TCONS_00011502 (transcript) - C. hemisphaerica

Overview
NameTCONS_00011502
Unique NameTCONS_00011502
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2872

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00011502 ID=TCONS_00011502|Name=TCONS_00011502|organism=Clytia hemisphaerica|type=transcript|length=2872bp
cgtcttttcaaaaaaatacttcactttcgatttcatccAAAGATCCAAAA
CAAAACCACATGTTTTGAAATTGTTCCCGCTCAAATTACGACACACTACT
CGAAACGATTATCCAAtcaaattcttttatttgatcAGCGATTCTTTTAT
CAAGCCAATCAAAACGCGAAGAAGCTCTACGCATGCGTCAAAAAGGTCCT
TTCAAATcgaaaatgtgatttttgaatatggtagaatgaaaatcaaaaca
aactttcaaaacgTGAGGAGTTTTAGGTTGAAAGTTTGCTCTCTGTAGCT
GTGTTTCATCATATTCAAAGGCTTTTAGTACTGTGAGACTTATTTATTTT
GGGAACATGCAAGATGCCTACAATTAAGGAAGAAATACTTGACAATTCTT
ACGAAAATGGGAATAGTTTTTCAATGGAAAACAACCAATGTTCAAGGAAG
TTTTCATGTTCAAGCAATGAATCTTCGATGAGCAGTTCGAGTAGTGATTA
TGTTTTCGAACAGCAGTTTATCAACAGTGTTATTATACCAAACTCTAAAG
ATGGAGAAATTTCTAGACCTCCAAGCCAAGGATCAGTTCTTTCAACTGGT
GCATCAGAAGTTAAACTAAGtgATCAACAACAAACAAAGATACAGAATAT
TCTGGAGTCTGTCAAAGCGCTGTCTGatgctgaaaaattcttcttttatc
tGAAACTTCCCCAGAAAGAACAACAgcaATCTGCATCTTTATCTAATTCA
AAATGGGAGCAAACACAAGCATTTCAATGGATTCGTAATAATTTGGAAGA
ATGTGATAGTTCTGTTAATTTACCAAAACACGAAGTTTATGATGAATACA
AaattttttgcgAACAGAAAGGAAACAAACGATTCCTTAGTGCACCAGAC
TTTGGTAAAATTGTCAAATGCATGTTCCCAAATGTCAAAGCAAGACGTCT
TGGTACTAGGGGCAACTCAAAATATTGTTACAATGGACTGAGGAGAAAGA
TTCGACTAAAAGAAGAAACAAATGGAGAAAACGATAGCTCACAGTTATCA
AGCCCTATTTGTGAAGAAGTTGAATCAGCCGAGCAGACCTTCACTGCAGC
CTGTAAAGTCGTTTGTGAGTGGGCTAACAAGCTATTGGGAAGATGTTTCG
AGACGTTGTTAGATTTGGCTAAGTTCTTAGTTAATGGAAGTTATGTATCG
ACTAAATCAATGCCCGCTCTGGTCGTTATGTCTGCAACTCAAGACTGTTT
CAACCAAATTAATCAAAGACTAAGCTTACAAAAGTTGACCAAACCAgggc
aacaacaacaacaacaacaacaacaacaacaatctcAAAATAACACCAAT
CATTACAATTCAAGAGTTGAGGATATTTGTACACCGTCAAAAACAGTCAT
GGGACACGTTCGCAACAAACAACCTAACAACACACAACATCCGCAACAAA
ACTCACAACATCCGCAACAAAACTCATTACAaatgcaacaacaacaacaa
tcacccttccaaatgaaaaataacatgATCTCCACGACTACACTACATAC
ACAGAATCCAACAGGGAATATCAACTTGAACGAAATCACCATCGGCCAAA
CACAAAGCTCGTCATCTCATATCTTTACCAACGAGAATACGCAACAAACG
CAAGATAGCGCCCTCGTCACACCAAATACGCCCACCAAATCGAACGCCAA
TCACATGAGCAATATTAACATTCACATTAAAGAGGAGTCTTCCAACCCAT
CTGACCCTTCATACCAACCTCACACGCCACCCTTGACGCCCAAAAGAGAT
GAAAAACACGCCCAGCAACAAGTTGCCCAATCACCAACTGTAAAGACGCC
ACGCAAAGTTGGACGTCCGCCTAAAAATACACCCAAAAAGAATAAAACGT
CGTCATCACCTTACGCATCGCCTGTTTCTCGAAGCAAACAAAGCGGGATG
CCCGCCGCGAACGTTGCTTTACCTCATCATCAACCGAATATGATGGGCTT
CACTAACCCTTTACATAATGATTTTAGAAGCAGATACAATTGGACAGTAC
CAGGAGGTTCGTTCACCCCAAACACACATCCTCATCAACCAAGGATGCAT
CCTGTTCCATCATCACAAAACCATCAAATCACACAGAATCAACCACTATC
ATTACCACCACAGCAAATTCTATACAACAATAATAATCATCAACAGCAAA
TTCAACATCCTTCACAACAATTTGGACCGTTccctcaacaacaacaacaa
cttacAGACAATCACCACGATAAAGAacttcaaaacatttttatgaacGG
TGGTGGAGGAGCGGCACCACAAATTCCACCACAAACACCACCACAACACA
ATCAAATGATCAACCTAAACACAAGGTGTCAATCTGTACCGGTCACACAC
CAACAGCCAATCAACAACCAAGCGTATAACCCATTAACGCCTCAATTACA
TAGGATGACGACTCAACAAGACCACACAATGAACGCTAAACGAAACTTAA
ATTTCATGTTTGAAACACCAAGAAATCCTACACAGCTTCAAAACGAAAGA
CTTTTAAATAACACTCAAATACTTCCACAAAATAGTAACCACGATCATTT
AGTACCAAGTGGTAACACATTGCCAGGACTACAACAACAAAATGGTAGCA
ACCAGTTATACGATCTTGCATTTCCATTGAACGATTTATCAACTCCAGAG
GAACTGGAGGATATTCCATCTCTGGATAATATTGATAGCGATGACTTGAT
CAAATCTCTGAATAAAACGAATGGCGGTGATGGGAATGCATGGGTGAATG
ATTGGAGTAACGCAACAATGCCGGTCATGAACGTAACGTAATGTGATAAC
GTAGTGTAACGTAATGTAACGT
Run BLAST on NCBI

protein sequence of TCONS_00011502-protein

