TCONS_00011385 (transcript) - C. hemisphaerica

Overview
NameTCONS_00011385
Unique NameTCONS_00011385
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length704

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00011385 ID=TCONS_00011385|Name=TCONS_00011385|organism=Clytia hemisphaerica|type=transcript|length=704bp
AATCAATTCAAATATTCGAACCACTCACATCTCATCATGAAGGTTTTCAT
CGTCTTAGCTCTTTGCGctgCTTCTTACGCCCTTGAGGTTGAAAAGATCA
CTGGTACCACACCACCAGCTGTACCGTGCCCAGACTCCCTCTGCAAAGGA
AAAGCTGACGGAAACTTCGAATACTACTACTATGGCCAATACAGAAGCAA
CTATTTCGTCCAATGCTCAAATGGATTAGCTGCCTGTCAACCATGTTTCC
CATTGTCTTTGGAATTCAGTCAATCATGCAACCAATGTCTTTACAGCAAA
CAAGATGATTGTGTTACCACACAACCATGGGAACCAGCAACCACTTTGAA
ATGCACTGATATTTGCCCAACACGAGGACCTGAATTCAGTGGCAACCTTG
AAGATCCACACAGTCCATTCCAATACATCGCCTGCTGGAAGGGAGTCACT
GTAGGATGTGTTGCTTGCCCAAGTGGTTTAAAATTCAACGAGAGATGGAA
TGCCTGTTTATTTGATGGTATCTACAAAACTGCCCCATCTCACTAAATTC
TTTGATATTCCTAAATCGAGGCTTTTTGGATATTGTCCTCaatcaaaaac
gaaaattttgTAACATTTGATAGAATTTTTAAAACCATTGCATTTAATCA
ACCTTTTTTTGAATATACCTGATACACACTCCCAATAAAAGCTTAGCAAA
Ttgt
Run BLAST on NCBI

protein sequence of TCONS_00011385-protein

>TCONS_00011385-protein ID=TCONS_00011385-protein|Name=TCONS_00011385-protein|organism=Clytia hemisphaerica|type=polypeptide|length=181bp
NQFKYSNHSHLIMKVFIVLALCAASYALEVEKITGTTPPAVPCPDSLCKG
KADGNFEYYYYGQYRSNYFVQCSNGLAACQPCFPLSLEFSQSCNQCLYSK
QDDCVTTQPWEPATTLKCTDICPTRGPEFSGNLEDPHSPFQYIACWKGVT
VGCVACPSGLKFNERWNACLFDGIYKTAPSH
Run BLAST on NCBI

transcript from alignment at sc0000127:230948..243992-

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00011385 ID=TCONS_00011385|Name=TCONS_00011385|organism=Clytia hemisphaerica|type=transcript|length=13045bp|location=Sequence derived from alignment at sc0000127:230948..243992- (Clytia hemisphaerica)
AATCAATTCAAATATTCGAACCACTCACATCTCATCATGAAGGTTTTCAT
CGTCTTAGCTCTTTGCGCTGGTAAGAAACATTTTTTTATCTGACACACAA
CGTCTCGACAACATCCATCTATCGTCCATTTCATCAACGTTAAATGAATG
TTTAGACAACGTTATGCCCCGATGAGGGGAATCTTATCTCATCATTTCGA
ATTTTCCTGAATCATCTCTGTATATTGAAAAGACAAGGCAGTGTTGCCCG
TTGTTAAATAAGGAAGTCTAGTGATTCTCTCAGATAGTTGTCAAATAATC
TATCCACTAATTTTGCGGTTTTCGGAACGGCACCATTTCTTGTTGTAACT
