TCONS_00011459 (transcript) - C. hemisphaerica

Overview
NameTCONS_00011459
Unique NameTCONS_00011459
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1449

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00011459 ID=TCONS_00011459|Name=TCONS_00011459|organism=Clytia hemisphaerica|type=transcript|length=1449bp
acccatttttacATCTCTAAAATGGCATATTTTAactgaaagaaaacaaa
aaggccAAACAAGGTTCCCATTGACTTTATTAAAATGACCTTGGTAAAAG
TAACCTTACCCTTTGATGATCTTTAATCATGCAGGATTCACAAACATTCA
CACGACATCCATAACAAAATTGATTcgtaacatttctttgtttacaCTTG
CAAACACCCATCTTCTTTGATTTCACAAGgtgatgaatgaatgaatggta
AAANTTACACTTGCAAACacccatttttttttatttcacaatGTCATGTA
ATGAATGGTAaaaacttggtattttttcagcaaaatgCGGCAAAATTGCA
CTACCacgtcttcaaaaataaatctaccaTCTTTGTTATGTCTCGCTTAT
TGTTTACTTTTGAGCTCGTTTACATTGAAATTTCCGGGTCAGcgaagcaa
aaacatttttaggctcgtGTGTGGTGGTGGAGCAAGACCCACAAACACAT
TTGACATGAAGCTGTTGTGGAGCGGAGCCAGCAAGAGAAATATGAGAAGT
GTATCAATTGGAGGTGCAGGACTAATTGTTGGAACAGCCTTATCAGTCAT
TATTCCAGAGGGTGTTCACGCTATGTATGATTCAGTCCTACCACACAATC
ATGGCCACGGTCACGAATCACATGCACACGGGCATGCGCACACTCATCAG
AAGAGGTCGTTACAACAAACAAACGAACAAAAACAACTCATCATTGATAA
CAATTCACCAAGTGGCGCTTGGGAGAATTTCAATTCACGGTTACCAGGGC
TACCAGAGGTGGAACTTCATTCTATGATTGGCATTTCATTGAGTTTAGGG
TTCATTTTCATGCTACTGGTTGATCAGCTGTTTGGTGGTGGCCATTCACA
TGGTGGCTCTGacgGTGGCAACAGGAAGTCAGCCACTGCAACTTTGGGGC
TCTTGGTACATGCTGCTGcTGATGGTATAGCACTGGGAGCGGCAGCTTCG
ACGACAAGATCAGATATCGAAATGATTGTTTTCTTTGCCATTATGTTACA
TAAAGCGCCGGCTGCTTTTGGATtgtcttcttttcttcttcatgaGAATA
TGGAACGTAACCGGATACGAAAAcatttattggcattttcactGGCAGCG
CCTATATTTTCTATGCTGACGTACTATGGTTTAAGTGCAAGTGGTAAACA
AACATTTACATCATATAACGGTACAGGACTTGCCATGTTGTTTTCTGCTG
GTACTTTTCTATACGTTGCCACCGTTCATATATTACCTGAACTTTTATCG
CAACCTTCCAATTCATTAGATAACTCATCACAGACTCATGGGAAATTAAC
GCGCAAAGAATTATGTTATTTGGTTATAGGTATTTTTACACCTGTCATAC
TGGGTCTTTATCATAAACATTGAAATACTCTCAATGTCTAACttttatt
Run BLAST on NCBI

protein sequence of TCONS_00011459-protein

>TCONS_00011459-protein ID=TCONS_00011459-protein|Name=TCONS_00011459-protein|organism=Clytia hemisphaerica|type=polypeptide|length=372bp
MVKTWYFFSKMRQNCTTTSSKINLPSLLCLAYCLLLSSFTLKFPGQRSKN
IFRLVCGGGARPTNTFDMKLLWSGASKRNMRSVSIGGAGLIVGTALSVII
PEGVHAMYDSVLPHNHGHGHESHAHGHAHTHQKRSLQQTNEQKQLIIDNN
SPSGAWENFNSRLPGLPEVELHSMIGISLSLGFIFMLLVDQLFGGGHSHG
GSDGGNRKSATATLGLLVHAAADGIALGAAASTTRSDIEMIVFFAIMLHK
APAAFGLSSFLLHENMERNRIRKHLLAFSLAAPIFSMLTYYGLSASGKQT
FTSYNGTGLAMLFSAGTFLYVATVHILPELLSQPSNSLDNSSQTHGKLTR
KELCYLVIGIFTPVILGLYHKH
Run BLAST on NCBI

transcript from alignment at sc0000128:322257..337678+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00011459 ID=TCONS_00011459|Name=TCONS_00011459|organism=Clytia hemisphaerica|type=transcript|length=15422bp|location=Sequence derived from alignment at sc0000128:322257..337678+ (Clytia hemisphaerica)
acccatttttacATCTCTAAAATGGCATATTTTAactgaaagaaaacaaa
aaggccAAACAAGGTTCCCATTGACTTTATTAAAATGACCTTGGTAAAAG
TAACCTTACCCTTTGATGATCTTTAATCATGCAGGATTCACAAACATTCA
CACGACATCCATAACAAAATTGATTcgtaacatttctttgtttacaCTTG
CAAACACCCATCTTCTTTGATTTCACAAGgtgatgaatgaatgaatggta
AAANTTACACTTGCAAACacccatttttttttatttcacaatGTCATGTA
ATGAATGGTAaaaacttggtattttttcagcaaaatgCGGCAAAATTGCA
CTACCacgtcttcaaaaataaatctaccaTCTTTGTTATGTCTCGCTTAT
TGTTTACTTTTGAGCTCGTTTACATTGAAATTTCCGGGTCAGcgaagcaa
aaacatttttaggctcgtGTGTGGTGGTGGAGCAAGACCCACAAACACAT
TTGACATGAAGCTGTTGTGGAGCGGAGCCAGCAAGGTTGAAGGTGAGGGA
CTGAGATGGGGGAGGAGTGGAGGTGGGGGAGGAGTGGGTGTGGGGGAGGA
GTGGGTGGGGGAGGAGTGGGTGTGGGGGAGGAGTGGGTGTGGGGGCTTTG
ACGATCACTATCACTTAGGTAGGGTTGCAGCTTGAGAGTATGATAAAGGG
CCAAAGTCTCTCTTAAGAACACcaggttggcaaacgatatcatactccag
gatgcattgGGCTGTTCCAGAAAAAAAGAGTCACCCCCTTGGACGACACA
ACTTTTAAAAAATAGTTTTGTTACGAAAATCTTGGTATTATTTAGACAAA
AGGTAATAGAATTCCAGAGATTTCACCCAAATCTTTGGACAGAGTAttgg
aaatttgtattttttgttaaggcggcaatcacaattatcttcatttcgcg
tcctcgttggatctaaaaagtgagttggtcggtcggtcggtagtaaaaat
