TCONS_00011293 (transcript) - C. hemisphaerica

Overview
NameTCONS_00011293
Unique NameTCONS_00011293
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2466

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00011293 ID=TCONS_00011293|Name=TCONS_00011293|organism=Clytia hemisphaerica|type=transcript|length=2466bp
TCTCAATAAAATGTGATTTTCTACAATGGCTAATGAATTGCTAGCTTCCA
AAATTCAACTATTTTATCTTCTCCTTATGTCGACTTTATGCCACGCTGCT
ACAATTACAGTTGACAGGAATTATGATGATCTCAACGACCGATTCACCTT
AGGATCTAAGAACCCTTGGGATTATCAATGCAATGAAGGTGATATGTGTT
CCTGTTATTACCGTGGAACATATTCGAGTCCTGAAAATAAACAAGCACGA
TGCTATGGAAATGGGCAATATCtgCCGAATTCGAAAGAATTTCTCACTTA
CACTAACAGTCTAGATGTTCGTATTGGGGATGCAAAGATCAAGAAAATTT
GGTTCTGGAATTTGAAAAGAGGAACAGAAAGAggaatttatgaaaaaaat
tattctgaatctgcaataaaatattttgaagtggACTCCGGTTATATGAT
TGTCACAGGATTACCAGCAAACTGGGCAGGACAGCTTGTTATTGCAGTGT
TAAACACAGGAAAACACATCGTCTTCAAAGTCACTGGCACAATAACATAT
CCTTTCGACTTCGAAAGTATTTTCACAAAACCAACTACCACTACAACTGc
aactacaacaacaacaacaactgcTGCTCCAACTACCACCACGACTGATG
TCCCAAAAACCACGTCCTCAATAgctacaacaacaaaaacaaaaacaaca
acaacaacagcccCCTTGATAACTACAACCACAGTATCCTCCTCTACTAC
TCAAACTAAAGAAACAACAACCAAACCTACTACTGTACAAACTACATTGG
CAACATTAGCAACAACAATGGTGACAACAACACCAACCATAACACCAGCA
ACGACAAAAGCCAAAGTAACAACGACTGCCAATGAATCAGCAGCCACAAG
TCCTAAGGCCACAACTCCTACCAAATTACCGACCACAGCAAATAaagaaa
caacaacaacgactAAAGTAACAGCTACTGACCAAAAATTGTCcacagaa
aaaacaacaaagattaCAACGACTTCCCAAATAGAAACAAACCCAACAAA
TCCTTTGCTACTATCTACAACAAGTTCTACTCAAACACATTCTACATCTA
CTGCAAAAACACGATCAACATCTTCACCAACAACACCAGAAGTTAATTCA
ACGATACCAACGACCACTCAACCAACAAATGAAGAAGAGACCACAACAAA
GATACCAGCTTTGCCATCGACAGGTGGCaaacaaatcaaagaaaaagaag
aaactctGGGAATGGGTATTATAATAGCACTATCAATTATCTCTTTGGCT
GTTCTAGTGCTGGTCCTCATTGTTTTTATCCTGTGTCGTCGGAGAAAGAG
AAATGAAAAAGATAAAGAAAGCAACGAACAAGAAGTAAAAACAGAAACAA
TTACGTCATCAAACATTGGGAAACCCATGCTTTTGGGTAACAAACAGGGA
AATGATTTGCATCAAATGAACTCTTACGAAGATCCAACTCTTATGTTTGC
CTCTATGGAAGGTAAAGAAGATACAAATTTTTCTTCGCCCGATGGTAACA
TTTACGAGGACATCAAAGATGATCAACCACCACAAAAACCTAGACGTCGA
GGTGATATATTAGACGAAGTGGTCCCTTATCAGTATGGAAACGTAGGAAT
GAATCTTCAAGATGAGTCGTATACGGCAGAAGATGAAGATCTTGATTATG
AGGGGCTGGATTTCAATGAAGATAATCATACAGTTCCAGAATTCAATGAT
GACTATCAAGACTTGAATGTAACCATAAAATAACTGAGGGACAAGACGAA
GCCCAACCAACAGAGGATATTGATTATGAGGggttgaatacaccttttcc
gagatgttgattctttaaaggtTTTCAAATCACATCAAAGTTTATGATTG
TATTATAGAGAAGAATTAATCCTGGAAAGTTGGGCTCAAAAGCTCTTTTC
TATCACTGTTTATGGTTATGTTTATTCATGGTAAAATGTCTTATAAAAAT
CGAAACATACAGCCCGGCCTCGTTTTCATTTAATTCTATTGTTCAGAATA
AAAGTTTAAttcaaaataactcaaaaaccGGAAGACCTTTTTAGATAAtc
