TCONS_00011489 (transcript) - C. hemisphaerica

Overview
NameTCONS_00011489
Unique NameTCONS_00011489
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2089

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00011489 ID=TCONS_00011489|Name=TCONS_00011489|organism=Clytia hemisphaerica|type=transcript|length=2089bp
CTTTTGGTATTAAAACGAATCGAAAAACAGTAACCAGAAGTATTGTGTCA
AcggaaaaatataacattttgtaaatttgaaatattttcaaggtAAAACT
GTGTTGCTATTTAAATGAAAATGCGTCAGTTTTTATTGATATTATCATCA
TGTCTCTATCTCTCACTGGGAGTCGTTGACTGCAAGGCAAGAGAACTAAA
ACATGTGGCCTGGTCAACATCGGGGACCTGTACAGCATCTTATGTTCCAG
GAGGGAAAGTCACTATTCAAAAGAGTACAGCACCAACGGCAACCTTACAA
ACAACAGCCGTGCAAAATTTCTTCACTCATTCTGACTTTGGGATCACCCT
TGGAACTGCAGATACAGCAGGACAAGTTTTGAGTTACGTTGGAGAATTGA
GTAAGAAATTTGTCAATACAGCTAAACACTTGGCACCGGCCATCGGCATA
ATCGGTAGTGTACTAGGTACGATCACAGGAGACAAGACACCAACAGCTGA
CGACAtcttaaaaacaacaaacaaggCTTTTGAAAAGATGACAGAGGAGT
TGGACAGTTGAATTGAAGAAATGAAGGATTACGTCGATACTGAGATTATT
CGTCTCTTAAAAGATATCAAccatcaaaaatacaaatttttatattcttA
CTGGACTGGTTGCATTGAAGGACCAGCAAATGAAACAGAGCTATGTCAGC
GAGAAGCTAACCGTCTTATTCAAGCATCAGTAAACGAATTTGCGATGTAT
TCTGACCAGTTTGATCGTAATACACTGAAGTTTAACCCACTGTTAACAGG
AGATCAAATCAAGAGAGTTGAAGTGAATTTGATTTTGTTTAGaaactATG
TGTTTCTCAGTGTTATGGCTATGAAGACCATCACCTCGACGTACAAAGAC
CAACAGGAAAAAGCATACGTTGACCTTTACGAGAACCAACTTCAGAAGAA
TGTCAAATTCTACAATGATTACGCAAAAGCATCTGTTGATTTGGTCAAAC
AAATTAATCTGAACTACACATCAAATTATTTCAGCTCTAAATATGAACAG
GAAATGAGAGATCATGAGAAGAAGGTTCCAGATGGAACATTGCTACCTGA
ACCTGACTACCTTATTACTACCTTCGTTGAAACGGAGATTAAATGCAAAT
TACAAATGAATTCAAGATTTACTGATTATTGTAAAGCTGACGTGAGTGTA
ATGTTGTGCAAGAAAGGAAGCAAGCTTTATGTCAATTGTAAAAAAGGAGA
CCGTATTCCTGACAACTGGCGATACAAAAAGTCTTACTCCCATTATCCCG
TATGGAGTAAGTATGATGTTTCGCACACACCAGCTTTCTTGGCACGAGCC
ATCTGCAGATCAGAGTTGAATACCAAattgaaagatttcaaaagcTCTTA
CGCTCTTTCAATCAAACGTTACTGGGAAAATGAAGTTGGAAAATTGTTAT
CCTGTGCAAAGAAGTTGATTGATTCCAAGAATCTGGATAATGCAAGAGAG
ACAGGCGGATGGAAATGTTGAGAAGCAAGCCACATCATCGAGTTCTCAAA
AATGAACAGGAATGGGACTTTTCCAACAAATCCTTTATAGACATTGCTAG
CCATAATTTACAACAATGAAccgtaatttaaaaaaaatgtataacaggAA
AATGTTCATGGTATAATTTNATGAAccgtaatttaaaaaaaatgtataac
aggAAAATCTTCATGGTATAATTgtgaacatttttataaaattaataaaa
tttgcaaaagtcgTTTTGATTCATACTAAATGAAGTCCAGGTCCATAACA