tttcgggttttcttaaaattggtctGTGAGGCGGTAAAAGGTAAAAGGGC
GTTAACTGAGGCGGCAGGAGGCCCAATCGNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGActcaa
ttttactcaattttcaggagtcggtcgggcgacgcgaaacgaagatattt
gtgattgccgcctaaacaaagtatcggaattccgagtattttgttttgaa
ggatattttggactttgtaaaggaaattccaaaaatttgtcTAGTTTTTT
TGTTGTGGAAATTCCGTGTCGTCCACTAGGGGGTAATGGACTAAAACTGC
AATGGCCCATTGCAAGTGATATTTTTCAATCCGCAGACCTACTAGCCCCc
gtcggttattatcagttacgGTTGGAGCTTGAGAGTCCCTACTACATGCT
CACCTACTATTTATTCAGATCATCTTGTTGTAGATTCAACAcatttgaat
tttgataatcAATTCGGAGAAACTGAAGAACGTAACTTAATAAGCAAATT
TGACCTCTACAACTTCCAAAGTGATAAAATTGACTGGGAAATTATTAACA
AAGAATTAACAGACATTAATTGGTCTCAAGAACTGGACACAAATCTATAT
TTAACCCAAATTGTCAATATGCCAACTTCCTTGAAAAATGTCTTCTGATT
GTGAAAAAGCATTTGCCAAAGAGAAAACctccaaaaaatttttcaaagat
tccaagAGATCGTCGTATTCTTATGAGAAAACGTAGGTAGGTGATAACTA
CTATCCGTATATCTAACACTCCTTCTACTCTTTttcctttcctatctttc
tACTGTATCTTTGCTTCTACTGACTgtttgagacttagtttctcatttct
gactaagTTAtgatacctgtcaatcatttttcgaccaatcaaatcgtCGC
ACCGGgtcggattcgaaccaccactaaagaaagaccttcggatTCGGAAG
CCAacacgctatccgttgagccacactcgcacatcAGAAGacgaaatttg
gaaatacttatagaatgacaaaaaagacgggggtaatgttattataatat
gggtaaaagtaccccttttttaacctgactgaaattcgagccgttaNNNN
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NNNNNNNNNNNNNNNNGCTCAGTTCTGGGCCCCCTCTTGTTTCTGGTAAT
GATTAGTGACATCAACGAAAAGATTAAACATTCCATCCTCTCATCTTTTG
CTGACGACACAAGACTTTTATGAAGGCAATAATATATTGTATTGCAGATG
TGAGTCTGCTTCAAGATGATCTAGACATTGTCtatgactggacatccatc
aacAATATGGAGCtcaatggaaaaaaagtttgaacNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCTGG
GTATCCTACTCTCAAACAACCTGTCATATGAAATGCACATTCAAACGATC
ACTGACAGAGTCAAGGGTATAAGTGCCTGGATATACAGAACCTTTAAGTC
CAGAGATAAATCAGTAATGATCACTCTTTGGAAGACATAGGTAGTTCAAC
ATCTGGAATACTGCTCCCAGCTATGGTCTCCTACAAAGCGATCCCTGATG
CAAGAACTGGAGTATCTGCAAAAATCCTTTATAAAAGGGATCCAACTTCN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNCAACTGgtgccaaattttaactatg
gtGAAGGGGAAGGCGGTATTTATTCATATACAAACCAACGCCTGGGAAGA
AAATGCCACCTCAAACCAGTGAATACATTGAACAAGAACATTTGGAAGAG
CTGCCTTTCAGACACCGGTCCAAGACTATTCAATGTGTTACCAAGAAAAA
TACGTGACATGACCAAATGTTCctaaaattccttcaaaaaacaacttgat
caatttctcCAAGATGTTCCCGACCAGCCACTGCTCCCTGCCTATCTCCC
TTACAGGATGGCTGATTCGAGATTTTGCTGAAACACATCAAAGTTTTAGC
TCtttgaatagaaaaaaaaatgagaGTCCCAATATAAGGCCCAAGGCCTT
CTTAGAGGCATTCGTACCCTGTGAgacttaccgtcaactgctccaacttg
ggacgagtgtacgcaacatgggacttgttgatatctggcctgtattttca
cttattgttaaatctctttgacaacaaatttgttttgataactcttccaa
gtttatcaatcatactttctgtcataacatgtcacgataactttcactga
tagcgcaccctttttaacttttgttttcattcaaaatgaccggacgccga
atggagaattagagaacgtcttccgcctaaccgcctaccgcccaatggga
ttaacaaatagcgagtgtgtaacttgccgcgcgagtgacgtcaaatgctc
catcgtttcgccactaatttggtcttctttgttCCTGACACTCgcgcgtg
ttccactacggattttttcatatttcgatttaaaagcctactcgctgcga
aagagaaatcgtgtattttttaatacgcggttcattaaactcaaatcaaa
tgactttggaggttcggtgaaatggtggtggaatggctgtcccatgttgc
gtaaaatagtcccaagttggagcagttgacggtaacttAGGACTCTGTAG
GGATCATTATTAGGGTTTTGGGagctttttgttaattttaagGGGTCTGT
GTAAATTACACACTGTCTATAGTACTATAACTATTTGTGAATGACGATAt
tctgccgtgtctcgttggcgcaaTCGGTTAGGCactgggtttgtaaacca
aggttgcttacATTTGGTTGATCGAGCCaaggtaccgtaagttggtctag
aatgtcgacacccttctttagagataggaatgcATGATGGGAAGGTTAGA
ATCACTGCACTGATAGTCAAAAGATATAGctaaccaaagaaaaatatttt
caatcagtgattccgaccttcccaATAATCctttctctaaaaaagggtgt
caaaattagaagacaggtgtcaacattagaccaacttacggtaggaGACC
TATTTCACTGGtatgggcaaatttcagaaaaatacttagaaaacagttag
aaacacttgagaaagtcagaaagtcaggatagaagatactccaggatgca
ttgTCTCTTATTTCCCCCCTATGATacatgggatcatccccccccaggaa
gatggggggggaatcagattttggtgccaggggggaagtgaaaatttcaa
gcttgatggggggagaaaggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATTGGGGGGAGCa
caaattttaaagacaggtgggggggaaaggccagatgggggattttagct
catattaggggggaccaaaaagctggaggacgccaTGTGATATCGTGTTT
GCCAACCAGGGCACCAGTAGTTTCGATCTGACAAGGTGGAGTACAGGACC