>TCONS_00011502-protein ID=TCONS_00011502-protein|Name=TCONS_00011502-protein|organism=Clytia hemisphaerica|type=polypeptide|length=825bp
MPTIKEEILDNSYENGNSFSMENNQCSRKFSCSSNESSMSSSSSDYVFEQ
QFINSVIIPNSKDGEISRPPSQGSVLSTGASEVKLSDQQQTKIQNILESV
KALSDAEKFFFYLKLPQKEQQQSASLSNSKWEQTQAFQWIRNNLEECDSS
VNLPKHEVYDEYKIFCEQKGNKRFLSAPDFGKIVKCMFPNVKARRLGTRG
NSKYCYNGLRRKIRLKEETNGENDSSQLSSPICEEVESAEQTFTAACKVV
CEWANKLLGRCFETLLDLAKFLVNGSYVSTKSMPALVVMSATQDCFNQIN
QRLSLQKLTKPGQQQQQQQQQQQSQNNTNHYNSRVEDICTPSKTVMGHVR
NKQPNNTQHPQQNSQHPQQNSLQMQQQQQSPFQMKNNMISTTTLHTQNPT
GNINLNEITIGQTQSSSSHIFTNENTQQTQDSALVTPNTPTKSNANHMSN
INIHIKEESSNPSDPSYQPHTPPLTPKRDEKHAQQQVAQSPTVKTPRKVG
RPPKNTPKKNKTSSSPYASPVSRSKQSGMPAANVALPHHQPNMMGFTNPL
HNDFRSRYNWTVPGGSFTPNTHPHQPRMHPVPSSQNHQITQNQPLSLPPQ
QILYNNNNHQQQIQHPSQQFGPFPQQQQQLTDNHHDKELQNIFMNGGGGA
APQIPPQTPPQHNQMINLNTRCQSVPVTHQQPINNQAYNPLTPQLHRMTT
QQDHTMNAKRNLNFMFETPRNPTQLQNERLLNNTQILPQNSNHDHLVPSG
NTLPGLQQQNGSNQLYDLAFPLNDLSTPEELEDIPSLDNIDSDDLIKSLN
KTNGGDGNAWVNDWSNATMPVMNVT
Run BLAST on NCBI

transcript from alignment at sc0000128:461806..474760-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00011502 ID=TCONS_00011502|Name=TCONS_00011502|organism=Clytia hemisphaerica|type=transcript|length=12955bp|location=Sequence derived from alignment at sc0000128:461806..474760- (Clytia hemisphaerica)
CGTCTTTTCAAAAAAATACTTCACTTTCGATTTCATCCAAAGATCCAAAA
CAAAACCACATGTTTTGAAATTGTTCCCGCTCAAATTACGACACACTACT
CGAAACGATTATCCAATCAAATTCTTTTATTTGATCAGCGATTCTTTTAT
CAAGCCAATCAAAACGCGAAGAAGCTCTACGCATGCGTCAAAAAGGTCCT
TTCAAATCGAAAATGTGATTTTTGAATATGGTAGAATGAAAATCAAAACA
AACTTTCAAAACGTGAGGAGTTTTAGGTTGAAAGTTTGCTCTCTGTAGCT
GTGTTTCATCATATTCAAAGGCTTTTAGTACTGTGAGACTTATTTATTTT
GGGAACATGCAAGATGCCTACAATTAAGGAAGAAATACTTGACAATTCTT
ACGAAAATGGGAATAGTTTTTCAATGGAAAACAACCAATGTTCAAGGAAG
TTTTCATGTTCAAGCAATGAATCTTCGATGAGCAGTTCGAGTAGTGATTA
TGTTTTCGAACAGCAGTTTATCAACAGTGTTATTATACCAAACTCTAAAG
ATGGAGAAATTTCTAGACCTCCAAGCCAAGGATCAGTTCTTTCAACTGGT
GCATCAGAAGTTAAACTAAGGTAAATTATTTTGGATTTTATATATACTTT
TAATTTTGAGGGTTCTGAAATTTTTACTTCATATAATTTTTGATCAAATA
TATTAAACTTTAGGATCAGTCTCACAGCTAGAGAGAGAAAGAAAAATTCT
GTAAGAAATATAAGCTAGTTATAAAAAAGCAAATCACAGGTGTAGAGAGT
GAACAATGGATGACTGTTAAATAGAAAAAGATGTTTCTCTATTTGAACGA
AAAAAACGTGCTCCTTTGTTATCTATTTTGATTTAAGATGAATAAGTCTC
TTTGCTATGTTTATCTCATGATTTCCTTGGCTGCTCTTCAAAAGTAACCT
TCATTCATTGAACAGCTACTTAAAATGTATACAAAAGAATTATTATCCCT
TTTATCATTCTTTAGATCATGGAATATTTACTTGAGATTTTCTTCAAGAT
TTAGACAATACCATTTTGAATGAATTCTCTCTTATATTTACTTTTTGATT
AAACTTCTTTAGGTTGATCCTTATACTGTTAAGATGACAGGAAATCGATT
ATTTGCTCATAAATTTTTGACTCATTTCTTCTTCAAGTCCTTCACCTCCC
AAAATATTTTAGCCATACCAATATGAAAATATCACTCTAGTCCCCAAAAC
TTTTAAATGGTTATTCAAACTCTAGCATTTTTATTAGCTATTTTGGAAAA
AATTACACCATTGAGAAAGTTGCACCACTCAAAAGCTCTTCCAGAAGCAT
TTAATGATAGGTGGAAAAAGTGATTTTAAATCTCAGACAGGAATTTCTAA
GCCATAATCATTACTTTTTACTCCTTCAATAAATATTTCAAAACTCGTGT
AACTTATGTCCAAAAAGGACATAAGTTTGGCGCAGAAAATTGGGGGCCTT
AGACATGGTCATTTATACGTCAAAAGAAGCGTATTAGGTTGTAGATTTCA
GAGCTACCTGTTAATGAAATTAATTTTATGTCTTTTTTGAGAAATTAGGA
ATAACTGCTTTATGACGTCATAAAATTTAAAATTTGAATATCTCAGAAAG
TACAGTGAGTGGTCCTAAATCCGACAGCCCTGCCTAAATCCGACCCCCCC
CCCAAATAACTGATATGAAAAAAAATTCTATGTTTACAAACATTCCCTCT
CCAAGTTGAACAATAAACTATTACAAGAACTCTCGAAACAAAACATCTAA
CAAGATGACTATAATGTCAAGATGCCAATTAAAGTGATCAAAAAAGTGTG
AGTTGTAAAAATAATTACCTCTATTCTGAATCCGTTGCTAGTGTTTAAAA
CGTTAACAATTTTGTAATAAAAAATTATGTTTTGTATAAGAAGCAATTAT
