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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00011427 ID=TCONS_00011427|Name=TCONS_00011427|organism=Clytia hemisphaerica|type=transcript|length=549bp
AAGACGTGGAGATTGCACCACAAGTCCTTCATCCATGGATAAGCTTTGTC
CATCAAGTTGCAGTGCTCAAACACAAGAAGATAAACGTTTGGCAGGATGT
TTAAATGCGTGCAGTGAATTCGCATGCGCATCAGATACAAGCCTTCAAAA
AGGATGCAATCAAATGTTTTCGTGTACGCATGCGTGTAAAATGCGACACC
TTGGAGTCACTGTCGGTAGGTGCCGAACGAAATGTGAGCGCAACGGGCAA
TCTGGCTGCTTTCCGAAGGTCAGGGGGTACACATTCAATTTATGCGTCGA
TTGCTCAAGAGAAGGTTGCTCAACCTATCCAACCGTTGACGAATGTAAAA
TTGGTTGTGACTACTTTTAAAATGGACAATAAAATCCAAAGATTGGAGGA
TTTATCTAAGGTTCacattttttttcagttcttAAAAACGGGTTATTTTT
TATCTAGACAATTAAATTCTTTTATATAAGATTACATAAAACTTGGGGGA
TGATCTGAGGGTAATTTGAGATCCTTTGCCTACTGAAATCTCTGTCTAG Run BLAST on NCBI transcript from alignment at sc0000128:3036..4179+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00011427 ID=TCONS_00011427|Name=TCONS_00011427|organism=Clytia hemisphaerica|type=transcript|length=1144bp|location=Sequence derived from alignment at sc0000128:3036..4179+ (Clytia hemisphaerica)
AAGACGTGGAGATTGCACCACAAGTCCTTCATCCATGGATAAGCTTTGTC
CATCAAGTTGCAGTGCTCAAACACAAGAAGGTAAGGCTACGTTCATCTTA
TCCTGCCGTGTGCTTAATAAACGATCCACGCTTGTTagttttttgatttc
ttccACACCCCGGACCTTATAAGGACCCCTTTCGCgtttatttatatttt
cagctatcaaaagaagagtcccttattttgctctaaatagctaaatttta
gtctataattaccttattttgaagtacaatttccaacccccaggTAATAA
GTCCCTCTCCtgtttatcaaaatttgaaaatattttcagctgtcaaaata
AGAGTCTTTTATTTGGTTCTAAATAGCTAGGTCTATAATTACCTTACTTT
GAAGGTATTTTAAAGGCACAATTTACCGCATTAAAACTCAAATGAAGATC
TATTTTTGAGGTTTAAACTATCGCCAAACGATAATTCCCGATATCTGGGT
TAACCCGAgcctattattattatttgtgTAAAATGTATTTTACCTTTTTG
ATTCTTTGATTAATAGAACTAATTAAAATTCGATTGCTTAATGAATATTA
AGATGCCGTTGATTGGTGCAAGATCCATTTGCATCTCATTCGAACCATTA
CATAATGTTTGCATTTCACTTGTAGATAAACGTTTGGCAGGATGTTTAAA
TGCGTGCAGTGAATTCGCATGCGCATCAGATACAAGCCTTCAAAAAGGAT
GCAATCAAATGTTTTCGTGTACGCATGCGTGTAAAATGCGACACCTTGGA
GTCACTGTCGGTAGGTGCCGAACGAAATGTGAGCGCAACGGGCAATCTGG
CTGCTTTCCGAAGGTCAGGGGGTACACATTCAATTTATGCGTCGATTGCT
CAAGAGAAGGTTGCTCAACCTATCCAACCGTTGACGAATGTAAAATTGGT
TGTGACTACTTTTAAAATGGACAATAAAATCCAAAGATTGGAGGATTTAT
CTAAGGTTCacattttttttcagttcttAAAAACGGGTTATTTTTTATCT
AGACAATTAAATTCTTTTATATAAGATTACATAAAACTTGGGGGATGATC
TGAGGGTAATTTGAGATCCTTTGCCTACTGAAATCTCTGTCTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00011427-exon-sc0000128-1491911889:3036..3115 | TCONS_00011427-exon-sc0000128-1491911889:3036..3115 | Clytia hemisphaerica | exon |
| TCONS_00011427-exon-sc0000128-1510915933:3036..3115 | TCONS_00011427-exon-sc0000128-1510915933:3036..3115 | Clytia hemisphaerica | exon |
| TCONS_00011427-exon-sc0000128-1575043694:3036..3115 | TCONS_00011427-exon-sc0000128-1575043694:3036..3115 | Clytia hemisphaerica | exon |
| TCONS_00011427-exon-sc0000128-1491911889:3711..4179 | TCONS_00011427-exon-sc0000128-1491911889:3711..4179 | Clytia hemisphaerica | exon |
| TCONS_00011427-exon-sc0000128-1510915933:3711..4179 | TCONS_00011427-exon-sc0000128-1510915933:3711..4179 | Clytia hemisphaerica | exon |
| TCONS_00011427-exon-sc0000128-1575043694:3711..4179 | TCONS_00011427-exon-sc0000128-1575043694:3711..4179 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000128 | supercontig | sc0000128:3036..4179 + |
Blast
The following BLAST results are available for this feature:
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