GTAATTAATATATAAGCGACCGTAGTGCAGTGGTAAAGCATCCGGCTACG
GTTCGCAAGGTTGTGGGTTCAACCCCCAGCCGGGTCATACCAAAGATTCC
CAAAATGGTACTTGATGCCTCTCTGCTNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAAGAGGAGCCTT
CGGGTCGCCTCCGACTGCGGTCGCAGACTTACTTACTTAATATATAAGGA
TCTGATGAAGGTAGCATTCCTCTGTATTTTCTAGCGATAAACAAATGAGT
GATTTAAATTGTTTTTGACTTTATTGAGCGTATCGAAAAATTCCAAAAAC
AGTGTAATGATTAATACGCACTTTTCTCAATTCTTTTGTAGCTTCTTACG
CCCTTGAGGTTGAAAAGATCACTGGTACCACACCACCAGCTGTACCGTGC
CCAGACTCCCTCTGCAAAGGAAAAGCTGACGGAAACTTCGAATACTACTA
CTATGGCCAATACAGAAGCAACTATTTCGTCCAATGCTCAAATGGATTAG
CTGCCTGTCAACCATGTTTCCCATTGTCTTTGGAATTCAGTCAATCATGC
AACCAATGTCTTTACAATAAACAGGGTAAGAATGGTTGAGAATTTTTTTG
TTTTCACAAAAAACCTCAGCCCTTAAAACACCAATAATGAATCGGTACAA
TTAAGAAATAAAAGACCAAAGTGAACAGATAGCCTTATTTAAAATATAAT
CATAATTTGAAACAAGAATCAAGTTTTCGGTTTAGTTCCATATGTGTTCC
TTGGTATTGTAAACTAGATGCATTAAAGCAACTAAATTTATATTAAGTCA
TTTGATAGAAAAACGTACAAAAATGAATGTTCTGCTCGTATTGTTTATCC
GATTATACACCCCTGTGTCACAGACCCGTTGGGACCCCAGCCCCACAGAA
AAATTTAGCGAAAATTTCGTCTTCGGTGGGACGTTCCCTGGAATTTCAGC
CCCACTTTGACTTCATCCCCACTCGAAATTCAATGTTTAAAAACTGCACT
CCAAAATCATCCCCACTTGGTCTTTCCACCTTGGAACAAAAAGAATTTTT
ATCCCCATTGGGATTTCAATAGGAATTTTTATCCCCATTGAGGAAAATAG
TTCGGCTGGGGTGTGATTATGTACACTAAACGTTGACTTGGAGCAAGTTT
TTAACCTGTTGTCCTTTTTTCATTTAGACGATTGTGTTACCACACAACCA
TGGGAACCAGCAACCACTTTAAAATGCACTGATATTTGCCCAACACGAGG
ACCTGAATTCAGTGGCAACATTGAAGATCCACACAGCCCATTCCAATACA
TTGCCTGCTGGAAGGGAGTCACTGTAGGATGTGTTGCTTGCCCAAGTGGT
TTACAATTCAACGAGAAATGGAATGCCTGTTTGTTTGATGGTATCTACAA
GACTGCCCCATCTCACTAAATTCTTTGATATTCCAACATTGATTTATATC
ATGTACTGGATACATGTGCTTTGGATATTGATTGACCAAAGTCAAAAAAA
CGAAAATTTTTGTAACATTTGATAAGTATTTGTAATCATTATTTTTAATT
GAAATTTGTATTTAACTTCGAAACTATTTTTTTGAAGAATCACAACCGAT
AGAATAATAATCTCAGTATAATCTTATTTTGATCTTTTTTTCCATCGTTG
TTAAAGCACCAATTTTAACTACCAGTGGATACCCCTTAAAACCACATACC
CCTTAAAACCTACAAAGTTGGGTTTTAGGCCCTCTTAATCACCAAACTTA
ATTTAATATTGTATAATTCACTTTTTTACAATCTCTAATATAGGTACTTT
CATAAAATACCTACAGTATATGGCCCCCAAAACGGAGACGGCCCCCAAAA
CGGAGGTTTTCATTAAAGTGAAGATTCTGACTTGTAGATTTATCAGAATT
AAACGATTTTTGTTTATTTTGAAAGAATGATGGTTATACTTAAAAATAAG
CCTGTTTTTGCTGGTTTGAGACGGATTCAAAATAAGATATTTGCGTCTAA
AGGAAATATTTTAACACCAAAATTAGATAAAAATTGCATATAATTCACTC
