTTTCAAAAATCGGGCTCCGTTACTTTTCAGGCATTGCTATTTTGT
ATCATTGTGCAAAAAATTAAAAAAAACTAATGAGCCAATCCCGAGAAAAG
CTTGTAACAGACGAACGGACAACGGTCAAATTAAAGGACCTCCCGGTAGG
TCCAAAAATAACTCATTGTGCGATTAAGTCTGTAATTGGATGAATTTGTA
AACAGTCATAGACAGCCAGTATGATTTCCTGTTTTTCAATATGAGAAAAA
CGATTAAGAAGTCACCACGTTGAATATGTAATATACAGGTGTACACACTT
TTGATTGCAAACACTTTGTTTAGTGTGTCTTAAATCTAAAAAAGATAAGT
TATGTCGGACGAAAGTGACTTAATAACTGCAGAAGTGAAGTTGATTGGTC
AGAAACTAGGTGACCACGAATATGATATTGGTCAAATGAATATAGTCGAA
CAACGTTCAAAACGACATTGGTATGAAATCAATGGAGATGTTTTAGGAGC
AAAATTTAGTTATTTTTGTGAAGGTGGACGTATAGTGAGTAATGGTGCTA
TGCTAGGATTGTTTTTGACACAAATCGGCCTTACTAAACTTGAAGTAGGC
TTAGTGTTGGGCACAAGGTGAGTGTACAACATGATTTGGGCCACTTTTTT
ATAAGAACAAACTATAGGCAAAAAAAAATTAAAGCATTCTAACAACATTT
TAAGGTTTTGCGGGCTTTACAACATTGCATCAAGGATTTAGAGCATTTCA
AGAACATTTTAAGGCTTAAAACCCAAAATTTAAGTACATTCGAAGGGTTC
AAATTGTTTTCGCCGTTCTTATAAAAAAAATCCTGCATCTATGCAATAAG
GCAAAGATATCTTTGTGTGGCAAAAAGTGACGTAAATTCTTGAGCCATTG
TAGAGCAGTGAGGAAAGTTAGTAGTTCAACAAAACCCAGGAGAAGCGAAT
CATTTAGGTGTCAATAAAGTGCAGATGAACTACTAGGCTACATTACTTCC
GTTTTGTTTTCTGACAAAATGATTGACTGGCTATTTTTAAGTATTACATT
AATATCAGAGGAAAAGAAATAGGCTCTAAACTTTTTCATTTAGTCAAGAA
TATCAACAACTTTCTCTTTTTATTTAGGAACATCGGATCACTCATCGCCG
GGCCGTTCTGGGGTTGGCTTGCTGATCGTTTCCATAACCACCGAACGCTT
CTTGTCATCATGGCCATAGGAAGTATTGTAACCATGGGAAGCCAACCACT
TCTATCCATGCAATTTGGTAACCCTGAAACCAATGTCTGTCCAGCACCTA
CTGTAGATACGTTGTCCAGTATTTTCAAGCCAAATGGGTGTCCACCCGGG
TCTGTAAATTGTACATCCAATTCTACTATCTTCAATACGACCACTACAGC
ATCACTAACTGGTGTATACCAATACAAGCCATACGGATCTTTATTTTTCG
TCATGTTTTTCACACAAATAGCAGTCATGTTTTTCGAAGCCAGCAGTGAA
CCGTTTACCGATTGCGGCGTGTTACGTCGTGCCGAACTGAGCCCGCACCG
TAAAATTGATTACGGAAGACAACGCTTCTTTGGTGCGTTCGGCGTCATTA
CTTGCGTTACGTTATCTAACGTATTCGCGGATAACTTCCCGAAAGCCAAC
GTGACATGTTATACAGCTTTGTTTATCATGTACGTCATNTAGGAAAGTTA
GTAGTTCAATAAAACCCAGGAGAAGCGAATCATTTAGGTGTCAATAATAG
TGCAGATGAACTACTAGGCTACATTACTTCCGTTTTGTTTTCTGACAAAA
TGATTGACTGGCTATTTTTAAGTATTACATTAATATCAGAGGAAAAGAAA
TAGGCTCTAAACTTTTTCATTTAGTCAAGAATATCAACAACTTTCTCTTT
TTATTTAGGAACATCGGATCACTCATCGCCGGGCCGTTCTGGGGTTGGCT
TGCTGATCGTTTCCATAACCACCGAACGCTTCTTGTCATCATGGCCATAG
GAAGTATTGTAACCATGGGAAGCCAACCACTTCTATCCATGCAATTTGGT
AACCCTGAAACCAATGTCTGTCCAGCACCTACTGTAGATACGTTGTCCAG
TATTTTCAAGCCAAATGGGTGTCCACCCGGGTCTGTAAATTGTACATCCA
ATTCTACTATCTTCAATACGACCACTACAGCATCACTAACTGGTGTATAC
CAATACAAGCCATACGGATCTTTATTTTTCGTCATGTTTTTCACACAAAT
AGCAGTCATGTTTTTCGAAGCCAGCAGTGAACCGTTTACCGATTGCGGCG
TGTTACGTCGTGCCGAACTGAGCCCGCACCGTAAAATCGATTACGGAAGA
CAACGCTTCTTTGGTGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00011134-exon-sc0000121-1575043694:465115..465732 | TCONS_00011134-exon-sc0000121-1575043694:465115..465732 | Clytia hemisphaerica | exon |
| TCONS_00011134-exon-sc0000121-1575043694:460766..461224 | TCONS_00011134-exon-sc0000121-1575043694:460766..461224 | Clytia hemisphaerica | exon |
| TCONS_00011134-exon-sc0000121-1510915933:465115..465732 | TCONS_00011134-exon-sc0000121-1510915933:465115..465732 | Clytia hemisphaerica | exon |
| TCONS_00011134-exon-sc0000121-1510915933:460766..461224 | TCONS_00011134-exon-sc0000121-1510915933:460766..461224 | Clytia hemisphaerica | exon |
| TCONS_00011134-exon-sc0000121-1491911889:465115..465732 | TCONS_00011134-exon-sc0000121-1491911889:465115..465732 | Clytia hemisphaerica | exon |
| TCONS_00011134-exon-sc0000121-1491911889:460766..461224 | TCONS_00011134-exon-sc0000121-1491911889:460766..461224 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000121 | supercontig | sc0000121:460766..465732 - |
Blast
The following BLAST results are available for this feature:
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