TCONS_00011470 (transcript) - C. hemisphaerica

Overview
NameTCONS_00011470
Unique NameTCONS_00011470
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1466

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00011470 ID=TCONS_00011470|Name=TCONS_00011470|organism=Clytia hemisphaerica|type=transcript|length=1466bp
ATGGTACCCTTTgttttcagtcatttgtttggtcattttccgTTGACTTA
TGTGATCTAAAAATCATGacTTCGTCCTCAAGCTTTCCTGGTGGATACCC
TGGATATGACGATTCTTGGAATTTCAATACATTTAAAGAGAACTTTCGAG
TTGACATAGTTTCACTAAATGAGAAGGAAATGGAATTTGACATGGTGGGG
ATTGATGCTTCAATTGCTAATGCCTTTCGTAGGATTCTTATTGCAGAGGT
ACCGTCAATGGCCATTGATAAAGTTTTTATATTCAACAACTCCTCAATCA
TTCAGGACGAGGTCCTTGCTCACAGACTTGGACTGATACCAATCTTTGCT
GACCCAAGGTTGTTCAACTTCCCTCCAACTCCAGTAGAAGGCAAAAACTT
GACTGAGGAAGAACAACTTCACACAGAACCTGATGTTCATTTGGTGTTCG
AACTGAAAGTGAAATGCACTATGAATCCTGAAGCCCCCAAAGATTGTGTC
AACCCTGAAATTATGTACTTGAATAATAAAGTGACAACGAAAGACATCAA
ATGGATACCTATAGGTGATCAGGAGGAACAGTTTGGTGTTGATGGCATAC
GCCCTGTGTTTGATGACATTCTAATTGCCAAGTTGAGACCTGGACACGAA
ATCGATCTGAGAATGCATTGTGTCAAAGGAGTTGGTTGTGATCATGCCAA
GTTCAGTCCAGTAGcgACTGCTTCATATCGGTTATTACCATCGATCACAT
TGTTGGACACAATCACGGATGACTTAGCAGACCGTCTCATCAAGTGTTTC
AGTAAAGATGTCATCAAAACGAAAACCAAAAATGGAGTAAAAAAAGCATA
CGTTGCAGACGCACGAAAAGACACAGGGATGCGTGAAATATATCGTGATG
AGGTGCTAAGGGACAAAGTCAAACTCGAAAAAATAAGAGACCATTTCATA
TttTCAGTCGAATCTACAGGTGCACTACCCCCTGAACAGCTGGTCGAGGA
AGCCATTAAGATCTTACACGCCAAATGTCAAATTTACGTCGACAAACTGA
ATAGTTTatgatgaaaagaaaagaaataggAAAATGTCATGGTTTATTCG
TGAAGTCACAGAGAGGCCATATAAAAAATGGCGGACTCGATTGCATATCT
TTTGATTGTACATGAGGAAAGCAGTCAGCGCGGGAACCTAATGATCTGAT
CCACCAATATTTGGATGGTTGCTTGGTGAGAGATCAAATAATGGAAAGAA
GATTTTCGTTTTTGTTATGTTTCTCGTACTGAATAAAAGGACacgatgaa
aataaaatgtcgTGTTTGGAAAATCATGATGGGTTGGCATATCGTGAAAA
AGACATTtcaaaaatgagagaaaaataTATTAGCACATTTATTTTTAGCA
GAGGGAGGTATAGTAAACGGTGTTGTGGAATTTgttgtgaaaatttgaat
ttcagaTTTCTTTCTT
Run BLAST on NCBI

protein sequence of TCONS_00011470-protein

>TCONS_00011470-protein ID=TCONS_00011470-protein|Name=TCONS_00011470-protein|organism=Clytia hemisphaerica|type=polypeptide|length=352bp
GTLCFQSFVWSFSVDLCDLKIMTSSSSFPGGYPGYDDSWNFNTFKENFRV
DIVSLNEKEMEFDMVGIDASIANAFRRILIAEVPSMAIDKVFIFNNSSII
QDEVLAHRLGLIPIFADPRLFNFPPTPVEGKNLTEEEQLHTEPDVHLVFE
LKVKCTMNPEAPKDCVNPEIMYLNNKVTTKDIKWIPIGDQEEQFGVDGIR
PVFDDILIAKLRPGHEIDLRMHCVKGVGCDHAKFSPVATASYRLLPSITL
LDTITDDLADRLIKCFSKDVIKTKTKNGVKKAYVADARKDTGMREIYRDE
VLRDKVKLEKIRDHFIFSVESTGALPPEQLVEEAIKILHAKCQIYVDKLN
SL
Run BLAST on NCBI

transcript from alignment at sc0000128:120715..126157-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00011470 ID=TCONS_00011470|Name=TCONS_00011470|organism=Clytia hemisphaerica|type=transcript|length=5443bp|location=Sequence derived from alignment at sc0000128:120715..126157- (Clytia hemisphaerica)
ATGGTACCCTTTGTTTTCAGTCATTTGTTTGGTCATTTTCCGTTGACTTA
TGTGATCTAAAAATCATGGTAATTTTCACGTATTTGTGACATGCCATAAC
TTACCCGAGATTATTTGTTGCTTTGAATTGCACAAAAGTTGGATCTATAA
TAGTTGGAGAATGTGACGTTCTATTGAGTAACAAATCACTCAGCCATATT
ATTATTACTATTTCTACTTTTCCTCAGCCCAGTACAAACAGGATAAATTT
ATCTTGTTCCTAGCTAACAGCTGTGTTGTAATGATGAATCAATTGTATGA
TGTTATCATTTAAAAAAATTATGCCAGAGTAATTAGTTATCCAAAAGACT
GTCACAACTATTACCTGAATACCTTTCCTGTAATAGTTCAAAATCGAAAG
ATGATTGGAACATTTGATTGGAAAATTTCACAAATAGTATTTTTTCAAGG
ACATTGTCCTTTCTCAAATTTATGTTTACTAGTTGTATCAAAATTAATAT
TATCATACCAGTAAGGCCAGCTACCTTTTGAATATGTTTTTATTGATTTT
TTTTTAGACTTCGTCCTCAAGCTTTCCTGGTGGATACCCTGGATATGACG
ATTCTTGGAATTTCAATACATTTAAAGAGGTTTTAAGATTTGAAAATAAT
CTTTTTGATATCACAAATTTTATGATCAGTTTTGTTGCTATTGAGTGTCA
TTGGGATCTTTTTTTGGGAAACCATTTGTAAGAAAGAGAAACATGGTTAA
AAAATCCAATGATAATAACCACATTCTTTTTAACTGGTCAACATAAAATA
AAAAAGAAGCATGATATAAATACCAGAAAAGATCTAAGCAATATTTCTTT
GTATTTATAGAACTTTCGAGTTGACATAGTTTCACTAAATGAGAAGGAAA
