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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00011466 ID=TCONS_00011466|Name=TCONS_00011466|organism=Clytia hemisphaerica|type=transcript|length=243bp
GGTATGGACAAAACGATCAATTCACAGAGCAGTACCACAAGCGATACAGC
AACAGCTATGAATACCATGTTGTTTGTGCAAGGACAAGAATTCGCTGTTG
TTGGGACATtgttaattttgatgaagatcaTTGCGGAATATTGTCAATGC
ATTGATGACGTACCAATGTTGGTCACTGACGTCATGACACGTTTGTGCGA
ATTACTCAAAatattcaatTCGCGCGCATGTCAGTTAGTGTTG Run BLAST on NCBI transcript from alignment at sc0000128:4548..21982- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00011466 ID=TCONS_00011466|Name=TCONS_00011466|organism=Clytia hemisphaerica|type=transcript|length=17435bp|location=Sequence derived from alignment at sc0000128:4548..21982- (Clytia hemisphaerica)
GGTATGGACAAAACGATCAATTCACAGAGCAGTACCACAAGCGATACAGC
AACAGCTATGAATACCATGTTGTTTGTGCAAGGACAAGAATTCGCTGTTG
TTGGGTAAGTTGTCTACTTGAGTGTTTTTAACGGACGGAGATCAACAATA
TTATAGATTTAATCACAGTCCATTCTCAACTCAAAGGCAATTTTTATGAG
TGACCCAATTGATTAATTTTGTTGTTTTGATCTCAGCAACTTTTATTAGC
CATTCTATTCCGGCTTACGCTTAAACAGTTTAAAGTTTTCATATTTGACA
GATTTTTTGATGTGAAAATGGTAGCTGAAATTTATAATGACAACAGGGGA
ATGTAAATCAAATAGTAGAATTCATATTGTGTGGGTGGCTCACTTTTTTG
TCGAAATTTGAAAATGAGCAAAGGATATTTTGTGAGGTTAAGTACCGTGG
ATTATTCACGAACACGAACGGGAAATATTAAAGGCTTTTTTAAATTCAAA
AATTGATTGGTTGAACTACACTAGTGTCTTTCATGTTCCATTCGCGCATG
AATTATCTACGGTACTAAACCTCACTAATGGTATGCGAGATACGAGCGGG
ATTTTTGGAAAAGCCTTTTAAATTTATATTTTAGCGATTGGTTTATGGGG
TTTAAGGAAGCTATCAATGGCTAGATTTAAGCATTGATTGGCTGGTAGAT
TTATATTATTGCTTATTTATTTAACGAACAGCTTTAGTAGTCGAAGGTTA
AAACAAATCAATTTGAAAACAAATTCTGATGTTGTTAAATGCGGTTGTGC
GCAGGGCAGATAGACGTGAACGGATCTTATTTATCACTCTCTTATATTAT
GTTTTAGGACATTGTTAATTTTGATGAAGATCATTGCGGAATATTGTCAA
TGCATTGATGACGTACCAATGTTGGTCACTGACGTCATGACACGTTTGTG
CGAATTACTCAAAGTAGGTCTATTTCTCCTTCATAGCTATGCTAATTTAA
CGAGCAGTACAATTCTTATGTTTATCTCAGATCAAGACTTCAAAATCAAA
AATTTAAGACTTTAAAAGATTTAGAAAACACGAATTACATGTGTTGCCAG
TCGACTTGTGCATCAATGCCGAAAACGGCGTTGGTCAGCTTTTTGGCACG
AAAAGTGATGAAATACAGCATTTGTCTGGGAAATTAAACAGTGTTGTATT
TTTTTTTAATTTGATTATGTTATATATCCAAGCAGTGACTTACGGGATTA
GTAGTTTTATGAATCGGCTTAGGCATTAGCTATATAGTTGATTTCTACTT
GCAAAGCTTTCGCTACCACAAAGCAAGGCAGTCCAAGATCTCACTCGTCA
AAATTCTGTTGATGTTCTCCGATTCGATTTTCAAGGGGAATTGGATCTTC
ATCGAAGAAGGGAGCCTATTTAGGAGAATTTCTTGTTGATGGCAACTTTT
AATATTATCGAATAACGGAGCGTATTGTGTCAAGTGTCAACTGTAAGTTT