TGTTATTTGGTTCAATTGGTTCAGTGTATCAAATCTTTCAGTTNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNTTGCGTCACAGCAAAAGGTTTGTTTTTATTTTAGTTTG
TATCTTTGAAAGACCCCATCGGATTTAGGCAGGGCTGTCGGATTTAGGAC
CACTCACGGTACTTATATATCAAAAGATTATGAAATTTTACCAAATGATA
GATATCATTTAGGGAAAGTGTCTACTTCACATCTATTTTTTCATTTTTAA
AACAAAGTTTAAACGCATGTGTATGTTTTTATTTTATAAACTGTAAGTTG
TTATTACGCAAACTCGAGTAAGTTATGGCATGTCTCAAAAACTGAAAATT
ACCATAATTTTTAGATCGCATTAGTCGACAGAAATTGACCAAACAAATGA
ATGAACATGAAGGGTACTATGATGTAGTTTCTAACCTGATGTGTAACCTA
ATTGTTTTTTTGCTTATTTTCGCGAAAAACCGCTAAAACTGATTATGACG
TCATAATCGATGACGTCATCAAAACTAAAAGTTTTATTCCTCAATAATGG
TTTCTTTAATTCCCTTCAAACTCACACCAAAGATGTATCTCACCAAAGTC
TATCTTTTGAAAAAAAATTTTTCGAAATTTTGATGACGTCAACAAAAAAT
TAGATTTTTTGTTTTTTGCTGACGTCTATTTCTCCCCCTCGTATTGGCAT
CGTATCTCTAACTTTTGAAAAATATTTTTCACTTTTTCGATGACGTCAGC
AGAAATTAGCAAAAATCCATTTTGGCTGAAAAAATGAATTTGGTGTTGAT
TGTATTAGAATCAAGTTAATGTTAATGTTAATGTATTTATTCTTTAAAGT
CGAAAAATGTGTACAAATCTGTACTAGCTTTAAAGCTAATAGAGTTCGAC
TGCTTATTTTACAAAATGAATCATTCATCATCATCTGTTAATGCCCAATC
GCTGACGATTTCTTCTGTAGAGCATTTTCGTTTATAATTTGAAGATATTT
TTGTTAGGTTTTGTAAGTTTTTAACGATGCGTAGTTTTGTTCTTGGGCTT
CCTCTCATACGCCAGTTGAATCCTTTATTGTTAATGTTTTTATTGAGTTT
TTTTGCTTGTTCGTGCATCTCCTTGATCTTTTTTCGTTTGTTGATTGTGA
AATCTTCCGTTACACTTACCTGAAAGAAACAAGTTTCTTTTAGCATGTGT
AAATTCTTCATGATAAGATCTTTGTCATGTTGACTTTGCAGGGTGACTTT
CAGAGGACGGCCATTCTTTTTTTTTCTGTCTCCTAATCTGTGGTGAATAA
CATTGATTTCTGGAACATTGATGTCATCTAGGAGTTCTTGGAACCGAAAT
ATGTCATATTTTTTCCTATTTTCTTCTTCTTCCTTATCTGGGCCTGAATA
TTCGAGAAACTCGTGAACGATCATATTCAGTTTTCTAGATTCTATGTCTC
TCTTTTCACATTCTTCCTTCCGTTTTTGTTCTTTGGCAGATTTTAAATCT
TTTCTTTGCTTCTTGGTAATCTCGGCGTATGTTTTCTTTGATGTTTCCGT
CATTATTTCTGCTGTGTGCTTTATTTCCTCCTTTATCATGCTTCTTGTCT
TTTCCTCCATCTCTGTAAGTTTTCCTGCCAGAAAGGTTTTGAGGTCATTT
TTGATGGAATCACGGGTTTTTATATTGGTGTTGACCTCGTTGTTCAGTTT
TTGTATGACGTCTTCTTTCTTTTTAAGTTCATTTTGCATCATATGTTGAG
CGTTTTTCCCCACTTTATTTCTTAGGTTTTTCGTTATTCGTACGCAGTTT
GAACATAAGTAATGATCGTTGTAGGATGTCACCAATATTTGTAGTTGATA
CAGGGGTAACTGTGTGCACTCATATGAACTGATCTTTTACATTTTTTGCA
TGTTAAGCGATCCAGGTCTTCGTCTTCAGTACATCTTGACGGCGTTATTG
CCTTGTTATTATAATTTGAATTGTCTTTTTGAATTTGATTTTCTATATAT
ATTTCAGTAGTGTCAAAATAGGTTTTTGACAGCTAACATGCCTTAATTTA
AATTTAATTTTAAATTCTTGATCAGTCCTTTTCAAATTCATCTCATTAAT
ACAGTATACTTAAAGATCTATCAACTTATATGTGAGGGGAATTGGGTACC
CAGTGGTTTTTCCAAGCACCCAAATGCCCCCGTTAGGCGGTGGCATTAAA
CTCAATTCAAATTGAGTTTTTGAAAGAAAATTTTAAATTTATTATTTTCT
TTTACAAGAAAAAAGTAAAAGATGGAATTTAAAGTCCCTCTTATCCTTTT
TTAAACCCATTAAAAGGATAGATAGAGTTTACTAAGTTTAAATTTAACAG
TTAGTTTTAAGGAATTCATTTATTTTGGTCATTGATAGATTCTATAAATT
CATTCAATTTTAACCGTTTTAAAGTGCTAGTTAAGATAAAAATATGCTCA
GCTTTTGGGGACTTCGAACCCCCACCAGGGCTAGCCCTAGACCCACAGGG
TGCTCAAGAGACCCCCCAGCTTGCAGCCTCTGTTATCCAGCCTTCGGCTC
GATATCGCGACTTGCGTCTTTGTTAAAAATTCAATTTGAAAGTACAAACA
GAGGCATTGCTTGGTGCTTGGAAAAACCCCTGGTACCACCACTCTGATAC
AAGAGTGTGGGTGATATGCCAGACATTATGGTATGTGGTCACTATGCTCT
CCCGCACTGTTCAATTGTCCCCACTATGGATTGGTATTTCTATTTCTATC
CATTTTTTTGCATAAGCCTAAAAAAGCTAACATCGCAAATATTTAACAAA
AACTTGTTTACAAAAATAAAAAGTATAAAAAAGGATGAAGAATATTATAC
AATAACAAGTAGTAATAAATAGTAATACAGTAAAAAATAATAAAATATAT
TAAGATATATTGAATAAATAGTTTATTAGTTCAAAAATTCTTTTAAAAAA
AGCGTAATTCGAAGAAGTTGGTGATCAAAATTCCAAAAACTTAACAAAAG
AAAAATTTAATGGTGAAAAAGAAAATGAGGTATCTGTGTCTCGCGTGCAC
ATAACCACTAAGCGTTCCAACTTTAAATAGGAGGAAATCCTACTTTGTAA
GGAGTTGGACCCATTCCCCAGTGGAGAGGGCTCATATCATCATTCTCTTT
TTCCAGACTGTAATAACCCAACTTTCTGTCTCTGATATAGGACCTAATTT