TGGAATTTGACATGGTGGGGATTGATGCTTCAATTGCTAATGCCTTTCGT
AGGATTCTTATTGCAGAGGTATATAAATTAATTAATAAATTTTCACAAAT
AACAATAATTCGACTCATATTCTGATATCAGGCTTGTCAAATTTAAGAAA
TTATACATCTTATGATTGTCCATACATCTTCTAAAAATCAGACAGCTCAC
TCAAGGCAAGAGACTTCTCTTAATGTATAGTTCTCTTAAAATATAAGTTC
CCCTATATTTATGCTGTTATAGTAATCACTGTGTGATTTTGTTCACTAAA
ATAATTAACCCTCCAACACAACGCCATATTATTTTTTTGCTTGGAGCAAA
GGCGATACTACTTCATATTCTAATGTCTTCAGAAATTTGTATTTTTACCA
ACATTTTGTCAATTTTTAGAAAAAGTATTTTCGCATCTTTAGGTACCGTC
AATGGCCATTGATAAAGTTTTTATATTCAACAACTCCTCAATCATTCAGG
ACGAGGTAAACATTCAACCAGTCAACTTTTTTCAATAATAAAACCCATTT
TGAGCTGGAAACTTAGAAATTAAGTTTAAAGAGAGTTATATCAACTTTTT
GGTTCGTTTTTAAAAAGTCACTCTTCACTCGTTAATTGCTCGATCCTAGA
ACATAACTCAAGTAGAGACTGGTTGAGAACATATAGGGGAAATTTTCCTT
ACAGAGCTTAGATTTTCAGCAAATTGTCTGCTAATTGTTTTATTTTATTC
CTTAAATTGATATTCACCTCTTTGTTCATATAGTGGTAGTTCAAAATAAT
TCAATAGACTTAAAAGTCGATGAGTATGTAGAGAGACTCGATTTGTAACC
AGTTTGAATAGTGATCAACCCTTTCTTTCAGGTCCTTGCTCACAGACTTG
GACTGATACCAATCTTTGCTGACCCAAGGTTGTTCAACTTCCCTCCAACT
CCAGTAGAAGGCAAAAACTTGACTGGTCGGTATAAAGTTATGATTTTTTT
CATTATAATATTCTTGGCTTGGTTTTGTTACTTGTCTGCTGTAAATTTTC
CTTGCAATATTGCAAAGAAGTGTGGACAATTCATTTTACGGCAGTTATTG
GACAATAACTTTTACAATACTCCTCCTAGACTCATTGTCCCTATTATTAA
AAGTAAGCTAATGGACAGCATTGCACGCTTCTATCGTGATGATATTTTCA
TATTTGTTTTGTTATAGAGGAAGAACAACTTCACACAGAACCTGATGTTC
ATTTGGTGTTCGAACTGAAAGTGAAATGCACTATGAATCCTGAAGCCCCC
AAAGATTGTGTCAACCCTGAAATTATGTACTTGAATAATAAAGGTATTTC
AAGCAAGAATTTACCTACAAACTAAACATCAGATACGGAATTCCCTCAAC
TTTGGCTCTCCAGAGAGAGAAAAAATAAGAACATTTTTGAAACATTTGAC
TTACAGACATTACATACCGACTCGAAGTTTTCCCCTGATTTCCTTTCCCA
CAACATTTTTTTCCTTATCATATTGAGATAGTTTATCATGAGAGAATGGA
TGATTATATTTTCAGTGACAACGAAAGACATCAAATGGATACCTATAGGT
GATCAGGAGGAACAGGTAAGCAAGTTCAAGTCATGGCATCGATACCCAGT
GTTGAAGTGCTTCCATCTCAAACGGATTTTCGTCTCAGTGAAGTACATAG
CTTCAGCCAGGTTTTTAGCTCCCCCCAACAAAGGAAGGTCCCCCCCGACA
ATTTAGCTCCCCAAAAAAAATTGCCTTGTGCTAGGCCCCCTATGCGAGTA
CAGTAAGACTGATAAATGAAAACTAAATTTTACTTGTATTAATATTTATG
TTTACAAATCTTTTGCTTTTTATATTTCATTTAATAGTAAGATAAGAGAT
CTTTTGAAATTAGCTGAACAGCCCCCAGAGTCTCAGTTATATCATCAACT
CCCCCAACAATCTAGTCCCCCCCCCCTGTAAAAAATAAGGGGGGGGGCCT
GATGCTATGAAGTATATAAAGAGGCTTTTCCCTATCAAAATTCTCCATAT
TTCACCAAAATTTTAAGAGCAATTGCTAATTTGCGGTGTAAAATCCATTT
TTCCATTTCAGACGAAAAACTTTGTTTTGACCACGGTATATTTTTTACCA
ATATTAGAAATATATAAGAAAATAGAAGAATACTCCTGGAGGCTAACCAA
CTAAATTCCGTGGATATTGCAGGAGCTTTCAATGTTAAAACATTTCCAGT
GGTTTCTTAACAATATAAACAGATACAAACTCATTTTATCCATCTCTGTC
CACTTTTATATATAGTTTGGTGTTGATGGCATACGCCCTGTGTTTGATGA
CATTCTAATTGCCAAGTTGAGACCTGGACACGAAATCGATCTGAGAATGC
ATTGTGTCAAAGGAGTTGGTTGTGATCATGCCAAGTTCAGTCCAGTAGGT
GAGTTGCCTCTACAAATAATTGGTTGAGTTTTTCTTTAATAAATTTTGTA
CAACTGTCAATGAAATATTATATTCAAAGTTTAACAACCTTGGTCTTTTG
CCAAGTTAGACATTACCCCCCCCCCCTGGACGTGACTCTCAACCTCTTTC
TACCTCATTGCAGATGCAGAAAAATTACAAATGGTATATGTTATGTTTAT
GATAGGTCCCATATTGGAAGGAATTATTCTATTATAAACGGCTCTTACGA
AATTCGGACAAGTCGGTTATCAATGAAGTAGTAAATATTGAAGAGCTGAT
AGGTCTCTCTGGCGTTTTAAACCACTTATTTTTGTATGTCATATTCAAAT
TCCTTATAAAGTTACTGATTCTTGCTCCTTTGTACTTGTGGAAACATGGA
AAGTTGGACATGGGTCTAGTCTAGAGCGAACTAGAAAATTAGAAAGTTTT
TCCAGAAATATTTGAAGTATAAAACATTTTTTAGCGACTGCTTCATATCG
GTTATTACCATCGATCACATTGTTGGACACAATCACGGATGACTTAGCAG
ACCGTCTCATCAAGTGTTTCAGTAAAGATGTCATCAAAACGAAAACCAAA
AATGGTGAGTGCAATATCTCTCACAACCTACTACTCGTACTACTAAGTAT
TTTCATATGTACATTCGAGAGGTTGCTGAATTCGAGCCATCAAATTACTC
GCGTCTTTCTGTGATTTTAATTTAAACGTTGCTCTCCACATATGCAAAGG
TCATACACTTTCATGGAAGCATGGAGAGTGTCTTTGGCAACAGAATTCTT
CTCCAATTAAGAAAAGAATTTGGTCAGTTATGATCCTTGTATGACTTTCT
TAATTTAATTAGTGAAGAGACTTCTTCTTTTGAATTTAACAGGAGTAAAA
AAAGCATACGTTGCAGACGCACGAAAAGACACAGGGATGCGTGAAATATA
TCGTGATGAGGTAATTCTATATTGATATATTACATTGGTGATGTCTATAG
AACATTCCAGATACTATAAACCAGACCCCATTACTCGAACAGTTCGAGAA
ACTAACTACTCGAAATTATCGAGTCTGGCATAAACATTGCTTCGTTGCGG
TAACCCATAACGATGAAAGTAAATCTCGTTGTATTAATTTCTAATAATAA