TTACAACAAAACTGCAGGATGTGGTCCTTATTATTCAATTCACTCATTTC
GCCTTCTCTTTTTTTTAGATATTCAATTCGCGCGCATGTCAGTTAGTGTT
GGGCGCAGGCGCCTTACAGACAGTTGGCTTGAAGACCATCACGGCGAAAC
ACTTGATGCTCGTTGCGCAATGTTTACAAGTTGTGATACTAAACATCAAT
ACAATCAAAAATCACTTCGAATTGAGGCTGACACCCAAACAATACGTCAT
GTTAACGCAATTTGATCAAATATTAAAGGTATTTTTAAACTTCAGTTGCT
AGCTAGAGTGTGAAAATGGTTGTTAGTCTGCCTGTCTGTTTATATGTGTC
CCTCTTCAACTTTTAACTTCAAATTAAATATTTAGGGACTGAGACGAAAT
TTTTTTCCACAAGATTTCAAGTGTCGGATATCTTGAAAAATATATTTTTT
TAATTAAGATTGTTTAAAAAAAAGAAGTTTAATACAAGAATTATATAGTC
AAAAGGATAATCTGATGGCTTAAGTAAAGATCTTCGGCATGAAAGTCCGA
AGTTTTTTGTCCTGGGCGAAACCTCAAAAAACGATTTCTTAAGTTTATAT
AGCAAAGGTAAAATTTATTTGAAGAAATAGCAAGGTAAGCTAGACAGAGA
TTTCAGTAGGTTAAGGATCTCAAATTACCCTCAGATCATCCCTCAAGTTT
TATGTTATCTTATATTGAATCATCAAAATAAAAAATAACCCGTTTTTAAG
AACTGAAGAAAACAATATGTGAACCTTAGATAAATCCTCCAATCTTTGGA
TTTTATTGTCCATTTTAAAAGTAGTCACAGCCAATTTTACATTCGTCGAC
GGTTGGAAAGGTTGAGCAACCTTCTCTTGAGCATGCGACGCACAAATTGA
ATGTGTACCCCTCGACCTTCGGAAAGCAGCCAGATTGCCCGTTGCGCTCA
CATTTCGTTCGGCAGCTACCGACAGTGACTCCAAGGTGTCGCATTTTACA
CGCATGCGTACACGAAAACATTTGATTACATCCTTTTTGAAGGCTTGTAT
CTGATGCGCATGCGAATTCACTGCACGCATTTAAACATCCTGCCAAACGT
TTATCTACAAGTGAAATGCAAACATTATGTAATGGTTCGAATGAGATGCA
AATGGATCCTTATTATTCATTAAGCAATCGAATTTTAATTAGTTCTATTA
ATCAAAGAATCAAAAAGGTAAAATATAGTTTACACAAATAATAATAATAG
GTTCGGGTTAACCCAGATATCGGGAATTATCGTTTGGCGATAGTTTAAAT
CTCAAAAATAGATCTTCACTTGAGTTTTAATGCGGTAAATTGTGCCTTTA
AATACTTTCAAAGTCAGGTAATTATAGACCTTATCTATTTAGAACCAAAT
AAGAGACTCTTCTTTTGACAGCTGAAAATATTTTCAAATTTTGATAAACG
GGAGGGGACTTATTACCTGGGGGTTGGAAATTGTACTTCAAAATAAGGTA
ATTATAGACTAAAATTTAGCTATTTAGAGCAAAATAAGGGACTTTTCTTT
TGATAGCTGAAAATATAAATAAACGTGAAAGGGGGTCCTTAAATGGTCCG
GGGTGTGGAAGAAATCAAAAAACTAACAAGCGTAGGGCGTTTATTAGGCA
CACGGTAGGATAGGATGTACGTAGCCTTACCTTCTTGTGCTTGAGCACTG
CAGCTGGATGGACAAGCCTTATTCATGAATGAAGGGTTTTTGGTGCATTC
TCCACGTCTTGCCCAATAACTGCATGACCAACGTTTATCACCATGAAAGC
CTGCCATAAAAAGAATGGTATTTATAGAAGTCTGATTTTAAAGCCGTTAA
TTTCCAAGCTACTGCAAACGACTCTCTAAAAGTAAACATACAATTAAAGC
TTTTCAGGGCCAAAGGATTTGTTCTTTTCACATTCATCATGTGATTTTTA
AGGTGTGACAGGAACCTATTGTAACAAACCTAGCTTAAATCAACTGATAT
CAAGCAAGTCTTCTTGACTTAAAAAAGTAACACTTTGTGGGAACGCTCCT
TATACAGTCGAGTCTCCATAACTCGAACACGGGCGGGAAACAGAAATTTG
TTTGAATTAAGGAAATTATTGAGTATTATGGAGTTATGAAGTAAGGCTTA
TAAGGTTAACTGATGGGGCAAGAAAACTTGTTCGAGTTAAGGAGGTTCGA
AGTAAAGAGATTCTACTGCAATAACAACGAGATAATATTAGTAGCGTATG
TACTTACAGACGTCACAGGCAGGAGCACAGCTGACAATCATGTAGGCTGG