CCAAAATTCCCATCAAACTTTTTGTAGAGTTCTGCCACTCCCGCCAAAAA
AAGGCATGACCCTACCAACCGTGAACTAAAATGCAATAATAATCCTCAAT
TTTTGGTGTTTTTCAGTGATCAACAACAAACAAAGATACAGAATATTCTG
GTAAGATTGTTATTTGACTATAGATATTTGCTGTTGCAGTGGTTGAAATA
AGCTTTTTCATTGTGATCGTTTTTTTTAGTGAATCACCGTGTTTAGTGTC
ACCAGAAAGCTGACCATGGTTTGGGCTGAGGGCAGAAAATTTTGAAAATT
TGCCCCTCATATGGCTTAATGACATCAATTGTTTTAATAAATCTTTTGAA
CGAGGGAAAGATAAGCTAGATCATTACACAGCTCTTAAATCTGAGAATTT
CCCGGTCGGTGATTTTTTATTTCTGNGAGGGAAAGATAAGCTAGATCATT
ACACAGCTCTTAAATCTGAGAATTTCCCAGTCAGTGATTTTTTATTTCTG
GTCAGTTTTAAACAATGACAGACCACTATTTCAAATGATTGATGAAATTG
ATGTTAACATATACTAATACTTATTTTTCAGGTGGGGAATGAATAGGTGT
TGATTATTTAAAATCTATAATTATCTTTTGCAGGTCATTATATTTCAATA
AATATTTTTCATTTTAGCCAGCTTCCACAAAATTTATCTAAAATTTTAGC
ACGTCCAACTACTTTCTTAGTTTACAAATTTTTTAATATTATTCTTTTAG
GAGTCTGTCAAAGCGCTGTCTGATGCTGAAAAATTCTTCTTTTATCTGAA
ACTTCCCCAGAAAGAACAACAGTAAGTTCAGTGTTATGTAAGCTTTTAAA
ATTCAATGCCATTTGTTGGCACACTTAAGAATGGTCTTTTAAAAGAATTT
TAATCAAAATGTTATTATTATTAGATGCTTACCAAAGATCTTTTGTTTTT
TATTATTTTTAGGCAATCTGCATCTTTATCTAATTCAAAATGGGAGCAAA
CACAAGCATTTCAATGGATTCGTAATAATTTGGAAGAATGTGATAGTTCT
GTTAATTTACCAAAACACGAAGTTTATGATGAATACAAGTAAACAATTTT
TAGTGCTCTATGACATGATATTTTGGTGTTCAGTTACTTTCTAGTTGAGT
CATCTTTCAAAGTGTTTTACCCATGAAATGCTTTTTCCAAATTCCTGGTT
ATTCTTATTATTTTTTAAATTGCAACCCAGTAGCTCCCTGGTGCTCTGGG
TGACCAAGAGCAGGGATTTTTCTAAGCACTTTTTTTATGTCCGTATACCG
GCTNTTTTCCAAATTCCTGGTTATTCTTATTATTTTTTAAATTGCAACCC
AGTAGCTCCCTGGTGCTCTGGGTGACCAAGAGCAGGGATTTTTCTAAGCA
CTTTTTTATGTCCGTATACCGGCCAAAATATTCAATCTAAGATTGAGATT
TTGAAACTCAATCCAAAAAAGAAAATATATTTTCTAGCAAAATTAAAACT
GTTTGTTGTGTGCAAGCATAAGTAACTAATATTATCTAAAGATTTTTCGG
GAGCCTCGCCCTCTAAACACCCATCAGACACCCAGCTTCATCAATGTACA
GCTTCTCTGAGCAAACTCCCTATCAGGCATATTAAAAACTCAATCTACGT
TTACAAAAACGGCCCCAGCTCCAAGTGCTTAGAAAAATCTCTGAAGTGTG
AATGCTTCATCTCAGACGATCGTTTGAATCCAAACAAACCTGACATAGCC
TGACATTTCTAATTTGCTTTTTCAGAATTTTTTGCGAACAGAAAGGAAAC
AAACGATTCCTTAGTGCACCAGACTTTGGTAAAATTGTCAAATGCATGTT
CCCAAATGTCAAAGCAAGACGTCTTGGTACTAGGGGCAACTCAAAGTAAG
TGAAATGCTTTTTTCAGTGAATCAAAATTTAAGGGGGGATATTGATTCCA
TGTTCAGTTTTAAAGTTTGTCCTTCTTAGATACAATAAATTGAAGTTGAG
ATTAGAATTGTTTGATATTCAAAGTTTCACGCAACCTTTCGTTACGATCT
TCAGTCAAAAATTCTATACTAAAAGTTTACAGGAAAATTGTCCTTCTTAG
ATATGGGTTTCCCCATGATTTCTGTCCCATAACCATAAAGAATAGTGAGT
TTTGTTAAAATATGTAATTTATACTACTGATAACTTGCTTTTGATTTAGA
TATTGTTACAATGGACTGAGGAGAAAGATTCGACTAAAAGAAGAAACAAA
TGGAGAAAACGATGTAGGAGAATTATTCCTTTTTTGTTGTAATCTGACAA
AATTCACTAGTTTTGTAAAATAAAGTTTTGTTTACTGTACTGACTTTTGG
TAAATTAGCTAGGACAGTGAAAAATAAATGATTACCTTTTTTCCCAGTGT
TAAGATCGTTTTTTAAATTGGAGATTTATTTTCGTCTGTAAACAATAAGG
CGACAATATAATCTTTCAAATTCGGAGCGCATGCATAGAAGATGCGTTAG
AGTATATCAATGTTAATTGTGTTCTCCGAGCAGATTCTTATATGCATGGC
ATGTTTTGACTCTAAAGGCCATGGCTCGGAAAGAGAATCTGTCATGGTTA
GTGCACCGCCTTGATCTTCTTCATGCAGTTTTGGGATGAATACCTTAATG
GGATAAAATTTCGCGGTTTTTAATTTCGCGGTGACTTAATCTCGCGGGTG
GCACTGTTGGGTGGCAATATTTTCACGATTTTGTATCTTTATACTGTCAA
ATCATGCACATTGGTTGTTGAAATACACATTATTTGCGCTTTTATGATGC
AAGTAACCATTCAAAAAGTATTTATTTGACATATTTTGAGTTTTGATTAG
AAATATTTAGCGGATGAGCCCTTTCCAAATTTCCATTGGGATTTAATTTC
GCGGATTTTCGCGGATGACACTCAAATCCGCGAAATCCGCGAAATTTAAT
CCCCGCGAAAGTTTATCCCATTAAAGTACTAACAACGCCAGATCGTTACA
TTTGACGCCGTAACAGAGCGTGGTATGCGTTTTACTATTTCAGAGCTCAC
AGTTATCAAGCCCTATTTGTGAAGAAGTTGAATCAGCCGAGCAGACCTTC
ACTGCAGCCTGTAAAGTCGTTTGTGAGTGGGCTAACAAGCTATTGGGAAG
ATGTTTCGAGACGTTGTTAGATTTGGCTAAGTTCTTAGTTAATGGAAGTT
ATGTATCGACTAAATCAATGCCCGCTCTGGTCGTTATGTCTGCAACTCAA