TTTAATGATCATACTTCTTAATTCTTACTTTTTAGGTGCTAAGGGACAAA
GTCAAACTCGAAAAAATAAGAGACCATTTCATATGTAAGTTTTTTAATTC
CGTTTACATTTTGTCTTTAAAATTAAAATATACTGTGTCCCGAAAAAAAG
AACGGTTCAAAACGGGAAAGTTATTTCGTTTGCGAAAATCAAGTTGTCCA
TCGTTACTTTTCCTAGGTAGGGATAGTTTAGGGATACGAACCATGTTCCA
CATCTGCAAAGAACCATGCTCATAGCCTAGGGAATCGATTTTTTATGGGT
AAATTAGTATGCTTTAACTTTTCAACATTTTTGAGATATTTTATTTGCCT
TCTTACGTTAGATGCTATCATTGCTCATATGTTTTGTTTGTTGATGAAAG
AAATTAATCATAATTTTCATTTATTTAGTTTCAGTCGAATCTACAGGTGC
ACTACCCCCTGAACAGCTGGTCGAGGAAGCCATTAAGATCTTACACGCCA
AATGTCAAATTTACGTCGACAAACTGAATAGTTTATGATGAAAAGAAAAG
AAATAGGAAAATGTCATGGTTTATTCGTGAAGTCACAGAGAGGCCATATA
AAAAATGGCGGACTCGATTGCATATCTTTTGATTGTACATGAGGAAAGCA
GTCAGCGCGGGAACCTAATGATCTGATCCACCAATATTTGGATGGTTGCT
TGGTGAGAGATCAAATAATGGAAAGAAGATTTTCGTTTTTGTTATGTTTC
TCGTACTGAATAAAAGGACACGATGAAAATAAAATGTCGTGTTTGGAAAA
TCATGATGGGTTGGCATATCGTGAAAAAGACATTTCAAAAATGAGAGAAA
AATATATTAGCACATTTATTTTTAGCAGAGGGAGGTATAGTAAACGGTGT
TGTGGAATTTGTTGTGAAAATTTGAATTTCAGATTTCTTTCTT

Coding sequence (CDS) from alignment at sc0000128:120715..126157-

>TCONS_00011470 ID=TCONS_00011470|Name=TCONS_00011470|organism=Clytia hemisphaerica|type=CDS|length=12708bp|location=Sequence derived from alignment at sc0000128:120715..126157- (Clytia hemisphaerica)
TTTCAGTCGAATCTACAGGTGCACTACCCCCTGAACAGCTGGTCGAGGAA
GCCATTAAGATCTTACACGCCAAATGTCAAATTTACGTCGACAAACTGAA
TAGTTTATGAGTGCTAAGGGACAAAGTCAAACTCGAAAAAATAAGAGACC
ATTTCATATGAGTAAAAAAAGCATACGTTGCAGACGCACGAAAAGACACA
GGGATGCGTGAAATATATCGTGATGAGCGACTGCTTCATATCGGTTATTA
CCATCGATCACATTGTTGGACACAATCACGGATGACTTAGCAGACCGTCT
CATCAAGTGTTTCAGTAAAGATGTCATCAAAACGAAAACCAAAAATGTTT
GGTGTTGATGGCATACGCCCTGTGTTTGATGACATTCTAATTGCCAAGTT
GAGACCTGGACACGAAATCGATCTGAGAATGCATTGTGTCAAAGGAGTTG
GTTGTGATCATGCCAAGTTCAGTCCAGTAGTGACAACGAAAGACATCAAA
TGGATACCTATAGGTGATCAGGAGGAACAGAGGAAGAACAACTTCACACA
GAACCTGATGTTCATTTGGTGTTCGAACTGAAAGTGAAATGCACTATGAA
TCCTGAAGCCCCCAAAGATTGTGTCAACCCTGAAATTATGTACTTGAATA
ATAAAGGTCCTTGCTCACAGACTTGGACTGATACCAATCTTTGCTGACCC
AAGGTTGTTCAACTTCCCTCCAACTCCAGTAGAAGGCAAAAACTTGACTG
GTACCGTCAATGGCCATTGATAAAGTTTTTATATTCAACAACTCCTCAAT
CATTCAGGACGAGAACTTTCGAGTTGACATAGTTTCACTAAATGAGAAGG
AAATGGAATTTGACATGGTGGGGATTGATGCTTCAATTGCTAATGCCTTT
CGTAGGATTCTTATTGCAGAGACTTCGTCCTCAAGCTTTCCTGGTGGATA
CCCTGGATATGACGATTCTTGGAATTTCAATACATTTAAAGAGGGTACCC
TTTGTTTTCAGTCATTTGTTTGGTCATTTTCCGTTGACTTATGTGATCTA
AAAATCATGTTTCAGTCGAATCTACAGGTGCACTACCCCCTGAACAGCTG
GTCGAGGAAGCCATTAAGATCTTACACGCCAAATGTCAAATTTACGTCGA
CAAACTGAATAGTTTATGAGTGCTAAGGGACAAAGTCAAACTCGAAAAAA
TAAGAGACCATTTCATATGAGTAAAAAAAGCATACGTTGCAGACGCACGA
AAAGACACAGGGATGCGTGAAATATATCGTGATGAGCGACTGCTTCATAT
CGGTTATTACCATCGATCACATTGTTGGACACAATCACGGATGACTTAGC
AGACCGTCTCATCAAGTGTTTCAGTAAAGATGTCATCAAAACGAAAACCA
AAAATGTTTGGTGTTGATGGCATACGCCCTGTGTTTGATGACATTCTAAT
TGCCAAGTTGAGACCTGGACACGAAATCGATCTGAGAATGCATTGTGTCA
AAGGAGTTGGTTGTGATCATGCCAAGTTCAGTCCAGTAGTGACAACGAAA
GACATCAAATGGATACCTATAGGTGATCAGGAGGAACAGAGGAAGAACAA
CTTCACACAGAACCTGATGTTCATTTGGTGTTCGAACTGAAAGTGAAATG
CACTATGAATCCTGAAGCCCCCAAAGATTGTGTCAACCCTGAAATTATGT
ACTTGAATAATAAAGGTCCTTGCTCACAGACTTGGACTGATACCAATCTT
TGCTGACCCAAGGTTGTTCAACTTCCCTCCAACTCCAGTAGAAGGCAAAA
ACTTGACTGGTACCGTCAATGGCCATTGATAAAGTTTTTATATTCAACAA
CTCCTCAATCATTCAGGACGAGAACTTTCGAGTTGACATAGTTTCACTAA
ATGAGAAGGAAATGGAATTTGACATGGTGGGGATTGATGCTTCAATTGCT
AATGCCTTTCGTAGGATTCTTATTGCAGAGACTTCGTCCTCAAGCTTTCC
TGGTGGATACCCTGGATATGACGATTCTTGGAATTTCAATACATTTAAAG
AGGGTACCCTTTGTTTTCAGTCATTTGTTTGGTCATTTTCCGTTGACTTA
TGTGATCTAAAAATCATGTTTCAGTCGAATCTACAGGTGCACTACCCCCT
GAACAGCTGGTCGAGGAAGCCATTAAGATCTTACACGCCAAATGTCAAAT
TTACGTCGACAAACTGAATAGTTTATGAGTGCTAAGGGACAAAGTCAAAC
TCGAAAAAATAAGAGACCATTTCATATGAGTAAAAAAAGCATACGTTGCA
GACGCACGAAAAGACACAGGGATGCGTGAAATATATCGTGATGAGCGACT
