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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00011148 ID=TCONS_00011148|Name=TCONS_00011148|organism=Clytia hemisphaerica|type=transcript|length=889bp
GAGACAACAAGTTGATGCCAGTGCCACATTTGCTGCAACGGAATCACCTC
TCTCTCAACAAGATAAAATTGTTGAACAGCAAAGTATTGTTGGTACAAAC
CCAACCGAATCAAGCATTCAGCAAAAAGATGAAGGAATTCAACAAAATGA
AACACCCACAGAAGCATCAACCGAAAGCAGCCTCCAACAAAAAGACTTGA
CAACTCAACAAGGTTTAACAACACCTACAGAATCATCGATGCCACAGTTC
GTACCGTCTCCTTCACAAGAGTTAGGATCTAAAAGTGAATCAGTGGAGCC
TACGGAAGCCTCATCACAGCAACAACAACCACAACAGCAAGATTTGATAC
AAGAGAGCGAGCAACGTGAGCAGGTAGAGGAACAACACATCACTGAAGAA
GAAAACAACATGCATCCAGACGAACCAATGGAAGAAGCTGCTAACACCAA
AGATAACATTTTCTCTTTCAATCATCCAGCCAATCAGATCAAAGAATACA
CACTGAATGATACAAAGTCAGACGGTATCAAAGAATTCAATAACGAAACT
GTTTCCGCGGAACAATCAAAGGAAGAGGAAAGCATGGAAGCGGAACAAAT
GAGTCCTTCAGATGAGGAACAAACGGAACAGAAATCTTCCGCCCAAAACA
AAGGAGTTGaacaaaaagtagaaacatCCAAACCCGTTACACCCAAAGTA
GAAGTTAGCCATTTAACTGCGGAACAAGGGGAATTGGAAAGTTTCACAGA
TGCTGTGAACGATCGTCACCAGGAGGAGGAAAGTGTGTACAAAGGGATTT
TGAGTGACAAAGGATCAACAACTTCCAATGTTAAAGAAACAAGTGAAGAT
GTAGGTGTTGAGAAAGAATTCACGTTGAGTGAGCAGAAA Run BLAST on NCBI protein sequence of TCONS_00011148-protein >TCONS_00011148-protein ID=TCONS_00011148-protein|Name=TCONS_00011148-protein|organism=Clytia hemisphaerica|type=polypeptide|length=296bp
RQQVDASATFAATESPLSQQDKIVEQQSIVGTNPTESSIQQKDEGIQQNE
TPTEASTESSLQQKDLTTQQGLTTPTESSMPQFVPSPSQELGSKSESVEP
TEASSQQQQPQQQDLIQESEQREQVEEQHITEEENNMHPDEPMEEAANTK
DNIFSFNHPANQIKEYTLNDTKSDGIKEFNNETVSAEQSKEEESMEAEQM
SPSDEEQTEQKSSAQNKGVEQKVETSKPVTPKVEVSHLTAEQGELESFTD
AVNDRHQEEESVYKGILSDKGSTTSNVKETSEDVGVEKEFTLSEQK Run BLAST on NCBI transcript from alignment at sc0000121:352856..353744 Legend: exonCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00011148 ID=TCONS_00011148|Name=TCONS_00011148|organism=Clytia hemisphaerica|type=transcript|length=889bp|location=Sequence derived from alignment at sc0000121:352856..353744 (Clytia hemisphaerica)
TTTCTGCTCACTCAACGTGAATTCTTTCTCAACACCTACATCTTCACTTG
TTTCTTTAACATTGGAAGTTGTTGATCCTTTGTCACTCAAAATCCCTTTG
TACACACTTTCCTCCTCCTGGTGACGATCGTTCACAGCATCTGTGAAACT
TTCCAATTCCCCTTGTTCCGCAGTTAAATGGCTAACTTCTACTTTGGGTG
TAACGGGTTTGGatgtttctactttttgttCAACTCCTTTGTTTTGGGCG
GAAGATTTCTGTTCCGTTTGTTCCTCATCTGAAGGACTCATTTGTTCCGC
TTCCATGCTTTCCTCTTCCTTTGATTGTTCCGCGGAAACAGTTTCGTTAT
TGAATTCTTTGATACCGTCTGACTTTGTATCATTCAGTGTGTATTCTTTG