TGCAGAGCAGACAACGTAGTAGGTAGTAAGGGTTAATTTAGACCTGCCAA
GCGTGGGACTCATGCATTTCAATACTTgtatcacacaatttttgaaaaac
ttgattgattttggatttttgaaaaaactttctccGATCTCCCGAATTTC
GGCAAAAAAGACTCCCtgatttttcgatttccaaaaaaatatttcctcaa
tttcaagaaaaatcttTCCCGTTATTCCAGTTTTAGGaaaaagtttcccc
gattttctgattttggaaaatcagaaaacccatagtttctagaggggtca
agacccccccttaggtaagaggacccccccttaagtgctaaccccccctt
aggaaattaatttaaaatttcacacccccccttagaaaatcagtatatAT
GAAACTATTGTACAAGAGtcataattcaaggaagatcccccttatctaag
aagacccccccccttaggtaagaagaccccccttaactggcaacccccct
taggaaagtcaaacttttaacaccccccttgcttttggttcatcaaaacc
caagaccccccccctaaatgtaggggggtagaaactatgaaACCGACTAA
GATTTCGGatttcacttggaaatttttatcTAACGCAAAATAGACATCTC
AAGCTGGCAGGTCTGGTTAGGTTGTATATCAGATAGACTAAGAATAGTCT
TATATGGGGAGAACAGGAAGTTCTCTTAGAATAAAATTACTTCAGCATAA
GTTTTTTGATGATAACGTCATATAATAATCGATAGCACAGTTGGGAGAGC
AATCACCcggcaagcgagaggtcgtgggttcaattcccactcgattcgtt
acctttgagaaaactgggaagtacattagtgcaggatccgttgattcatt
acctATAAGTAATACGCACTTGATTTCACACAGTCATATaatagttgttt
gggagaacGCAACGTtcttttaattttgaataatttactCCAGCACGCAG
TAGAAATTGTTTTAATGATAGCGTCTCATAATTGATTTATCTAATACAAC
ACAGTTGTTACCTGCATGATCACCTATGTACACTGCATAACCGTTTGAGT
ACGTACCGCGGCCAGTACAGCACACCACATGGCCAGTACGGCACATCACA
GTGCCAGAAAGGCATATTTCTCTATCTTTATGTACGTTGCGTGCAAACAA
CGCACCAAGTCCCGGGACGTCCGGGGCactaagtttcaaaataaatgttt
aaaaaatccaCGGACATAATTTAACAAGAAATCCTCGGACTGTCCGGGGT
ATTGGCATGGTCGTTCTCTAGGCGTAGGTAACTGTTGTGGAGTGATTATT
CAATAGGCCGtcgcgttctccaaaacaactattgggCTGAGGGAAATTAA
TGTATGCTGGAGTGGAGTGATTCATTATTCATTAGACCATTTccatatga
cgtcatttttaccCACGATCAGCCATTTTTCTAAGAGATGGAAAAAAGAA
TATTGTAACTTGTAACGCAAACCAAAAGACTTAACTTGCAACAGCTTTGT
TTATTTGTgttttggaaaatgtttgaaatgttATATTACGTTAATCAAGC
AAAACAAAGctaattaaataattttttgtgaagatgaagatgaaaaagtg
aaCCAATTTTCGCTTTTATTACAATTTATTGGCAAAACTGGGAAAATTAG
AACCTGTGAATTATAAAATTGgccatttttgataaaaaaattgaaaaaaa
atgtgttcAAAGTAGGGCAAAAATTTTCACCAAGGGTTCAGAAAAAAGAC
TCACAGACAATCGACAGAGATAAAAAGTTGATATCAAAATTAGCATTGGA
TAGCCTTTTCTGTTCTAGGAAAAATATATCTTATATAGGTATATACAGTA
ATAAACTTTCAGGTGAGAGCAGTACTGAGCGATCTTTTTGgtataaaaca
aagaaaatagaTAAAGAATTTCATCAATTGTTGGCTGCAATCAGTTCCAT
TAAAATGCCAAAGAAATTTGTTTAGTCATCCTCATACACTATGAACTTCT
TTTGCTAATTAAGAACTTATGTTAATTAATTATGAACTTCTGTTGCTAAT
CAAGATGCCGTACAGTATTGAATAATTaatgatgatgaaaaaaattaaca
cttaaaataattatgcatttaatgtatttttcttttattaatgCTGAAGT
CTTTAATTGTTCAACAAACATCCTGATTAGCAATCCTGATCTTAGATTTT
TCAAGGTGATTTTGTTCATTTTACAGAATTTCCTCTGGGGTCATTGAAGG
TTTCCAGGGGAAACTTATAGATTgacatcaaaattatttttaagtccttt
tatcaaaaaatttcaaattccagGGGTTTCTAACCCTATATTTCCCTGAA
ATAAATAGGGCCAGGTTGGTGAAAAATTCTGTCCATACCCATGTATGATT
TTTTCTTGGAATAGCCCATTGATGTATGCGATTTTTATAAACTTCTTATC
TACAAAAgttggaaaattgttcatacagtatgtggcccccaaaacggcga
tcaaatttaaaatttctctcaaatctagaggaaaaaaggttttacaaaga
tttttgctgcatgaaaaactNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNATCTTTTTTCTTATATTCTTTTTCAGAGAAATATGAGAAGT
GTATCAATTGGAGGTGCAGGACTAATTGTTGGAACAGCCTTATCAGTCAT
TATTCCAGAGGGTGTTCACGCTATGTATGATTCAGGTATTAGCCAATCTT
TCcaaacttttttctcaaaaaaaggttaGCTTGTCATACAAAATTAACAA
AGgccaatgattttttttccctTTTGGTTGAATGAGTATTTTCTAAAGAT
TTCAGACTCAAGATGGGGTCGACCCAACAACCGTTCTTAACTTCAGTTGA
ACTAGAATCTGTGAAGAAGTTAAGCCCAGTTTAATGCACATGCTCAACTA
TTTGTAAATATAGAACGGTATTAGATATCCAAGATTTTGAATTCTCTCTA
ATAGTCCTACCACACAATCATGGCCACGGTCACGAATCACATGCACACGG
GCATGCGCACACTCATCAGAAGAGGTCGTTACAACAAACAAACGAACAAA
AACAACTCATCATTGATAACAATTCACCAAGTGGCGCTTGGGAGAATTTC
AATTCACGGTTACCAGGGCTACCAGAGGTGGAACTTCATTCTATGATTGG
CATTTCATTGAGTTTAGGGTTCATTTTCATGCTACTGGTTGATCAGCTGT
TTGGTGGTGGCCATTCACATGGTGGCTCTGGTGAGTTTTTAAGGGCCATA
TTCTCTATGAACCAGCCAGGttcagaaaattttatttgccttcatttttg
gatatttttagtGACAAATtcagaatatcaaaatttcagGTCCTAAAAAT
TGCTTAAAAGTGGCTTAGGGCCTTTTCCAGGCCTTTTTCCCCTAAGTGTG
AAAGTCAGACTTTTTTATTATTACTTTAATTATTTCGAGTTGCAATAAGG
TCACATTGGTTACTTTGAATTCATTTAGTACTTTtaggaaagtgtaaaaa