ATTCTAAAGAGGCCTAAGTTCAAATCTCTCCCTATTCTAAAGCGGCTTAA
ATCCAGGTCTCCCCAATAAGTAAGtccattttttatgaaaattgggATAT
TTTGTTGTCCTGGACATTTCTGGATCATTGTAGCTTTCTTTAGATGTGAC
CATTTATAGGTCAGAAAGGCTCAAAATCTGAAGCTTTGAAGTTtgataaa
aatgttgaattttaaaaagaataagTCCATCAATTTGATATCAAGTTAAG
GGGCCTAAGTTCATTATTATTTTTCGACATAAGTTTATC
Run BLAST on NCBI

protein sequence of TCONS_00011489-protein

>TCONS_00011489-protein ID=TCONS_00011489-protein|Name=TCONS_00011489-protein|organism=Clytia hemisphaerica|type=polypeptide|length=316bp
MKDYVDTEIIRLLKDINHQKYKFLYSYWTGCIEGPANETELCQREANRLI
QASVNEFAMYSDQFDRNTLKFNPLLTGDQIKRVEVNLILFRNYVFLSVMA
MKTITSTYKDQQEKAYVDLYENQLQKNVKFYNDYAKASVDLVKQINLNYT
SNYFSSKYEQEMRDHEKKVPDGTLLPEPDYLITTFVETEIKCKLQMNSRF
TDYCKADVSVMLCKKGSKLYVNCKKGDRIPDNWRYKKSYSHYPVWSKYDV
SHTPAFLARAICRSELNTKLKDFKSSYALSIKRYWENEVGKLLSCAKKLI
DSKNLDNARETGGWKC
Run BLAST on NCBI

transcript from alignment at sc0000128:255668..263953-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00011489 ID=TCONS_00011489|Name=TCONS_00011489|organism=Clytia hemisphaerica|type=transcript|length=8286bp|location=Sequence derived from alignment at sc0000128:255668..263953- (Clytia hemisphaerica)
CTTTTGGTATTAAAACGAATCGAAAAACAGTAACCAGAAGTATTGTGTCA
ACGGAAAAATATAACATTTTGTAAATTTGAAATATTTTCAAGGTAAAACT
GTGTTGCTATTTAAATGAAAATGCGTCAGTTTTTATTGATATTATCATCA
TGTCTCTATCTCTCACTGGGAGTCGTTGACTGCAAGGCAAGAGAACTAAA
ACATGTGGCCTGGTCAACATCGGGGACCTGTACAGCATCTTATGTTCCAG
GAGGGAAAGTCACTATTCAAAAGAGTACAGCACCAACGGCAACCTTACAA
ACAACAGCCGTGCAAAATTTCTTCACTCATTCTGACTTTGGGATCACCCT
TGGAACTGCAGATACAGCAGGACAAGTTTTGAGTAAGTCAATTTCAAAAT
TTATATCACAGAAATTCAAAAGTCGAAAGGGTCTTTTATTTTAAAGGCCG
CTACCCACTCAGCATTTTATGGTCGGCGAACAAGGCGCACGGCTCGAGCG
CTTTGGTCGCTGAACGCTTTTCCCATTCCACTGATCCAAAATAAAGGGGA
GATATGCTGCACATTTTTTCTTTTTGCTATTGTTGATATCTTTTTGCACA
CGGTACAAGAGAGTTAAATGTCTCTTCTGATTGGCTATTTAAAAAAGAAC
AATAGGGAAGCCGCACAGCCTAGCGAAAAAAGTTGAAAAGTTTCAAGGGT
AGCGACCTTTTGGCTCAAGGCGACAGCCTTTGAAGGCTTGATTTATGCAT
GGATTTATCATAGAACTCTGAATACACAAAGAGCTGGTTTTTCATCGATT
TCTCATGTTTTAGCCTTGTCCGCAGTAATGACATTATTGTTCACCCTCCA
CCATTCACTAATCATTATTTCGTAAATTTTTTTATTGCATTTTTCATCAA
AAAATTTTTCATCACAGCTATACAATTCCCAAATGAGACTTAAAGATCTC
TCAAGAGAGTCAAATGCATCAAATTAATTGCTAATAATATGTCGTTATGA