TAGCTCCTTGGATATTGAAAATAAGTTATGAAAANNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATTTCTAGATATCTTTG
AATCTGTACCCAATGAAACACTTTAACTGATTTTGGACATATTTTAGGGG
TATTATGTGGAAACCATAGTTTTTCGCCAAAATTAAAATTATAAGAACTA
TATTTAAGATAACAACTTTCCTGTCAGTTTGAATGATAAATTTTGAAGGT
GCTGGCTTGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAACAAATA
GTCATCAAATACGACAGAGATAGAACAGTAGAAATTCAGATGTTATCATT
CCAGCCGCGGCTTTCTTATACTATGTTTAGAGGCTGGGTAAAAGATATAG
CATCTTGAAGGTCGACCAGTATCTTGGAGCCCTAGAATCAGCATTGACAA
AACCGAAAATTCTAAATATGAGAAAAAGTAAAAAATCTTGGAATTCTATT
CCTATCACCTTGAGTTAATAGTTTATAACAAAAAATTAACATTATACAGT
ATATGGCCCCCAAAACGGAGACGGCCCCCAAAACGGAGGTTGTCATTAAA
ATGAGGATTCTGACTTGTAGATTTATCAGAATTAAACGATTTTTGTTTAT
TTAGAAAGAATAATGGTTATACTAAAAAATGAGCATGTTTTTGATGGTTT
GAGACAGATTCAAAATAATATATTTGCGTATGAAGGAGATATTTTAACAC
CAAAATTAGATAAAAATTGCATATAACTCACTCTTAGCTCCTTGGATATT
GAAAATAAGTGATGAAAATGGGGTATAGGAAACTTTCTACACCTAATACC
GCTCAGAAAATGCAGATACATCAGTGACTTTAGAGGATGGGTAAAAGATA
TAGCATCTTAAAGGTCAACCAGTATTTTGGGACCCTAGAATCAGNTTGTG
ACTTTAGAGCATAGTATAAGAAAGCCGCGGCTGGAATATGTACCGCATTG
TCTTTTAAGTTGATTGCTGTTCCATCTCTGTCTCCGAGCTTTATAAGAAC
ATCAAGATTGTCAGTTTATTATTGGTAGATAGTTTTTGAAATTTTTCTCT
TATTTCCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNTTTTGTAAAACCTCTTTTCCTCTAGCTTTGAGAGAAATTTTAAATTTG
ATCGTCGTTTTGGGGGCCACATACTGTATATAAAATGTTTCGCTGAATCA
GCAAAAACGGCAAATTCTGACTTTTTTTTGCAAAATATAGGAAAAAAATA
TCTTTAAAGCTTAATATTTTCAGTTTCAGTTAAGCTTTTTTTCTAAAATT
TTCACAGCTTATTCCATTCATGAATGGAACTTTTTTCAAAAGAGATTGAT
TTTAAGACGTTGTTGTTGTAAGTTGTCATTTTGAAAATTTCTAAATTTTC
AGTTTGGACTTTGCAATATCGAAAATCTTGAAATATTTCATAAAAATCAT
AAATTTTACACCCATCGGGTCGTAAATTTAAGGGAAAACACAAATATGTT
CATAGTTTTTCCCCCAATTACCACTGGGCTTAATAATTTGATTTTAGCTA
CACCTCCGTTTTGGGGGTCCAAAACCTGCATTTTGACAACCAGGGGTATA
CTGTAAAAGTTTTATCAAATAAATTTATGCCCAAAACCCTCTAAATCATA
TTTCAAAACTATGGTCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATTGAAAATTTTGAAAAA
GAACTTCCAGGAAATAAAGTAGAGATGTTAAAGGTTTTCATGCAGCAAAA
ATTTTTGTAAAATCTCTTTTCCTCTAGATTTGAGAGAAATCTCAAATTTG
ATCGCCGTTTTGGGGGCCACATACTGTACCAAGAATTTTAATTATCACAC
AGTGTCGTAAAATTTGAAGTTCGTAAAAAAATCAAGTTTTTCGGACCTAG
TGATTACACAAATGAACTTTAAGGTCATAAAACCTATACTTTTTAGGTAC
CTATACTTATGGTAGGTACGAAAATCTTTTTTTCTTTTCCATGGTTACAC
