TCONS_00011596 (transcript) - C. hemisphaerica

Overview
NameTCONS_00011596
Unique NameTCONS_00011596
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2261

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00011596 ID=TCONS_00011596|Name=TCONS_00011596|organism=Clytia hemisphaerica|type=transcript|length=2261bp
CAACTTACTGCTCAGAAACAAATAGAACTGACGCAGCAATCTTGAATTAT
GTCGAAACTCAAATTTTTGGCCATGCTGACTTTCTTCTACTGCAGTCAAC
GGACACACTCGATACCTTTGACAACCTCTACAGAACCACAGGGACCTTTT
GCAACTTCGACAAAGCCACAAGGACCTTTCGTAACTGCAACTGAAGTTCA
AGGACCTTTCGTAACTACAACAAAGCCACAAGGACCTTTCGTAACTGCAA
CTGAAGTTCAAGGACCTTTCGTGACTACAACAAAGCCACAAGGACCTTTC
GTAACTACAACTGAAGCTCAAGGACCTTTCGTAACTACAACTGAAGCTCA
AGGACCTTTCGTGACTACAACTGAAGCTCAAGGACCTTTAACAACTACGG
AATCTTCTGCTATTTACTTTCAAAAGAGGGTTTCTGCTTTCCAAAGTGAA
ATAACAACATATGAAAAAGTATTCGCCAACGAAGTTCTTTCAAAGGAGCA
AATTAGTGAACTCATTAAGCGATTGGAAACCTTAAAGGACAAAGAGATGA
AAAATGTGGAAACACAACTTGGTCAGACCATTGAACAGAATGCTGGCAAC
ACACTTTTACTTGAAGAGTTGAAGATGTTTTCACAAGCTATCAAGACTTT
ACTCCAACGAACTGTTGACTTGTTGAGGAAGTTTAATTGCAGATTGAAAG
ATATGTTAAGCGATGATTTTGAATCGTGGTTGAAGAGCATTGATGACAGA
GTTCAGGAATTGAAATCTGGAGAATGCAACGGTGAAAttttcaacaaaaa
atgcaTCACCAACTTGCAAAACTACATTCCCCAACTCGCCGAAATCCAAG
TTAGAAGTGACCAACCACTTTACATACTGAACAAATACGATTGTGGTTTG
ACTCCTGAAGAGAAAAAGGACTTCGAAAATCGTCTGTTAGGATTGAAACA
GCAAGCCGGTGCTCTGATCAAGGTCATTCAAGATTGTTTGAAGAGATTCT
TTGACatcaagatttccaaaatgaatTTAATCAAGGATTCTCTGCAGAAG
AGAATCAAAACAGCTGGACAACTTTGGATAGATACCATCTTTCTTGAAAA
CAGATATGTAGGTAAAGAGATAGAAGCTCTCGCCAAGCTGTTTGGTTCTT
ATCAAAGTGATCTTCAGGAACTGAaggatgaaatgaaaattgtgAAGGAT
TGTCTCAGACAAGCTCAAAACTTTCTGACATCGGAGAATTATCAACAATG
TACACAAACTTTTGATGGTTTGCAGAAGGAATCAGATTTACTGtgcaaaa
atataaaactttggTTACAATTCATGGAaaagagtatggtattttttttg
aaacaggaggttgaaaaaatggaaaagaaatttgaagatttgagaGTGGA
AAATCACCATATCTTCAAAGTCCTTGGACTTAATTGCAACTCAGTCAAAT
ATGCTCTGATTGGTTTGAAAGTGCTGAAACCAAAACTTGAGACGTACAAA
GAAGAGCTCCAGTTGTTGTATCGGTATCTCGATGACATCAAAGACTCTCC
TAAAGAGTATCAGGAGTTGAAAGCTAAGCTAGACACATTGAAAGGAAAAG
TTGAAggactttgtgaaaaagttacaaaatacATTCCTTTCCTTGAGTTT
TATGCCAGCTTTTCGAattGTTCTTTTGTCACAACGACTACTGACCCGTC
AACACTTGGTACCACCACTTCTGGATCAATAACGCCTACACCACCAACAT
CTGGTCCATCAACGGCCGACCCACCCTTCGTTACCACGACGACAGATGGA