CGTTTCAAGCTATGAGAAAGATGCGACAAACATGCTATGTATAAGAAATT
GAATGTTGACACCAGAAAATTTCAAACTTCCACGTCGCCAAAACCACCGT
GCCACTGCGTGCCTCCAAAAGCTTTTCATATCACTATGAAGCCAAGATAC
TCTAGTCTAACATATGTCAATCCTAGCTCTTTCCAGGAAAAAATTGGAAA
GTTATTGCCAACCTTATTTTCAGCGTCNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNCCCCCCCCCCAAGGTAGCAAGAGCACTTCCTCA
ATAGGTATCTAACCGGGGGCATTCATGCCGTCCTTAATGGTAGGTTTATC
GAGACCCTGGAAATGCACTGTAAGGGTGTGTTTGGGGACTGATAAATTAC
AAATCTGGCAGTCAAAATCTCATGTATCTTTATAGTTTTGATTTGCACCC
ATTTTGAATTGTTTTACATTATGTCAACATCTCAGGCTCATTTTTGGACG
GCTTCGACAAAATAAGATTTGAAATCAAACTACACTATAAGGGTCAGAAA
CGTTCGGTAAAATGCACTGTAAGGGTAAAATGCACTGTAAGGGTACCTTT
TCACTGCTCAAGAGCTGCACTGTAGGGGTCTGATTTTGAAAGCCATTTTT
TGGCGGCACACACCGTTGTTTAGAAATCGACCCCCGGGGTATCCTCCCTT
AAGAAGTTTAGTCCAATAAAAGATGAAAGCAAGTCCGAGGAAATTCATCA
AGCCAAGATATTCAAAGCAAAAGATAAAATTTTGATTTAAAAACAGCTAT
ATTTCGTATAGTATCATATACATCATTCAGGCAAATGATTTCTGTAAAAG
AAATTTTAGTTTAGTCCGACCCTCTTAATGCAATGACTTTGACCCAACAT
TGCAAAGGCAACTTTGTAGCGCCGCAGGCAAACTTTTTCAAAAAAAGCTA
CCTTTACGTAGGAAGACCCCACTCTAACTGGCAACCCCCCTTTGGAAATT
CAAGCTTTTAATAACACTCCCCCTTGTCTTAGTCAGGTAGAATTAGGTCA
TAAACCACCAAAACCGGGACAAAAATGGTGTAGAGATGAAATTTTGCACA
GTGGTCCAGGAACATGTCAGGAATCACCAAAAAAAAAGTCCCACCCCAAA
GAAGATGGAAACACCCTCAAATCCATAATGGCGGACATGGTACTTTTATC
TACAATTAATCAAGGGGGACCCTTGATAACTGAATTTTAATAGTTTTCAA
ATGTCAAAAATAACTAGACAGGGAGATTCCTCTCGACGAGCAGATAAAGA
AAATGGGGTCACTTTTGAAATTTGGACCACGTGGTCCCGAGATATGACCT
CTCAAGTCAAAAAAAAGACGATTTTGATGACGTCAGCATTTTTACTGAGA
TGGATAAATTGGAATGCCAATGATTTAATCACGTAGCCCTGATCATGGGC
TTTCAGAAAATTACATGGTTAAGTATGTTTAAACCAACCGTTGGCGAGAT
ATAACGATTTTAAAATCGAAAAAAAGTGCTGACTCAGCAAAAATAAGCGT
TTTAAACAATTTTAAAATCGTCATATCTCGCCAACGGCTGATCTAAACAT
ATTAAACTATATATTTTTCTGAAAGCCCATGACCAGGGCTACANCTCGCC
AACGGCTGATCTAAACATATTAAACCATATATTTTTCTGAAAGCCAATGA
CCAGGGCTACGTGATGAGCTTGTCGATGTTCCAATTTATCGCTCTCAGTA
AAAATGCTGACGTCATCAAAATCATCACTTTTTTGACTTTAGAGGTCATA
TCTCGGGACCACGTGGTCCAAATTTCAAAAGTGAATCCATTTTCTTTATC
TACTCATCGAGAGGAATCTCCCACTGTCTAGTTATTTTTGACATTTGAAA
ACCATTAAAATTCAGTTATCAATTATTGATTAACTGTAGAAAAAAGTACC
GCCATTATGGATTTGAGGGTGTTCCCATCTTCCTGGGGGTAGGCCTTTTT
TTTTGGTTATTCCTAACATGTTCCTGGACCTCTGTGTAAAATTTCATCTC
TACACTATGCAATTCTACCTGACTATCTGGGTTTCATCAAAATCTGAAAC