atgtTAACCTTGATATCACTTTCCATAGTGGTGGCGTAGTTATGGCTCAG
TTTTAAATGTAGTAGTTTAGTTTTGtgacttttttatattataaatattt
caattgaTTTCTCTACttacaaaatgtttttaaaataaaaaagaattctc
AAGATGAGACGTTGTCTGTCTTAAAAAACACTTCAACTGAACTTTCAATT
TCGAAATATCGTCACTGTCATATTTCCAAATTGAAAGTTTGGAGTGTAAC
GTCTCAGATTGAGAATTCATTTTCATCTTAGTAAGAgattaaaacaaaac
aatgaaTTTAGTATGCTCCGTACAACAcagcctttttttctttttttcag
acgGTGGCAACAGGAAGTCAGCCACTGCAACTTTGGGGCTCTTGGTACAT
GCTGCTGGTATAACCTCACTCACTGGACTATTTACtaagttttttttgtt
aattccAAATTACCATTTGGAAAGTATCTGACCATAGTTTTGTCCGGTCT
CCTCCTGTGTTTAGTTACGTTTCCACCATTATGAAAACAATCGTTCGAAT
CTGTAAAGGCAATCCTTCacgcaaatcgaatgtttgcttccataaACGGT
GGAAGTTATTTTACCAAACACGAAAAACTTATGTAGAGTTTTTCgaactt
tttagaattttaagaTCTGTTAACCAGGCCTTGATAAAACACAATCCTTT
GGTAATTcatttatgttttcttttttacagcTGATGGTATAGCACTGGGA
GCGGCAGCTTCGACGACAAGATCAGATATCGAAATGATTGTTTTCTTTGC
CATTATGTTACATAAAGTATATATAATTTAAATTATTCTGAATGTCATTG
CGTGTCAAAATATCAATAGAgaatgttttatataagatttcTGTGTTGGG
CTAAGATATAGTCGAACGTGAGCAACACACTGGCTTCAATTTCAAGTGTG
CCAAATTACAGCCAAATCCGAACATTTTTAAAGTCTTAAGGCTGCTCCAA
AgatttagcctcgttttggcgaaaatctTGCCTTCAGGCcccaaaaatag
aaattttctaaAAGTGAATAACGCCCTCAGATAatttacccaaggaacaa
gtgtgccaactTTCAACCAAATtaccaaccatttttgaagtctccaggct
gccccaaagtttttagcGGACACAAAGACACATATtttcagattctagct
caactaaaAATGATGTAATCATCACCATTATGTAAGAAAACATTCAATTT
GCATGCGGAATTGATTCTTCAAATTCACGTTTACTTCCATAATAAGTTAC
ATTATTTTGTCCAAAGACAAGCGCCAGTGTCTCTTTGGGAACAGTAAACG
TTTCGAGGGATGAAGGGAAATCAGGCaattgaattttttcattttaaagt
gtTTGTAAACTCGTTTAGAAACAGACAAACTAGATATACACATGATACCA
TTTTTTCCGAACTTTATTTTCAGGCGCCGGCTGCTTTTGGATtgtcttct
tttcttcttcatgaGGTAAATGATCAAACAATCGAtaaatagtaggggga
aatttgtaaaatcgcttgaTTTTTTAGctaaagcacttgttatacatttt
tggaaagctaaggggtaggggagtCAACATAACTTGGGTTATAAATATGA
CAGTCTAAGGCAAAAATTATGGGatgggctggagtttttacaagagactt
cactaattggttatttgaagtaatagagatgacgcgttctttagaaaaag
taacaaaattgttttattacaggttaacgaccaaccaaatcaaacgagag
cttgtaaaaactccagcttgtcccaaaattatagggtcaaaaattaatga
aaattttagcttgagataATACCCCCtacccttagctttccaaaaatgta
taacaagtgctttgactaaaaaaatcgagtgacctcaaaaaaattttccc
ctacAAAAATACGGAccaatttgattttattgaccAAATCATGttccttt
aaaatctttttttgaatttatctttgttgttttgaaataatattAGGCTA
AAATCTTCAATTGTATTGTTTTGGAAAGTATTTTATGGGACATCCAGTAC
TTTATAGTAATATCATATCGTCCATTTATCAATTAAATGTTTAATTGAGT
GTGTTAAGTGTTGATTTTATAACTAACCATCAAATACCCATCGacattaa
ttttcttttgtatAGAATATGGAACGTAACCGGATACGAAAAcatttatt
ggcattttcactGGCAGCGCCTATATTTTCTATGCTGACGTACTATGGTT
TAAGTGCAGTAAGTCTATCACTTTGGACCTTATCAGGATACGCCATTGAT
AGTGTAACGGTGTCGTTGGTTCTGAATGTTTCTATGTTTGTGAAAGTACT
CGCGTCCTTCACACATTTCATTTATGCTTCGTTCAAAAACTATTGATTTA
GTTTGGAGATTTGTGCATCAATTCAAACTAATATAATGGCTTCGTTAACT
TTCAGAGGAGTGTAGTGAACATCTTTGCATCgtaatacagtagagtctct
agAACTCGAACAGAttttattcgaaaattttcATGGTGTCAACGAAttcg
ttcgagttatggagaatcTACTGCATTTCATTTTCACTAATCTTTTCTGT
TTGTAAAACAATTCTTAAGGTTTTTCATGAGtacttaagggaactaattt
tcatgagataaaacaaattttgcaaGAACTTAAGATTTCGGCAAGTAATT
TAGAACTAGAACTTATCTTGGCGATTcagtaattatttttattttggcaa
gaacttattttgTTGAAGGCAGCAAGTAATTTAATTTTGGCCAGAGTTTT
AGAATCTTCCACAATCTCTCGCTAAAATTAgatatttatttacttttact
tGTCCATAATCTCAGACGTTCAGAATGCAAACTAGTTTGAGATAATAGTA
AGAGGAataaaattaaactaaaaagtatttatttgttatttgtttctttc
ttttcttcataGAGTGGTAAACAAACATTTACATCATATAACGGTACAGG
ACTTGCCATGTTGTTTTCTGCTGGTACTTTTCTATACGTTGCCACCGTTC
ATATATTACCTGAACTTTTATCGCAACCTTCCAATTCATTAGATAACTCA
TCACAGACTCATGGGAAATTAACGCGCAAAGAATTATGTTATTTGGTTAT
AGGTATTTTTACACCTGTCATACTGGGTCTTTATCATAAACATTGAAATA
CTCTCAATGTCTAACttttatt

Coding sequence (CDS) from alignment at sc0000128:322257..337678+

>TCONS_00011459 ID=TCONS_00011459|Name=TCONS_00011459|organism=Clytia hemisphaerica|type=CDS|length=8952bp|location=Sequence derived from alignment at sc0000128:322257..337678+ (Clytia hemisphaerica)
ATGGTAaaaacttggtattttttcagcaaaatgCGGCAAAATTGCACTAC
CacgtcttcaaaaataaatctaccaTCTTTGTTATGTCTCGCTTATTGTT