GTTTTCATGGCATTCACCTCTTTTGGCCCAACTATCGCAATTATCGTTCG
TGTTCTTGCAGTTTATGTCGTTGCTGATGACCGCTCCACGTGCACTGTGA
ACTGTAAACAAAATGTCAAGATTCAAAGTTAAAATCTTTCCATCCCGGTG
CTACTTAAATGTGATTTTTATTTCGTTACGCTTAAGATTAACTTAATCTT
TCCCTCTATACCGGAGAAATTCACATCATCCCAAATTGATGCACGGGTTT
AAAGTTTGAACCATCTTTTGTATTCAAATGTCGAGAAAAAGTAAAATGTT
ACCTGCTACTACAGCAATGCAAATGAGTGTTGTCAATCCCTTCATTTTGT
TTTGTGTGTGTTTTGTGTGTTTTTCTTCTTGTCAAGTCAATGGCTTCTTT
TGCTTTGAATGATTTCTCAGTGGTCCTTGTCCTTATTTATAGTCTTTTCT
ACAGACCATTTTCTTCCTTTTTCGCCTATTCTTTCTTTTCGAAACTGAGA
GGATGATTTTTTAATTTGCGTAATTTTATAGCTACTAATATTTCATTTTT
TTAATTACAGGAAACTCATTAAAACGAATTCATAACTATATCGTATCGTA
TTTTCGAATAGGTAATCTTAGACCACGGTCACATTCGCTCCGAAACGAAT
GAAGTCATTCCATTGGTTAAACTCAAGTTTTACGTCACTTCTAACCAATG
GAATGACTTAATTTCGTTTCGGAGCGAAACGGAACCGTAGTGTAGAAACG
TGGTCTTGTACTATAACTTATTTTATGGAAGCCCTAAGTATGCCGTCCAA
CCTAGAGTTCTTTCTTGTAAGATTTACAGATCGAGATCAAAAGTCCCTTG
AGCTGTTTTTAAAGATTTTAAGAACAATAAATCTTTCCTGTCTAGAAATA
TTCCAATGTTCTGGTGATAAAGTTCTTTTTTTTTTTTTTTTTTTTTTGCA
ATACATTAAAATAGTAAGATGCAATAACGATTACTTAGGACCTGAATACA
CAGGTTGCAAAAGTCTGAAGACAAATCACGCTTTTTACTAGAAATTTTTA
TGTGCTTGTTGTTATGTTACATGAGATTTATTTTTGATTGATTCGAATGT
ATTGCCACTAAAAAAGTTATCAGCTGTTGAGTTGTAAAGCAAGTAACATG
GAAATAGAATCGGGTGAACTTTTTCGAGTAATCACATGTTTTGATTGCAT
TGATATAATTTTGCAATCTGTGTATTCTCACTTAACGTATCCGATCATGA
CAAGTGGCAGAGCTTGATAAAAAAATGTACAGTATTAGACTAGATAGACA
CCTGACATTGCAAGCTCTTTACAAGTACAATACTATGGTTGAAAAATAGA
AGCTCAAAGTCAGGTCTTAGTCAAAAAAGCCATAATTTCACCTTTATATG
GTAATGTACAATGGACTCTCGGTTAATCAAAGTAAATCGACTTTCCCCGT
TTTATCCTCTTTTTAAGTGGTTTCTTATTCCCGTGGATAAGAGGCTATTT
TCTTCCAGTTATTCGAAGTCTAACAGTTTTATAAGTTATGGGGTATCAAC
TGGTTGAAATCCCCATGATATTCCAAAGACAAAGAGAGAATGAGGCTAAG
ACAGCCAGTTAAGTATTTGATTTGATTTTTATTTGATTTGGAAGGTCGTT
GGACTAAAATCGAACGTGCACAACACACACTGGGCTAGAATTCATCCAAC
TTTATGGAGATTAAATTGGAGTAAAAATTGAAAACTTGTTTCAGGCTACA
AATATTGCATTTTTTGAAAAGTATGGAACGTGTGCAAAAATTTAGCCACT
TCCAACCATTTTCGACTGCTGCTCAAAAGATTTTAGCCTCATTTTGGCGA
AACTTGTACCAAAGTCCCAAAATTTAAATTTTGAAGAAAAAAAACGCTTC
CAGGGGTTTGCTAAAGATAAATTGTACGACAAATCATTTTTTAAGTCTGC
CCAAAGACTTGCTCTAAGTTTATTATACCATTTACATGGAGTTAATCTGA
ACTAGACAAAGATAGTGGTCAATATTGGGCTGATCCATTAAAAAAAAAGG
TAAAATTTCCAAAAAAACCCTTGGAAAAGTTCTTTTCATACTTAAAAGTG
AGGGTGGACGAACTAGAATCAGTCTTTTACCTACTAGAAATTTTAGAATA
ACTTTTTACCCCCTTGGAAAAATGAAAACACACCCCCTTTTCTCAGATTA
TGATATGAAATGTTCGTCCACCCCCTGTATAGATATAAAATGNACTGTGT
TCGAATCGCAAGCTCTTCCAAGCAGGGTCTTAGGGAAATATGGTGATAGA