TATGAAACTACGATGGAATGTCTTCAAGGATGATAAAATGCTGAGTGGGT
TTTACTGAGTTTTACCAAGTCTAAAACTAAATACCTTATCGGGGAAAATA
ATGTCGGGAGAAAGTGACGAAAATTTTGAGGGGGTGACGAAATATTTCCC
CGACATTTTATCCCCTGACCAAAACTTGTGCCCGATTTTTTTATCCCTGA
CCTCGGAATTTCATACCGCAAGCAAAATTCAAATCTAATTTTTTTACACC
TTTATTTAACCGAAATTAGTGCTTTAAACGTCGAATTACAAGATCCATTT
TCGAGCTAGTGAGGGAAACCATTTCTTTTGGACAGTTTAGTCGGGTGAAA
GTGATGAATTTGAAATTTTTGTCGGAGAAAAGTGACGAATTTGAAATTTT
GGTCGGGGAGAAAGTGACGAAAATGCCTCTAGGTGACGAAATTTTTCCCA
ACGAAAAAAAAAACCCGACTAAATAAAACTCCGACATTTTTTCCCCCGAT
AAGGTCTTACCATACCAGTTATAATTGGTGAATGCTAAACATAGTATTAT
TCGATGATGAGATAAATTCTGTATGCAAGGTTTCAACGGAAAGAAACATT
TGGGAAAGATTTTGAAGTTCGTTTTGGCAGCATTTTAAGGGTTTACTACT
GTATATTGTAATTGTTTCGGACATTTTAGGTTACGTTGGAGAATTGAGTA
AGAAATTTGTCAATACAGCTAAACACTTGGCACCGGCCATCGGCATAATC
GGTAGTGTACTAGGTACGATCACAGGAGACAAGACACCAACAGCTGACGA
CATCTTAAAAACAACAAACAAGGCTTTTGAAAAGATGACAGAGGAGTTGG
ACAGTTGAATTGAAGAAATGAAGGATTACGTCGATACTGAGATTATTCGT
CTCTTAAAAGATATCAACCATCAAAAATACAAATTTTTATATTCTTACTG
GACTGGTTGCATTGAAGGACCAGCAAATGAAACAGAGCTATGTCAGCGAG
AAGCTAACCGTCTTATTCAAGCATCAGTAAACGAATTTGCGATGTATTCT
GACCAGTTTGATCGTAATACACTGAAGTTTAACCCACTGTTAACAGGAGA
TCAAATCAAGAGAGTTGAAGTGAATTTGATTTTGTTTAGGTAAGAACAGA
TAAAGGAACTGAACACATGTTGTCTAATTTAAGTGACTTTGTTTGCTTTT
TCAAACAGGTTCAAAACAACGTTTCTAAAATAATCAAAATGATAGCTCCC
ACATAAAGATTTTCCGATGTTAGGTACAGTTAATTTGAAATCGACATTTG
AAAATCGTTAATTTACTCCCTTGCGGTTTCGTCTGTTTTACCATTTCTAA
CTCCTGTAAGATATATATTAGTTNGTGTACTAGGTACGATCACAGGAGAC
AAGACACCAACAGCTGACGACATCTTAAAAACAACAAACAAGGCTTTTGA
AAAGATGACAGAGGAGCTGGACAGTCGAATTGAAGAAATGAAGGATTACG
TCGATACTGAGATTATTCGTCTCTTAAAAGATATCAACCATCAAAAATAC
AAATTTTTATATTCTTACTGGACTGGTTGCATTGAAGGACCAGCAAATGA
AACAGAGCTATGTCAGCGAGAAGCTAACCGTCTTATTCAAGCATCAGTCA
ACGAATTTGCGATGTATTCTGACCAGTTTGATCGTAATACACTGAAGTTT
AACCCACTGTTAACAGGAGATCAAATCAAGAGAGTTGAAGTGAATTTGAT
TTTGTTTAGGTAAGAACAGATAAAGGAACTGAACACATGTTGTCTAATTT
AAGTGACTTTGTTTGCTTTTTCAAACAGGTTCAAAACAACGTTTCTAAAA
TAATCAAAATGATAGCTCCCACATAAAGATTTTCCGATGTTAGGTACAGT
TAATTTGAAATCGACATTTGAAAATCGTTAATTTACTCCCTTGCGGTTTC
GTCTGTTTTACCTTTTCTAACTCCTGTAAGATATATATTAGTTTTTTTCT
AATAATCCAAAAAAATATCTAACGCTTGGTGTGATGTCAGCGGAACCTAG
AAATCAAAACTGTACAGTGTTGTTGTTTTTTTTCTTTAGAAACTATGTGT
TTCTCAGTGTTATGGCTATGAAGACCATCACCTCGACGTACAAAGACCAA
