TCONS_00011426 (transcript) - C. hemisphaerica

Overview
NameTCONS_00011426
Unique NameTCONS_00011426
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length930

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00011426 ID=TCONS_00011426|Name=TCONS_00011426|organism=Clytia hemisphaerica|type=transcript|length=930bp
AACGACTTAAACTGCAAGAACACGAACGATAAGTGTGATAGATGGGCCAA
AGGAGGTAAATGCCATGAAAACCCAGTCTACATGATTGTCAGCTGTGCTC
CCGCCTGTGATGTCTGCTTTCATGGTGATAAACGTTGGTCATGCAGTTAT
TGGGCAAGACGTGGAGAATGCACCAAAAACCCTTCATTCATGAATAAGGC
TTGTCCATCCAGCTGCAGTGCTCAAGCACAAGAAGATAAACGTTTGGCAG
GATGTTTAAATGCGTGCAGTGAATTCGCATGCGCATCAGATACAAGCCTT
CAAAAAGGATGTAATCAAATGTTTTCGTGTACGCATGCGTGTAAAATGCG
ACACCTTGGAGTCACTGTCGGTAGCTGCCGAACGAAATGTGAGCGCAACG
GGCAATCTGGCTGCTTTCCGAAGGTCGAGGGGTACACATTCAATTTGTGC
GTCGCATGCTCAAGAGAAGGTTGCTCAACCTTTCCAACCGTCGACGAATG
TAAAATTGGCTGTGACTACTTTTAAAATGGACAATAAAATCCAAAGATTG
GAGGATTTATCTAAGGTTCACATATTGTTTTCTTCAGTTCTTAAAAACgg
gttattttttattttgatgattcaATATAAGATAACATAAAACTTGAGGG
ATGATCTGAGGGTAATTTGAGATCCTTAACCTACTGAAATCTCTGTCTAG
CTTACCTTGCTATTTcttcaaataaattttacctTTGCTATATAAACTTA
AGAAATCGTTTTTTGAGGTTTCGCCCAGGACAAAAAACTTCGGACTTTCA
TGCCGAAGATCTTTACTTAAGCCATCAGATTATCCTTTTGACTATATAAT
TCTTGTattaaacttcttttttttaaacaatcttaattaaaaaaatatat
ttttcaagatATCCGACACTTGAAATCTTg
Run BLAST on NCBI

protein sequence of TCONS_00011426-protein

>TCONS_00011426-protein ID=TCONS_00011426-protein|Name=TCONS_00011426-protein|organism=Clytia hemisphaerica|type=polypeptide|length=174bp
NDLNCKNTNDKCDRWAKGGKCHENPVYMIVSCAPACDVCFHGDKRWSCSY
WARRGECTKNPSFMNKACPSSCSAQAQEDKRLAGCLNACSEFACASDTSL
QKGCNQMFSCTHACKMRHLGVTVGSCRTKCERNGQSGCFPKVEGYTFNLC
VACSREGCSTFPTVDECKIGCDYF
Run BLAST on NCBI

transcript from alignment at sc0000128:2421..20073+

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00011426 ID=TCONS_00011426|Name=TCONS_00011426|organism=Clytia hemisphaerica|type=transcript|length=17653bp|location=Sequence derived from alignment at sc0000128:2421..20073+ (Clytia hemisphaerica)
AACGACTTAAACTGCAAGAACACGAACGATAAGTGTGATAGATGGGCCAA
AGGAGGTAAATGCCATGAAAACCCAGTCTACATGATTGTCAGCTGTGCTC
CCGCCTGTGATGTCTGTAAGTACATACGCTACTAATATTGTTGTTATTGC
AGTAGAATCTCTTTACTTCGaacctccttaactcgaacaagttttcttgc
CCCATCAGTTAACCTTACAAGCCTTACTTCATAACTCCATAATACTCAat
aatttccttaattcaaacaaATTTCTGTTTTCCGCCCGTGTTCGAGACTC
GACTGTATAAGGAGCGTTCCCACAAAGTGTTACTTTTAAGTCAAGAAGAC
TTGCGTGATATCAGTTGATTTAAGCTAGGTTTGTTACAATAGGTTCCTGT
CACACCTTAAAAATCACGTGATGAATGTGAAAAGAACAAATCCTTTGGCC
CCGTAAAGCTTTATTTGTTTGTTATAAACAATATCAACTTTTAGAAAGAC
TCTATCTTTTGCAGTAGCTTGGAAATTAACGACTTCGAAATCCGACTTCT
GTAAATACCATTCTTCTTATGGCAGGCTTTCACGGTGATAAACGTTGGTC
ATGCAGTTATAAGGCAAGACGTGGAGATTGCACCACAAGTCCTTCATCCA
TGGATAAGCTTTGTCCATCAAGTTGCAGTGCTCAAACACAAGAAGGTAAG
GCTACGTTCATCTTATCCTGCCGTGTGCTTAATAAACGATCCACGCTTGT