TACTTTTGAGCTCGTTTACATTGAAATTTCCGGGTCAGcgaagcaaaaac
atttttaggctcgtGTGTGGTGGTGGAGCAAGACCCACAAACACATTTGA
CATGAAGCTGTTGTGGAGCGGAGCCAGCAAGAGAAATATGAGAAGTGTAT
CAATTGGAGGTGCAGGACTAATTGTTGGAACAGCCTTATCAGTCATTATT
CCAGAGGGTGTTCACGCTATGTATGATTCAGTCCTACCACACAATCATGG
CCACGGTCACGAATCACATGCACACGGGCATGCGCACACTCATCAGAAGA
GGTCGTTACAACAAACAAACGAACAAAAACAACTCATCATTGATAACAAT
TCACCAAGTGGCGCTTGGGAGAATTTCAATTCACGGTTACCAGGGCTACC
AGAGGTGGAACTTCATTCTATGATTGGCATTTCATTGAGTTTAGGGTTCA
TTTTCATGCTACTGGTTGATCAGCTGTTTGGTGGTGGCCATTCACATGGT
GGCTCTGacgGTGGCAACAGGAAGTCAGCCACTGCAACTTTGGGGCTCTT
GGTACATGCTGCTGcTGATGGTATAGCACTGGGAGCGGCAGCTTCGACGA
CAAGATCAGATATCGAAATGATTGTTTTCTTTGCCATTATGTTACATAAA
GCGCCGGCTGCTTTTGGATtgtcttcttttcttcttcatgaGAATATGGA
ACGTAACCGGATACGAAAAcatttattggcattttcactGGCAGCGCCTA
TATTTTCTATGCTGACGTACTATGGTTTAAGTGCAAGTGGTAAACAAACA
TTTACATCATATAACGGTACAGGACTTGCCATGTTGTTTTCTGCTGGTAC
TTTTCTATACGTTGCCACCGTTCATATATTACCTGAACTTTTATCGCAAC
CTTCCAATTCATTAGATAACTCATCACAGACTCATGGGAAATTAACGCGC
AAAGAATTATGTTATTTGGTTATAGGTATTTTTACACCTGTCATACTGGG
TCTTTATCATAAACATTGAATGGTAaaaacttggtattttttcagcaaaa
tgCGGCAAAATTGCACTACCacgtcttcaaaaataaatctaccaTCTTTG
TTATGTCTCGCTTATTGTTTACTTTTGAGCTCGTTTACATTGAAATTTCC
GGGTCAGcgaagcaaaaacatttttaggctcgtGTGTGGTGGTGGAGCAA
GACCCACAAACACATTTGACATGAAGCTGTTGTGGAGCGGAGCCAGCAAG
AGAAATATGAGAAGTGTATCAATTGGAGGTGCAGGACTAATTGTTGGAAC
AGCCTTATCAGTCATTATTCCAGAGGGTGTTCACGCTATGTATGATTCAG
TCCTACCACACAATCATGGCCACGGTCACGAATCACATGCACACGGGCAT
GCGCACACTCATCAGAAGAGGTCGTTACAACAAACAAACGAACAAAAACA
ACTCATCATTGATAACAATTCACCAAGTGGCGCTTGGGAGAATTTCAATT
CACGGTTACCAGGGCTACCAGAGGTGGAACTTCATTCTATGATTGGCATT
TCATTGAGTTTAGGGTTCATTTTCATGCTACTGGTTGATCAGCTGTTTGG
TGGTGGCCATTCACATGGTGGCTCTGacgGTGGCAACAGGAAGTCAGCCA
CTGCAACTTTGGGGCTCTTGGTACATGCTGCTGcTGATGGTATAGCACTG
GGAGCGGCAGCTTCGACGACAAGATCAGATATCGAAATGATTGTTTTCTT
TGCCATTATGTTACATAAAGCGCCGGCTGCTTTTGGATtgtcttcttttc
ttcttcatgaGAATATGGAACGTAACCGGATACGAAAAcatttattggca
ttttcactGGCAGCGCCTATATTTTCTATGCTGACGTACTATGGTTTAAG
TGCAAGTGGTAAACAAACATTTACATCATATAACGGTACAGGACTTGCCA
TGTTGTTTTCTGCTGGTACTTTTCTATACGTTGCCACCGTTCATATATTA
CCTGAACTTTTATCGCAACCTTCCAATTCATTAGATAACTCATCACAGAC
TCATGGGAAATTAACGCGCAAAGAATTATGTTATTTGGTTATAGGTATTT
TTACACCTGTCATACTGGGTCTTTATCATAAACATTGAATGGTAaaaact
tggtattttttcagcaaaatgCGGCAAAATTGCACTACCacgtcttcaaa
aataaatctaccaTCTTTGTTATGTCTCGCTTATTGTTTACTTTTGAGCT
CGTTTACATTGAAATTTCCGGGTCAGcgaagcaaaaacatttttaggctc
gtGTGTGGTGGTGGAGCAAGACCCACAAACACATTTGACATGAAGCTGTT
GTGGAGCGGAGCCAGCAAGAGAAATATGAGAAGTGTATCAATTGGAGGTG
CAGGACTAATTGTTGGAACAGCCTTATCAGTCATTATTCCAGAGGGTGTT
CACGCTATGTATGATTCAGTCCTACCACACAATCATGGCCACGGTCACGA
ATCACATGCACACGGGCATGCGCACACTCATCAGAAGAGGTCGTTACAAC
AAACAAACGAACAAAAACAACTCATCATTGATAACAATTCACCAAGTGGC
GCTTGGGAGAATTTCAATTCACGGTTACCAGGGCTACCAGAGGTGGAACT
TCATTCTATGATTGGCATTTCATTGAGTTTAGGGTTCATTTTCATGCTAC
TGGTTGATCAGCTGTTTGGTGGTGGCCATTCACATGGTGGCTCTGacgGT
GGCAACAGGAAGTCAGCCACTGCAACTTTGGGGCTCTTGGTACATGCTGC
TGcTGATGGTATAGCACTGGGAGCGGCAGCTTCGACGACAAGATCAGATA
TCGAAATGATTGTTTTCTTTGCCATTATGTTACATAAAGCGCCGGCTGCT
TTTGGATtgtcttcttttcttcttcatgaGAATATGGAACGTAACCGGAT
ACGAAAAcatttattggcattttcactGGCAGCGCCTATATTTTCTATGC
TGACGTACTATGGTTTAAGTGCAAGTGGTAAACAAACATTTACATCATAT
AACGGTACAGGACTTGCCATGTTGTTTTCTGCTGGTACTTTTCTATACGT
TGCCACCGTTCATATATTACCTGAACTTTTATCGCAACCTTCCAATTCAT
TAGATAACTCATCACAGACTCATGGGAAATTAACGCGCAAAGAATTATGT
TATTTGGTTATAGGTATTTTTACACCTGTCATACTGGGTCTTTATCATAA
ACATTGAATGGTAaaaacttggtattttttcagcaaaatgCGGCAAAATT
GCACTACCacgtcttcaaaaataaatctaccaTCTTTGTTATGTCTCGCT
TATTGTTTACTTTTGAGCTCGTTTACATTGAAATTTCCGGGTCAGcgaag
caaaaacatttttaggctcgtGTGTGGTGGTGGAGCAAGACCCACAAACA
CATTTGACATGAAGCTGTTGTGGAGCGGAGCCAGCAAGAGAAATATGAGA
AGTGTATCAATTGGAGGTGCAGGACTAATTGTTGGAACAGCCTTATCAGT
CATTATTCCAGAGGGTGTTCACGCTATGTATGATTCAGTCCTACCACACA
ATCATGGCCACGGTCACGAATCACATGCACACGGGCATGCGCACACTCAT