ATCTGATTGGCTGGATGATTGAAAGAGAAAATGTTATCTTTGGTGTTAGC
AGCTTCTTCCATTGGTTCGTCTGGATGCATGTTGTTTTCTTCTTCAGTGA
TGTGTTGTTCCTCTACCTGCTCACGTTGCTCGCTCTCTTGTATCAAATCT
TGCTGTTGTGGTTGTTGTTGCTGTGATGAGGCTTCCGTAGGCTCCACTGA
TTCACTTTTAGATCCTAACTCTTGTGAAGGAGACGGTACGAACTGTGGCA
TCGATGATTCTGTAGGTGTTGTTAAACCTTGTTGAGTTGTCAAGTCTTTT
TGTTGGAGGCTGCTTTCGGTTGATGCTTCTGTGGGTGTTTCATTTTGTTG
AATTCCTTCATCTTTTTGCTGAATGCTTGATTCGGTTGGGTTTGTACCAA
CAATACTTTGCTGTTCAACAATTTTATCTTGTTGAGAGAGAGGTGATTCC
GTTGCAGCAAATGTGGCACTGGCATCAACTTGTTGTCTC Coding sequence (CDS) from alignment at sc0000121:352856..353744 >TCONS_00011148 ID=TCONS_00011148|Name=TCONS_00011148|organism=Clytia hemisphaerica|type=CDS|length=888bp|location=Sequence derived from alignment at sc0000121:352856..353744 (Clytia hemisphaerica)
TTTCTGCTCACTCAACGTGAATTCTTTCTCAACACCTACATCTTCACTTG
TTTCTTTAACATTGGAAGTTGTTGATCCTTTGTCACTCAAAATCCCTTTG
TACACACTTTCCTCCTCCTGGTGACGATCGTTCACAGCATCTGTGAAACT
TTCCAATTCCCCTTGTTCCGCAGTTAAATGGCTAACTTCTACTTTGGGTG
TAACGGGTTTGGatgtttctactttttgttCAACTCCTTTGTTTTGGGCG
GAAGATTTCTGTTCCGTTTGTTCCTCATCTGAAGGACTCATTTGTTCCGC
TTCCATGCTTTCCTCTTCCTTTGATTGTTCCGCGGAAACAGTTTCGTTAT
TGAATTCTTTGATACCGTCTGACTTTGTATCATTCAGTGTGTATTCTTTG
ATCTGATTGGCTGGATGATTGAAAGAGAAAATGTTATCTTTGGTGTTAGC
AGCTTCTTCCATTGGTTCGTCTGGATGCATGTTGTTTTCTTCTTCAGTGA
TGTGTTGTTCCTCTACCTGCTCACGTTGCTCGCTCTCTTGTATCAAATCT
TGCTGTTGTGGTTGTTGTTGCTGTGATGAGGCTTCCGTAGGCTCCACTGA
TTCACTTTTAGATCCTAACTCTTGTGAAGGAGACGGTACGAACTGTGGCA
TCGATGATTCTGTAGGTGTTGTTAAACCTTGTTGAGTTGTCAAGTCTTTT
TGTTGGAGGCTGCTTTCGGTTGATGCTTCTGTGGGTGTTTCATTTTGTTG
AATTCCTTCATCTTTTTGCTGAATGCTTGATTCGGTTGGGTTTGTACCAA
CAATACTTTGCTGTTCAACAATTTTATCTTGTTGAGAGAGAGGTGATTCC
GTTGCAGCAAATGTGGCACTGGCATCAACTTGTTGTCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00011148-exon-sc0000121-1491911889:352856..353744 | TCONS_00011148-exon-sc0000121-1491911889:352856..353744 | Clytia hemisphaerica | exon |
| TCONS_00011148-exon-sc0000121-1510915933:352856..353744 | TCONS_00011148-exon-sc0000121-1510915933:352856..353744 | Clytia hemisphaerica | exon |
| TCONS_00011148-exon-sc0000121-1575043694:352856..353744 | TCONS_00011148-exon-sc0000121-1575043694:352856..353744 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000121 | supercontig | sc0000121:352856..353744 . |
Blast
The following BLAST results are available for this feature:
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