TagttttttgatttcttccACACCCCGGACCTTATAAGGACCCCTTTCGC
gtttatttatattttcagctatcaaaagaagagtcccttattttgctcta
aatagctaaattttagtctataattaccttattttgaagtacaatttcca
acccccaggTAATAAGTCCCTCTCCtgtttatcaaaatttgaaaatattt
tcagctgtcaaaataAGAGTCTTTTATTTGGTTCTAAATAGCTAGGTCTA
TAATTACCTTACTTTGAAGGTATTTTAAAGGCACAATTTACCGCATTAAA
ACTCAAATGAAGATCTATTTTTGAGGTTTAAACTATCGCCAAACGATAAT
TCCCGATATCTGGGTTAACCCGAgcctattattattatttgtgTAAAATG
TATTTTACCTTTTTGATTCTTTGATTAATAGAACTAATTAAAATTCGATT
GCTTAATGAATATTAAGATGCCGTTGATTGGTGCAAGATCCATTTGCATC
TCATTCGAACCATTACATAATGTTTGCATTTCACTTGTAGATAAACGTTT
GGCAGGATGTTTAAATGCGTGCAGTGAATTCGCATGCGCATCAGATACAA
GCCTTCAAAAAGGATGCAATCAAATGTTTTCGTGTACGCATGCGTGTAAA
ATGCGACACCTTGGAGTCACTGTCGGTAGGTGCCGAACGAAATGTGAGCG
CAACGGGCAATCTGGCTGCTTTCCGAAGGTCAGGGGGTACACATTCAATT
TATGCGTCGATTGCTCAAGAGAAGGTTGCTCAACCTATCCAACCGTTGAC
GAATGTAAAATTGGTTGTGACTACTTTTAAAATGGACAATAAAATCCAAA
GATTGGAGGATTTATCTAAGGTTCacattttttttcagttcttAAAAACG
GGTTATTTTTTATCTAGACAATTAAATTCTTTTATATAAGATTACATAAA
ACTTGGGGGATGATCTGAGGGTAATTTGAGATCCTTTGCCTACTGAAATC
TCTGTCTAGCTTACCTATTTcttcaaataaattttacctTTACTATCTAA
ACTTAAGAAATAGTTTTTTGAGGTTTCGCCCAGGACAAAAAACCTTCAGA
CTTTCATGCCGAAGATCTTTACTTAAGCCATCAGGTTATCATTTTGACTA
TACAATTCTTGTataaaatttatatattttaataattttcaataattttc
actGCTTCAACTGTCATAATTCTTGtataaaagctttaaaatataAGCTT
TATTCTTCTTATAtctcttaaaaaaactttttcaaaacttaattGTGGCA
AAACTTTCTTCTCAGTCCCTAAATATCCGGGTATCCGTGATGGTCTTCAA
GCCAACTGTCTGTAGAGCACCTGCAGCCAACACTAACTGACATGCGCGCG
AattgaatatctaaaaaaaaGAGAAGGCGAAACGAGTGAATTGAATAATA
AGAACCACACCCTGCAGTTTTGTTGTAAAAACTTACAGTTGACACTTGAA
CTGTGAATTCAACGTTCAAGTATTCAATACGCTCcgttattcgataatat
taaaAGTCGCCATCAACAACAAATTCTCCTAAATAGGCTCCCTTCTTCGA
TGAagatccaattccccttgaaaatcgaatcgGAGAACATCAACTGAATT
TTGGCGAGTGAGATCTTGGACTGCCTTGCTTTGTGGTAGTGACAGCTTTG
CAAGTAGAAATCAACTATATAGCTAATGCCTAAGCCGATTCATAAAACTA
CTAATCCCGTAAGTCACTGCTTGGATATAAcataatcaaatttaaaaaaa
atacaacactGTTAAATTTCCCAGacaaatgctgtatttcatcaCTTTTC
GTGCCAAAAAGCTGACCAACGCCGTTTTCGGCATTGATGCACAAGTCGAC
tgcatagcttcagccaggtttctagctccgCCCAACAACTTAGCTCCCCC
CATAAAATTGCCTTTTGCTAGGTCCCCTatatatgcgagtacagtaaggc
tgataaatgaaaactaaattttacttgtattaatatttatgtttacaaat
cttttgctttttgggcctacctccgggtaccccgctggaggtcctatgaa
ttaaccgttgtctgttcgttcgttcgttcgttcgtccgtccatttgtctg
ttaccagcttttctcgagattggctctgaGATGTTCTGTGTATTtctttc
gttgtgagacagagatgtactgtgtatttccttcgttgtgagacagagat
gtactgtgtatttctttcgttgtgagacagagaTGTACTGNNTTTCGTTA
TGAGACAACGATGTACTGTGTATTtctttcgttgtgagacagagaTGTAC
TGTGTATTTCTTTCGTTGTGAGACAAAGATGTACTGTGTATTTCTTTCGT
TATGAGACAACGATGTACTGTGTATttccttcgttgtgagacaaagatgt
actgtgtatttctttcgttgtgagacagagatgtactgtgtatttctttc
gttgtgagacagagaTGTACTGTGTATTTCTTTCGTTATGAGACAACGAT
GTACTGTGTATttccttcgttgtgagacagagatgtactgtgtatttctt
tcgttgtgagacagagaTGTACTGTGTATTTCTTTCGTTATGAGACAACG
ATGTACTGTGTATttccttcgttgtgagacagagatgtactgtgtatttc