GCTTCATATCGGTTATTACCATCGATCACATTGTTGGACACAATCACGGA
TGACTTAGCAGACCGTCTCATCAAGTGTTTCAGTAAAGATGTCATCAAAA
CGAAAACCAAAAATGTTTGGTGTTGATGGCATACGCCCTGTGTTTGATGA
CATTCTAATTGCCAAGTTGAGACCTGGACACGAAATCGATCTGAGAATGC
ATTGTGTCAAAGGAGTTGGTTGTGATCATGCCAAGTTCAGTCCAGTAGTG
ACAACGAAAGACATCAAATGGATACCTATAGGTGATCAGGAGGAACAGAG
GAAGAACAACTTCACACAGAACCTGATGTTCATTTGGTGTTCGAACTGAA
AGTGAAATGCACTATGAATCCTGAAGCCCCCAAAGATTGTGTCAACCCTG
AAATTATGTACTTGAATAATAAAGGTCCTTGCTCACAGACTTGGACTGAT
ACCAATCTTTGCTGACCCAAGGTTGTTCAACTTCCCTCCAACTCCAGTAG
AAGGCAAAAACTTGACTGGTACCGTCAATGGCCATTGATAAAGTTTTTAT
ATTCAACAACTCCTCAATCATTCAGGACGAGAACTTTCGAGTTGACATAG
TTTCACTAAATGAGAAGGAAATGGAATTTGACATGGTGGGGATTGATGCT
TCAATTGCTAATGCCTTTCGTAGGATTCTTATTGCAGAGACTTCGTCCTC
AAGCTTTCCTGGTGGATACCCTGGATATGACGATTCTTGGAATTTCAATA
CATTTAAAGAGGGTACCCTTTGTTTTCAGTCATTTGTTTGGTCATTTTCC
GTTGACTTATGTGATCTAAAAATCATGTTTCAGTCGAATCTACAGGTGCA
CTACCCCCTGAACAGCTGGTCGAGGAAGCCATTAAGATCTTACACGCCAA
ATGTCAAATTTACGTCGACAAACTGAATAGTTTATGAGTGCTAAGGGACA
AAGTCAAACTCGAAAAAATAAGAGACCATTTCATATGAGTAAAAAAAGCA
TACGTTGCAGACGCACGAAAAGACACAGGGATGCGTGAAATATATCGTGA
TGAGCGACTGCTTCATATCGGTTATTACCATCGATCACATTGTTGGACAC
AATCACGGATGACTTAGCAGACCGTCTCATCAAGTGTTTCAGTAAAGATG
TCATCAAAACGAAAACCAAAAATGTTTGGTGTTGATGGCATACGCCCTGT
GTTTGATGACATTCTAATTGCCAAGTTGAGACCTGGACACGAAATCGATC
TGAGAATGCATTGTGTCAAAGGAGTTGGTTGTGATCATGCCAAGTTCAGT
CCAGTAGTGACAACGAAAGACATCAAATGGATACCTATAGGTGATCAGGA
GGAACAGAGGAAGAACAACTTCACACAGAACCTGATGTTCATTTGGTGTT
CGAACTGAAAGTGAAATGCACTATGAATCCTGAAGCCCCCAAAGATTGTG
TCAACCCTGAAATTATGTACTTGAATAATAAAGGTCCTTGCTCACAGACT
TGGACTGATACCAATCTTTGCTGACCCAAGGTTGTTCAACTTCCCTCCAA
CTCCAGTAGAAGGCAAAAACTTGACTGGTACCGTCAATGGCCATTGATAA
AGTTTTTATATTCAACAACTCCTCAATCATTCAGGACGAGAACTTTCGAG
TTGACATAGTTTCACTAAATGAGAAGGAAATGGAATTTGACATGGTGGGG
ATTGATGCTTCAATTGCTAATGCCTTTCGTAGGATTCTTATTGCAGAGAC
TTCGTCCTCAAGCTTTCCTGGTGGATACCCTGGATATGACGATTCTTGGA
ATTTCAATACATTTAAAGAGGGTACCCTTTGTTTTCAGTCATTTGTTTGG
TCATTTTCCGTTGACTTATGTGATCTAAAAATCATGTTTCAGTCGAATCT
ACAGGTGCACTACCCCCTGAACAGCTGGTCGAGGAAGCCATTAAGATCTT
ACACGCCAAATGTCAAATTTACGTCGACAAACTGAATAGTTTATGAGTGC
TAAGGGACAAAGTCAAACTCGAAAAAATAAGAGACCATTTCATATGAGTA
AAAAAAGCATACGTTGCAGACGCACGAAAAGACACAGGGATGCGTGAAAT
ATATCGTGATGAGCGACTGCTTCATATCGGTTATTACCATCGATCACATT
GTTGGACACAATCACGGATGACTTAGCAGACCGTCTCATCAAGTGTTTCA
GTAAAGATGTCATCAAAACGAAAACCAAAAATGTTTGGTGTTGATGGCAT
ACGCCCTGTGTTTGATGACATTCTAATTGCCAAGTTGAGACCTGGACACG
AAATCGATCTGAGAATGCATTGTGTCAAAGGAGTTGGTTGTGATCATGCC
AAGTTCAGTCCAGTAGTGACAACGAAAGACATCAAATGGATACCTATAGG
TGATCAGGAGGAACAGAGGAAGAACAACTTCACACAGAACCTGATGTTCA
TTTGGTGTTCGAACTGAAAGTGAAATGCACTATGAATCCTGAAGCCCCCA
AAGATTGTGTCAACCCTGAAATTATGTACTTGAATAATAAAGGTCCTTGC
TCACAGACTTGGACTGATACCAATCTTTGCTGACCCAAGGTTGTTCAACT
TCCCTCCAACTCCAGTAGAAGGCAAAAACTTGACTGGTACCGTCAATGGC
CATTGATAAAGTTTTTATATTCAACAACTCCTCAATCATTCAGGACGAGA
ACTTTCGAGTTGACATAGTTTCACTAAATGAGAAGGAAATGGAATTTGAC
ATGGTGGGGATTGATGCTTCAATTGCTAATGCCTTTCGTAGGATTCTTAT
TGCAGAGACTTCGTCCTCAAGCTTTCCTGGTGGATACCCTGGATATGACG
ATTCTTGGAATTTCAATACATTTAAAGAGGGTACCCTTTGTTTTCAGTCA
TTTGTTTGGTCATTTTCCGTTGACTTATGTGATCTAAAAATCATGTTTCA
GTCGAATCTACAGGTGCACTACCCCCTGAACAGCTGGTCGAGGAAGCCAT
TAAGATCTTACACGCCAAATGTCAAATTTACGTCGACAAACTGAATAGTT
TATGAGTGCTAAGGGACAAAGTCAAACTCGAAAAAATAAGAGACCATTTC
ATATGAGTAAAAAAAGCATACGTTGCAGACGCACGAAAAGACACAGGGAT
GCGTGAAATATATCGTGATGAGCGACTGCTTCATATCGGTTATTACCATC
GATCACATTGTTGGACACAATCACGGATGACTTAGCAGACCGTCTCATCA
AGTGTTTCAGTAAAGATGTCATCAAAACGAAAACCAAAAATGTTTGGTGT
TGATGGCATACGCCCTGTGTTTGATGACATTCTAATTGCCAAGTTGAGAC
CTGGACACGAAATCGATCTGAGAATGCATTGTGTCAAAGGAGTTGGTTGT
GATCATGCCAAGTTCAGTCCAGTAGTGACAACGAAAGACATCAAATGGAT
ACCTATAGGTGATCAGGAGGAACAGAGGAAGAACAACTTCACACAGAACC
TGATGTTCATTTGGTGTTCGAACTGAAAGTGAAATGCACTATGAATCCTG