CTCTCTACCTTCAATCACAATTGACGCTCTCTAATTTAACGTTCAAATAT
TCCATCCCCTCCATTATTCGATAATATTGAAAGTCACCGTCAACAAGAAA
CTCTCATAAACGACGCACTTCTATTTGATACGTTTCCTTATTCAATGAAA
ATTGAATTCCCCTTGAAAATCGAATTAAAGAGCGTCAAATGTACTATGGT
GTCTACGGGACCATGAAAACCTCGAAAAAGAACCATCCAATCTTGAAAAT
TTACTAATAGATGTTGTGGAAGAAAATCCACCTTGAAAATGGAGAAAAAT
ATTCATGGACTTCCTACTACTAGATGCTAAAAGAAGGAATATTTTATATT
TTATATTTTATATAGGATTACAACAATCACAGACACGAACTATTATGTAA
AATAACCAATCTGATGGAGGAAATATTCAATTCGTATTTATCACAGGTAC
TAACCGCTTTTTCTTCGTATTTGTTCAGCTACTCATCGACTACAATCCTG
TAGAACTGCTAAACTTTCAACTCCCGCTTAATCCCCACTCTGTCGCCACA
AACGCCACAAACGAAGGCTAGTTCCGTTGAGGATTTTCAAGCCTTTTTAG
TACCTTACAGTGCATTTCTTTCTTCTTTTTTTTGACCCTAGCATTGTGTT
TCGGAAAAAGACACCCTGTGTGACAACGGTTATTTTCGGTTAGTGTCGGT
TATTTTGCCATGATAACTCTCCCCTGGAAATATCATTTAATTTGCGAATA
TTTTATTGCAGTACGAATTAAAACCACCGATGCCTTCGAAAACCATGCGT
AATATTGTGGCGCAAGTCAAGAAGTTGCGTGAAACAATGGCCGCCATTTT
GTCCGAACAACAACTTGAAGTCCTGTTTCGTGACGTCAGAAGAAAATTTA
AAGACTGTCTTGCGTCGAAGCTAGCGGATTTTGGTGTATCAAATGATGGA
GGGCCTCAGCACGGGTTCGTATATTTTCACTTGTATTTAATGCTTTATCC
ATCGTTTAAGGCCCCCTTTAAGAGCAATATGATTTCAAGTGTATGGTCAT
ACAGTAACCATAAATGCCGAAAATCCCCGGTTGGAAGATGTTTTTAAAAA
AAGGCGTGATTAATCGAGAATGAAGGTCTGTTTCAAGGTCATATTTCCCT
GTTGGAGGAGACAATTTAAAAAAATCTTGAAAATCATATTATGTTTTCTT
TATAGATTGGTTACTTCAGATGTCATTTTTTACTCGACCAGTTTGAATAA
GTTGACGGGTTTCAAAGACTTGGATCATAAATGTGACGGACTTTGGAATT
CAATCAATGAGCTTAAAAAAACTCGCAAAAAACATGAACAACATTCATCG
AAAAGTCAGCAGCGGGCTTCATCAGCAAAAACGAAAAGTAACAGGTGATG
TCAGTAGATCCTTTTTAATGGTTATGTTTTTTTTTGTAAAATACAGAACT
TTTTTTATAATTTTAGACTGTTTCTCGAGTCCCCATTCAGTCCATTCCGT
GACCTCTTTTTTGAGGGCAAACTTTTCAAATCTGTAGCGAGAGAGTAGAT
TTTTATAGGCATACACGCTTTTTTTATAAGAATATCTTATATAAGAATAT
CAGGGTGAAAATTGGCCAAATCGTAAGAATACCCTAAGAATACCCTCTAG
GGTGAGTTTCACAGAATTTGATAAAAATACAGTCATTTTGTATTTGGTTA
ACAGAAAAACTGCTTCCTTTGTTAGACTTGAATTTAAACTTGTGGAGAAA
TGTAATTTTAGCTCAAAATGTTCGTTCAAAAGTTCAAATTGATCATTTCT
CATGTTTGTAAAAAATTCAAGTCTAAAACAGTAAGAATATGTTAAGAATA
TTTCACCCTCAATTTTGCCTATTTCTTAAAAATACTTGACCGTCATCCAA
AGTAAGTAAGTCTGCGACCGCAGTCGGAGGCGACCCGAAGGCTCCTCTTT
CGATAGCTATCTACCCGAAGGTAGGGGNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACCATTTTGGGAATCTTTGG
TATGACCCGGCTGGGGGTTGAACCCACAACCTTGCGAACCGTAGCCGGAT
GCTCTACCACTGTACTACGGTCGCTAAACCAAAAAACACTAACTTATCAG
CCAAAACTTGGCCGGCCCTAAGTGACTAAATTTTGGCTTGGTGACTAAAA
TTAGGGCCGACTAAGTTTTGGCCGATAAGGTATTCTTATTAAAAAAAACG
TGTAATCAGATAGTTTTAGATCTTTTGTCTGCAGCTTCTTTCCGTTGTTC