gttcgttgtgagacagagatgtactgtgtatttctttcgttgtgagacag
agatgtactgtatatttctttcgttgtgagacagagatgtactgtgtatt
tctttcgttgtgagacagagatgtactgtgtatttctttcgttgtgagac
agagatgtactgtgtatttctttcgttgtgagacagagatgtactgtgta
tttctttcgttgtgagacagagatgtactgtgtatttctttcgttgtgag
acagagatgtactgtgtatttctttcgttgcgagacagagatgtactgtg
tatttctttcgttgtgagacagagaTGTACTGTGTATTTCTTTCGTTATG
AGACAGACATGTACTGTGTATTtctttcgttgtgagacagagatgtactg
tgtatttctttcgttgtgagacagagatgtactgtgtatttctttcgttg
tgagacagagaTGTTCTGTGTATTtctttcgttgtgagacagagatgtac
tgtgtatttctttcgttgtgagacagagatgtactgtgtatttctttggt
tgtgagacagagatgtactgtgtatttctttcgttgtgagacagaaatgt
actgtgtatttctttcgttgtgagacaacgatgtactgtgtatttctttc
gttgtgagacagagatgtactgtgtatttccttcgttgtgagacagagaT
GTTCTGTTTATTTCTTTCGTTGTGAGACAACGATGTACTGTGTATTtctt
tcgttgtgagacagagatgtactgtgtatttccttcgttgtgagacagag
aTGTACTGTGTATTTCTTTCGTTATGAGACAGATCTGTACTGTGTATTtc
tttcgttgtgagacagagatgtactgtgtatttctttcgttgtgagacaa
cgatgtactgtgtatttctttcgttgtgagacagagatgtactgtgtatt
tccttcgttgtgagacagagatgtactgtgtatttccttcgttgtgagac
agagatgtactgtgtatttctttcgttgtgagacagagaTGTACTGTGTA
TTTCTTTCGTTATGAGACAGATCTGTACTGTGTATttccttcgttgtgag
acagagaTGTTCTGTTTATTTCTTTCGTTGTGAGACAACGATGTACTGTG
TATTtctttcgttgtgagacagagatgtactgtgtatttccttcgttgtg
agacagagatgtactgtgtatttctttcgttgtgagacaacgatgtactg
tgtatttctttcgttgtgagacagagatgtactgtgtatttctttcgttg
tgagacagagatgtattgtgtatttccttcgttgtgagacagagatgtac
tgtgtatttctttcgttgtgagacagagatgtactgtgtatttctttcgt
tgtgagacagagatgtactgtgtatttccttcgttgtgagacagagaTGT
ACTGTGTATTTCTTTCGTTATGAGACAGATCTGTACTGTTTATTTCTTTC
GTTATGAGACAGATCTGTACTGTGTATTtctttcgttgtgagacagagat
gtactgtgtatttctttcgttgtgagacagagaTGTACTGTGTATTTCTT
TCGTTATGAGACAGATCTGTACTGTGTATTTCTTTCGTTATGAGACAGAT
CTGTACTGTGTATTtctttcgttgtgagacagagatgtattgtgtatttt
cttcgttgtgagacagagaTGTACTGTGTATTTCTTTCGTTATGAGACAG
ATCTGTACTGTGTATTtctttcgttgtgagacagaTCTGTACTGTGTATT
Actttcgttgtgagacagagatgtactgtgtatttctttcgttgtgagac
agagatgtactgtgtatttctttcgttgtgagacagaaatgtactgtgta
tttctttcgttgtgagacagaaatgtactgtgtatttctttcgttgtgag
acagaaatgtactgtgtatttctttcgttgtgagacagaaatgtactgtg
tatttctttcgttgtgagacagaaatgtactgtgtatttctttcgttgtg
agacagaaatgtactgtgtatttctttcgttgtgagacagaaatgtactg
tgtatttctttcgttgtgagacagaaatgtactgtgtatttctttcgttg
tgagacagaaatgtactgtgtatttctttcgttgtgagacagggagATAG
GAAAGCAAAACACCACTCGCACTCTtgcatgagacagggatgtaatatgG
TATATTACCTTCGTTGTGACACAGGTAGGTGCGAGAGGCGGGGAGAGCTA
AAATACCACTCGCGTGATACAGGGATAATACTTACctgataaaataatat
ttcttcttcctttttacCGAGTATTCAACGTTGCCTTGATATacattaag
ggctctgaccatagtgaatttttcataattgccgtgtttaaaatgtattt
tctgactgatgtaatgAACAAAACCATggtatgttatacattttcaaact
attcttgaatctgaaaatttaaaaattgcattgaaaaagtttgatgaaga
agaaaatgaagaattttgcgaggaagagtatttcaactttgaagagctta
gtttcggcgaagaaaaaacattttgaaatttttttcgcaatagatggtgt