CAGGAAAAAGCATACGTTGACCTTTACGAGAACCAACTTCAGAAGAATGT
CAAATTCTACAATGATTACGCAAAAGCATCTGTTGATTTGGTCAAACAAA
TTAATCTGAACTACACATCAAATTATTTCAGCTCTAAATATGAACAGGAA
ATGAGAGATCATGAGAAGAAGGTTCCAGATGGAACATTGCTACCTGAACC
TGACTACCTTATTACTACCTTCGTTGAAACGGAGATTAAATGCAAATTAC
AAATGAATTCAAGATTTACTGATTATTGTAAAGCTGACGTGAGTGTAATG
TTGTGCAAGAAAGGAAGCAAGCTTTATGTCAATTGTAAAAAAGGAGACCG
TATTCCTGACAACTGGCGATACAAAAAGTCTTACTCCCATTATCCCGTAT
GGAGTAAGTATGATGTTTCGCACACACCAGCTTTCTTGGCACGAGCCATC
TGCAGATCAGAGTTGAATACCAAATTGAAAGATTTCAAAAGCTCTTACGC
TCTTTCAATCAAACGTTACTGGGAAAATGAAGTTGGAAAATTGTTATCCT
GTGCAAAGAAGTTGATTGATTCCAAGAATCTGGATAATGCAAGAGAGACA
GGCGGATGGAAATGTTGAGAAGCAAGCCACATCATCGAGTTCTCAAAAAT
GAACAGGAATGGGACTTTTCCAACAAATCCTTTATAGACATTGCTAGCCA
TAATTTACAACAATGAACCGTAATTTAAAAAAAATGTATAACAGGAAAAT
GTTCATGGTATAATTTNATGAACCGTAATTTAAAAAAAATGTATAACAGG
AAAATCTTCATGGTATAATTGTGAACATTTTTATAAAATTAATAAAATTT
GCAAAAGTCGTTTTGATTCATACTAAATGAAGTCCAGGTCCATAACAATT
CTAAAGAGGCCTAAGTTCAAATCTCTCCCTATTCTAAAGCGGCTTAAATC
CAGGTCTCCCCAATAAGTAAGTCCATTTTTTATGAAAATTGGGATATTTT
GTTGTCCTGGACATTTCTGGATCATTGTAGCTTTCTTTAGATGTGACCAT
TTATAGGTCAGAAAGGCTCAAAATCTGAAGCTTTGAAGTTTGATAAAAAT
GTTGAATTTTAAAAAGAATAAGTCCATCAATTTGATATCAAGTTAAGGGG
CCTAAGTTCATTATTATTTTTCGACATAAGTTTATC

Coding sequence (CDS) from alignment at sc0000128:255668..263953-

>TCONS_00011489 ID=TCONS_00011489|Name=TCONS_00011489|organism=Clytia hemisphaerica|type=CDS|length=951bp|location=Sequence derived from alignment at sc0000128:255668..263953- (Clytia hemisphaerica)
ATGAAGGATTACGTCGATACTGAGATTATTCGTCTCTTAAAAGATATCAA
CCATCAAAAATACAAATTTTTATATTCTTACTGGACTGGTTGCATTGAAG
GACCAGCAAATGAAACAGAGCTATGTCAGCGAGAAGCTAACCGTCTTATT
CAAGCATCAGTAAACGAATTTGCGATGTATTCTGACCAGTTTGATCGTAA
TACACTGAAGTTTAACCCACTGTTAACAGGAGATCAAATCAAGAGAGTTG
AAGTGAATTTGATTTTGTTTAGAAACTATGTGTTTCTCAGTGTTATGGCT
ATGAAGACCATCACCTCGACGTACAAAGACCAACAGGAAAAAGCATACGT
TGACCTTTACGAGAACCAACTTCAGAAGAATGTCAAATTCTACAATGATT
ACGCAAAAGCATCTGTTGATTTGGTCAAACAAATTAATCTGAACTACACA
TCAAATTATTTCAGCTCTAAATATGAACAGGAAATGAGAGATCATGAGAA
GAAGGTTCCAGATGGAACATTGCTACCTGAACCTGACTACCTTATTACTA
CCTTCGTTGAAACGGAGATTAAATGCAAATTACAAATGAATTCAAGATTT
ACTGATTATTGTAAAGCTGACGTGAGTGTAATGTTGTGCAAGAAAGGAAG