GCCAAAAAAATCGTAAGGCCCTCAAAGTTCTATTTTAAAGCTCATTATCG
ATAGCGCAGTTGGGAGAGCCATCGCCCGGCACGCGAGAGGTCGTGGGTTC
AATCCCCACTCGATTCGTTACCTTTGAGAAAACTGGGAAGTACATTAGTG
CAGGATCCGTTGATTCATTACCCATAAGTAATACGCACTTGATTTCTCAC
AAAGCTCATTATGATAGTGGCCAATAAAATCTGAAAATCGACTTTCTCAA
AACATGGTCATATTGCATACCATAATGACACAAATTTGATGGAGATTTAG
AAAAACATTAGTAAAAATGAAGTGAGTTTTGAAGTTTTGACCCTTCAAAG
CCGTTTTTTACACAAAAAAACAGGCGCAATTGCATTATGGGCATGAAATC
CTGAAAAATACAAATATTGTTTTGGGAATGGATTTCTAGCAAGTAATTGA
AGCAATTGAATCACGGTTCAGCTCATGAATTGCAATTTCACAGTTTCAGT
AAGTTGTGAGTAAGGGATCAATGTTTGTAGGTTTTAAGGTGTAATAGTGT
AGGTTCTAAGGTGTATTTTGATTTTAACGTAACTGTTTTGAAAATATTTA
GGTTCCAATGATCTAATAATAGCATTAGTAACTTTGCAGTGAATCACTGT
TCAAAACTTGAGACAAAATAGTTATAAAAAGTTATTCAAGAAAACCATTT
TGTAGGTTTTAAGGGTTAAATAGCTAAAATTGCATTTTTTCACGATAAGC
AATACAAATTTTCTTAGCAGCTTTTACAAAAAAACATACCCAGGGAAGAA
ATTCATAGGTACCCTAGACTCACCAAAAAAAGTTTCAGCCCTTAACTTCC
TCTCCTAAAAATATCTTTCTTGCTTCCATCTGAACATTTGCTCTTTAGAA
AGACACCACTTCACAATAATCTTACTACGTTACTTTCTCATCTTAACCAT
TATTTTAGCATTCTTGGTATCACTGAGACAAAGCTTCATTTTACGATCGA
AAATACTGAACTCTCCATCCCTGGTTTTAAGTCATTCAATACCCCGGCAG
TCACAACAGATGAAGGAACTGCTCTTTTTATTTCTAAATCTTTCAAGAGC
AAGCCTCGTGAAGATCTTTCAAAGCTTGTATATTATAATTCTGACAACCT
TGAATCCACCTTTGCTGAAATTGTCCTGGAAACCGTAAAAAATTTGATTG
TTGGATGTATTTATAAACACTTTCTTTTTGACATTGATCTTTTTATCGGA
AAAATCTTAACTCCTTTGTTGCAAAAATCTTGTCAAGAAAACAAAAATCT
CGTCCTGTTGGGTGACTTCAAGATTGATCTTTTGACTTGTGACTCTAAAA
TCTCTCATTCCAAATTTCTTGACGTCCTTGGTGCCTTGGTGCCTATCAAA
TTCTTCCATCTATTACTCTTCCAACGTGGATCACTGATACTACAAGTACT
CTCCCATCGACAAGTTTTTTAACTCTCCTCTAAACTGCTCTTCAGTTTCT
GGAAACCTAACTGTCAATATCTGATCATCTTCCACAATTTTTGACTCTTA
ACACCGATTGTAGTTCTCACTATAAACCTGAACTTCCTTTTTGTCGAGAT
TGGTCAAACTTTGATGAAGTAGGTTTCAAAGAAGAATATTTGAGAACGTA
GATTAAAAAGGTCTTCTTGATATTGAAAGGGGGGGGAATGTTGATTCATC
TTTTAACTCTTTTATAACTCGATTTAATTCTTTGTTTGAGAAACATGTTC
CCCTGAAACAATTGCCTAGACGTCAGGCTGATCTCATACGGAAACCTTGG
ATCACCAGAGGCATTCGTTACTCCATGGAAATCAGAGATAACCTAAACGG
GGAAAAGGGAAATGTTGATTCGTCTTTTAACTCTTTTATAACTCGATTTA
ATTCTTTGTATGAAAAAAAATGCTCCCCTGAAACAATTGACCAGACATCA
GGCTGATCTCTTACTAAAATCCTGGATCAGCAAAGGCATTCATTCCTTCG
GAAATTAGAGATAACCTTAACAACGACTATCTATGAGTAAAAGATTCTTC
ACCTGATCTTAAACAATTTCTTCGTGGTAGGTTTACATTTTATCGAAATT