GACTGTTTCAACCAAATTAATCAAAGGTACTACATAGACGTTTAATTATT
TTTGAAAAATGTGATAAAACTACTAAAGAACTTTTAGGTTATCTCGCTAA
AATTATTAAATCATTATAATCAAATTGAAAGGTTTGTAGAATATAAGAAA
AACTACGAGTTAATAGTTTTTAAAACAGCCTCTTAAATGCGATATTAAGG
TATAGCAATAAAACGATAGTGCGCATGCACAGTTTGTTTGAAAAAAGCAG
AATTAAATTCATGTCTATAAATCTATTTTTATGAATTTTATTTATTACTC
AGTCTCCATAACAAAAAATCCTAAAATGCAATAAAAAGTTTTAAAGGGTT
TTATTTCACATAAAATCTGTCCCTTTTTTTCTAGACGTATTGTATAGTAT
GACTTATCTTTGCCAAGAAAACTATATTAATTTTTAAAAGAAATTTTATC
GAGCAATACTCACTCTTTTTCTAGACTAAGCTTACAAAAGTTGACCAAAC
CAGGGCAACAACAACAACAACAACAACAACAACAACAATCTCAAAATAAC
ACCAATCATTACAATTCAAGAGTTGAGGATATTTGTACACCGTCAAAAAC
AGTCATGGGACACGTTCGCAACAAACAACCTAACAACACACAACATCCGC
AACAAAACTCACAACATCCGCAACAAAACTCATTACAAATGCAACAACAA
CAACAATCACCCTTCCAAATGAAAAATAACATGATCTCCACGACTACACT
ACATACACAGGTAACTTAGCTTACAATAGACCTTATCGGGGTTTTTGATT
TTTCTAAAACAGTGATGCATTGTGAGATTGTTTCGGGGGTATTACAATAG
AATTCCCTCGAGCGATTCCTAAAAGATTTCTATTGTAATAACTCCGAAAC
AATCCCACAATGCATCGCTTTTTTAGAAAAATCAAAAACTTCGATAAGAT
CTATTTTTATACCGTTATCATTTAGAGTTTGTTTGTTTGTTTGTCAACCT
TAATAAGAGCATTGGGATTGTGGTTCACTAGGCGGGGTCGATGCAAAATT
CTGTAATTAGGAGCGCGTCCTTGGAATAACTTCAGGTACTCAAAGTCTTA
CATCCGTAAAAATAGTCCCACCCCTACCAAGGGCGATTTTTTCTTTTTGG
ACCTACCTGGAGGTCCTATGAATTAACCTGTGTTCGTCCGTCCGTCCGTC
CGTCCGTCCGTCTGTTACCAACTTTTCTCGGGATTGAATCATAGGAATCT
TTTGATTTTTGGTACAAAGGTGCAAAATGGTGGTGGGCAAAATGTGACAG
AGCCCGATTTTCGAAAAAAAAATATGGGGGGCAAATTTGGGCCAAAAAAC
GGCTAAAAAACGGGTTTTTTGGACTTTGTGAAAAATTGGATCATTAATTT
TTTCTGATTTTTTGCATGAAAGTAGGGTACCATCATAGGTAAAAGATGGC
TCAAGCAGATTTTTGCAAAAAAATATTTTTGGCTCAAAAAACGCATGTTT
TTCTATAAGAATCACTCTTAATAAGCATACATCAATTTTCTTAGTCAAAT
TACTCTCAAAACAAGTCAAATTTTTTTTTTTTATGAGATAGATGTGTTTT
TTTGCTCATGAGGGCCTACTTTCGAAGAATATGTGTGTTTAGACATGAAA
TTTTGGTTGCTTGGCGTGTTTTCATTAAAAAACTGGCCAAATTCGATATT
TTTTTATAAGCACATTATCAATTACTTAGGTATTAGCTTTTCTCGAGATT
GGTTCTTTATGATTTATTGCACAAACATGCATAACTATAAACCCTAGAAT
GTGACGGAGCTCGATTTTTGGAAAAACATTTTGGGGGTAAATTTCAGCTA
AAAAACAGCCAAAAAAAGGGTATTTTGGACCTTGTGAAATATTGATTTTT
TGATTTTTTGCATGAAAGTAGGTAAAAGATGGTTCAAGCAGATTTTTGTA
AAAAAATAATTTTTCAGCTCAAAAAACGCATCTTTATCAATAAGAATCAC
TAATAATAAGCATACATCAATGTTCTTAGCCAAATTACTCAATTTTTTGA
TGAGATAGATGTTTGTTTTTGCTCACAAAGTCTTGAATATGAAAGAATAT
TTCAAGAGCATGAAATTTTGGTTTCTAAACGTTTTTTTTATAAGAAACAA
ACGACTCATTTTAATAGATCGTCACTATTTGTGTTCTGAATGATTGTTTA
ATGGTCACGTCACGTAGATATCAATTATAAGTGTGTTGAATGCATAACCA
GGTAGGTCCATAAAAGTATCACTTGTTTTTCGATTGTCTTGCCGTATGTT
GACTGTGCCCTTCCTTTCCTGCGAAGGAGAGTTTGGTAGGTACATGCTAT
CGAATAGCTGATTGACTTTATTGCGATATGCAACAATTATCAACAACTGC
TAAAAAGATTATGGAAAAGCTAGCCTAGTCGATAGCTACAAAAATCAAGA
CGAAGTATGGTATAGTAAGGAGTACTAAATTTAACATTATCCCGTAACAA
ATATTGTATTATCATATAACAACTATAACACAAATTATAAACGGCTCCAG
TATATTATATACGTATAGTGTAAACAACGGGATTTTCACGTCGTATTATT
ATTGCTGCAATGTGAGGTCACGAGTCTATTCATTATTTCCCTTTCTTCCT
CATAAACAGAATCCAACAGGGAATATCAACTTGAACGAAATCACCATCGG
CCAAACACAAAGCTCGTCATCTCATATCTTTACCAACGAGAATACGCAAC
AAACGCAAGATAGCGCCCTCGTCACACCAAATACGCCCACCAAATCGAAC
GCCAATCACATGAGCAATATTAACATTCACATTAAAGAGGAGTCTTCCAA
CCCATCTGACCCTTCATACCAACCTCACACGCCACCCTTGACGCCCAAAA
GAGATGAAAAACACGCCCAGCAACAAGTTGCCCAATCACCAACTGTAAAG
ACGCCACGCAAAGTTGGACGTCCGCCTAAAAATACACCCAAAAAGAATAA
AACGTCGTCATCACCTTACGCATCGCCTGTTTCTCGAAGCAAACAAAGCG
GGATGCCCGCCGCGAACGTTGCTTTACCTCATCATCAACCGAATATGATG
GGCTTCACTAACCCTTTACATAATGATTTTAGAAGCAGGTTAGTATCAAA
CTTATTATAATGAGAATCCATTATGTTCATATTACTAATTATTATTTGAA