ctttttttattcattttgtattttgttgcaGGTTTTTATTTTGCCAAAAT
GAAACACTGTAACAAAAAAGTCGAAAACatctcgggaaaggtgtatttcc
ATGAGTTTTGTTGGTTTGTAAAATTAAATGGTAACTATCATTAACACAGT
ACCGAGTACAATATTGGACATATTTTTCCGAGTCCACAGCAGAAAATGAA
GATCTAGATTATGAGGGGCTGAATTTCAATGAAGATAATTATACAGTGCC
AGAATTAAATGATGACTATCAAGACTTGAACGTAGCCATAAAATAACTGA
GATACTGATTATAATTTTGAAATCTATAATAATATGTAGGGCTCATCtgg
atttttatccccattg
Run BLAST on NCBI

protein sequence of TCONS_00011293-protein

>TCONS_00011293-protein ID=TCONS_00011293-protein|Name=TCONS_00011293-protein|organism=Clytia hemisphaerica|type=polypeptide|length=585bp
MANELLASKIQLFYLLLMSTLCHAATITVDRNYDDLNDRFTLGSKNPWDY
QCNEGDMCSCYYRGTYSSPENKQARCYGNGQYLPNSKEFLTYTNSLDVRI
GDAKIKKIWFWNLKRGTERGIYEKNYSESAIKYFEVDSGYMIVTGLPANW
AGQLVIAVLNTGKHIVFKVTGTITYPFDFESIFTKPTTTTTATTTTTTTA
APTTTTTDVPKTTSSIATTTKTKTTTTTAPLITTTTVSSSTTQTKETTTK
PTTVQTTLATLATTMVTTTPTITPATTKAKVTTTANESAATSPKATTPTK
LPTTANKETTTTTKVTATDQKLSTEKTTKITTTSQIETNPTNPLLLSTTS
STQTHSTSTAKTRSTSSPTTPEVNSTIPTTTQPTNEEETTTKIPALPSTG
GKQIKEKEETLGMGIIIALSIISLAVLVLVLIVFILCRRRKRNEKDKESN
EQEVKTETITSSNIGKPMLLGNKQGNDLHQMNSYEDPTLMFASMEGKEDT
NFSSPDGNIYEDIKDDQPPQKPRRRGDILDEVVPYQYGNVGMNLQDESYT
AEDEDLDYEGLDFNEDNHTVPEFNDDYQDLNVTIK
Run BLAST on NCBI

transcript from alignment at sc0000124:68958..78812-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00011293 ID=TCONS_00011293|Name=TCONS_00011293|organism=Clytia hemisphaerica|type=transcript|length=9855bp|location=Sequence derived from alignment at sc0000124:68958..78812- (Clytia hemisphaerica)
TCTCAATAAAATGTGATTTTCTACAATGGCTAATGAATTGCTAGCTTCCA
AAATTCAACTATTTTATCTTCTCCTTATGTCGACTTTATGCCACGCTGCT
ACAATTACAGTTGACAGGAATTATGATGATCTCAACGACCGATTCACCTT
AGGTAAGATTAAAGGTTTTATTTTTACATAAGTGTTCCCGTTTCATATCA
GACACATATTTCATATCGGGACAGTGTCTTCTTATTGTTATGTTATATGC
TGATATAAGCAAAAAATGTTTTCTTTTCCTCTATCTGACAAATCTTGCTT
CATATCCGTGTCAATCCAATGTGCAAAAGCTTGTGAAATAAAATTGATGA
GTAAGCAAACAATATCGCTCTTTTTTAAAAACAAAACCTTTAATTCACGT
TCGTAATTACTGTAAAGGCTTGGGGATGATGCAATGCAAAAGGATAAAAA
TTGATTCGAATCAATTTTGCTCCATTATCCCAAGAACAAAAGTGAGAGAC
ACACAAATGTTATCAAAGTGTGGTCGATTTCACTTTTAATGGTAGAAAGA
AAAAACACGACAAGACACGAGGAAGCGTTTCAGGTTGGTGGGATAGAGCA
TATTGCTTTGCACCAACGCGAAAAAAAACTTCTCGTGTCCCTAAGCCTTA
ATATTCCTTTTCTTTTTTTAGAATCTTATCCAAAAGTGGATTACTCAAAA
TGATTTGGAACATTTTCGTATCAAAATGTCTTTCATAAGTCTCAGAAGAG
TTTTAAACAACTGGAAATAGAAAATTATACAAACTACTTGATCTTAACAT
GAGGATATGTGCTCTCCATCTTCGATTCTTTGGATATTAATGATATTGAA
ACATGCGCGATAAAAATTTACAGTTTGTCTCCACAGCTTAATTTTCAGAG