GATAAACTTTGGATGGATAAAACATTTTGAGCAAGAGGGACATAGGACCG
TCCACATAGTACGTACGCACTAAAATGTCGAAAATCAAGTACTCCCTCCC
CTCCTGTACGCACGCGTACGCAAATGGCTATACTCCCTTGGTAAGTACGT
ACTTTTTCAATCAGCTCCCCCACCCTCGGTTGAAGAAAATTTCTAATTCA
AATCGTTTGGTTAAGAGCTTTATTTCATACATGAAACTCAATGTTTATTA
GCCCTATTCATACTAGGCTTTAAGAGGTGGTTCAAAACTAGGGGGGGCTT
TTCCTGCACCAGCCCTTAACTTTTGATCTAGTGGGTCTTTTTGGATGAAA
TGTGGCACACAAGATCCTTGTCACATAAGGTAACTTTTGACAAATTTTTT
TTTGATAACGTCACTCATCATGCTCAAAGTGAGCAAAAACTGAAAATTTC
CTTTGTTCTTATAAATAGCTATTGTATTCTAACAATTTCCTGAGTCTAAA
ATGCTTATTTTATCCTAAATATTCAATAAGTGATTTAACGATATATTTGG
TATATTTGACATAAAAAATAATTTTGTATTGGAAATGTGTCAATTTTTGT
GACACCTTACTGTCAGAAATTGTCATCATGCTCAAGGTGTGAAAATTTTT
AGATGTCAATTTTTTTTATTTTGAAGCTAAATATATGCTGGGTATCAACG
GGTTAGTATAAAAAATTCAACGAGGATAAGGATTCTTTTGATACTTGCTC
ACTTTTCTTCAGTCTTATACATAGAGTAGGCCTTATCTAAAAGCTATCTA
ATTTCCGAAAGAGTAATCTGTTTCAAAGACAAAAAAGACTTTGCAGCCAG
GAAATTCTTACTGAAAAACCTGTTAAAACCGTTGGATTTTCGCAAGATTA
TCATTGTAAAAATACTGGAAAAGAAAGTAAACAAAAACATACAAACAAGA
TGAAAAGTAAAATGGAGCTTATCATATAAAAAATAGAAGACAAAAGAATT
ATGACGAAAAATGAAAAAGATGTTTGTGATGTTTCATTATGACACGATGG
GATATTACATAAGCAATTAGATATCCCGGTGTTTGTTACATTTTCAAATG
ACAATACATTCCAATGATTTATTAGCTATAAACAAATTATCCGGATATTC
TTCTACAACCATTATATCCAAGATGAAATGATATAAATAAGAGTTGTTCT
AGAATATTTTGATCATCATATCGAAGTTCAAATACTCGGATCACTCACAT
CTCATCATGAAGGTTTTCATCGTCTTAGCTCTTTGCGCTGGTAAGAAACT
TTTTTTTTTCTTTATCCATCTATCGTTCATATCAACCATATTGTTGTCAA
ATGATTTTGCTACTATTTTTGCGTTTTTTGTAACGGTGTATTATTGTTAT
TTATTGGCATTTTGTAGCAGTTTTTTTTGGATGATAACGGAAAGTTCAAA
GGTAGCGTATGGAGCATAGACATACGTCCATACTCTTATAAATCTTTTCT
ATCATTTCTTTTATAGCTTCTTACGCCCTCGAGGTCGAAAAGATCACTGG
TACCACACCACCAGCTGTCCCATGCCCAGACTCCCTCTGCAAAGGAAAAG
CTGACGGAAACTTCGAATACTACTACTATGGTCAATACAGAAGCAACTAT
TTCGTCCAATGCTCAAATGGATTAGCTGCCTGTCAACCATGTTTCCCATT
GTCTTTGGAATTCAGTCAATCATGCAACCAATGTCTTTACAGCAAACAAG
GTAAAAAATACTTGAGAAACTTGGTAAACTACACTTCACATAAGACCCTT
TACCCCTTCCTAAAAAGTTCCAAATTAATTTTAACCAATCACTTTTTTAA
ATTTGAAAATTTTTTCTTTCTATATGACCCTATTCATAAGTTTTTAGATG
CAATGAGTATCAAAATCTCAATCTAAAAACCTCATCCCTAAGAAGATCCA
TTTTAATATCAGTCCCATATATATTTTTGAAATTTGAAAAAGTTTTTGTA
AAAGCTTCTCTATCTGAAAAGTTAGAGTCCTGTAATTCAAAAGCTTGCAC
AACTGAAGTCCCAAACCCAATTCACCCACACAACGTCCTTTCAACGTTTT