TCTCCGTTTAGTCGTTAAACGGTGTGACGGTGTGACGGTGCAAGTGGTTG
GTCAATATTGGATGGTGATtgaatttatttgattttttattcgcCTGGCG
AATTTGTATTTAATTCAATCTGTTACGAAACGTGGTAGGAAAATTGCCTC
GTGGAACAATTCAACCCAGACTATTCCCCAACTTGGACTTTTGGTCCCAG
GACAACCCCCCCTCAAACAATTACTTCCGGACAATTAGGTCTATTGATAT
TCCCAtcatagaaaaaaaatgtcatcttacactttttaattttcaactaa
AGGTCGATTTATTCTTTTCAATTCTCTCTTGATTATGTAACAGTGAGATA
GAATCAACGAAGACAATTTTAGACAAAAAATCGAATGGTAGCTAGATCTA
GCGCTTCAGGTGatcaaaaaaattctatttttcgaatcttCTTCTTTCCA
AGATAGCGCTC
Run BLAST on NCBI

protein sequence of TCONS_00011596-protein

>TCONS_00011596-protein ID=TCONS_00011596-protein|Name=TCONS_00011596-protein|organism=Clytia hemisphaerica|type=polypeptide|length=589bp
MSKLKFLAMLTFFYCSQRTHSIPLTTSTEPQGPFATSTKPQGPFVTATEV
QGPFVTTTKPQGPFVTATEVQGPFVTTTKPQGPFVTTTEAQGPFVTTTEA
QGPFVTTTEAQGPLTTTESSAIYFQKRVSAFQSEITTYEKVFANEVLSKE
QISELIKRLETLKDKEMKNVETQLGQTIEQNAGNTLLLEELKMFSQAIKT
LLQRTVDLLRKFNCRLKDMLSDDFESWLKSIDDRVQELKSGECNGEIFNK
KCITNLQNYIPQLAEIQVRSDQPLYILNKYDCGLTPEEKKDFENRLLGLK
QQAGALIKVIQDCLKRFFDIKISKMNLIKDSLQKRIKTAGQLWIDTIFLE
NRYVGKEIEALAKLFGSYQSDLQELKDEMKIVKDCLRQAQNFLTSENYQQ
CTQTFDGLQKESDLLCKNIKLWLQFMEKSMVFFLKQEVEKMEKKFEDLRV
ENHHIFKVLGLNCNSVKYALIGLKVLKPKLETYKEELQLLYRYLDDIKDS
PKEYQELKAKLDTLKGKVEGLCEKVTKYIPFLEFYASFSNCSFVTTTTDP
STLGTTTSGSITPTPPTSGPSTADPPFVTTTTDGSPFSR
Run BLAST on NCBI

transcript from alignment at sc0000130:546556..551620-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00011596 ID=TCONS_00011596|Name=TCONS_00011596|organism=Clytia hemisphaerica|type=transcript|length=5065bp|location=Sequence derived from alignment at sc0000130:546556..551620- (Clytia hemisphaerica)
CAACTTACTGCTCAGAAACAAATAGAACTGACGCAGCAATCTTGAATTAT GTCGAAACTCAAATTTTTGGCCATGCTGACTTTCTTCTACTGCAGTCAAC GGACACACTCGATACCTTTGACAACCTCTACAGAACCACAGGGACCTTTT GCAACTTCGACAAAGCCACAAGGACCTTTCGTAACTGCAACTGAAGTTCA AGGACCTTTCGTAACTACAACAAAGCCACAAGGACCTTTCGTAACTGCAA CTGAAGTTCAAGGACCTTTCGTGACTACAACAAAGCCACAAGGACCTTTC GTAACTACAACTGAAGCTCAAGGACCTTTCGTAACTACAACTGAAGCTCA AGGACCTTTCGTGACTACAACTGAAGCTCAAGGACCTTTAACAACTACGG AATCTTCTGCTATTTACTTTCAAAAGAGGGTTTCTGCTTTCCAAAGTGAA ATAACAACATATGAAAAAGTATTCGGTACGTATTTTCTTCTTCATTCTCT AAGGAAGTTAGTTTCAAAGACAGCTTTCCCAATGAAACTAATTCTTGATG