AAAGCTTAGCTCTGGTGTTCACGGTATTTTAGGGGTCACATTTAAGGCTT
TCCAGACTCTAAAGACACTTCACTCTTTGGGAAAATTGACAAAAGTACTC
AAAAAATGATTAAAGTAAGAACATGTTAAAAGCATTTTTGGCTATGAAAC
TAGAAAAATCAAAGCATACCCAAATTCTTAGAAAAATTGACAAAAATACT
CACAAAATGATTAAAGTAAGAACATATTAAGAGCATTTTTGGCCATGAAA
CTAGCAAAATCAAAGCATACCCAAATTCTTAGAAAAATTGACAAAAATAC
TCACAAAATGATTAAAGTAAGAACATATTAAGAGCATTTTTGGCCATGAA
ACTAGCAAAATCAAAGCACCCAAATTCTTAGAAAAATTGACGAAAATACT
CACAAAATGATTAAAATAAGAACATATTAAGAGCATTTTTAGCCATGAAA
CTAGCAAAATCAAAGCATACCCAAATTCTTAGAAAATTGACAAAAATACT
CACAAAATGATTAAAGTAAGAACATGTTAAGAGCATTTTTAGCCATGAAA
CTAGCAAAATCAAAGCATACCCAAATTCTTAGAAAATTGACAAAAATACT
CACAAAATGATTAAAGTAAGAACATGTTAAGAGCATTTTTAGCCATGAAA
CTAGCAAAATCAAAGCACCCAAATTCTTAGAAAAATTGACAAAAATACTC
ACAAAATGATTAAAGTAAGAACATGTTAAGAGCATTTTTAGCCATGAAAC
TAGCAAAATCAAAGCATACCCAAATTCTTAGAAAAATTGACAAAAATACT
CACAAAATGATTAAAGTAAGAACATGTTAACAGCATTTTTGGCCATGAAA
CTAGCAAAATCAAAGCACCCAAATTCTTAGAAAAATTGACAAAAATACAC
ACAAAATGATTAAAGTAAGAACATGTTAAGAGCATTTTTAGCCATGAAAC
TAAAAAAAATCAAGCACATAAATGATACAAAATCTTTGACGTTCTAAGGT
TAAACTATTTACTTGTCATTTCTTAGGATCTAAGAACCCTTGGGATTATC
AATGCAATGAAGGTGATATGTGTTCCTGTTATTACCGTGGAACATATTCG
AGTCCTGAAAATAAACAAGCACGATGCTATGGAAATGGGCAATATCGTGA
GTATATATCATTTTTACCTTATTAGGCACAAGGGAATATTCATCTGGGTA
CGGCAAAAGAAGAACTTTAAGCGCAATTTTACTAACAAAGAGGACAATTT
CGAGATGTTTTTGAAGGGGGTAAGGTTTGGTATGTGGCGGAATTCCATAG
GGAGATGCAAAAATCTGTCAAATATAAGCTGAAATTCCATGCGGGGGTAG
CTTTTTAAATGCCACTAAAATTTAGAATTCCAGAGGGGTTTAAACCTGAA
ATTTTCCATGGGGTTGTTACAGCATTTCCAACCACAGAGGGATGGATAGA
GTTTTTTTCTGGAAAAACCCAATGTTTTTTTTCATAATTTTGATTTGGAC
GAATTCTTGATATATTATTGACCGTATATTTCTTTTGAAAAGCAAGCTTT
AGAAATATTTTATTACAAATGAAGACAAAAAACCAGGGTTGCAAGGTTTC
ATGACCGCTGTGATAGTCGATGAATTAAGATGATATCACTGTATATAACC
GATATAACTCATTAAATTTTGTATTTTAACGTTTACTTTTGGCTGATGGT
TCTCGTTCAAACGCACGAAACTTTAAGCTCCAAAAAACTACACATGTTTA
TTTCTCAATGACGTGGACAGATTTGAGATTTCATCGAGCACTTTTGGAAC
TAAGAAGATTTACAATCATGCAAAAATTATTTGAGACAAAGGGGATTTTA
CTGTGAAATTCTAAACACCAAAAATTATTTTTAAGCGCCTTAAACTACAG
TTGGAAAGTAAAGTTTTAGCTCAGAGTTTTGACATGAGACTTAAAACTTA
GGACCTTATGATCTCAGGGTTTCAAAGCTCAAATTTGCTCCAATAAGGCT
AGGAATATAGCCTAGAAGCCACTGAACTCCTCCAAAATCGAAATATTCAA
TGAAAGAAAGTGGAAAGTGCTAATAGCAATTCTCGCCCGAACTTTAAATT
CTGAAAAACGTTAAAATACACTAAAATCTCAATATATTTCGACCATGACT
GTAGAACTGTGATGGAATAAGATGTTAATAATCGGTGATATTTCTTTTTC
TTCTTTAGTGCCGAATTCGAAAGAATTTCTCACTTACACTAACAGTCTAG
ATGTTCGTATTGGGGATGCAAAGATCAAGAAAATTTGGTTCTGGAATTTG
AAAAGAGGAACAGAAAGAGGAATTTATGAAAAAAATTATTCTGAATCTGC
AATAAAATATTTTGAAGTGGACTCCGGTTATATGGTAAGAAGACGTTGAA