TCCAATATTCACAACGTCTATATAACGTTAGATGAACGTTGAAACAACGT
TGTGTGTCAGCTGGGCGTATACTCTCAGGTGCCTAATAAACGGGGGGAGG
TTGGAAAAAACGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNAGAAAACGAATTCAGTCAATAATTTAATA
CAAATATTCGCTAAAATTTATCCACGCGAAATTTTTTGAAATCGTGATTC
GCTAAAATAAATCCAATAAAAAATCGATTTTTCTGACTCGCTAATATACG
CTAAAATTAGTCTCGCTAAAATTTCTACGATTAAAGTACACTTAATTATA
AATTAAAGCAAATTTTTGACCTATTGTTATTTCTTTTTTCCTTAGATGAT
TGTGTTACCACACAACCATGGGAACCAGCAACCACTTTGAAATGCACTGA
TATTTGCCCAACACGAGGACCTGAATTCAGTGGCAACCTTGAAGATCCAC
ACAGTCCATTCCAATACATCGCCTGCTGGAAGGGAGTCACTGTAGGATGT
GTTGCTTGCCCAAGTGGTTTAAAATTCAACGAGAGATGGAATGCCTGTTT
ATTTGATGGTATCTACAAAACTGCCCCATCTCACTAAATTCTTTGATATT
CCTAAATCGAGGCTTTTTGGATATTGTCCTCAATCAAAAACGAAAATTTT
GTAACATTTGATAGAATTTTTAAAACCATTGCATTTAATCAACCTTTTTT
TGAATATACCTGATACACACTCCCAATAAAAGCTTAGCAAATTGT

Coding sequence (CDS) from alignment at sc0000127:230948..243992-

>TCONS_00011385 ID=TCONS_00011385|Name=TCONS_00011385|organism=Clytia hemisphaerica|type=CDS|length=546bp|location=Sequence derived from alignment at sc0000127:230948..243992- (Clytia hemisphaerica)
AATCAATTCAAATATTCGAACCACTCACATCTCATCATGAAGGTTTTCAT
CGTCTTAGCTCTTTGCGCTGCTTCTTACGCCCTTGAGGTTGAAAAGATCA
CTGGTACCACACCACCAGCTGTACCGTGCCCAGACTCCCTCTGCAAAGGA
AAAGCTGACGGAAACTTCGAATACTACTACTATGGCCAATACAGAAGCAA
CTATTTCGTCCAATGCTCAAATGGATTAGCTGCCTGTCAACCATGTTTCC
CATTGTCTTTGGAATTCAGTCAATCATGCAACCAATGTCTTTACAGCAAA
CAAGATGATTGTGTTACCACACAACCATGGGAACCAGCAACCACTTTGAA
ATGCACTGATATTTGCCCAACACGAGGACCTGAATTCAGTGGCAACCTTG
AAGATCCACACAGTCCATTCCAATACATCGCCTGCTGGAAGGGAGTCACT
GTAGGATGTGTTGCTTGCCCAAGTGGTTTAAAATTCAACGAGAGATGGAA
TGCCTGTTTATTTGATGGTATCTACAAAACTGCCCCATCTCACTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006384XLOC_006384Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011385-exon-sc0000127-1575043694:243923..243992TCONS_00011385-exon-sc0000127-1575043694:243923..243992Clytia hemisphaericaexon
TCONS_00011385-exon-sc0000127-1575043694:242886..243101TCONS_00011385-exon-sc0000127-1575043694:242886..243101Clytia hemisphaericaexon
TCONS_00011385-exon-sc0000127-1575043694:232843..232860TCONS_00011385-exon-sc0000127-1575043694:232843..232860Clytia hemisphaericaexon