TGAGCAAAATATTTTTGTGTTATTCTTTTTTTAAATCAAGATATCACAAT
TTGAAATCCCTATAATGAGTTTTAGCGCGGATCTTACTTCAAAATTTCAC
TTTTTCTTGTTAATTGTCAATTGTCAAAAAATTGTAACTTGAATATCTTG
ACTTAAGATAAGAATTATACAAAAAAAATTTGGAGGTTTTGCGCTGGACC
ATGTGAGGAATTTACAAAAAATCTGAAACCCTATACTAGGATTCCCCCGA
CATTTACGTTGCAAAAATAAAACTTGATCTTGGTCCCTTTTCGTCCTGAT
AATTAGGGGTACATTTAAAGAAGTAATAATGGTTTGACCTTTCATAATTT
TTGAACAGCTTAAATTAGGTTTTCAAGATAATATTTTTGGGATTGTAATT
TTAATGAAATTCTTTTATTTAGACTCTTGTCACAGTATTTGTGAACAGAT
TATTTTTGTTTATTTTTGTAAGATATAGGAAAATTTAAAGAAATTAAATT
ATCTACACAAAGTAGACTCTATTACAATTAGCTTAAGGGTATAAATTTTT
GCGGGGATTATATTTTGCAAATTTTCGCGAATTTCGTCTTTTTCGCGAAA
ATTTTCAAACTCTTATCTCTCGCTAAATTCGCGAAATTTAATCTTTGCGA
AAATTAAGTTTTTTACACTGAAAATTCTTTCAGCTAAGAAACTCTCTTAA
ACCGAGTCTCCTTTACTCGAATGTTTCTGTAATTTGAATAAATTTTCATT
CCTCGTAGCCGTCGAGGGTTGTCATTTAAAAAAAAATTTAAATTAATTGA
TTTAGTTCACATTGTAACATTTTCTTTAGAAATTCCCAACACTTCACACT
CTGTACAACTAAATTTTGACAGTTAGAAAATCAAACAGAGTGTTACCAGA
TAAAAACTTAAAATATCACAAGAATAAAATATGAACTAAAAACTAGCCAT
TGCTTTCACGGCAGGTACGAAATGCATAAAACATAATGCATATTGCATAA
TGCATAATAGTATTGTGTAATTTACAGAACGATTTTATATTTTCTAAAAC
TCTCCTTTGTAGAGGCTAAACCGCGAAAACCTCTTTAGAAGAGTTTCTTG
TAAACATTCCAATCAGAGGAATTTCCCCAGACATAATATTTACTTTTCGA
ATCCGACGAAAGAGAAAACATTCGAATCATAATAACAAAGGTTTTTCCGT
CAGCATAAATAATAAGAATCAGATCAGAAAGGTTTCCCCCTTCTTCTGTC
TCAAAAAAACATAAACATTCGAATGTAAAAAAATTCGAAGCCTATTTTCT
TTGATCTAGCTTCCGGATAGTCAGAAAATCTGCCGTATACTATCTTCGCT
TTCTGATTTGAATGATGGCGCTACTTTTTCCCCCATCAGAATTAGTAAAG
GCCAAAAAGTAGTTGAGCTCCAGCTCCTGGACTAGCTTCCGGATGAAGCT
CTTTAATTTATATTGGCTGGATATTAGCTTATCTAACAAAAAGCATTCAC
ATGGTTAATGCTTTGTAAGAGGGTAAACCCGTTGAAATTTATTAGCAATT
GTTCGAAAGAATCTCTGCTGAGAAANNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNTTTCTTCATCCTCCAAAATTCAAATTTACAGCTTTCTA
CCCTTTATTTTCTGGTAGAAAATGGTATATTTGTTTTGTTGAAAGTATTA
TCTTTCAAATTCTCCTAATTATAGCCTCTAAAATTGACATTTTTCAAATA
TTATGCATTATGCATTATGCAATATGCATTATGTTTTATGCATTTTGGAC
CTGCCGATTGCTTTCACTAACTGCCACCTGCTACAAATGCTTATAACGAC
TAAATGCTGATTAAAGCTTTTTAATGCTTTATAGTGAAATTTTGGAAAAT
TATTAGGAATAATTAAAATGATTCTTCTCAAAAGTATTTTCTTTGGGATA
TCAATAAGCTATCATATAAGAAAATAGAACAATCGAATGTTTATGTGTTT
ACCTATTTTTGGGAAAGAAGAAGGAGGATATCTTTCTGATCTGTTGCATC
TTCTTATTATTCATGCTGACGGAAAACCCTTTGTTGTTATGATTCGAATG
TTTTCTCTTTCATTCGGGTTCGAAATGTAAATATCATGTCTGGGGAAATC
CCTCTGATTGGAATGTTTACTTAAGAAACTCTTCTAAATAGGTTTTCGCG
GTTTTAGCCTCTACAAAGGAGAGTTTTAGAAAATATAAAATCGTTCTGTA