ATTCTAATTTACAGGCCCATGGAGGGGGTATTGGGGTTGGCGGATGAGGG
GTATGAGTAGAAACGGGACTTCCTAAAACTGACCCTTAAAAACACTGACT
TTTTCCGAAAAAGGTGACTCTTAGAGAGACAAAATTACTTAAAAAGTAAC
CCTCAGAGAGACATTTCACAAAATTTATTCGATTTTCAAAACAATTTTCT
ATTGACTTTCGAAAAATAATCTTACTTTCTTGACTCTTCGTTCTTCTTAG
GCTCGATTTTGTGAAAAAAAACCCTTATAGAGGCTTCATGAAGCCCAATC
TAATTCCAACGAGTTAGACCAAAGATGACGATTTCTAACTCAAACTGGGC
ATTACAGGAGGGCTTCGCCCTCCTACATAGCCCATGACCATATACTCGTC
ACTGGCACTTAAAAGGTTAAACGAAATAAATTATGAACAAGTAGTGTTAA
TTCTTTTAATGTGCGCCTCTGGAAAATTTAGCCAAAATTTCTTCCACGGC
GGCAAAAATACCCTAAAATTTCAGCTCCACTGAGAAATTGACTTTGTTTT
CATCTCTATTTGAAATTCATTGAGAAGAAATTTCACTCCAAAACCATCTG
CACTGGATTTTTTCGACCTGGAAGCAATTACTACATTATCGGGAAAACTT
CGTCGGAGAAAAGTAACGAAATTTTGGCCAAATGACGAATATTTTTCCCA
GACGAAAATTTTCCCCGGCCTTAATGCGTTTACCAACTACCAGCAAGTGA
TGAATATTTTTCCCCGACGAAGATTTTCCCCGACCAAAATTTTCCCGATG
AGGTATCCCCATTTGGATATCAATAGAAATTATCATCCGCATTGCGAGAA
GAAGTTCCACCAGGGGAGTTTTCTGGTCCAAAAATGCATTACAAACCATC
TCCATAACTTCCTTCCATCATTCATTCCCTTATTCCACAGAGCTCCCCGT
GCGTGTTTGACAAACGGAGACATAACTGTAGTTTGTTTGATATTCAGATT
GTCACAGGATTACCAGCAAACTGGGCAGGACAGCTTGTTATTGCAGTGTT
AAACACAGGAAAACACATCGTCTTCAAAGTCACTGGCACAATAACATGTA
AGACAGTACCAAAATTCTTACTTGATTTGAAACAATTTGACATTTTCATA
AATTACGTCACGAACATCACTTACCTCGTATTCAAACAATTTCCATTGTG
TGATCACAGCTATTAAAAACATTGAATGTTTTTTTTATGAATAGAAAGTA
GTTTTAATAAAATCCGCTGGGAGTTAGCCAGCATGGCAATAATTTCAAAA
CGAGACAAGTGATGTTCGTGACGTAATTTATGACAAGGTCTATTTGACTT
ATTGAAAACTACAAATCATGAAACTCAAACCCAGTCCCTTAGTTAACTTT
TTTGTGATTCTAATAGAGCTTACACGTTAGGATTTTATCACTACCATCAA
TAAAATCAAAAAAAGTGGTGCAAGTGGCTCTGCTTATGAGTTTGACCGTA
GCATGAAGGTAGAGCACCCAGCTACGGTGCGCAAGGTCATCGGTTCGATT
CCCAGCGGGGTCATACCAAAGATTACCAAAATGGTGCTTGATCTCTCTCT
GCTTGATACTCAGCAACTAAAGAGACGGATCAAGGGTAAGTGGGGAAATC
CAGAGAAAGGTGTGGCACCTTCCCCTACCTTCGGGTAGACAGCTATACGA
AAAGAGAGCCTTCGGGTCGCCCTCGACTGCGGTCGCAAACTTACTTACTC
ATAAGAGGTTGACAGATCATATAGGACAGTAAGGGAAAAGGTATCAAGTG
AAGTGTCTCAGATATCAATTGGGGGGATTAAGGTATGAGATTGACAAATC
ATATCGTAACCTGTTTGAAGGCTTGGCGAAGCTTTATGTGGTGACTATTT
TATTCTGTTGGCTAATGATCTTTCTATCTTCTCAGATCCTTTCGACTTCG
AAAGTATTTTCACAAAACCAACTACCACTACAACTGCAACTACAACAACA
ACAACAACTGCTGCTCCAACTACCACCACGACTGATGTCCCAAAAACCAC
GTCCTCAATAGCTACAACAACAAAAACAAAAACAACAACAACAACAGCCC
CCTTGATAACTACAACCACAGTATCCTCCTCTACTACTCAAACTAAAGAA
ACAACAACCAAACCTACTACTGTACAAACTACATTGGCAACATTAGCAAC
AACAATGGTGACAACAACACCAACCATAACACCAGCAACGACAAAAGCCA
AAGTAACAACGACTGCCAATGAATCAGCAGCCACAAGTCCTAAGGCCACA
ACTCCTACCAAATTACCGACCACAGCAAATAAAGAAACAACAACAACGAC
TAAAGTAACAGCTACTGACCAAAAATTGTCCACAGAAAAAACAACAAAGA