atcttttaccaaacaataaaaatttttgcggaaaatttttgtaaatgctt
ctttgtcgcgaaatcttcaaaatagtggtttttcattaaattttcatctg
gattttgcttaaaaaatatcataacttttaacacatcttttaagaaatat
tttccgcaaaatttataatagttcaattctttgcggacagtttgaaaaaa
gttcgaaacaaaaaggttaattacccattaaaacttagcactttttataa
aagaaggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTtagcaattaag
ttcttaattactcttaagggatttgattaaaaagcaatttataaaggcaa
ttctttgttaaaagtgttaaagaatctaaaacatacttttatgttcagat
actaaaattaattttctatgCTTATgtgaaagcataaaaaagcataCTTT
TATCGCCCTCACTTTTATTGATCGTGATATAAAGGGGGCCTTAGATAATA
TCCTTGAATGGGAATATGATTACTACTTGCATTGTGTTTACGACTTTACG
TCGTATTTCTCATTTCTTCTACCGTGTAGGAGTGCCAAACCGACGGGTAC
ATAATGCataaaaccattgagtttaaagcccgaagggctagagttcaatc
tctaacctttctcgggcaataaaaagtgaagccttaaaaaatgcgccgca
tttttgacgacagattgaatctagcaattcctttgtgtacgattgatatt
tttttcgaaatttagcgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtttagtcacgtgac
tctggtaggaaatccttccaaagatgagcttcactttttgataaaagccg
caaatctagcccttcgggctttacagatatctgtgattATATATATACCA
TAtagtgtaatttacagaacgattttatattttctaaaactctcctttgt
agaggctaaaaccgcgaaaacctatttagaagagtttcttaagtaaacat
tccaatcagagggatttccccagacatgatatttacaTTTCGAACCCGaa
tgaaagagaaaacattcgaatcataacaacaaagggttttccgtcagcat
gaataataagaagatgcaacagatcagaaagatATCCTCCTTCTTCTTTC
CCAAAAATAGGTaaacacataaacattcgaTTGTTCTATTTTCTTATATG
ATAGCTTATTGATATCCCAAAGAAAATACTTTTGAGAAGAATCATTTtaa
ttattcctaataattttccaaaatttcactataaagcattaaaaagcttt
aatcAGCATTTAGTCGTTATAAGCATTTGTAGcaggtggcagttagtgaa
agcaatcggcaggtccaaaatgcataaaacataatgcatattgcataatg
cataatgcataatatttgaaaaatgtcaattttagaggctataattagga
gaatttgaaagataatactttcaacaaaacaaatataccattttctacca
gaaaataaagggtagaaagctgtaaatttgaattttggaggATGAAGAAA
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTCTCAGCAGAG
ATTctttcgaacaattgctaataaatttcaacgggtttaccctcttacaa
agcattaaccatgtgaatgctttttgttagataagctaatatccagccaa
tataaattaaagagcttcatccggaagctagtccaggagctggagctcaa
ctactttttggcctttactaattctgatgggggaaaaagtagcgccatca
ttcaaatcagaaagcgaagatagtatacggcagattttctgactatccgg
aagctagatcaaagaaaataggcttcgaatttttttacattcgaatgttt
atgtttttttgagacagaagaagggggaaacctttctgatctgattctta
ttatttatgctgacggaaaaaCCTTTGTtattatgattcgaatgttttct
ctttcgtcggattcgaaaagtaaatattatgtctggggaaattcctctga
ttggaatgtttacaagaaactcttctaaagaggttttcgcggtttagcct
ctacaaaggagagttttagaaaatataaaatcgttctgtaaattacacaa
tactattatgcattatgcaatatgcattatgttttatgcatttcgTACCT
GCCGTGAAAGCAATGGCTAGTTTTTAGTTCATATTTTATTCTTgtgatat
tttaagtttttatctGGTAACACTCTGTTTGattttctaactgtcaaaat
tTAGTTGTACAGAGTGTGAAGTGTTGGgaatttctaaagaaaatgtTACA
ATGTGAACTAAAtcaattaatttaaatttttttttaaatgacaacCCTCG
ACGGCTACgaggaatgaaaatttattcaaattacagaaacattCGAGTAA
AGGAGACTCGGTTTAAGAGAGTTTCTTAGCTGAAAGAATTTTCAGtgtaa
aaaacttaattttcgcaaagattaaatttcgcgaatttagcGAGAGATaa
gagtttgaaaattttcgcgaaaaagacgaaattcgcgaaaatttgcaaaa
tataatccccgcaaaaatttATACCCTTAAGCTAATTGTAATAGAGTCTA