CAGAAGAGGTCGTTACAACAAACAAACGAACAAAAACAACTCATCATTGA
TAACAATTCACCAAGTGGCGCTTGGGAGAATTTCAATTCACGGTTACCAG
GGCTACCAGAGGTGGAACTTCATTCTATGATTGGCATTTCATTGAGTTTA
GGGTTCATTTTCATGCTACTGGTTGATCAGCTGTTTGGTGGTGGCCATTC
ACATGGTGGCTCTGacgGTGGCAACAGGAAGTCAGCCACTGCAACTTTGG
GGCTCTTGGTACATGCTGCTGcTGATGGTATAGCACTGGGAGCGGCAGCT
TCGACGACAAGATCAGATATCGAAATGATTGTTTTCTTTGCCATTATGTT
ACATAAAGCGCCGGCTGCTTTTGGATtgtcttcttttcttcttcatgaGA
ATATGGAACGTAACCGGATACGAAAAcatttattggcattttcactGGCA
GCGCCTATATTTTCTATGCTGACGTACTATGGTTTAAGTGCAAGTGGTAA
ACAAACATTTACATCATATAACGGTACAGGACTTGCCATGTTGTTTTCTG
CTGGTACTTTTCTATACGTTGCCACCGTTCATATATTACCTGAACTTTTA
TCGCAACCTTCCAATTCATTAGATAACTCATCACAGACTCATGGGAAATT
AACGCGCAAAGAATTATGTTATTTGGTTATAGGTATTTTTACACCTGTCA
TACTGGGTCTTTATCATAAACATTGAATGGTAaaaacttggtattttttc
agcaaaatgCGGCAAAATTGCACTACCacgtcttcaaaaataaatctacc
aTCTTTGTTATGTCTCGCTTATTGTTTACTTTTGAGCTCGTTTACATTGA
AATTTCCGGGTCAGcgaagcaaaaacatttttaggctcgtGTGTGGTGGT
GGAGCAAGACCCACAAACACATTTGACATGAAGCTGTTGTGGAGCGGAGC
CAGCAAGAGAAATATGAGAAGTGTATCAATTGGAGGTGCAGGACTAATTG
TTGGAACAGCCTTATCAGTCATTATTCCAGAGGGTGTTCACGCTATGTAT
GATTCAGTCCTACCACACAATCATGGCCACGGTCACGAATCACATGCACA
CGGGCATGCGCACACTCATCAGAAGAGGTCGTTACAACAAACAAACGAAC
AAAAACAACTCATCATTGATAACAATTCACCAAGTGGCGCTTGGGAGAAT
TTCAATTCACGGTTACCAGGGCTACCAGAGGTGGAACTTCATTCTATGAT
TGGCATTTCATTGAGTTTAGGGTTCATTTTCATGCTACTGGTTGATCAGC
TGTTTGGTGGTGGCCATTCACATGGTGGCTCTGacgGTGGCAACAGGAAG
TCAGCCACTGCAACTTTGGGGCTCTTGGTACATGCTGCTGcTGATGGTAT
AGCACTGGGAGCGGCAGCTTCGACGACAAGATCAGATATCGAAATGATTG
TTTTCTTTGCCATTATGTTACATAAAGCGCCGGCTGCTTTTGGATtgtct
tcttttcttcttcatgaGAATATGGAACGTAACCGGATACGAAAAcattt
attggcattttcactGGCAGCGCCTATATTTTCTATGCTGACGTACTATG
GTTTAAGTGCAAGTGGTAAACAAACATTTACATCATATAACGGTACAGGA
CTTGCCATGTTGTTTTCTGCTGGTACTTTTCTATACGTTGCCACCGTTCA
TATATTACCTGAACTTTTATCGCAACCTTCCAATTCATTAGATAACTCAT
CACAGACTCATGGGAAATTAACGCGCAAAGAATTATGTTATTTGGTTATA
GGTATTTTTACACCTGTCATACTGGGTCTTTATCATAAACATTGAATGGT
AaaaacttggtattttttcagcaaaatgCGGCAAAATTGCACTACCacgt
cttcaaaaataaatctaccaTCTTTGTTATGTCTCGCTTATTGTTTACTT
TTGAGCTCGTTTACATTGAAATTTCCGGGTCAGcgaagcaaaaacatttt
taggctcgtGTGTGGTGGTGGAGCAAGACCCACAAACACATTTGACATGA
AGCTGTTGTGGAGCGGAGCCAGCAAGAGAAATATGAGAAGTGTATCAATT
GGAGGTGCAGGACTAATTGTTGGAACAGCCTTATCAGTCATTATTCCAGA
GGGTGTTCACGCTATGTATGATTCAGTCCTACCACACAATCATGGCCACG
GTCACGAATCACATGCACACGGGCATGCGCACACTCATCAGAAGAGGTCG
TTACAACAAACAAACGAACAAAAACAACTCATCATTGATAACAATTCACC
AAGTGGCGCTTGGGAGAATTTCAATTCACGGTTACCAGGGCTACCAGAGG
TGGAACTTCATTCTATGATTGGCATTTCATTGAGTTTAGGGTTCATTTTC
ATGCTACTGGTTGATCAGCTGTTTGGTGGTGGCCATTCACATGGTGGCTC
TGacgGTGGCAACAGGAAGTCAGCCACTGCAACTTTGGGGCTCTTGGTAC
ATGCTGCTGcTGATGGTATAGCACTGGGAGCGGCAGCTTCGACGACAAGA
TCAGATATCGAAATGATTGTTTTCTTTGCCATTATGTTACATAAAGCGCC
GGCTGCTTTTGGATtgtcttcttttcttcttcatgaGAATATGGAACGTA
ACCGGATACGAAAAcatttattggcattttcactGGCAGCGCCTATATTT
TCTATGCTGACGTACTATGGTTTAAGTGCAAGTGGTAAACAAACATTTAC
ATCATATAACGGTACAGGACTTGCCATGTTGTTTTCTGCTGGTACTTTTC
TATACGTTGCCACCGTTCATATATTACCTGAACTTTTATCGCAACCTTCC
AATTCATTAGATAACTCATCACAGACTCATGGGAAATTAACGCGCAAAGA
ATTATGTTATTTGGTTATAGGTATTTTTACACCTGTCATACTGGGTCTTT
ATCATAAACATTGAATGGTAaaaacttggtattttttcagcaaaatgCGG
CAAAATTGCACTACCacgtcttcaaaaataaatctaccaTCTTTGTTATG
TCTCGCTTATTGTTTACTTTTGAGCTCGTTTACATTGAAATTTCCGGGTC
AGcgaagcaaaaacatttttaggctcgtGTGTGGTGGTGGAGCAAGACCC
ACAAACACATTTGACATGAAGCTGTTGTGGAGCGGAGCCAGCAAGAGAAA
TATGAGAAGTGTATCAATTGGAGGTGCAGGACTAATTGTTGGAACAGCCT
TATCAGTCATTATTCCAGAGGGTGTTCACGCTATGTATGATTCAGTCCTA
CCACACAATCATGGCCACGGTCACGAATCACATGCACACGGGCATGCGCA
CACTCATCAGAAGAGGTCGTTACAACAAACAAACGAACAAAAACAACTCA
TCATTGATAACAATTCACCAAGTGGCGCTTGGGAGAATTTCAATTCACGG
TTACCAGGGCTACCAGAGGTGGAACTTCATTCTATGATTGGCATTTCATT
GAGTTTAGGGTTCATTTTCATGCTACTGGTTGATCAGCTGTTTGGTGGTG
GCCATTCACATGGTGGCTCTGacgGTGGCAACAGGAAGTCAGCCACTGCA