AATTACACTATATGGTATATATATAATCACAGATATCTGTAAAGCCCGAA
GGGCTAGATTTGCGGCTTTTATCAAAAAGTGAAGCTCATCTTTGGAAGGA
TTTCCTACCAGAGTCACGTGACTAAANNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCTA
AATTTCGAAAAAAATATCAATCGTACACAAAGGAATTGCTAGATTCAATC
TGTCGTCAAAAATGCGGCGCATTTTTTAAGGCTTCACTTTTTATTGCCCG
AGAAAGGTTAGAGATTGAACTCTAGCCCTTCGGGCTTTAAACTCAATGGT
TTTATGCATTATGTACCCGTCGGTTTGGCACTCCTACACGGTAGAAGAAA
TGAGAAATACGACGTAAAGTCGTAAACACAATGCAAGTAGTAATCATATT
CCCATTCAAGGATATTATCTAAGGCCCCCTTTATATCACGATCAATAAAA
GTGAGGGCGATAAAAGTATGCTTTTTTATGCTTTCACATAAGCATAGAAA
ATTAATTTTAGTATCTGAACATAAAAGTATGTTTTAGATTCTTTAACACT
TTTAACAAAGAATTGCCTTTATAAATTGCTTTTTAATCAAATCCCTTAAG
AGTAATTAAGAACTTAATTGCTAAAANNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNCCTTCTTTTATAAAAAGTGCTAAGTTTTAATGGGTAATTAACCTT
TTTGTTTCGAACTTTTTTCAAACTGTCCGCAAAGAATTGAACTATTATAA
ATTTTGCGGAAAATATTTCTTAAAAGATGTGTTAAAAGTTATGATATTTT
TTAAGCAAAATCCAGATGAAAATTTAATGAAAAACCACTATTTTGAAGAT
TTCGCGACAAAGAAGCATTTACAAAAATTTTCCGCAAAAATTTTTATTGT
TTGGTAAAAGATACACCATCTATTGCGAAAAAAATTTCAAAATGTTTTTT
CTTCGCCGAAACTAAGCTCTTCAAAGTTGAAATACTCTTCCTCGCAAAAT
TCTTCATTTTCTTCTTCATCAAACTTTTTCAATGCAATTTTTAAATTTTC
AGATTCAAGAATAGTTTGAAAATGTATAACATACCATGGTTTTGTTCATT
ACATCAGTCAGAAAATACATTTTAAACACGGCAATTATGAAAAATTCACT
ATGGTCAGAGCCCTTAATGTATATCAAGGCAACGTTGAATACTCGGTAAA
AAGGAAGAAGAAATATTATTTTATCAGGTAAGTATTATCCCTGTATCACG
CGAGTGGTATTTTAGCTCTCCCCGCCTCTCGCACCTACCTGTGTCACAAC
GAAGGTAATATACCATATTACATCCCTGTCTCATGCAAGAGTGCGAGTGG
TGTTTTGCTTTCCTATCTCCCTGTCTCACAACGAAAGAAATACACAGTAC
ATTTCTGTCTCACAACGAAAGAAATACACAGTACATTTCTGTCTCACAAC
GAAAGAAATACACAGTACATTTCTGTCTCACAACGAAAGAAATACACAGT
ACATTTCTGTCTCACAACGAAAGAAATACACAGTACATTTCTGTCTCACA
ACGAAAGAAATACACAGTACATTTCTGTCTCACAACGAAAGAAATACACA
GTACATTTCTGTCTCACAACGAAAGAAATACACAGTACATTTCTGTCTCA
CAACGAAAGAAATACACAGTACATTTCTGTCTCACAACGAAAGAAATACA
CAGTACATCTCTGTCTCACAACGAAAGAAATACACAGTACATCTCTGTCT
CACAACGAAAGTAATACACAGTACAGATCTGTCTCACAACGAAAGAAATA
CACAGTACAGATCTGTCTCATAACGAAAGAAATACACAGTACATCTCTGT
CTCACAACGAAGAAAATACACAATACATCTCTGTCTCACAACGAAAGAAA
TACACAGTACAGATCTGTCTCATAACGAAAGAAATACACAGTACAGATCT
GTCTCATAACGAAAGAAATACACAGTACATCTCTGTCTCACAACGAAAGA
AATACACAGTACATCTCTGTCTCACAACGAAAGAAATACACAGTACAGAT
CTGTCTCATAACGAAAGAAATAAACAGTACAGATCTGTCTCATAACGAAA
GAAATACACAGTACATCTCTGTCTCACAACGAAGGAAATACACAGTACAT
CTCTGTCTCACAACGAAAGAAATACACAGTACATCTCTGTCTCACAACGA