TTACAACGACTTCCCAAATAGAAACAAACCCAACAAATCCTTTGCTACTA
TCTACAACAAGTTCTACTCAAACACATTCTACATCTACTGCAAAAACACG
ATCAACATCTTCACCAACAACACCAGAAGTTAATTCAACGATACCAACGA
CCACTCAACCAACAAATGAAGAAGAGACCACAACAAAGATACCAGCTTTG
CCATCGACAGGTGGCAAACAAATCAAAGAAAAAGAAGAAACTCTGGGAAT
GGGTATTATAATAGCACTATCAATTATCTCTTTGGCTGTTCTAGTGCTGG
TCCTCATTGTTTTTATCCTGTGTCGTCGGAGAAAGAGAAATGAAAAAGGT
ATGTACAATGCCCCAGCTGGCACACAACTTTGTTTGAATGTTCAACTAAC
GTTATATGGACGTTGTAAACGTTAGATGAACATTGAAACAACGTTGTGTG
CCAGCTGGGACGCTAGCCCGGCATGGGGCACTCAAGCTATATGACCTACC
TTGGGGGTATGGTCCTTAAGGGTATGTTTTTCAAGATTTCCGGAGTGAAA
TACCCCCTTCTCACAGACCCAGTAGGATTTTTTTCGACCAGTGGGGTTAA
AAATAAAATTCGGTACGGATAGGAAAAATAACATAATATTTTGCAGTGAG
AATTGGCTTGTTTGATTCTTTTCGATGGGGATGAAAACTGGAGTGTAATT
TTTCACCGGGGACGATATTTTGGCCAATTTTTCCAGTGGGAAGGTGTCCC
ATTGGGTCTGTGAGAAGGGGTGTTTAGGTTTTCTGAAGTGAGCTGTTGGG
GTCGGTTTTTTCATGCACTAGAAAGTTAGGCTTAGTCGCACACGGTAGAC
TTCAGATTGAGTTTTCACTTGGGACTTTCTAGGTNATAAGTTTGCAGTAA
GGGTGTAAAATTGAGACGAAACAAATCTTTTTAGGCAACATTTTACAAAA
CCTAATCATGATTTTGCGCTAAAATAGACAAAGTTTTTCAAGAAAACGCA
CCATAAAGATCATTTCGCCCAAATTTATTCAAATTTGAATGGCTTTTTTC
ATGCGCTGGAAAGTCAGGCTTAGTCGCACACGGTAGACTTCAGATTGAGT
TTTCACTTGGGACTTTCTAGGTGAAATTACCTAACTCAACTTTTTCCAAG
AAAACACTTTCTTTGTCGAGACCTTCTCCGAAATTGGGAATTTGACCCTG
GAATCTCGTCGAAAGTTTGACTTTCAGAGACTCTTCTGGCTTAAGTTTCG
CTTCGAATACCTTCAAATAGACCTTTATGAAAAGTTACGTCACGAACATC
ACTTGCCTCGCATTCAAACAATTACCATGGTGATTATGTCTCTTGAGACA
TTAAATGATTTTTTTATGAGTAGGGAGTAGTTTTAATAAAATCCGCTGGA
AGTTTATCACCATGGCGATAATTTCAGAACGAGGCAAGTGATGTCCGTAA
CGTAATTTTTGAAAAGCTCTATTGTACACCCGGGGGGGGGGTACTTAGGC
AAATGGAGGGTACGGTTTGTGCCGCCCTTTTTTTGGACTTCCAAAGTCCC
ACTAAAGGTCGCAAAAATTAGAAAATCAAATTTCAGTCCCACTAAGGGTC
AGAAAAATAGGAAAATTTCAACTTTTTACCCCTTGAAAGATTGAAATTTG
GTCAAAATTTGTCAAATTTGTCCCGCTAAGAGTCGTAAAATTCCCAAAAT
TTTCCTTTGTTTTCTCCTTTTTAGTCCCGGTAAGGGTCCAAAGTTCGAAA
GTCGGGCGGCACTCCCCGTCAGCTCGCAACCCTAGTACCCCCCTTTCGGG
ATTGTATATCAATCGACGGAAAATTTCACTTAGATTAAAGACTGTGATTA
GAAACCAATTAACCTTCTGGCTTTAGAGCAAATTAGATTATTGCCCAGTT
GGCACGCAACGTTGTTTAACGTTTATCTAACGTTCACATCGTCCATATAA
CGTTAGATGAACGTCGAAACAACGTTGTGTACCAGCTGGTTGTGTACATT
TTTATAGATAAAGAAAGCAACGAACAAGAAGTAAAAACAGAAACAATTAC
GTCATCAAACATTGGGAAACCCATGCTTTTGGGTAACAAACAGGGAAATG
ATTTGCATCAAATGAACTCTTACGAAGATCCAACTCTTATGTTTGCCTCT
ATGGAAGGTATGTTTTCGTTTCAAACCATTTTCAAAATTGCATCTCGTCC
CTTTCCAAGCTGGCACACAACGTTCTTTCACCGTTTATCTTATGAACACA
ACGTCCATATAACGTTAGATGAACGTTAAAAAAACGTTATGTAATAGCTG
GGTCAATGCACAGCAACTACCCAGCTGGCACACAACGTTGCTTTAACGTT
TTTCTAACGTTCACAACGTCCATTTAACGTTAGATGAACGTTGAAACAAT