AAGCCCCCAAAGATTGTGTCAACCCTGAAATTATGTACTTGAATAATAAA
GGTCCTTGCTCACAGACTTGGACTGATACCAATCTTTGCTGACCCAAGGT
TGTTCAACTTCCCTCCAACTCCAGTAGAAGGCAAAAACTTGACTGGTACC
GTCAATGGCCATTGATAAAGTTTTTATATTCAACAACTCCTCAATCATTC
AGGACGAGAACTTTCGAGTTGACATAGTTTCACTAAATGAGAAGGAAATG
GAATTTGACATGGTGGGGATTGATGCTTCAATTGCTAATGCCTTTCGTAG
GATTCTTATTGCAGAGACTTCGTCCTCAAGCTTTCCTGGTGGATACCCTG
GATATGACGATTCTTGGAATTTCAATACATTTAAAGAGGGTACCCTTTGT
TTTCAGTCATTTGTTTGGTCATTTTCCGTTGACTTATGTGATCTAAAAAT
CATGTTTCAGTCGAATCTACAGGTGCACTACCCCCTGAACAGCTGGTCGA
GGAAGCCATTAAGATCTTACACGCCAAATGTCAAATTTACGTCGACAAAC
TGAATAGTTTATGAGTGCTAAGGGACAAAGTCAAACTCGAAAAAATAAGA
GACCATTTCATATGAGTAAAAAAAGCATACGTTGCAGACGCACGAAAAGA
CACAGGGATGCGTGAAATATATCGTGATGAGCGACTGCTTCATATCGGTT
ATTACCATCGATCACATTGTTGGACACAATCACGGATGACTTAGCAGACC
GTCTCATCAAGTGTTTCAGTAAAGATGTCATCAAAACGAAAACCAAAAAT
GTTTGGTGTTGATGGCATACGCCCTGTGTTTGATGACATTCTAATTGCCA
AGTTGAGACCTGGACACGAAATCGATCTGAGAATGCATTGTGTCAAAGGA
GTTGGTTGTGATCATGCCAAGTTCAGTCCAGTAGTGACAACGAAAGACAT
CAAATGGATACCTATAGGTGATCAGGAGGAACAGAGGAAGAACAACTTCA
CACAGAACCTGATGTTCATTTGGTGTTCGAACTGAAAGTGAAATGCACTA
TGAATCCTGAAGCCCCCAAAGATTGTGTCAACCCTGAAATTATGTACTTG
AATAATAAAGGTCCTTGCTCACAGACTTGGACTGATACCAATCTTTGCTG
ACCCAAGGTTGTTCAACTTCCCTCCAACTCCAGTAGAAGGCAAAAACTTG
ACTGGTACCGTCAATGGCCATTGATAAAGTTTTTATATTCAACAACTCCT
CAATCATTCAGGACGAGAACTTTCGAGTTGACATAGTTTCACTAAATGAG
AAGGAAATGGAATTTGACATGGTGGGGATTGATGCTTCAATTGCTAATGC
CTTTCGTAGGATTCTTATTGCAGAGACTTCGTCCTCAAGCTTTCCTGGTG
GATACCCTGGATATGACGATTCTTGGAATTTCAATACATTTAAAGAGGGT
ACCCTTTGTTTTCAGTCATTTGTTTGGTCATTTTCCGTTGACTTATGTGA
TCTAAAAATCATGTTTCAGTCGAATCTACAGGTGCACTACCCCCTGAACA
GCTGGTCGAGGAAGCCATTAAGATCTTACACGCCAAATGTCAAATTTACG
TCGACAAACTGAATAGTTTATGAGTGCTAAGGGACAAAGTCAAACTCGAA
AAAATAAGAGACCATTTCATATGAGTAAAAAAAGCATACGTTGCAGACGC
ACGAAAAGACACAGGGATGCGTGAAATATATCGTGATGAGCGACTGCTTC
ATATCGGTTATTACCATCGATCACATTGTTGGACACAATCACGGATGACT
TAGCAGACCGTCTCATCAAGTGTTTCAGTAAAGATGTCATCAAAACGAAA
ACCAAAAATGTTTGGTGTTGATGGCATACGCCCTGTGTTTGATGACATTC
TAATTGCCAAGTTGAGACCTGGACACGAAATCGATCTGAGAATGCATTGT
GTCAAAGGAGTTGGTTGTGATCATGCCAAGTTCAGTCCAGTAGTGACAAC
GAAAGACATCAAATGGATACCTATAGGTGATCAGGAGGAACAGAGGAAGA
ACAACTTCACACAGAACCTGATGTTCATTTGGTGTTCGAACTGAAAGTGA
AATGCACTATGAATCCTGAAGCCCCCAAAGATTGTGTCAACCCTGAAATT
ATGTACTTGAATAATAAAGGTCCTTGCTCACAGACTTGGACTGATACCAA
TCTTTGCTGACCCAAGGTTGTTCAACTTCCCTCCAACTCCAGTAGAAGGC
AAAAACTTGACTGGTACCGTCAATGGCCATTGATAAAGTTTTTATATTCA
ACAACTCCTCAATCATTCAGGACGAGAACTTTCGAGTTGACATAGTTTCA
CTAAATGAGAAGGAAATGGAATTTGACATGGTGGGGATTGATGCTTCAAT
TGCTAATGCCTTTCGTAGGATTCTTATTGCAGAGACTTCGTCCTCAAGCT
TTCCTGGTGGATACCCTGGATATGACGATTCTTGGAATTTCAATACATTT
AAAGAGGGTACCCTTTGTTTTCAGTCATTTGTTTGGTCATTTTCCGTTGA
CTTATGTGATCTAAAAATCATGTTTCAGTCGAATCTACAGGTGCACTACC
CCCTGAACAGCTGGTCGAGGAAGCCATTAAGATCTTACACGCCAAATGTC
AAATTTACGTCGACAAACTGAATAGTTTATGAGTGCTAAGGGACAAAGTC
AAACTCGAAAAAATAAGAGACCATTTCATATGAGTAAAAAAAGCATACGT
TGCAGACGCACGAAAAGACACAGGGATGCGTGAAATATATCGTGATGAGC
GACTGCTTCATATCGGTTATTACCATCGATCACATTGTTGGACACAATCA
CGGATGACTTAGCAGACCGTCTCATCAAGTGTTTCAGTAAAGATGTCATC
AAAACGAAAACCAAAAATGTTTGGTGTTGATGGCATACGCCCTGTGTTTG
ATGACATTCTAATTGCCAAGTTGAGACCTGGACACGAAATCGATCTGAGA
ATGCATTGTGTCAAAGGAGTTGGTTGTGATCATGCCAAGTTCAGTCCAGT
AGTGACAACGAAAGACATCAAATGGATACCTATAGGTGATCAGGAGGAAC
AGAGGAAGAACAACTTCACACAGAACCTGATGTTCATTTGGTGTTCGAAC
TGAAAGTGAAATGCACTATGAATCCTGAAGCCCCCAAAGATTGTGTCAAC
CCTGAAATTATGTACTTGAATAATAAAGGTCCTTGCTCACAGACTTGGAC
TGATACCAATCTTTGCTGACCCAAGGTTGTTCAACTTCCCTCCAACTCCA
GTAGAAGGCAAAAACTTGACTGGTACCGTCAATGGCCATTGATAAAGTTT
TTATATTCAACAACTCCTCAATCATTCAGGACGAGAACTTTCGAGTTGAC
ATAGTTTCACTAAATGAGAAGGAAATGGAATTTGACATGGTGGGGATTGA
TGCTTCAATTGCTAATGCCTTTCGTAGGATTCTTATTGCAGAGACTTCGT
CCTCAAGCTTTCCTGGTGGATACCCTGGATATGACGATTCTTGGAATTTC
AATACATTTAAAGAGGGTACCCTTTGTTTTCAGTCATTTGTTTGGTCATT
