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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00011482 ID=TCONS_00011482|Name=TCONS_00011482|organism=Clytia hemisphaerica|type=transcript|length=473bp
TTTCAGCGGGCGGATATGAAGTTTATACAATATTTAGTTTTGGTTTTCTG
TATGTGTTACACCACTACTTTCGATTTGACTGGAAAAACAGttcaacTTG
ATGTCCAAGATGGTAAGGAAGGGATTGTGGGAAATGACTTCATCACCAGC
TTTTTCACAGATTCACCACATAGTTTTATGAGAGTACAATTCTTCTTCAA
AGAACCTCTTCATCCGATCAACGTTTTTCGTTTGGAAACTACCAACACTG
ATGGGGAACCAGTATCGTTATCTCTAAAGATTTTGGATGATTTGGTGGTT
TTGGAAGCGAGAGCGAGTTCTACCAAGACTTCTAATCAAATATTGGGAAG
TTGAGGGGACCAAtcttttagttcgaattacagaaagatgcgaggttcga
attagagagtgttgACTGTATTACTCGGATGTGATGCAATCTATCGTGAG
CGCTGTCGTCAACAAACAAGCTA Run BLAST on NCBI transcript from alignment at sc0000128:217147..219752- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00011482 ID=TCONS_00011482|Name=TCONS_00011482|organism=Clytia hemisphaerica|type=transcript|length=2606bp|location=Sequence derived from alignment at sc0000128:217147..219752- (Clytia hemisphaerica)
TTTCAGCGGGCGGATATGAAGTTTATACAATATTTAGTTTTGGTTTTCTG
TATGTGTTACACCACTACTTTCGATTTGACTGGAAAAACAGGTATATTGA
TTTTACCATTTATTGACTTTTTCTTCTTCTTGCGCTTAGACAGCAAAATG
TCACTAAAAAGAGAAAACGGAGGTTAGGTCAGGGCAGAGTAAGCAGTTGC
GGAGATGTTTACAGTGTTTGTTCCAAACTCTACCGCTGCTTTCTTTCCGT
CTACCTCCCGCTACGGCTGTAAACTCCGTGCATATATATTTTTCCACTTT
ACTATCTCTCTAACGGACGATAATTTAGTTCTCGAGTTGCAGAGTTAAGA
AACTTTCGATACTTGACGACAAAGAACGGGGTTATTTCAGCCTTTGTTAG
CGCCAAGGCACTTTTCTACAGGGCTAAGTCTAATGCAAGGTGGACATGTC
CTGCAAAAAGTATCACAAGCACAAAAAAAAGAAGTAAAGATGACACTTTT
TGAACCAAGAAAAATCTCATTACAGTGGTGTCTCTATAACTCGAGCACGT
TCAGGAAACTTAAATTTGTTCGAGTTATGGAGATTGATTTTGAAGGCATT
GTTCATTGAAGGGACGATTAAACTTGTTCGGAGATGTTTGGGTAATAGAG
GTTCGAGTTCTAGAGATTCAACTGTAATCGAAGAATACGACGCCTGTGCT
TATTTTCCTCCTTCGATAAAAAGCAAAAAGGATCCTGCTCTTTAAACAAT
TCTCCAAGAATCCCCCTGTAGTATCATAAAATAGATATGTCTTATCCGGG
AAAAAGGTTGGAATTTATTTTATAAAGGTGTCTGGATTTTGCAATGACAT
AGGTGTCTTTTTCATAAAAGACTGGAACAGGGTATCATAACCAACTCTTC
CTATTTTTTTTTTTAGTTCAACTTGATGTCCAAGATGGTAAGGAAGGGAT
TGTGGGAAATGACTTCATCACCAGCTTTTTCACAGATTCACCACATAGTT
TTATGAGAGTACAATTCTTCTTCAAAGAACCTCTTCATCCGATCAACGTT
TTTCGTTTGGAAACTACCAACACTGATGGTGAGTTTGCCTAGAAGACTTT
TCCATTTATATCAGACCATGCTCGAACGTGACGGTTCCGTTTCGCTCCAA
AACGAAATGAAGCCATTATATTAGTTAGAAGTGACGCTGACACTTAAATG
TAACCAATAGAACGGCTTCATTTCGTCTAGGAGCGAAACGGAACCGTCAC
GTTCGAACATGGTCTCAATATACGTATCAACCATCAACCTTTAGATCACG
ATCACATACTACGGTTCCGTTTCCCTCCGAAACAAAATGAAGCCATTCTG
TTGGTTAAATTCAATATTTACATCACTTCTAACCAATAGAATGGCTTCAT
TTTGTTTCGGAGTGAAACGGAACCGTTACGTGAGACAACATGATCTCAAA
ACGTGAGGAGGCTGGGCTCGATTTTACCATGAGGAATGACATCAAAATGT
CTGAAACCATTACCTTGGCATGCCCAAAGATAAACAATTTAAATTCAATT
TCTTGTAAATTCACTACCAGTCACCTTATATCTGGCATATAGAGGTAGCT
GTTAAAATATCTATTTGGGGAATTCGCCTCCCTAATTTACCCCAATTTTG
GTCGACCCACCATGCTTCGAAGACTACTGAATCATCCATCTATATAAGGG
TTATGTACGTGACATCTAGTAAACCGCAACTCGCTTTTCAAAACCAATCT
TCTCAATAAGTTCTTATAGCTTTGGTTAAATGATGTCTTTACTGTCACAC