ACGGCAATTTAAGTATAACATTCAAAAGATTCAAAATCAAATATTGCTTC CTGGAAAACCAAAATATTGCTTGCAAATAGTTTCAAGGGAAAAAACATTT TGCTCTTAAACATGAAGAGTGAACACCAGTGTAAAAAGTCATAAATCTGG TATATAGAATGAGTTTTTCATTTGAAAATGTTGAAGAGAAAATATCTTCG AACTTTCAACTCTGAACAAAAAGATCTACTCAGGACCGAGCTCTGGACTT GAAATTCAATGTTGAGCTTTTTCTAGCTAGTTTTTCCTTCAGGTGTCAAC CAAATTCACTAAATCAAATAAAAGCAACATTTTATTATGTATGTAAAACG GGCTTATTTTGTTAAGGTAGTTTTCAATATTTTTGATGGATTTTTTTTGC TTTTAACAGCCAACGAAGTTCTTTCAAAGGAGCAAATTAGTGAACTCATT AAGCGATTGGAAACCTTAAAGGACAAAGAGATGAAAAATGTGGAAACACA ACTTGGTCAGACCATTGAACAGAATGCTGGCAACACACTTTTACTTGAAG AGTTGAAGATGTTTTCACAAGCTATCAAGACTTTACTCCAACGAACTGTT GACTTGTTGAGGAAGTTTAATTGCAGATTGAAAGATATGTTAAGCGATGA TTTTGAATCGTGGTTGAAGAGCATTGATGACAGAGTTCAGGAATTGAAAT CTGGAGAATGCAACGGTGAAAGTAAGTCGTTTTTTGAAAGATTGTTTTCA AAAGCTCTTACCATTTACCTTAGTTTAGCTTTCTCCAAAAGTTAATCGTT TTTAAACTAATCGTTTCTAATCTCTTTGGAATTTGTTTAGAAAATTAAGT CAGTAAATGAGGCCCCAGTGGTAACTCTGATCATGATATCACACACTTTT TTGTCTTCAATAACGATCACGAAAATCAGCAAAAAGATTGGATAATTACT GCAGCTCAACAATTTTTCAAATCACAATCACGTATTGATCTCTGATCACG CAATCACGAAATTACCAATTTTGAATATTTTTTGTATCTTTTTTTATGAT TCTACAGGGTGTCCCTAATTAAAGTATCGAGTTTGGACATGCGGTTGAGT AGAAAAGTTTCGCTAAAATATAAGAACGTTCTCCATCACACAGGCTTATT ACAAAAGGTAGTTACAACGTATAAATTAATCGTAATGACAAAGAAAAAAG AGGGAGAGCTTAGAATACAATTTTGTGAACACGCACATAAAACTTTCTAC TCATAGTTGTGTTTCGACTTGATACTTTAATTAGGGACACCCTGTATGAG GGTCTAAAAGATAAGTTTTAAAAACAATTATTATAGAAACCAGCAGGGCA TTTTGACGAAAGCAAAGCGGATATAAGCGATCGCCCATTGATGATGAACC GATAAATGACTATTTTCTGCGAAGATACTCGCTGTTTTACATTGTGGACC TCTACCTAACGGAATTCAAAAAGTTAATGCTATAACCTTATTTTGCGAAG CAAGGTCCGTCCATGCGTAAATTTTCGCGCCTTATGACTTCTTTGAGTTG CGAAGTATAACTTTTAGTCTAGTAATGCACTGCTTTAGAAGAACGCTACT AACTAGCATAAAACTTAAATGTCTAAACTCATGTTTTTAGTTTTCAACAA AAAATGCATCACCAACTTGCAAAACTACATTCCCCAACTCGCCGAAATCC AAGTTAGAAGTGACCAACCACTTTACATACTGAACAAATACGATTGTGGT TTGACTCCTGAAGAGAAAAAGGACTTCGAAAATCGTCTGTTAGGATTGAA ACAGCAAGCCGGTGCTCTGATCAAGGTCATTCAAGATTGTTTGAAGAGAT TCTTTGACATCAAGATTTCCAAAATGAATTTAATCAAGGATTCTCTGCAG AAGAGAATCAAAACAGCTGGACAACTTTGGATAGGTAAGTGCTCGCATTT CATTGATTTTTTTTGTTTAAAATCATTTCTGGTGAAATTCTTCTTTATTA TAGGACATCAATATTCCCATAGCCATTATCAAAATTTGTATCGAGCTGAT TGTAAATATTCAGTCCCAATAAGGATCACAAAGTTCATACCACATGTATG TATGTAAGATCTTAAATTCCGGACTAATGATAAATGTCAGCATTTCATTT