TTATTACTACTCCAAAACTGTAAGATTGCACAGTGGAGTCTCCATAACTC
GAATATGTTTTCTGGTCAACAAGTCTCGATTGAATTTTTCCATAACTCGA
ACAAGTTTTAGCTCAACGTGCATGTTCGACTTATGGAGAAAAAAAACTGA
CTGTCAATTCAAAAAAGTTCTGGGTTAATCAAGGCGCCTACCACCTTTTA
AGGGGACGTAAATCATTGGAGGTACCTAAAAGGGGGCTGAAACCATGATA
TTTATACCTTATTTGATGATTTTTCTCTTCTGTATGGATGAAATTAGCCT
AGAAATCTAAGCTACTTTGATGTAGTCACTAGCAAAGTCTGATGGTTTAT
TGTAACTAAAATTTGTAAGGATAAACTTGTAAGTTTCTTCGTCATCAAAA
ACGTTTCTTTTTTCAGATACAATTGGACAGTACCAGGAGGTTCGTTCACC
CCAAACACACATCCTCATCAACCAAGGATGCATCCTGTTCCATCATCACA
AAACCATCAAATCACACAGAATCAACCACTATCATTACCACCACAGCAAA
TTCTATACAACAATAATAATCATCAACAGCAAATTCAACATCCTTCACAA
CAATTTGGACCGTTCCCTCAACAACAACAACAACTTACAGACAATCACCA
CGATAAAGAACTTCAAAACATTTTTATGAACGGTGGTGGAGGAGCGGCAC
CACAAATTCCACCACAAACACCACCACAACACAATCAAATGATCAACCTA
AACACAAGGTGTCAATCTGTACCGGTCACACACCAACAGCCAATCAACAA
CCAAGCGTATAACCCATTAACGCCTCAATTACATAGGATGACGACTCAAC
AAGACCACACAATGAACGCTAAACGAAACTTAAATTTCATGTTTGAAACA
CCAAGAAATCCTACACAGCTTCAAAACGAAAGACTTTTAAATAACACTCA
AATACTTCCACAAAATAGTAACCACGATCATTTAGTACCAAGTGGTAACA
CATTGCCAGGACTACAACAACAAAATGGTAGCAACCAGTTATACGATCTT
GCATTTCCATTGAACGATTTATCAACTCCAGAGGAACTGGAGGATATTCC
ATCTCTGGATAATATTGATAGCGATGACTTGATCAAATCTCTGAATAAAA
CGAATGGCGGTGATGGGAATGCATGGGTGAATGATTGGAGTAACGCAACA
ATGCCGGTCATGAACGTAACGTAATGTGATAACGTAGTGTAACGTAATGT
AACGT

Coding sequence (CDS) from alignment at sc0000128:461806..474760-

>TCONS_00011502 ID=TCONS_00011502|Name=TCONS_00011502|organism=Clytia hemisphaerica|type=CDS|length=2478bp|location=Sequence derived from alignment at sc0000128:461806..474760- (Clytia hemisphaerica)
ATGCCTACAATTAAGGAAGAAATACTTGACAATTCTTACGAAAATGGGAA
TAGTTTTTCAATGGAAAACAACCAATGTTCAAGGAAGTTTTCATGTTCAA
GCAATGAATCTTCGATGAGCAGTTCGAGTAGTGATTATGTTTTCGAACAG
CAGTTTATCAACAGTGTTATTATACCAAACTCTAAAGATGGAGAAATTTC
TAGACCTCCAAGCCAAGGATCAGTTCTTTCAACTGGTGCATCAGAAGTTA
AACTAAGTGATCAACAACAAACAAAGATACAGAATATTCTGGAGTCTGTC
AAAGCGCTGTCTGATGCTGAAAAATTCTTCTTTTATCTGAAACTTCCCCA
GAAAGAACAACAGCAATCTGCATCTTTATCTAATTCAAAATGGGAGCAAA
CACAAGCATTTCAATGGATTCGTAATAATTTGGAAGAATGTGATAGTTCT
GTTAATTTACCAAAACACGAAGTTTATGATGAATACAAAATTTTTTGCGA
ACAGAAAGGAAACAAACGATTCCTTAGTGCACCAGACTTTGGTAAAATTG
TCAAATGCATGTTCCCAAATGTCAAAGCAAGACGTCTTGGTACTAGGGGC
AACTCAAAATATTGTTACAATGGACTGAGGAGAAAGATTCGACTAAAAGA
AGAAACAAATGGAGAAAACGATAGCTCACAGTTATCAAGCCCTATTTGTG
AAGAAGTTGAATCAGCCGAGCAGACCTTCACTGCAGCCTGTAAAGTCGTT
TGTGAGTGGGCTAACAAGCTATTGGGAAGATGTTTCGAGACGTTGTTAGA
TTTGGCTAAGTTCTTAGTTAATGGAAGTTATGTATCGACTAAATCAATGC
CCGCTCTGGTCGTTATGTCTGCAACTCAAGACTGTTTCAACCAAATTAAT
CAAAGACTAAGCTTACAAAAGTTGACCAAACCAGGGCAACAACAACAACA
ACAACAACAACAACAACAATCTCAAAATAACACCAATCATTACAATTCAA
GAGTTGAGGATATTTGTACACCGTCAAAAACAGTCATGGGACACGTTCGC
AACAAACAACCTAACAACACACAACATCCGCAACAAAACTCACAACATCC
GCAACAAAACTCATTACAAATGCAACAACAACAACAATCACCCTTCCAAA
TGAAAAATAACATGATCTCCACGACTACACTACATACACAGAATCCAACA
GGGAATATCAACTTGAACGAAATCACCATCGGCCAAACACAAAGCTCGTC
ATCTCATATCTTTACCAACGAGAATACGCAACAAACGCAAGATAGCGCCC
TCGTCACACCAAATACGCCCACCAAATCGAACGCCAATCACATGAGCAAT
ATTAACATTCACATTAAAGAGGAGTCTTCCAACCCATCTGACCCTTCATA
CCAACCTCACACGCCACCCTTGACGCCCAAAAGAGATGAAAAACACGCCC
AGCAACAAGTTGCCCAATCACCAACTGTAAAGACGCCACGCAAAGTTGGA
CGTCCGCCTAAAAATACACCCAAAAAGAATAAAACGTCGTCATCACCTTA
CGCATCGCCTGTTTCTCGAAGCAAACAAAGCGGGATGCCCGCCGCGAACG
TTGCTTTACCTCATCATCAACCGAATATGATGGGCTTCACTAACCCTTTA
CATAATGATTTTAGAAGCAGATACAATTGGACAGTACCAGGAGGTTCGTT
CACCCCAAACACACATCCTCATCAACCAAGGATGCATCCTGTTCCATCAT