ACTTTGGGGCTCTTGGTACATGCTGCTGcTGATGGTATAGCACTGGGAGC
GGCAGCTTCGACGACAAGATCAGATATCGAAATGATTGTTTTCTTTGCCA
TTATGTTACATAAAGCGCCGGCTGCTTTTGGATtgtcttcttttcttctt
catgaGAATATGGAACGTAACCGGATACGAAAAcatttattggcattttc
actGGCAGCGCCTATATTTTCTATGCTGACGTACTATGGTTTAAGTGCAA
GTGGTAAACAAACATTTACATCATATAACGGTACAGGACTTGCCATGTTG
TTTTCTGCTGGTACTTTTCTATACGTTGCCACCGTTCATATATTACCTGA
ACTTTTATCGCAACCTTCCAATTCATTAGATAACTCATCACAGACTCATG
GGAAATTAACGCGCAAAGAATTATGTTATTTGGTTATAGGTATTTTTACA
CCTGTCATACTGGGTCTTTATCATAAACATTGAATGGTAaaaacttggta
ttttttcagcaaaatgCGGCAAAATTGCACTACCacgtcttcaaaaataa
atctaccaTCTTTGTTATGTCTCGCTTATTGTTTACTTTTGAGCTCGTTT
ACATTGAAATTTCCGGGTCAGcgaagcaaaaacatttttaggctcgtGTG
TGGTGGTGGAGCAAGACCCACAAACACATTTGACATGAAGCTGTTGTGGA
GCGGAGCCAGCAAGAGAAATATGAGAAGTGTATCAATTGGAGGTGCAGGA
CTAATTGTTGGAACAGCCTTATCAGTCATTATTCCAGAGGGTGTTCACGC
TATGTATGATTCAGTCCTACCACACAATCATGGCCACGGTCACGAATCAC
ATGCACACGGGCATGCGCACACTCATCAGAAGAGGTCGTTACAACAAACA
AACGAACAAAAACAACTCATCATTGATAACAATTCACCAAGTGGCGCTTG
GGAGAATTTCAATTCACGGTTACCAGGGCTACCAGAGGTGGAACTTCATT
CTATGATTGGCATTTCATTGAGTTTAGGGTTCATTTTCATGCTACTGGTT
GATCAGCTGTTTGGTGGTGGCCATTCACATGGTGGCTCTGacgGTGGCAA
CAGGAAGTCAGCCACTGCAACTTTGGGGCTCTTGGTACATGCTGCTGcTG
ATGGTATAGCACTGGGAGCGGCAGCTTCGACGACAAGATCAGATATCGAA
ATGATTGTTTTCTTTGCCATTATGTTACATAAAGCGCCGGCTGCTTTTGG
ATtgtcttcttttcttcttcatgaGAATATGGAACGTAACCGGATACGAA
AAcatttattggcattttcactGGCAGCGCCTATATTTTCTATGCTGACG
TACTATGGTTTAAGTGCAAGTGGTAAACAAACATTTACATCATATAACGG
TACAGGACTTGCCATGTTGTTTTCTGCTGGTACTTTTCTATACGTTGCCA
CCGTTCATATATTACCTGAACTTTTATCGCAACCTTCCAATTCATTAGAT
AACTCATCACAGACTCATGGGAAATTAACGCGCAAAGAATTATGTTATTT
GGTTATAGGTATTTTTACACCTGTCATACTGGGTCTTTATCATAAACATT
GA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006421XLOC_006421Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011459-exon-sc0000128-1491911889:322257..322791TCONS_00011459-exon-sc0000128-1491911889:322257..322791Clytia hemisphaericaexon
TCONS_00011459-exon-sc0000128-1510915933:322257..322791TCONS_00011459-exon-sc0000128-1510915933:322257..322791Clytia hemisphaericaexon
TCONS_00011459-exon-sc0000128-1575043694:322257..322791TCONS_00011459-exon-sc0000128-1575043694:322257..322791Clytia hemisphaericaexon
TCONS_00011459-exon-sc0000128-1491911889:333492..333591TCONS_00011459-exon-sc0000128-1491911889:333492..333591Clytia hemisphaericaexon
TCONS_00011459-exon-sc0000128-1510915933:333492..333591TCONS_00011459-exon-sc0000128-1510915933:333492..333591Clytia hemisphaericaexon
TCONS_00011459-exon-sc0000128-1575043694:333492..333591TCONS_00011459-exon-sc0000128-1575043694:333492..333591Clytia hemisphaericaexon
TCONS_00011459-exon-sc0000128-1491911889:333861..334136TCONS_00011459-exon-sc0000128-1491911889:333861..334136Clytia hemisphaericaexon
TCONS_00011459-exon-sc0000128-1510915933:333861..334136TCONS_00011459-exon-sc0000128-1510915933:333861..334136Clytia hemisphaericaexon
TCONS_00011459-exon-sc0000128-1575043694:333861..334136TCONS_00011459-exon-sc0000128-1575043694:333861..334136Clytia hemisphaericaexon
TCONS_00011459-exon-sc0000128-1491911889:334757..334813TCONS_00011459-exon-sc0000128-1491911889:334757..334813Clytia hemisphaericaexon
TCONS_00011459-exon-sc0000128-1510915933:334757..334813TCONS_00011459-exon-sc0000128-1510915933:334757..334813Clytia hemisphaericaexon
TCONS_00011459-exon-sc0000128-1575043694:334757..334813TCONS_00011459-exon-sc0000128-1575043694:334757..334813Clytia hemisphaericaexon
TCONS_00011459-exon-sc0000128-1491911889:335137..335222TCONS_00011459-exon-sc0000128-1491911889:335137..335222Clytia hemisphaericaexon
TCONS_00011459-exon-sc0000128-1510915933:335137..335222TCONS_00011459-exon-sc0000128-1510915933:335137..335222Clytia hemisphaericaexon
TCONS_00011459-exon-sc0000128-1575043694:335137..335222TCONS_00011459-exon-sc0000128-1575043694:335137..335222Clytia hemisphaericaexon