CAAACCTATGACAGGTGCAATAAAATACAAACCCCCCAAAAAGATCTTGT GTATATTTGAGTCCTAGCTATTTTTTCCATGCACATATCAAGCTATCAAC CAAACCTGGGTCACAATTTTTACTGATTTGGTCTTATTCTGACACCCATT AAAGCCTTTAGCCCACTCTCAACGCTTAAGTGATTTTAAAAGAAGGGAAA TTTTAAAACGTCTATTATTACGCATTGAGAAAAAAATTTCAATAATATAT AGCTCGTTTTGATCGTCTTGTTCTAAATTTTCTAAATGTAACAAAAATGT AACGTTTGCTTACTCATCGATTTTAATTTAAAAGCTTTTTCACATTGAAT TGGCACAGAGGTGAAGCAAGATTGGTTAGAAAGAGGAAAAGAAAAAAATC TTTTTGCGTATATAAGTATAATATAACAATAACAAGACACTATCCTGATA TGAAATATGTGTCTGATATGAAACGGAAACACTTATGTAAAAACAAAACC TTTAAGTCTGTCCCCAATCTCAAAGTTATCATTTTGTCTGACTGTACATT TTCTCTCCTCTAGATACCATCTTTCTTGAAAACAGATATGTAGGTAAAGA GATAGAAGCTCTCGCCAAGCTGTTTGGTTCTTATCAAAGTGATCTTCAGG AACTGAAGGATGAAATGAAAATTGTGAAGGATTGTCTCAGACAAGCTCAA AACTTTCTGACATCGGAGAATTATCAACAATGTACACAAACTTTTGATGG TTTGCAGAAGGAATCAGATTTACTGTGCAAAAATATAAAACTTTGGTTAC AATTCATGGAAAAGAGTATGGTATTTTTTTTGAAACAGGAGGTTGAAAAA ATGGAAAAGAAATTTGAAGATTTGAGAGTGGAAAATCACCATATCTTCAA AGGTGATTTCTGTTGGTCCAAACAATATTTTCTAGTTTTCTTTATCTTTA GACAATTTTAATCCAAAGAGGATTATCTTGAATTTTGAAATTCAAAATGC TGTCCTCCCGACTAAAAGATGAAAAATATTTTTCTTATGTCAGGTCTATG GCTGTAATAATGAAAGTGACGGCTTTTTGAAGTATACTTTGCTAAACTTT TGATCACAGTTTAAATTTACTAGGGCCGCACAACTGAGAAAATCTATTTA TTCTTGTTTTAATAATTATTTCAGTCCTTGGACTTAATTGCAACTCAGTC AAATATGCTCTGATTGGTTTGAAAGTGCTGAAACCAAAACTTGAGACGTA CAAAGAAGAGCTCCAGTTGTTGTATCGGTATCTCGATGACATCAAAGACT CTCCTAAAGAGTATCAGGAGTTGAAAGCTAAGCTAGACACATTGAAAGGA AAAGTTGAAGGACTTTGTGAAAAAGTTACAAAATACATTCCTTTCCTTGA GTTTTATGCCAGCTTTTCGAATTGTAAGTTTTTTTTATCTCTTATAACAT TTACTTTGATGCCAGTTAGGGCGTTAAGGGTGTTAAGGTTCGACGCAAAG AAAAGCTCAAAATAGGAGTGAAATATGAATCAGTGGACAAAAAACGAGAG ACAGGTTAAGAGATTTTTCAGAGCTACCTGTTGCTAACCTTTATAAATTG GAAAAACTTAGAAGCTCATGTATCTACTGTCAAGTAACCCATTCGGCACA CAACGTTGTTTCAACGTTTATCTAACGTTTACAACGTCCATATAACGTTA GATGAACGTTGAAACAATGTTATGTGCCAGCTGGGAACTGACGCATATCA TATCTTTTAAATGCTTATTTTAGGTTCTTTTGTCACAACGACTACTGACC CGTCAACACTTGGTACCACCACTTCTGGATCAATAACGCCTACACCACCA ACATCTGGTCCATCAACGGCCGACCCACCCTTCGTTACCACGACGACAGA TGGATCTCCGTTTAGTCGTTAAACGGTGTGACGGTGTGACGGTGCAAGTG GTTGGTCAATATTGGATGGTGATTGAATTTATTTGATTTTTTATTCGCCT GGCGAATTTGTATTTAATTCAATCTGTTACGAAACGTGGTAGGAAAATTG CCTCGTGGAACAATTCAACCCAGACTATTCCCCAACTTGGACTTTTGGTC CCAGGACAACCCCCCCTCAAACAATTACTTCCGGACAATTAGGTCTATTG ATATTCCCATCATAGAAAAAAAATGTCATCTTACACTTTTTAATTTTCAA CTAAAGGTCGATTTATTCTTTTCAATTCTCTCTTGATTATGTAACAGTGA GATAGAATCAACGAAGACAATTTTAGACAAAAAATCGAATGGTAGCTAGA TCTAGCGCTTCAGGTGATCAAAAAAATTCTATTTTTCGAATCTTCTTCTT TCCAAGATAGCGCTC

