TCONS_00011256 (transcript) - C. hemisphaerica

Overview
NameTCONS_00011256
Unique NameTCONS_00011256
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length331

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00011256 ID=TCONS_00011256|Name=TCONS_00011256|organism=Clytia hemisphaerica|type=transcript|length=331bp
TAAAAAAGTGTGCAAACCAGGTCTCGAGTTTCATATCTGGCAGGTGTTCC
TTCTTCTACTTCTTTGCATTCCAAGATATCAATATCACCTTTTTAGGAAG
GGATCGCGATGTCTCTTTAAAATCAAACTAAACTTTCTGGAACGTTATAA
CATAATGTCGAAGAAGTTGAAGGATGACcagtcaataaaaatttttcagt
aAAGAATTGAGAACTTAAAGCAGTAGCGGTTGTCCAGAAGATAGatcttt
atataatttttgagaaCGGTTTGAAGTTCAGCGGTTGTGTGACATCAGGT
TCTTACTCAGGCTGATTTGTACGTACAATAT
Run BLAST on NCBI

transcript from alignment at sc0000122:444735..445065

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00011256 ID=TCONS_00011256|Name=TCONS_00011256|organism=Clytia hemisphaerica|type=transcript|length=331bp|location=Sequence derived from alignment at sc0000122:444735..445065 (Clytia hemisphaerica)
ATATTGTACGTACAAATCAGCCTGAGTAAGAACCTGATGTCACACAACCG
CTGAACTTCAAACCGttctcaaaaattatataaagatCTATCTTCTGGAC
AACCGCTACTGCTTTAAGTTCTCAATTCTTtactgaaaaatttttattga
ctgGTCATCCTTCAACTTCTTCGACATTATGTTATAACGTTCCAGAAAGT
TTAGTTTGATTTTAAAGAGACATCGCGATCCCTTCCTAAAAAGGTGATAT
TGATATCTTGGAATGCAAAGAAGTAGAAGAAGGAACACCTGCCAGATATG
AAACTCGAGACCTGGTTTGCACACTTTTTTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006307XLOC_006307Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011256-exon-sc0000122-1491911889:444735..445065TCONS_00011256-exon-sc0000122-1491911889:444735..445065Clytia hemisphaericaexon
TCONS_00011256-exon-sc0000122-1510915933:444735..445065TCONS_00011256-exon-sc0000122-1510915933:444735..445065Clytia hemisphaericaexon
TCONS_00011256-exon-sc0000122-1575043694:444735..445065TCONS_00011256-exon-sc0000122-1575043694:444735..445065Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000122supercontigsc0000122:444735..445065 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.58015	1.74645	0.225296	1.29161	15.0129	12.7949	19.2089	15.6102	6.50511	5.0179	8.0115	9.91898	11.4266	11.8547	6.06443	6.30938	6.14912	6.28257	18.8983	15.7917	10.3937	16.6704	9.91727	9.62131	9.83904	22.8742	20.6475	16.7708	25.4739	18.274
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00011256 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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