CAAGCTTTATGTCAATTGTAAAAAAGGAGACCGTATTCCTGACAACTGGC
GATACAAAAAGTCTTACTCCCATTATCCCGTATGGAGTAAGTATGATGTT
TCGCACACACCAGCTTTCTTGGCACGAGCCATCTGCAGATCAGAGTTGAA
TACCAAATTGAAAGATTTCAAAAGCTCTTACGCTCTTTCAATCAAACGTT
ACTGGGAAAATGAAGTTGGAAAATTGTTATCCTGTGCAAAGAAGTTGATT
GATTCCAAGAATCTGGATAATGCAAGAGAGACAGGCGGATGGAAATGTTG
A
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006434XLOC_006434Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011489-proteinTCONS_00011489-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011489-exon-sc0000128-1575043694:263572..263953TCONS_00011489-exon-sc0000128-1575043694:263572..263953Clytia hemisphaericaexon
TCONS_00011489-exon-sc0000128-1575043694:257865..258324TCONS_00011489-exon-sc0000128-1575043694:257865..258324Clytia hemisphaericaexon
TCONS_00011489-exon-sc0000128-1575043694:255668..256914TCONS_00011489-exon-sc0000128-1575043694:255668..256914Clytia hemisphaericaexon
TCONS_00011489-exon-sc0000128-1510915933:263572..263953TCONS_00011489-exon-sc0000128-1510915933:263572..263953Clytia hemisphaericaexon
TCONS_00011489-exon-sc0000128-1510915933:257865..258324TCONS_00011489-exon-sc0000128-1510915933:257865..258324Clytia hemisphaericaexon
TCONS_00011489-exon-sc0000128-1510915933:255668..256914TCONS_00011489-exon-sc0000128-1510915933:255668..256914Clytia hemisphaericaexon
TCONS_00011489-exon-sc0000128-1491911889:263572..263953TCONS_00011489-exon-sc0000128-1491911889:263572..263953Clytia hemisphaericaexon
TCONS_00011489-exon-sc0000128-1491911889:257865..258324TCONS_00011489-exon-sc0000128-1491911889:257865..258324Clytia hemisphaericaexon
TCONS_00011489-exon-sc0000128-1491911889:255668..256914TCONS_00011489-exon-sc0000128-1491911889:255668..256914Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000128supercontigsc0000128:255668..263953 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.153916	0.225139	0.814536	0.974911	0.786432	0.967466	11.6679	11.3526	1.83672	0.821493	10.9635	3.15982	2.08078	1.42561	7.3604	8.7485	0.169997	0.118429	0	0.0209918	0.0498949	0.11742	0.0865488	0	0.384961	0.126578	0	0.0276156	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00011489 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top