TCONS_00011459-exon-sc0000128-1491911889:335880..335921TCONS_00011459-exon-sc0000128-1491911889:335880..335921Clytia hemisphaericaexon
TCONS_00011459-exon-sc0000128-1510915933:335880..335921TCONS_00011459-exon-sc0000128-1510915933:335880..335921Clytia hemisphaericaexon
TCONS_00011459-exon-sc0000128-1575043694:335880..335921TCONS_00011459-exon-sc0000128-1575043694:335880..335921Clytia hemisphaericaexon
TCONS_00011459-exon-sc0000128-1491911889:336622..336714TCONS_00011459-exon-sc0000128-1491911889:336622..336714Clytia hemisphaericaexon
TCONS_00011459-exon-sc0000128-1510915933:336622..336714TCONS_00011459-exon-sc0000128-1510915933:336622..336714Clytia hemisphaericaexon
TCONS_00011459-exon-sc0000128-1575043694:336622..336714TCONS_00011459-exon-sc0000128-1575043694:336622..336714Clytia hemisphaericaexon
TCONS_00011459-exon-sc0000128-1491911889:337419..337678TCONS_00011459-exon-sc0000128-1491911889:337419..337678Clytia hemisphaericaexon
TCONS_00011459-exon-sc0000128-1510915933:337419..337678TCONS_00011459-exon-sc0000128-1510915933:337419..337678Clytia hemisphaericaexon
TCONS_00011459-exon-sc0000128-1575043694:337419..337678TCONS_00011459-exon-sc0000128-1575043694:337419..337678Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011459-proteinTCONS_00011459-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000128supercontigsc0000128:322257..337678 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
17.1178	19.4137	6.83559	6.99399	22.2034	19.189	25.2235	29.9539	15.695	20.1624	12.1295	11.171	10.4473	10.5201	12.225	14.0108	17.4814	15.7851	6.84804	10.1727	11.6889	12.0442	24.5265	24.0377	10.5165	13.5291	9.14842	7.03563	18.4793	20.2401
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR003689ZIP
Vocabulary: Biological Process
TermDefinition
GO:0030001metal ion transport
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0046873metal ion transmembrane transporter activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030001 metal ion transport
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016020 membrane
molecular_function GO:0046873 metal ion transmembrane transporter activity
Blast
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BLAST of TCONS_00011459 vs. Swiss-Prot (Human)
Match: S39A9 (Zinc transporter ZIP9 OS=Homo sapiens GN=SLC39A9 PE=1 SV=2)

HSP 1 Score: 229.95 bits (585), Expect = 1.405e-70
Identity = 142/302 (47.02%), Postives = 193/302 (63.91%), Query Frame = 2 
Query:  530 SKRNMRSVSIGGAGLIVGTALSVIIPEGVHAMYDSVLPXXXXXXXXXXXXXXXXXXQKRSLQQTNEQKQLIIDNNSP--SGAWENFNSRLPGLPEVELHSMIGISLSLGFIFMLLVDQLFXXXXXXXXXXXXNRKS---ATATLGLLVHXXXXXXXXXXXXSTTRSDIEMIVFFAIMLHKAPAAFGLSSFLLHENMERNRIRKHLLAFSLAAPIFSMLTYYGLSASGKQTFTSYNGTGLAMLFSAGTFLYVATVHILPELLSQPSNSLDNSSQTHGKLTRKELCYLVIGIFTPVILGLYHKH 1420
            S+  ++ V++ GAGL+ GTAL+VI+PEGVHA+Y+ +L                    +    Q +E   +I  + +   S   E+ +S        +LH+ IG+SL LGF+FMLLVDQ+              R S    T TLGL+VHAAADG+ALGAAAST+++ +++IVF AIMLHKAPAAFGL SFL+H  +ERNRIRKHLL F+LAAP+ SM+TY GLS S K+  +  N TG+AMLFSAGTFLYVATVH+LPE+     +   +++   G L+R E+  LV+G   P+IL + H+H
Sbjct:   31 SEERLKLVTVLGAGLLCGTALAVIVPEGVHALYEDIL--------------------EGKHHQASETHNVIASDKAAEKSVVHEHEHSH----DHTQLHAYIGVSLVLGFVFMLLVDQIGNSHVHSTDDPEAARSSNSKITTTLGLVVHAAADGVALGAAASTSQTSVQLIVFVAIMLHKAPAAFGLVSFLMHAGLERNRIRKHLLVFALAAPVMSMVTYLGLSKSSKEALSEVNATGVAMLFSAGTFLYVATVHVLPEVGGIGHSHKPDATGGRG-LSRLEVAALVLGCLIPLILSVGHQH 307
The following BLAST results are available for this feature:
BLAST of TCONS_00011459 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
S39A91.405e-7047.02Zinc transporter ZIP9 OS=Homo sapiens GN=SLC39A9 P... [more]
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