TTTCTGGTCATATTTGATCCTTTAAGTAATCAGTAATCGAAATCTTTTTA
TCTGAAATTGTTATACTACTCTTCTCGTTTGTATATTTGCCAAGTTTTCG
AGTCTTTTCTTTGGCTAGATCGAAAGTTATGGACTGATGTTACCGACATG
AAAACGGATTCTATAATAGTTCTCTACCCGAGCCATTTAGGACCCCCTAC
TCGCGACCCTCTGGAGACCAAAAGCCCCCTTAAAACAATATTTACCTCTT
TAATCCATAAACACGAAAATTGTTTGATAATACGGATTTTCCAGAGGGAT
GCTGAAAAGACGTGCTCTAAGATTCTTCAGGTCCTGATCTCCTTATACGT
TTTCAAAGAGCCTGAAGCTAATTTACATTTGAATAAAATTTTTCAGGGGA
ACCAGTATCGTTATCTCTAAAGATTTTGGATGATTTGGTGGTTTTGGAAG
CGAGAGCGAGTTCTACCAAGACTTCTAATCAAATATTGGGAAGTAAGTAT
CTTTCAAAATCTTGTGAGATTCCGAAATGCGTCTCATTTTGCGCGATCAT
TGACAAGGAAATACTTCGTCCAAGACAATCATTAGTTTAGAGGATCGCAA
TCTAGAATCCAGGGTCATTTGCATCGCTTTGAGACCAAGAATTCTCTTCC
AATTACGAAAAGTTTTTTATTTGACTTTCCAGGTTGAGGGGACCAATCTT
TTAGTTCGAATTACAGAAAGATGCGAGGTTCGAATTAGAGAGTGTTGACT
GTATTACTCGGATGTGATGCAATCTATCGTGAGCGCTGTCGTCAACAAAC
AAGCTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00011482-exon-sc0000128-1575043694:219662..219752 | TCONS_00011482-exon-sc0000128-1575043694:219662..219752 | Clytia hemisphaerica | exon |
| TCONS_00011482-exon-sc0000128-1575043694:218675..218836 | TCONS_00011482-exon-sc0000128-1575043694:218675..218836 | Clytia hemisphaerica | exon |
| TCONS_00011482-exon-sc0000128-1575043694:217461..217556 | TCONS_00011482-exon-sc0000128-1575043694:217461..217556 | Clytia hemisphaerica | exon |
| TCONS_00011482-exon-sc0000128-1575043694:217147..217270 | TCONS_00011482-exon-sc0000128-1575043694:217147..217270 | Clytia hemisphaerica | exon |
| TCONS_00011482-exon-sc0000128-1510915933:219662..219752 | TCONS_00011482-exon-sc0000128-1510915933:219662..219752 | Clytia hemisphaerica | exon |
| TCONS_00011482-exon-sc0000128-1510915933:218675..218836 | TCONS_00011482-exon-sc0000128-1510915933:218675..218836 | Clytia hemisphaerica | exon |
| TCONS_00011482-exon-sc0000128-1510915933:217461..217556 | TCONS_00011482-exon-sc0000128-1510915933:217461..217556 | Clytia hemisphaerica | exon |
| TCONS_00011482-exon-sc0000128-1510915933:217147..217270 | TCONS_00011482-exon-sc0000128-1510915933:217147..217270 | Clytia hemisphaerica | exon |
| TCONS_00011482-exon-sc0000128-1491911889:219662..219752 | TCONS_00011482-exon-sc0000128-1491911889:219662..219752 | Clytia hemisphaerica | exon |
| TCONS_00011482-exon-sc0000128-1491911889:218675..218836 | TCONS_00011482-exon-sc0000128-1491911889:218675..218836 | Clytia hemisphaerica | exon |
| TCONS_00011482-exon-sc0000128-1491911889:217461..217556 | TCONS_00011482-exon-sc0000128-1491911889:217461..217556 | Clytia hemisphaerica | exon |
| TCONS_00011482-exon-sc0000128-1491911889:217147..217270 | TCONS_00011482-exon-sc0000128-1491911889:217147..217270 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000128 | supercontig | sc0000128:217147..219752 - |
Blast
The following BLAST results are available for this feature:
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