CACAAAACCATCAAATCACACAGAATCAACCACTATCATTACCACCACAG
CAAATTCTATACAACAATAATAATCATCAACAGCAAATTCAACATCCTTC
ACAACAATTTGGACCGTTCCCTCAACAACAACAACAACTTACAGACAATC
ACCACGATAAAGAACTTCAAAACATTTTTATGAACGGTGGTGGAGGAGCG
GCACCACAAATTCCACCACAAACACCACCACAACACAATCAAATGATCAA
CCTAAACACAAGGTGTCAATCTGTACCGGTCACACACCAACAGCCAATCA
ACAACCAAGCGTATAACCCATTAACGCCTCAATTACATAGGATGACGACT
CAACAAGACCACACAATGAACGCTAAACGAAACTTAAATTTCATGTTTGA
AACACCAAGAAATCCTACACAGCTTCAAAACGAAAGACTTTTAAATAACA
CTCAAATACTTCCACAAAATAGTAACCACGATCATTTAGTACCAAGTGGT
AACACATTGCCAGGACTACAACAACAAAATGGTAGCAACCAGTTATACGA
TCTTGCATTTCCATTGAACGATTTATCAACTCCAGAGGAACTGGAGGATA
TTCCATCTCTGGATAATATTGATAGCGATGACTTGATCAAATCTCTGAAT
AAAACGAATGGCGGTGATGGGAATGCATGGGTGAATGATTGGAGTAACGC
AACAATGCCGGTCATGAACGTAACGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006441XLOC_006441Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011502-proteinTCONS_00011502-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011502-exon-sc0000128-1575043694:474141..474760TCONS_00011502-exon-sc0000128-1575043694:474141..474760Clytia hemisphaericaexon
TCONS_00011502-exon-sc0000128-1575043694:469361..469394TCONS_00011502-exon-sc0000128-1575043694:469361..469394Clytia hemisphaericaexon
TCONS_00011502-exon-sc0000128-1575043694:468690..468760TCONS_00011502-exon-sc0000128-1575043694:468690..468760Clytia hemisphaericaexon
TCONS_00011502-exon-sc0000128-1575043694:468423..468548TCONS_00011502-exon-sc0000128-1575043694:468423..468548Clytia hemisphaericaexon
TCONS_00011502-exon-sc0000128-1575043694:467616..467735TCONS_00011502-exon-sc0000128-1575043694:467616..467735Clytia hemisphaericaexon
TCONS_00011502-exon-sc0000128-1575043694:467248..467311TCONS_00011502-exon-sc0000128-1575043694:467248..467311Clytia hemisphaericaexon
TCONS_00011502-exon-sc0000128-1575043694:466235..466467TCONS_00011502-exon-sc0000128-1575043694:466235..466467Clytia hemisphaericaexon
TCONS_00011502-exon-sc0000128-1575043694:465501..465786TCONS_00011502-exon-sc0000128-1575043694:465501..465786Clytia hemisphaericaexon
TCONS_00011502-exon-sc0000128-1575043694:463123..463601TCONS_00011502-exon-sc0000128-1575043694:463123..463601Clytia hemisphaericaexon
TCONS_00011502-exon-sc0000128-1575043694:461806..462644TCONS_00011502-exon-sc0000128-1575043694:461806..462644Clytia hemisphaericaexon
TCONS_00011502-exon-sc0000128-1510915933:474141..474760TCONS_00011502-exon-sc0000128-1510915933:474141..474760Clytia hemisphaericaexon
TCONS_00011502-exon-sc0000128-1510915933:469361..469394TCONS_00011502-exon-sc0000128-1510915933:469361..469394Clytia hemisphaericaexon
TCONS_00011502-exon-sc0000128-1510915933:468690..468760TCONS_00011502-exon-sc0000128-1510915933:468690..468760Clytia hemisphaericaexon
TCONS_00011502-exon-sc0000128-1510915933:468423..468548TCONS_00011502-exon-sc0000128-1510915933:468423..468548Clytia hemisphaericaexon
TCONS_00011502-exon-sc0000128-1510915933:467616..467735TCONS_00011502-exon-sc0000128-1510915933:467616..467735Clytia hemisphaericaexon
TCONS_00011502-exon-sc0000128-1510915933:467248..467311TCONS_00011502-exon-sc0000128-1510915933:467248..467311Clytia hemisphaericaexon
TCONS_00011502-exon-sc0000128-1510915933:466235..466467TCONS_00011502-exon-sc0000128-1510915933:466235..466467Clytia hemisphaericaexon