TTCCGTTGACTTATGTGATCTAAAAATCATGTTTCAGTCGAATCTACAGG
TGCACTACCCCCTGAACAGCTGGTCGAGGAAGCCATTAAGATCTTACACG
CCAAATGTCAAATTTACGTCGACAAACTGAATAGTTTATGAGTGCTAAGG
GACAAAGTCAAACTCGAAAAAATAAGAGACCATTTCATATGAGTAAAAAA
AGCATACGTTGCAGACGCACGAAAAGACACAGGGATGCGTGAAATATATC
GTGATGAGCGACTGCTTCATATCGGTTATTACCATCGATCACATTGTTGG
ACACAATCACGGATGACTTAGCAGACCGTCTCATCAAGTGTTTCAGTAAA
GATGTCATCAAAACGAAAACCAAAAATGTTTGGTGTTGATGGCATACGCC
CTGTGTTTGATGACATTCTAATTGCCAAGTTGAGACCTGGACACGAAATC
GATCTGAGAATGCATTGTGTCAAAGGAGTTGGTTGTGATCATGCCAAGTT
CAGTCCAGTAGTGACAACGAAAGACATCAAATGGATACCTATAGGTGATC
AGGAGGAACAGAGGAAGAACAACTTCACACAGAACCTGATGTTCATTTGG
TGTTCGAACTGAAAGTGAAATGCACTATGAATCCTGAAGCCCCCAAAGAT
TGTGTCAACCCTGAAATTATGTACTTGAATAATAAAGGTCCTTGCTCACA
GACTTGGACTGATACCAATCTTTGCTGACCCAAGGTTGTTCAACTTCCCT
CCAACTCCAGTAGAAGGCAAAAACTTGACTGGTACCGTCAATGGCCATTG
ATAAAGTTTTTATATTCAACAACTCCTCAATCATTCAGGACGAGAACTTT
CGAGTTGACATAGTTTCACTAAATGAGAAGGAAATGGAATTTGACATGGT
GGGGATTGATGCTTCAATTGCTAATGCCTTTCGTAGGATTCTTATTGCAG
AGACTTCGTCCTCAAGCTTTCCTGGTGGATACCCTGGATATGACGATTCT
TGGAATTTCAATACATTTAAAGAGGGTACCCTTTGTTTTCAGTCATTTGT
TTGGTCATTTTCCGTTGACTTATGTGATCTAAAAATCATGTTTCAGTCGA
ATCTACAGGTGCACTACCCCCTGAACAGCTGGTCGAGGAAGCCATTAAGA
TCTTACACGCCAAATGTCAAATTTACGTCGACAAACTGAATAGTTTATGA
GTGCTAAGGGACAAAGTCAAACTCGAAAAAATAAGAGACCATTTCATATG
AGTAAAAAAAGCATACGTTGCAGACGCACGAAAAGACACAGGGATGCGTG
AAATATATCGTGATGAGCGACTGCTTCATATCGGTTATTACCATCGATCA
CATTGTTGGACACAATCACGGATGACTTAGCAGACCGTCTCATCAAGTGT
TTCAGTAAAGATGTCATCAAAACGAAAACCAAAAATGTTTGGTGTTGATG
GCATACGCCCTGTGTTTGATGACATTCTAATTGCCAAGTTGAGACCTGGA
CACGAAATCGATCTGAGAATGCATTGTGTCAAAGGAGTTGGTTGTGATCA
TGCCAAGTTCAGTCCAGTAGTGACAACGAAAGACATCAAATGGATACCTA
TAGGTGATCAGGAGGAACAGAGGAAGAACAACTTCACACAGAACCTGATG
TTCATTTGGTGTTCGAACTGAAAGTGAAATGCACTATGAATCCTGAAGCC
CCCAAAGATTGTGTCAACCCTGAAATTATGTACTTGAATAATAAAGGTCC
TTGCTCACAGACTTGGACTGATACCAATCTTTGCTGACCCAAGGTTGTTC
AACTTCCCTCCAACTCCAGTAGAAGGCAAAAACTTGACTGGTACCGTCAA
TGGCCATTGATAAAGTTTTTATATTCAACAACTCCTCAATCATTCAGGAC
GAGAACTTTCGAGTTGACATAGTTTCACTAAATGAGAAGGAAATGGAATT
TGACATGGTGGGGATTGATGCTTCAATTGCTAATGCCTTTCGTAGGATTC
TTATTGCAGAGACTTCGTCCTCAAGCTTTCCTGGTGGATACCCTGGATAT
GACGATTCTTGGAATTTCAATACATTTAAAGAGGGTACCCTTTGTTTTCA
GTCATTTGTTTGGTCATTTTCCGTTGACTTATGTGATCTAAAAATCATGT
TTCAGTCGAATCTACAGGTGCACTACCCCCTGAACAGCTGGTCGAGGAAG
CCATTAAGATCTTACACGCCAAATGTCAAATTTACGTCGACAAACTGAAT
AGTTTATGAGTGCTAAGGGACAAAGTCAAACTCGAAAAAATAAGAGACCA
TTTCATATGAGTAAAAAAAGCATACGTTGCAGACGCACGAAAAGACACAG
GGATGCGTGAAATATATCGTGATGAGCGACTGCTTCATATCGGTTATTAC
CATCGATCACATTGTTGGACACAATCACGGATGACTTAGCAGACCGTCTC
ATCAAGTGTTTCAGTAAAGATGTCATCAAAACGAAAACCAAAAATGTTTG
GTGTTGATGGCATACGCCCTGTGTTTGATGACATTCTAATTGCCAAGTTG
AGACCTGGACACGAAATCGATCTGAGAATGCATTGTGTCAAAGGAGTTGG
TTGTGATCATGCCAAGTTCAGTCCAGTAGTGACAACGAAAGACATCAAAT
GGATACCTATAGGTGATCAGGAGGAACAGAGGAAGAACAACTTCACACAG
AACCTGATGTTCATTTGGTGTTCGAACTGAAAGTGAAATGCACTATGAAT
CCTGAAGCCCCCAAAGATTGTGTCAACCCTGAAATTATGTACTTGAATAA
TAAAGGTCCTTGCTCACAGACTTGGACTGATACCAATCTTTGCTGACCCA
AGGTTGTTCAACTTCCCTCCAACTCCAGTAGAAGGCAAAAACTTGACTGG
TACCGTCAATGGCCATTGATAAAGTTTTTATATTCAACAACTCCTCAATC
ATTCAGGACGAGAACTTTCGAGTTGACATAGTTTCACTAAATGAGAAGGA
AATGGAATTTGACATGGTGGGGATTGATGCTTCAATTGCTAATGCCTTTC
GTAGGATTCTTATTGCAGAGACTTCGTCCTCAAGCTTTCCTGGTGGATAC
CCTGGATATGACGATTCTTGGAATTTCAATACATTTAAAGAGGGTACCCT
TTGTTTTCAGTCATTTGTTTGGTCATTTTCCGTTGACTTATGTGATCTAA
AAATCATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006428XLOC_006428Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011470-exon-sc0000128-1575043694:126090..126157TCONS_00011470-exon-sc0000128-1575043694:126090..126157Clytia hemisphaericaexon
TCONS_00011470-exon-sc0000128-1575043694:125529..125600TCONS_00011470-exon-sc0000128-1575043694:125529..125600Clytia hemisphaericaexon