AAGAAATACACAGTACATCTCTGTCTCACAACGAAGGAAATACACAATAC
ATCTCTGTCTCACAACGAAAGAAATACACAGTACATCTCTGTCTCACAAC
GAAAGAAATACACAGTACATCGTTGTCTCACAACGAAAGAAATACACAGT
ACATCTCTGTCTCACAACGAAGGAAATACACAGTACATCTCTGTCTCACA
ACGAAAGAAATACACAGTACATCGTTGTCTCACAACGAAAGAAATAAACA
GAACATCTCTGTCTCACAACGAAGGAAATACACAGTACAGATCTGTCTCA
TAACGAAAGAAATACACAGTACATCTCTGTCTCACAACGAAAGAAATACA
CAGTACATCTCTGTCTCACAACGAAGGAAATACACAGTACATCTCTGTCT
CACAACGAAGGAAATACACAGTACATCTCTGTCTCACAACGAAAGAAATA
CACAGTACATCGTTGTCTCACAACGAAAGAAATACACAGTACATCTCTGT
CTCACAACGAAAGAAATACACAGTACAGATCTGTCTCATAACGAAAGAAA
TACACAGTACATCTCTGTCTCACAACGAAGGAAATACACAGTACATCTCT
GTCTCACAACGAAAGAAATACACAGTACATCGTTGTCTCACAACGAAAGA
AATAAACAGAACATCTCTGTCTCACAACGAAGGAAATACACAGTACATCT
CTGTCTCACAACGAAAGAAATACACAGTACATCGTTGTCTCACAACGAAA
GAAATACACAGTACATTTCTGTCTCACAACGAAAGAAATACACAGTACAT
CTCTGTCTCACAACCAAAGAAATACACAGTACATCTCTGTCTCACAACGA
AAGAAATACACAGTACATCTCTGTCTCACAACGAAAGAAATACACAGAAC
ATCTCTGTCTCACAACGAAAGAAATACACAGTACATCTCTGTCTCACAAC
GAAAGAAATACACAGTACATCTCTGTCTCACAACGAAAGAAATACACAGT
ACATGTCTGTCTCATAACGAAAGAAATACACAGTACATCTCTGTCTCACA
ACGAAAGAAATACACAGTACATCTCTGTCTCGCAACGAAAGAAATACACA
GTACATCTCTGTCTCACAACGAAAGAAATACACAGTACATCTCTGTCTCA
CAACGAAAGAAATACACAGTACATCTCTGTCTCACAACGAAAGAAATACA
CAGTACATCTCTGTCTCACAACGAAAGAAATACACAGTACATCTCTGTCT
CACAACGAAAGAAATACACAGTACATCTCTGTCTCACAACGAAAGAAATA
TACAGTACATCTCTGTCTCACAACGAAAGAAATACACAGTACATCTCTGT
CTCACAACGAACGAAATACACAGTACATCTCTGTCTCACAACGAAGGAAA
TACACAGTACATCGTTGTCTCATAACGAAAGAAATACACAGTACATCTCT
GTCTCACAACGAAAGAAATACACAGTACATCTCTGTCTCACAACGAAGGA
AATACACAGTACATCGTTGTCTCATAACGAAAGAAATACACAGTACATCT
CTGTCTCACAACGAAAGAAATACACAGTACATCTCTGTCTCACAACGAAA
GAAATACACAGTACATCTTTGTCTCACAACGAAGGAAATACACAGTACAT
CGTTGTCTCATAACGAAAGAAATACACAGTACATCTTTGTCTCACAACGA
AAGAAATACACAGTACATCTCTGTCTCACAACGAAAGAAATACACAGTAC
ATCGTTGTCTCATAACGAAANNCAGTACATCTCTGTCTCACAACGAAAGA
AATACACAGTACATCTCTGTCTCACAACGAAGGAAATACACAGTACATCT
CTGTCTCACAACGAAAGAAATACACAGAACATCTCAGAGCCAATCTCGAG
AAAAGCTGGTAACAGACAAATGGACGGACGAACGAACGAACGAACGAACA
GACAACGGTTAATTCATAGGACCTCCAGCGGGGTACCCGGAGGTAGGCCC
AAAAAGCAAAAGATTTGTAAACATAAATATTAATACAAGTAAAATTTAGT
TTTCATTTATCAGCCTTACTGTACTCGCATATATAGGGGACCTAGCAAAA
GGCAATTTTATGGGGGGAGCTAAGTTGTTGGGCGGAGCTAGAAACCTGGC
TGAAGCTATGCAGTCGACTTGTGCATCAATGCCGAAAACGGCGTTGGTCA
GCTTTTTGGCACGAAAAGTGATGAAATACAGCATTTGTCTGGGAAATTTA
ACAGTGTTGTATTTTTTTTAAATTTGATTATGTTATATCCAAGCAGTGAC