CTTTGTGTAGAtaatttaatttctttaaattttcctatatcttacaaaaa
taaacaaaaataatctgTTCACAAATACTGTGACAAGAGTCtaaataaaa
gaatttcattaaaattacaATCCCAAAAATATTATCTTGAAAACCTAATT
TAAGCTGTTCAAAAATTATGAAAGGTCAAACCATTATTACTTCTTTAAAT
GTACCCCTAATTATCAGGACGAAAAGGGACCAagatcaagttttattttt
gcaacGTAAATGTCGGGGGAATCCTAGTATAGggtttcagattttttgta
aattccTCACATGGTCCAGcgcaaaacctccaaattttttttgtataatt
CTTATCTTAAGTCAAGATATTCAAGTTACAATTTTTTGACAATTGACAAT
taacaagaaaaagtgaaattttgaagtAAGATCCGCGCTAAAACTCATTA
TAGGgatttcaaattgtgatatcttgatttaaaaaaagaataacacaaaa
atattttgctcagAACAACGGAAAGAAGCTGCAGACAAAAGATCTAAAAC
TAtctgattacacgttttttttaataagaataccttatcggccaaaactt
agtcggccctaattttagtcaccaagccaaaatttagtcacttagggccg
gcCAAGTTTTGGCTGATAAGTTAGTGTTTTTTGGTttagcgaccgtagta
cagtggtagagcatccggctacggttcgcaaggttgtgggttcaaccccc
agccgggtcataccaaagattcccaaaatggtaNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcccctaccttcgggt
agatagctatcgaaagaggagccttcgggtcgcctccgactgcggtcgca
gacttacttactttggATGACGGTCAAGTATTTTTAAGAAATAggcaaaa
ttgagggtgaaatattcttaacatattcttactGTTTTAGACTtgaattt
tttacaaacatgagaaatgatcaatttgaacTTTTGAACGAACATTTTga
gctaaaattacatttctccacaagtttaaattcaagtctaacaaaggaag
cagtttttctgttaaccaaatacaaaatgactgtatttttatcaaattct
gtgaaactcaccctagagggtattcttagggtattcttacgatttggcca
attttcaccctgatattcttatataagatattcttataaaaaaagcgtgt
atgccTATAAAAATCTACTCTCTCGCTACAGATTTGAAAAGTTTGCCCTC
AAAAAAGAGGTCACGGAATGGACTGAATGGGGACTCGAGAAACAgtctaa
aattataaaaaaagttctgtattttacaaaaaaaaacataaccaTTAAAA
AGGATCTACTGACATCACCTGTTACTTTTCGTTTTTGCTGATGAAGCCCG
CTGCTGACTTTTCGATGAATGTTGTTCATGTTTTTTGCGAGTTTTTTTAA
GCTCATTGATTGAATTCCAAAGTCCGTCACATTTATGATCCAAGTCTTTG
AAACCCGTCAACTTATTCAAACTGGTCGAGTAAAAAATGACATCTGAAGT
AACCAATCTATAAAGAAAACATAATatgattttcaagatttttttaaatt
gtctccTCCAACAGGGAAATATGACCTTGAAACAGACCTTCATTCTCGAT
TAATCAcgcctttttttaaaaacatcttcCAACCGGGGATTTTCGGCATT
TATGGTTACTGTATGACCATACACTTGAAATCATATTGCTCTTAAAGGGG
GCCTTAAACGATGGATAAAGCATTAAATACAAGTGAAAATATACGAACCC
GTGCTGAGGCCCTCCATCATTTGATACACCAAAATCCGCTAGCTTCGACG
CAAGACAGTCTTTAAATTTTCTTCTGACGTCACGAAACAGGACTTCAAGT
TGTTGTTCGGACAAAATGGCGGCCATTGTTTCACGCAACTTCTTGACTTG
CGCCACAATATTACGCATGGTTTTCGAAGGCATCGGTGGTTTTAATTCGT
ACTGCAATAAAATATTCGCAAATTAAATGATATTTCCAGGGGAGAGTTAT
CATGGCAAAATAACCGACACTAACCGAAAATAACCGTTGTCACACAGGGT
GTCTTTTTCCGAAACACAATGCTAGggtcaaaaaaaagaagaaagaaatg
cactgtaaggtaCTAAAAAGGCTTGAAAATCCTCAACGGAACTAGCCTTC
GTTTGTGGCGTTTGTGGCGACAGAGTGGGGATTAAGCGGGAGTTGAAAGT
TTAGCAGTTCTACAGGATTGTAGTCGATGAGTAGCTGAACAAATACGAAG
AAAAAGCGGTTAGTACCTGTGATAAATACGAATTGAATATTTCCTCCATC
AGATTGGTTATTTTACATAATAGTTCGTGTCTGTGATTGTTGTAATccta
tataaaatataaaatataaaatattccTTCTTTTAGCATCTAGTAGTAGG
AAGTCcatgaatatttttctccattttcaaGGTGGATTTTCTTCCACAAC
ATCTATTAGTAAATTTTCAAGATTGGATGGTTCTTTTTCGAGGTTTTCAT
GGTCCCGTAGACACCATAGTACATttgacgctctttaattcgattttcaa