TCONS_00011470-exon-sc0000128-1575043694:125190..125297TCONS_00011470-exon-sc0000128-1575043694:125190..125297Clytia hemisphaericaexon
TCONS_00011470-exon-sc0000128-1575043694:124753..124815TCONS_00011470-exon-sc0000128-1575043694:124753..124815Clytia hemisphaericaexon
TCONS_00011470-exon-sc0000128-1575043694:124283..124376TCONS_00011470-exon-sc0000128-1575043694:124283..124376Clytia hemisphaericaexon
TCONS_00011470-exon-sc0000128-1575043694:123915..124040TCONS_00011470-exon-sc0000128-1575043694:123915..124040Clytia hemisphaericaexon
TCONS_00011470-exon-sc0000128-1575043694:123643..123692TCONS_00011470-exon-sc0000128-1575043694:123643..123692Clytia hemisphaericaexon
TCONS_00011470-exon-sc0000128-1575043694:122810..122942TCONS_00011470-exon-sc0000128-1575043694:122810..122942Clytia hemisphaericaexon
TCONS_00011470-exon-sc0000128-1575043694:122204..122323TCONS_00011470-exon-sc0000128-1575043694:122204..122323Clytia hemisphaericaexon
TCONS_00011470-exon-sc0000128-1575043694:121848..121915TCONS_00011470-exon-sc0000128-1575043694:121848..121915Clytia hemisphaericaexon
TCONS_00011470-exon-sc0000128-1575043694:121574..121622TCONS_00011470-exon-sc0000128-1575043694:121574..121622Clytia hemisphaericaexon
TCONS_00011470-exon-sc0000128-1575043694:120715..121229TCONS_00011470-exon-sc0000128-1575043694:120715..121229Clytia hemisphaericaexon
TCONS_00011470-exon-sc0000128-1510915933:126090..126157TCONS_00011470-exon-sc0000128-1510915933:126090..126157Clytia hemisphaericaexon
TCONS_00011470-exon-sc0000128-1510915933:125529..125600TCONS_00011470-exon-sc0000128-1510915933:125529..125600Clytia hemisphaericaexon
TCONS_00011470-exon-sc0000128-1510915933:125190..125297TCONS_00011470-exon-sc0000128-1510915933:125190..125297Clytia hemisphaericaexon
TCONS_00011470-exon-sc0000128-1510915933:124753..124815TCONS_00011470-exon-sc0000128-1510915933:124753..124815Clytia hemisphaericaexon
TCONS_00011470-exon-sc0000128-1510915933:124283..124376TCONS_00011470-exon-sc0000128-1510915933:124283..124376Clytia hemisphaericaexon
TCONS_00011470-exon-sc0000128-1510915933:123915..124040TCONS_00011470-exon-sc0000128-1510915933:123915..124040Clytia hemisphaericaexon
TCONS_00011470-exon-sc0000128-1510915933:123643..123692TCONS_00011470-exon-sc0000128-1510915933:123643..123692Clytia hemisphaericaexon
TCONS_00011470-exon-sc0000128-1510915933:122810..122942TCONS_00011470-exon-sc0000128-1510915933:122810..122942Clytia hemisphaericaexon
TCONS_00011470-exon-sc0000128-1510915933:122204..122323TCONS_00011470-exon-sc0000128-1510915933:122204..122323Clytia hemisphaericaexon
TCONS_00011470-exon-sc0000128-1510915933:121848..121915TCONS_00011470-exon-sc0000128-1510915933:121848..121915Clytia hemisphaericaexon
TCONS_00011470-exon-sc0000128-1510915933:121574..121622TCONS_00011470-exon-sc0000128-1510915933:121574..121622Clytia hemisphaericaexon
TCONS_00011470-exon-sc0000128-1510915933:120715..121229TCONS_00011470-exon-sc0000128-1510915933:120715..121229Clytia hemisphaericaexon
TCONS_00011470-exon-sc0000128-1491911889:126090..126157TCONS_00011470-exon-sc0000128-1491911889:126090..126157Clytia hemisphaericaexon
TCONS_00011470-exon-sc0000128-1491911889:125529..125600TCONS_00011470-exon-sc0000128-1491911889:125529..125600Clytia hemisphaericaexon
TCONS_00011470-exon-sc0000128-1491911889:125190..125297TCONS_00011470-exon-sc0000128-1491911889:125190..125297Clytia hemisphaericaexon
TCONS_00011470-exon-sc0000128-1491911889:124753..124815TCONS_00011470-exon-sc0000128-1491911889:124753..124815Clytia hemisphaericaexon
TCONS_00011470-exon-sc0000128-1491911889:124283..124376TCONS_00011470-exon-sc0000128-1491911889:124283..124376Clytia hemisphaericaexon