TTACGGGATTAGTAGTTTTATGAATCGGCTTAGGCATTAGCTATATAGTT
GATTTCTACTTGCAAAGCTGTCACTACCACAAAGCAAGGCAGTCCAAGAT
CTCACTCGCCAAAATTCAGTTGATGTTCTCCGATTCGATTTTCAAGGGGA
ATTGGATCTTCATCGAAGAAGGGAGCCTATTTAGGAGAATTTGTTGTTGA
TGGCGACTTTTAATATTATCGAATAACGGAGCGTATTGAATACTTGAACG
TTGAATTCACAGTTCAAGTGTCAACTGTAAGTTTTTACAACAAAACTGCA
GGGTGTGGTTCTTATTATTCAATTCACTCGTTTCGCCTTCTCTTTTTTTT
AGATATTCAATTCGCGCGCATGTCAGTTAGTGTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00011466-exon-sc0000128-1575043694:21879..21982 | TCONS_00011466-exon-sc0000128-1575043694:21879..21982 | Clytia hemisphaerica | exon |
| TCONS_00011466-exon-sc0000128-1575043694:21020..21125 | TCONS_00011466-exon-sc0000128-1575043694:21020..21125 | Clytia hemisphaerica | exon |
| TCONS_00011466-exon-sc0000128-1575043694:4548..4580 | TCONS_00011466-exon-sc0000128-1575043694:4548..4580 | Clytia hemisphaerica | exon |
| TCONS_00011466-exon-sc0000128-1510915933:21879..21982 | TCONS_00011466-exon-sc0000128-1510915933:21879..21982 | Clytia hemisphaerica | exon |
| TCONS_00011466-exon-sc0000128-1510915933:21020..21125 | TCONS_00011466-exon-sc0000128-1510915933:21020..21125 | Clytia hemisphaerica | exon |
| TCONS_00011466-exon-sc0000128-1510915933:4548..4580 | TCONS_00011466-exon-sc0000128-1510915933:4548..4580 | Clytia hemisphaerica | exon |
| TCONS_00011466-exon-sc0000128-1491911889:21879..21982 | TCONS_00011466-exon-sc0000128-1491911889:21879..21982 | Clytia hemisphaerica | exon |
| TCONS_00011466-exon-sc0000128-1491911889:21020..21125 | TCONS_00011466-exon-sc0000128-1491911889:21020..21125 | Clytia hemisphaerica | exon |
| TCONS_00011466-exon-sc0000128-1491911889:4548..4580 | TCONS_00011466-exon-sc0000128-1491911889:4548..4580 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000128 | supercontig | sc0000128:4548..21982 - |
Blast
BLAST of TCONS_00011466 vs. Swiss-Prot (Human)
Match: VPS54 (Vacuolar protein sorting-associated protein 54 OS=Homo sapiens GN=VPS54 PE=1 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 2.176e-21 Identity = 37/58 (63.79%), Postives = 52/58 (89.66%), Query Frame = 1
Query: 70 LFVQGQEFAVVGTLLILMKIIAEYCQCIDDVPMLVTDVMTRLCELLKIFNSRACQLVL 243
L V+GQ++AVVGT+L+L++II EYCQC+D++P + TD++TRL +LLK FNSR+CQLVL
Sbjct: 732 LIVEGQQYAVVGTVLLLIRIILEYCQCVDNIPSVTTDMLTRLSDLLKYFNSRSCQLVL 789
The following BLAST results are available for this feature:
|