ggggaattcaattttcattgaataaggaAACGTATCAAATAGAAgtgcgt
cgtttatgagagtttcttgttgacggtgactttcaatattatcgaataat
ggagggGATGGAATATTTGAACGttaaattagagagcgtcaattgtgatt
gaaggtagagagtctatcaccatatttccctaagACCCTGCTTGGAAGAG
CTTGCGATTCGAACACAGTNCATTTTATAtctatacagggggtggacgaa
catttcatATCATAATCTGAGAAAAGGGggtgtgttttcatttttccaag
ggggtaaaaagttattctaaaatttctagtaggtaaaagactgattctag
ttcgtccaccctcacttttaaGTATGAAAAGAACTTTTCCAAgggttttt
ttggaaattttacctttttttttaatggatcAGCCCAATATTGACCACTA
TCTTTGTCTAGTTCAGATTAACTCCATGTAAATGGTATAATAAACTTAGA
GCAAGTCTTTGGGCAGACTTAAAAAATGATTTGTCGTACAATTTATCTTT
AGCAAACCCCTGGAagcgttttttttcttcaaaatttaaattttgggaCT
TTGGTACAAGTTTCGCCAAAATGAGGCTAAAATCTTTTGAGCAGCAGTCG
AAAATGGTTGGAAGTGGCTAAATTTTTGCACACGTTccatacttttcaaa
aaatgcaatatttgtAGCCTGAaacaagttttcaatttttactcCAATTT
AATCTCCATAAAGTTGGATGAATTCTAGCCCAGTGTGTGTTGTGCACGTT
CGATTTTAGTCCAACGACCttccaaatcaaataaaaatcaaatcaaatac
tTAACTGGCTGTCTTAGCCTCATTCTCTCTTTGTCTTTGGAATATCATGG
GGATTTCAACCAGTTGATACCCCATAACTTATAAAACTGTTAGACTTCGA
ATAACTGGAAGAAAATAGCCTCTTATCCACGGGAATAAGAAACCACTTAA
AAAGAGGATAAAACGGGGAAAGTCGATTTACTTTGATTAACCGAGAGTCC
ATTGTACATTACCATATAAAGGTGAAATTATGGCTTTTTTGACTAAGACC
TGACTTTGAGCTTCTATTTTTCAACCATAGTATTGTACTTGTAAAGAGCT
TGCAATGTCAGGTGTCTATCTAGTCTAATACTGTACATTTTTTTATCAAG
CTCTGCCACTTGTCATGATCGGATACGTTAAGTGAGAATACACAgattgc
aaaattatatcaatgcaatcaaaacatgtgattactcgaaaaagttcacc
cgATTCTATttccatgttacttgctttacaactcaACAGCTGATAACTTT
TTTAGTGGCAATACATTCgaatcaatcaaaaataaatctcatGTAACATA
acaacaagcacataaaaatttctagtaaaaagcgtgatttgtcttcagac
ttttgcaacctgtgtattcaGGTCCTAAGTAATCGTTATTGCATCTTACT
ATTTTAAtgtattgcaaaaaaaaaaaaaaaaaaaaaaGAACTTTATCACC
AGAACATTGGAATATTTCTAGACAGGAAAGATTTATTGTTCTTAAAATCT
TTAAAAACAGCTCAAGGGACTTTTGATCTCGATCTGTAAATCTTACAAGA
AAGAACTCTAGGTTGGACGGCATACTTAGGGCTTCCATAAAATAAGTTAT
AGTACAAGACCACGTTTCTACactacggttccgtttcgctccgaaacgaa
attaAGTCATTccattggttagaagtgacgtaaaacttgagTTTAACCAA
TGGAATGACTTcattcgtttcggagcgaatgTGACCGTGGTCTAAGATTA
CCTATTCGAAAATACGATACGATATAGTTATGAATTCGTTTTAATGAGTT
TCCtgtaattaaaaaaatgaaatattagtAGCTATAAAATTACgcaaatt
aaaaaatcatcCTCTCAGTTTCGAAAAGAAAGAATAGgcgaaaaaggaag
aaaatggTCTGTAGAAAAGACTATAAATAAGGACAAGGACCACTGAGAAA
TCATTCAAAGCAAAAGAAGCCATTGACTTGACAAGAAGaaaaacacacaa
aacacacacaaaacaaaatgaaggGATTGACAACACTCATTTGCATTGCT
GTAGTAGCAGGTAACATTTTACTTTTTCTCGACATTTGAATACAAAAGAT
GGTTCAAACTTTAAACCCGTGCATCAATTTGGGATGATGTGAATTTCTCC
GGTATAGAGGGAAAGATTAAGTTAATCTTAAGCGTAACGAaataaaaatc
acatttaaGTAGCACCGGGATGGAAAGATTTTAACTTTGAATCTTGACAT
TTTGTTTACAGTTCACAGTGCACGTGGAGCGGTCATCAGCAACGACATAA
ACTGCAAGAACACGAACGATAATTGCGATAGTTGGGCCAAAAGAGGTGAA
TGCCATGAAAACCCAGCCTACATGATTGTCAGCTGTGCTCCTGCCTGTGA
CGTCTGTAAGTACATACGCTACTAATATTATCTCGTTGTTATTGCAGTAG
AATCTCTTTACTTCGaacctccttaactcgaacaagttttcttgcCCCAT
CAGTTAACCTTATAAGCCTTACTTCATAACTCCATAATACTCAataattt
ccttaattcaaacaaATTTCTGTTTCCCGcccgtgttcgagttatggaga