TCONS_00011385-exon-sc0000127-1575043694:230948..231347TCONS_00011385-exon-sc0000127-1575043694:230948..231347Clytia hemisphaericaexon
TCONS_00011385-exon-sc0000127-1510915933:243923..243992TCONS_00011385-exon-sc0000127-1510915933:243923..243992Clytia hemisphaericaexon
TCONS_00011385-exon-sc0000127-1510915933:242886..243101TCONS_00011385-exon-sc0000127-1510915933:242886..243101Clytia hemisphaericaexon
TCONS_00011385-exon-sc0000127-1510915933:232843..232860TCONS_00011385-exon-sc0000127-1510915933:232843..232860Clytia hemisphaericaexon
TCONS_00011385-exon-sc0000127-1510915933:230948..231347TCONS_00011385-exon-sc0000127-1510915933:230948..231347Clytia hemisphaericaexon
TCONS_00011385-exon-sc0000127-1491911889:243923..243992TCONS_00011385-exon-sc0000127-1491911889:243923..243992Clytia hemisphaericaexon
TCONS_00011385-exon-sc0000127-1491911889:242886..243101TCONS_00011385-exon-sc0000127-1491911889:242886..243101Clytia hemisphaericaexon
TCONS_00011385-exon-sc0000127-1491911889:232843..232860TCONS_00011385-exon-sc0000127-1491911889:232843..232860Clytia hemisphaericaexon
TCONS_00011385-exon-sc0000127-1491911889:230948..231347TCONS_00011385-exon-sc0000127-1491911889:230948..231347Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011385-proteinTCONS_00011385-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000127supercontigsc0000127:230948..243992 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.317594	0.240594	0	0	0	0	0	0	0	0	0	0	0.344685	3.12022	52.163	8.2972	0	0	0	0.00234276	0	0.0507008	0	0	0	0.0686772	0	0	0	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002557Chitin-bd_dom
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: Biological Process
TermDefinition
GO:0006030chitin metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0008061chitin binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006030 chitin metabolic process
cellular_component GO:0005576 extracellular region
molecular_function GO:0008061 chitin binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00011385 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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