GTTGTGTGCCAGCTGGGTATATATTATGATTCTAGTACCACTCACAATTG
TACCAGAGCTCAGTATCAGTAGAATTAATAAGTGGTGCAAGTGTGAGAGT
GGCAACGAGTTCCTAACTGTTTGCGTGATTGACGTATTTTCGTGTTTGAA
GGCGTGAAAATTTAGTCATGGCGTAATGTCATGATTATGGCCATTTTCAC
AATCTTTATGTGATCTTTATGTGATCTTTATAATTGTGATGAAAGAAAAC
ATTTTGGCGCGATGACGTGATTTGCAATGCTGCTGTGGGTGCCTCTACGA
TTGTTAGATCATAGTATAAGAAAGCCGCAGCTTTCTTATGCTATGGTTAG
ATAAGGAAGGCCTCGATAATCTAGACTGTTTTGTTGCAATAATTCCTTCG
ATAATTCCTTCTCACAGACCTACTGGGACCCCTTCCCATCGGAAAAATTG
GCCAAAATATCTTCCCCGGAAGAAAATTATCTTCCAATTTTATCCCCACT
GAAAAAAAAAATCAAATAAACTAAGCCTCATTGAATAAAATGTTTACATC
GATTGTGAAGCCACTGTGGGTGCCTCCTTGATTGTTAGATGATGATATCA
CTAGGGAGAGCTTCAATAATTGAAACTGTTTTTTCGGGCTATTCCCTTTC
ATGAAAAATTAATATATACTTAATTTCTCTGATTGCAACATACTATACGG
GAATCATATTCAAAACCAGTACGCGACTTGTCGGGAAAATTTTTGGAACA
ATAAAAGGTCCATCTTAAAAATGAAAATATATTCTAAATTCTCTTTTTAG
GTAAAGAAGATACAAATTTTTCTTCGCCCGATGGTAACATTTACGAGGAC
ATCAAAGATGATCAACCACCACAAAAACCTAGACGTCGAGGTGATATATT
AGACGAAGTGGTCCCTTATCAGTATGGAAACGTAGGAATGAATCTTCAAG
ATGAGTCGTATACGGCAGAAGATGAAGATCTTGATTATGAGGGGCTGGAT
TTCAATGAAGATAATCATACAGTTCCAGAATTCAATGATGACTATCAAGA
CTTGAATGTAACCATAAAATAACTGAGGGACAAGACGAAGCCCAACCAAC
AGAGGATATTGATTATGAGGGGTTGAATACACCTTTTCCGAGATGTTGAT
TCTTTAAAGGTTTTCAAATCACATCAAAGTTTATGATTGTATTATAGAGA
AGAATTAATCCTGGAAAGTTGGGCTCAAAAGCTCTTTTCTATCACTGTTT
ATGGTTATGTTTATTCATGGTAAAATGTCTTATAAAAATCGAAACATACA
GCCCGGCCTCGTTTTCATTTAATTCTATTGTTCAGAATAAAAGTTTAATT
CAAAATAACTCAAAAACCGGAAGACCTTTTTAGATAATCCTTTTTTTATT
CATTTTGTATTTTGTTGCAGGTTTTTATTTTGCCAAAATGAAACACTGTA
ACAAAAAAGTCGAAAACATCTCGGGAAAGGTGTATTTCCATGAGTTTTGT
TGGTTTGTAAAATTAAATGGTAACTATCATTAACACAGTACCGAGTACAA
TATTGGACATATTTTTCCGAGTCCACAGCAGAAAATGAAGATCTAGATTA
TGAGGGGCTGAATTTCAATGAAGATAATTATACAGTGCCAGAATTAAATG
ATGACTATCAAGACTTGAACGTAGCCATAAAATAACTGAGATACTGATTA
TAATTTTGAAATCTATAATAATATGTAGGGCTCATCTGGATTTTTATCCC
CATTG

Coding sequence (CDS) from alignment at sc0000124:68958..78812-

>TCONS_00011293 ID=TCONS_00011293|Name=TCONS_00011293|organism=Clytia hemisphaerica|type=CDS|length=1758bp|location=Sequence derived from alignment at sc0000124:68958..78812- (Clytia hemisphaerica)
ATGGCTAATGAATTGCTAGCTTCCAAAATTCAACTATTTTATCTTCTCCT
TATGTCGACTTTATGCCACGCTGCTACAATTACAGTTGACAGGAATTATG
ATGATCTCAACGACCGATTCACCTTAGGATCTAAGAACCCTTGGGATTAT
CAATGCAATGAAGGTGATATGTGTTCCTGTTATTACCGTGGAACATATTC
GAGTCCTGAAAATAAACAAGCACGATGCTATGGAAATGGGCAATATCTGC
CGAATTCGAAAGAATTTCTCACTTACACTAACAGTCTAGATGTTCGTATT
GGGGATGCAAAGATCAAGAAAATTTGGTTCTGGAATTTGAAAAGAGGAAC
AGAAAGAGGAATTTATGAAAAAAATTATTCTGAATCTGCAATAAAATATT