ctcgacTGTATAAGGAGCGTTCCCACAAAGTGTTACTTTTTTAAGTCAAG
AAGACTTGCTTGATATCAGTTGATTTAAGCTAGGTTTGTTACAATAGGTT
CCTGTCACACCTTAAAAATCACATGATGAATGTGAAAAGAACAAATCCTT
TGGCCCTGAAAAGCTTTAATTGTATGTTTACTTTTAGAGAGTCGTTTGCA
GTAGCTTGGAAATTAACGGCTTTAAAATCAGACTTCTATAAATACCATTC
TTTTTATGGCAGGCTTTCATGGTGATAAACGTTGGTCATGCAGTTATTGG
GCAAGACGTGGAGAATGCACCAAAAACCCTTCATTCATGAATAAGGCTTG
TCCATCCAGCTGCAGTGCTCAAGCACAAGAAGGTAAGGCTACGTACATCC
TATCCTACCGTGTGCCTAATAAACGCCCTACGCTTGTTagttttttgatt
tcttccACACCCCGGACCATTTAAGGACCCCCTTTCACgtttatttatat
tttcagctatcaaaagaaaagtcccttattttgctctaaatagctaaatt
ttagtctataattaccttattttgaagtacaatttccaacccccaggTAA
TAAGTCCCCTCCcgtttatcaaaatttgaaaatattttcagctgtcaaaa
gaaGAGTCTCTTATTTGGTTCTAAATAGATAAGGTCTATAATTACCTGAC
TTTGAAAGTATTTAAAGGCACAATTTACCGCATTAAAACTCAAGTGAAGA
tctatttttgagatttaaactATCGCCAAACGATAATTCCCGATATCTGG
GTTAACCCGAacctattattattatttgtgtaaactatattttacctttt
tgatTCTTTGATTAATAGAACTAATTAAAATTCGATTGCTTAATGAATAA
TAAGGATCCATTTGCATCTCATTCGAACCATTACATAATGTTTGCATTTC
ACTTGTAGATAAACGTTTGGCAGGATGTTTAAATGCGTGCAGTGAATTCG
CATGCGCATCAGATACAAGCCTTCAAAAAGGATGTAATCAAATGTTTTCG
TGTACGCATGCGTGTAAAATGCGACACCTTGGAGTCACTGTCGGTAGCTG
CCGAACGAAATGTGAGCGCAACGGGCAATCTGGCTGCTTTCCGAAGGTCG
AGGGGTACACATTCAATTTGTGCGTCGCATGCTCAAGAGAAGGTTGCTCA
ACCTTTCCAACCGTCGACGAATGTAAAATTGGCTGTGACTACTTTTAAAA
TGGACAATAAAATCCAAAGATTGGAGGATTTATCTAAGGTTCACATATTG
TTTTCTTCAGTTCTTAAAAACgggttattttttattttgatgattcaATA
TAAGATAACATAAAACTTGAGGGATGATCTGAGGGTAATTTGAGATCCTT
AACCTACTGAAATCTCTGTCTAGCTTACCTTGCTATTTcttcaaataaat
tttacctTTGCTATATAAACTTAAGAAATCGTTTTTTGAGGTTTCGCCCA
GGACAAAAAACTTCGGACTTTCATGCCGAAGATCTTTACTTAAGCCATCA
GATTATCCTTTTGACTATATAATTCTTGTattaaacttcttttttttaaa
caatcttaattaaaaaaatatatttttcaagatATCCGACACTTGAAATC
TTg

Coding sequence (CDS) from alignment at sc0000128:2421..20073+

>TCONS_00011426 ID=TCONS_00011426|Name=TCONS_00011426|organism=Clytia hemisphaerica|type=CDS|length=1575bp|location=Sequence derived from alignment at sc0000128:2421..20073+ (Clytia hemisphaerica)
AACGACTTAAACTGCAAGAACACGAACGATAAGTGTGATAGATGGGCCAA
AGGAGGTAAATGCCATGAAAACCCAGTCTACATGATTGTCAGCTGTGCTC
CCGCCTGTGATGTCTGCTTTCATGGTGATAAACGTTGGTCATGCAGTTAT
TGGGCAAGACGTGGAGAATGCACCAAAAACCCTTCATTCATGAATAAGGC
TTGTCCATCCAGCTGCAGTGCTCAAGCACAAGAAGATAAACGTTTGGCAG
GATGTTTAAATGCGTGCAGTGAATTCGCATGCGCATCAGATACAAGCCTT
CAAAAAGGATGTAATCAAATGTTTTCGTGTACGCATGCGTGTAAAATGCG
ACACCTTGGAGTCACTGTCGGTAGCTGCCGAACGAAATGTGAGCGCAACG
GGCAATCTGGCTGCTTTCCGAAGGTCGAGGGGTACACATTCAATTTGTGC
GTCGCATGCTCAAGAGAAGGTTGCTCAACCTTTCCAACCGTCGACGAATG
TAAAATTGGCTGTGACTACTTTTAAAACGACTTAAACTGCAAGAACACGA
ACGATAAGTGTGATAGATGGGCCAAAGGAGGTAAATGCCATGAAAACCCA
GTCTACATGATTGTCAGCTGTGCTCCCGCCTGTGATGTCTGCTTTCATGG
TGATAAACGTTGGTCATGCAGTTATTGGGCAAGACGTGGAGAATGCACCA
AAAACCCTTCATTCATGAATAAGGCTTGTCCATCCAGCTGCAGTGCTCAA