TCONS_00011502-exon-sc0000128-1510915933:465501..465786TCONS_00011502-exon-sc0000128-1510915933:465501..465786Clytia hemisphaericaexon
TCONS_00011502-exon-sc0000128-1510915933:463123..463601TCONS_00011502-exon-sc0000128-1510915933:463123..463601Clytia hemisphaericaexon
TCONS_00011502-exon-sc0000128-1510915933:461806..462644TCONS_00011502-exon-sc0000128-1510915933:461806..462644Clytia hemisphaericaexon
TCONS_00011502-exon-sc0000128-1491911889:474141..474760TCONS_00011502-exon-sc0000128-1491911889:474141..474760Clytia hemisphaericaexon
TCONS_00011502-exon-sc0000128-1491911889:469361..469394TCONS_00011502-exon-sc0000128-1491911889:469361..469394Clytia hemisphaericaexon
TCONS_00011502-exon-sc0000128-1491911889:468690..468760TCONS_00011502-exon-sc0000128-1491911889:468690..468760Clytia hemisphaericaexon
TCONS_00011502-exon-sc0000128-1491911889:468423..468548TCONS_00011502-exon-sc0000128-1491911889:468423..468548Clytia hemisphaericaexon
TCONS_00011502-exon-sc0000128-1491911889:467616..467735TCONS_00011502-exon-sc0000128-1491911889:467616..467735Clytia hemisphaericaexon
TCONS_00011502-exon-sc0000128-1491911889:467248..467311TCONS_00011502-exon-sc0000128-1491911889:467248..467311Clytia hemisphaericaexon
TCONS_00011502-exon-sc0000128-1491911889:466235..466467TCONS_00011502-exon-sc0000128-1491911889:466235..466467Clytia hemisphaericaexon
TCONS_00011502-exon-sc0000128-1491911889:465501..465786TCONS_00011502-exon-sc0000128-1491911889:465501..465786Clytia hemisphaericaexon
TCONS_00011502-exon-sc0000128-1491911889:463123..463601TCONS_00011502-exon-sc0000128-1491911889:463123..463601Clytia hemisphaericaexon
TCONS_00011502-exon-sc0000128-1491911889:461806..462644TCONS_00011502-exon-sc0000128-1491911889:461806..462644Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000128supercontigsc0000128:461806..474760 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.79272	5.2533	2.82458	2.74291	75.6193	54.5762	16.0491	16.3728	1.88643	5.02005	2.37555	1.44625	1.19621	1.03091	2.96587	3.09309	5.70099	4.53191	2.26679	1.34871	2.44394	2.53213	4.64892	5.92246	2.91796	3.29365	2.27288	1.73955	3.01416	3.10281
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR003150DNA-bd_RFX
IPR011991WHTH_DNA-bd_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0003677 DNA binding
Blast
[Close]
BLAST of TCONS_00011502 vs. Swiss-Prot (Human)
Match: RFX7 (DNA-binding protein RFX7 OS=Homo sapiens GN=RFX7 PE=1 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 2.339e-44
Identity = 87/182 (47.80%), Postives = 117/182 (64.29%), Query Frame = 1 
Query:  739 LSNSKWEQTQAFQWIRNNLEECDSSVNLPKHEVYDEYKIFCEQKGNKRFLSAPDFGKIVKCMFPNVKARRLGTRGNSKYCYNGLRRKIRLKEET------NGENDSSQLSSPICEEVESAEQTFTAACKVVCEWANKLLGRCFETLLDLAKFLVNGSYVSTKSMPALVVMSATQDCFNQINQ 1266
            +S+S+ +Q  AF WIRN LEE     +LPK EVYDEYK +C+  G    LSA DFGKI+K +FPN+KARRLGTRG SKYCY+GLR+K  +   T      +   D  + + P  +     E+  ++AC++VCEWA K+L + F+T+L+LA+FLV   Y+ TKSM AL VM+A       I Q
Sbjct:    1 MSSSRAQQMHAFSWIRNTLEE-HPETSLPKQEVYDEYKSYCDNLG-YHPLSAADFGKIMKNVFPNMKARRLGTRGKSKYCYSGLRKKAFVHMPTLPNLDFHKTGDGLEGAEPSGQLQNIDEEVISSACRLVCEWAQKVLSQPFDTVLELARFLVKSHYIGTKSMAALTVMAAAPAGMKGITQ 180
The following BLAST results are available for this feature:
BLAST of TCONS_00011502 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RFX72.339e-4447.80DNA-binding protein RFX7 OS=Homo sapiens GN=RFX7 P... [more]
back to top