TCONS_00011470-exon-sc0000128-1491911889:123915..124040TCONS_00011470-exon-sc0000128-1491911889:123915..124040Clytia hemisphaericaexon
TCONS_00011470-exon-sc0000128-1491911889:123643..123692TCONS_00011470-exon-sc0000128-1491911889:123643..123692Clytia hemisphaericaexon
TCONS_00011470-exon-sc0000128-1491911889:122810..122942TCONS_00011470-exon-sc0000128-1491911889:122810..122942Clytia hemisphaericaexon
TCONS_00011470-exon-sc0000128-1491911889:122204..122323TCONS_00011470-exon-sc0000128-1491911889:122204..122323Clytia hemisphaericaexon
TCONS_00011470-exon-sc0000128-1491911889:121848..121915TCONS_00011470-exon-sc0000128-1491911889:121848..121915Clytia hemisphaericaexon
TCONS_00011470-exon-sc0000128-1491911889:121574..121622TCONS_00011470-exon-sc0000128-1491911889:121574..121622Clytia hemisphaericaexon
TCONS_00011470-exon-sc0000128-1491911889:120715..121229TCONS_00011470-exon-sc0000128-1491911889:120715..121229Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011470-proteinTCONS_00011470-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000128supercontigsc0000128:120715..126157 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.445	1.64144	0	1.08805	8.47804	10.5293	14.0377	13.3718	2.26252	5.93186	5.87224	1.33294e-05	1.64781	4.84932	1.03487	2.64332	6.13462	4.97128	0	1.25708	1.22198	0	1.58143	1.23197	1.04385	5.39833	0.191051	0	3.06873e-05	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR011263DNA-dir_RNA_pol_RpoA/D/Rpb3
IPR011262DNA-dir_RNA_pol_insert
IPR001514DNA-dir_RNA_pol_30-40kDasu_CS
IPR033901RNAPI/II_AC40
IPR009025RBP11-like_dimer
Vocabulary: Molecular Function
TermDefinition
GO:0003899DNA-directed 5'-3' RNA polymerase activity
GO:0046983protein dimerization activity
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006351 transcription, DNA-templated
molecular_function GO:0003677 DNA binding
molecular_function GO:0003899 DNA-directed 5'-3' RNA polymerase activity
molecular_function GO:0046983 protein dimerization activity
Blast
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BLAST of TCONS_00011470 vs. Swiss-Prot (Human)
Match: RPAC1 (DNA-directed RNA polymerases I and III subunit RPAC1 OS=Homo sapiens GN=POLR1C PE=1 SV=1)

HSP 1 Score: 365.155 bits (936), Expect = 2.882e-122
Identity = 189/325 (58.15%), Postives = 248/325 (76.31%), Query Frame = 3 
Query:   84 FPGGYPGYDDSWNFNTFKENFRVDIVSLNEKEMEFDMVGIDASIANAFRRILIAEVPSMAIDKVFIFNNSSIIQDEVLAHRLGLIPIFADPRLFNFPPTPVEGKNLTEEEQLHTEPDVHLVFELKVKCTMNPEAPKDCVNPEIMYLNNKVTTKDIKWIPIGDQEEQFGVDGIRPVFDDILIAKLRPGHEIDLRMHCVKGVGCDHAKFSPVATASYRXXXXXXXXXXXXXXXXXXXXKCFSKDVIKTKTKNGVKKAYVADARKDTGMREIYRDEVLRDKVKLEKIRDHFIFSVESTGALPPEQLVEEAIKILHAKCQIYVDKLNSL 1058
            FPG Y GYDD+W+ + F++NFRVD+V ++E  +EFDMVGIDA+IANAFRRIL+AEVP+MA++KV ++NN+SI+QDE+LAHRLGLIPI ADPRLF +       +N  +EE   TE D  L F L+V+CT NP A KD  +P  +Y+N+KV T+ + WIP+G+Q + F    IRPV DDILIA+LRPG EIDL MHCVKG+G DHAKFSPVATASYRLLP ITLL+ +  + A+ L +CFS  VI+ +   G K A VA+ R DT  REI+R+E L+  V+L ++RDH+IFSVESTG LPP+ LV EAIK+L  KC+ ++D+L+++
Sbjct:   29 FPGNYSGYDDAWDQDRFEKNFRVDVVHMDENSLEFDMVGIDAAIANAFRRILLAEVPTMAVEKVLVYNNTSIVQDEILAHRLGLIPIHADPRLFEY-------RNQGDEEG--TEIDT-LQFRLQVRCTRNPHAAKDSSDPNELYVNHKVYTRHMTWIPLGNQADLFPEGTIRPVHDDILIAQLRPGQEIDLLMHCVKGIGKDHAKFSPVATASYRLLPDITLLEPVEGEAAEELSRCFSPGVIEVQEVQGKKVARVANPRLDTFSREIFRNEKLKKVVRLARVRDHYIFSVESTGVLPPDVLVSEAIKVLMGKCRRFLDELDAV 343
The following BLAST results are available for this feature:
BLAST of TCONS_00011470 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RPAC12.882e-12258.15DNA-directed RNA polymerases I and III subunit RPA... [more]
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