GCACAAGAAGATAAACGTTTGGCAGGATGTTTAAATGCGTGCAGTGAATT
CGCATGCGCATCAGATACAAGCCTTCAAAAAGGATGTAATCAAATGTTTT
CGTGTACGCATGCGTGTAAAATGCGACACCTTGGAGTCACTGTCGGTAGC
TGCCGAACGAAATGTGAGCGCAACGGGCAATCTGGCTGCTTTCCGAAGGT
CGAGGGGTACACATTCAATTTGTGCGTCGCATGCTCAAGAGAAGGTTGCT
CAACCTTTCCAACCGTCGACGAATGTAAAATTGGCTGTGACTACTTTTAA
AACGACTTAAACTGCAAGAACACGAACGATAAGTGTGATAGATGGGCCAA
AGGAGGTAAATGCCATGAAAACCCAGTCTACATGATTGTCAGCTGTGCTC
CCGCCTGTGATGTCTGCTTTCATGGTGATAAACGTTGGTCATGCAGTTAT
TGGGCAAGACGTGGAGAATGCACCAAAAACCCTTCATTCATGAATAAGGC
TTGTCCATCCAGCTGCAGTGCTCAAGCACAAGAAGATAAACGTTTGGCAG
GATGTTTAAATGCGTGCAGTGAATTCGCATGCGCATCAGATACAAGCCTT
CAAAAAGGATGTAATCAAATGTTTTCGTGTACGCATGCGTGTAAAATGCG
ACACCTTGGAGTCACTGTCGGTAGCTGCCGAACGAAATGTGAGCGCAACG
GGCAATCTGGCTGCTTTCCGAAGGTCGAGGGGTACACATTCAATTTGTGC
GTCGCATGCTCAAGAGAAGGTTGCTCAACCTTTCCAACCGTCGACGAATG
TAAAATTGGCTGTGACTACTTTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006412XLOC_006412Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011426-proteinTCONS_00011426-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011426-exon-sc0000128-1491911889:2421..2535TCONS_00011426-exon-sc0000128-1491911889:2421..2535Clytia hemisphaericaexon
TCONS_00011426-exon-sc0000128-1510915933:2421..2535TCONS_00011426-exon-sc0000128-1510915933:2421..2535Clytia hemisphaericaexon
TCONS_00011426-exon-sc0000128-1575043694:2421..2535TCONS_00011426-exon-sc0000128-1575043694:2421..2535Clytia hemisphaericaexon
TCONS_00011426-exon-sc0000128-1491911889:18683..18802TCONS_00011426-exon-sc0000128-1491911889:18683..18802Clytia hemisphaericaexon
TCONS_00011426-exon-sc0000128-1510915933:18683..18802TCONS_00011426-exon-sc0000128-1510915933:18683..18802Clytia hemisphaericaexon
TCONS_00011426-exon-sc0000128-1575043694:18683..18802TCONS_00011426-exon-sc0000128-1575043694:18683..18802Clytia hemisphaericaexon
TCONS_00011426-exon-sc0000128-1491911889:19379..20073TCONS_00011426-exon-sc0000128-1491911889:19379..20073Clytia hemisphaericaexon
TCONS_00011426-exon-sc0000128-1510915933:19379..20073TCONS_00011426-exon-sc0000128-1510915933:19379..20073Clytia hemisphaericaexon
TCONS_00011426-exon-sc0000128-1575043694:19379..20073TCONS_00011426-exon-sc0000128-1575043694:19379..20073Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000128supercontigsc0000128:2421..20073 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.100943	0.228718	0.242269	0	0	0.104873	0	0.0671807	0.336619	0	0.102791	0.720257	176	195.593	11.6422	29.3854	2.18631	2.25738	0.196159	0.830478	0	0	0.0688262	0.23523	0.528306	0.241101	0.227913	0	0	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR003582ShKT_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00011426 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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