TTGAAGTGGACTCCGGTTATATGATTGTCACAGGATTACCAGCAAACTGG
GCAGGACAGCTTGTTATTGCAGTGTTAAACACAGGAAAACACATCGTCTT
CAAAGTCACTGGCACAATAACATATCCTTTCGACTTCGAAAGTATTTTCA
CAAAACCAACTACCACTACAACTGCAACTACAACAACAACAACAACTGCT
GCTCCAACTACCACCACGACTGATGTCCCAAAAACCACGTCCTCAATAGC
TACAACAACAAAAACAAAAACAACAACAACAACAGCCCCCTTGATAACTA
CAACCACAGTATCCTCCTCTACTACTCAAACTAAAGAAACAACAACCAAA
CCTACTACTGTACAAACTACATTGGCAACATTAGCAACAACAATGGTGAC
AACAACACCAACCATAACACCAGCAACGACAAAAGCCAAAGTAACAACGA
CTGCCAATGAATCAGCAGCCACAAGTCCTAAGGCCACAACTCCTACCAAA
TTACCGACCACAGCAAATAAAGAAACAACAACAACGACTAAAGTAACAGC
TACTGACCAAAAATTGTCCACAGAAAAAACAACAAAGATTACAACGACTT
CCCAAATAGAAACAAACCCAACAAATCCTTTGCTACTATCTACAACAAGT
TCTACTCAAACACATTCTACATCTACTGCAAAAACACGATCAACATCTTC
ACCAACAACACCAGAAGTTAATTCAACGATACCAACGACCACTCAACCAA
CAAATGAAGAAGAGACCACAACAAAGATACCAGCTTTGCCATCGACAGGT
GGCAAACAAATCAAAGAAAAAGAAGAAACTCTGGGAATGGGTATTATAAT
AGCACTATCAATTATCTCTTTGGCTGTTCTAGTGCTGGTCCTCATTGTTT
TTATCCTGTGTCGTCGGAGAAAGAGAAATGAAAAAGATAAAGAAAGCAAC
GAACAAGAAGTAAAAACAGAAACAATTACGTCATCAAACATTGGGAAACC
CATGCTTTTGGGTAACAAACAGGGAAATGATTTGCATCAAATGAACTCTT
ACGAAGATCCAACTCTTATGTTTGCCTCTATGGAAGGTAAAGAAGATACA
AATTTTTCTTCGCCCGATGGTAACATTTACGAGGACATCAAAGATGATCA
ACCACCACAAAAACCTAGACGTCGAGGTGATATATTAGACGAAGTGGTCC
CTTATCAGTATGGAAACGTAGGAATGAATCTTCAAGATGAGTCGTATACG
GCAGAAGATGAAGATCTTGATTATGAGGGGCTGGATTTCAATGAAGATAA
TCATACAGTTCCAGAATTCAATGATGACTATCAAGACTTGAATGTAACCA
TAAAATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006329XLOC_006329Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011293-proteinTCONS_00011293-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011293-exon-sc0000124-1575043694:78661..78812TCONS_00011293-exon-sc0000124-1575043694:78661..78812Clytia hemisphaericaexon
TCONS_00011293-exon-sc0000124-1575043694:76767..76886TCONS_00011293-exon-sc0000124-1575043694:76767..76886Clytia hemisphaericaexon
TCONS_00011293-exon-sc0000124-1575043694:75529..75704TCONS_00011293-exon-sc0000124-1575043694:75529..75704Clytia hemisphaericaexon
TCONS_00011293-exon-sc0000124-1575043694:74416..74515TCONS_00011293-exon-sc0000124-1575043694:74416..74515Clytia hemisphaericaexon
TCONS_00011293-exon-sc0000124-1575043694:72765..73577TCONS_00011293-exon-sc0000124-1575043694:72765..73577Clytia hemisphaericaexon
TCONS_00011293-exon-sc0000124-1575043694:70956..71105TCONS_00011293-exon-sc0000124-1575043694:70956..71105Clytia hemisphaericaexon
TCONS_00011293-exon-sc0000124-1575043694:68958..69912TCONS_00011293-exon-sc0000124-1575043694:68958..69912Clytia hemisphaericaexon
TCONS_00011293-exon-sc0000124-1510915933:78661..78812TCONS_00011293-exon-sc0000124-1510915933:78661..78812Clytia hemisphaericaexon
TCONS_00011293-exon-sc0000124-1510915933:76767..76886TCONS_00011293-exon-sc0000124-1510915933:76767..76886Clytia hemisphaericaexon
TCONS_00011293-exon-sc0000124-1510915933:75529..75704TCONS_00011293-exon-sc0000124-1510915933:75529..75704Clytia hemisphaericaexon
TCONS_00011293-exon-sc0000124-1510915933:74416..74515TCONS_00011293-exon-sc0000124-1510915933:74416..74515Clytia hemisphaericaexon
TCONS_00011293-exon-sc0000124-1510915933:72765..73577TCONS_00011293-exon-sc0000124-1510915933:72765..73577Clytia hemisphaericaexon
TCONS_00011293-exon-sc0000124-1510915933:70956..71105TCONS_00011293-exon-sc0000124-1510915933:70956..71105Clytia hemisphaericaexon
TCONS_00011293-exon-sc0000124-1510915933:68958..69912TCONS_00011293-exon-sc0000124-1510915933:68958..69912Clytia hemisphaericaexon
TCONS_00011293-exon-sc0000124-1491911889:78661..78812TCONS_00011293-exon-sc0000124-1491911889:78661..78812Clytia hemisphaericaexon
TCONS_00011293-exon-sc0000124-1491911889:76767..76886TCONS_00011293-exon-sc0000124-1491911889:76767..76886Clytia hemisphaericaexon
TCONS_00011293-exon-sc0000124-1491911889:75529..75704TCONS_00011293-exon-sc0000124-1491911889:75529..75704Clytia hemisphaericaexon
TCONS_00011293-exon-sc0000124-1491911889:74416..74515TCONS_00011293-exon-sc0000124-1491911889:74416..74515Clytia hemisphaericaexon
TCONS_00011293-exon-sc0000124-1491911889:72765..73577TCONS_00011293-exon-sc0000124-1491911889:72765..73577Clytia hemisphaericaexon
TCONS_00011293-exon-sc0000124-1491911889:70956..71105TCONS_00011293-exon-sc0000124-1491911889:70956..71105Clytia hemisphaericaexon
TCONS_00011293-exon-sc0000124-1491911889:68958..69912TCONS_00011293-exon-sc0000124-1491911889:68958..69912Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000124supercontigsc0000124:68958..78812 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.141471	0.168613	0.105156	0.0823032	0.169583	0.167509	0.343557	0.416232	0.476859	0.262519	0.17518	0.335	8.04081	9.68588	0.321327	0.373569	0.295005	0.30237	22.8884	15.1217	0.623118	0.778371	0.288369	0.40964	2.37605	2.24426	0.754385	0.48306	0.625017	0.31996
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00011293 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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