Coding sequence (CDS) from alignment at sc0000130:546556..551620-

>TCONS_00011596 ID=TCONS_00011596|Name=TCONS_00011596|organism=Clytia hemisphaerica|type=CDS|length=10620bp|location=Sequence derived from alignment at sc0000130:546556..551620- (Clytia hemisphaerica)
GTTCTTTTGTCACAACGACTACTGACCCGTCAACACTTGGTACCACCACT
TCTGGATCAATAACGCCTACACCACCAACATCTGGTCCATCAACGGCCGA
CCCACCCTTCGTTACCACGACGACAGATGGATCTCCGTTTAGTCGTTAAT
CCTTGGACTTAATTGCAACTCAGTCAAATATGCTCTGATTGGTTTGAAAG
TGCTGAAACCAAAACTTGAGACGTACAAAGAAGAGCTCCAGTTGTTGTAT
CGGTATCTCGATGACATCAAAGACTCTCCTAAAGAGTATCAGGAGTTGAA
AGCTAAGCTAGACACATTGAAAGGAAAAGTTGAAGGACTTTGTGAAAAAG
TTACAAAATACATTCCTTTCCTTGAGTTTTATGCCAGCTTTTCGAATTAT
ACCATCTTTCTTGAAAACAGATATGTAGGTAAAGAGATAGAAGCTCTCGC
CAAGCTGTTTGGTTCTTATCAAAGTGATCTTCAGGAACTGAAGGATGAAA
TGAAAATTGTGAAGGATTGTCTCAGACAAGCTCAAAACTTTCTGACATCG
GAGAATTATCAACAATGTACACAAACTTTTGATGGTTTGCAGAAGGAATC
AGATTTACTGTGCAAAAATATAAAACTTTGGTTACAATTCATGGAAAAGA
GTATGGTATTTTTTTTGAAACAGGAGGTTGAAAAAATGGAAAAGAAATTT
GAAGATTTGAGAGTGGAAAATCACCATATCTTCAAAGTTTTCAACAAAAA
ATGCATCACCAACTTGCAAAACTACATTCCCCAACTCGCCGAAATCCAAG
TTAGAAGTGACCAACCACTTTACATACTGAACAAATACGATTGTGGTTTG
ACTCCTGAAGAGAAAAAGGACTTCGAAAATCGTCTGTTAGGATTGAAACA
GCAAGCCGGTGCTCTGATCAAGGTCATTCAAGATTGTTTGAAGAGATTCT
TTGACATCAAGATTTCCAAAATGAATTTAATCAAGGATTCTCTGCAGAAG
AGAATCAAAACAGCTGGACAACTTTGGATAGCCAACGAAGTTCTTTCAAA
GGAGCAAATTAGTGAACTCATTAAGCGATTGGAAACCTTAAAGGACAAAG
AGATGAAAAATGTGGAAACACAACTTGGTCAGACCATTGAACAGAATGCT
GGCAACACACTTTTACTTGAAGAGTTGAAGATGTTTTCACAAGCTATCAA
GACTTTACTCCAACGAACTGTTGACTTGTTGAGGAAGTTTAATTGCAGAT
TGAAAGATATGTTAAGCGATGATTTTGAATCGTGGTTGAAGAGCATTGAT
GACAGAGTTCAGGAATTGAAATCTGGAGAATGCAACGGTGAAAATGTCGA
AACTCAAATTTTTGGCCATGCTGACTTTCTTCTACTGCAGTCAACGGACA
CACTCGATACCTTTGACAACCTCTACAGAACCACAGGGACCTTTTGCAAC
TTCGACAAAGCCACAAGGACCTTTCGTAACTGCAACTGAAGTTCAAGGAC
CTTTCGTAACTACAACAAAGCCACAAGGACCTTTCGTAACTGCAACTGAA
GTTCAAGGACCTTTCGTGACTACAACAAAGCCACAAGGACCTTTCGTAAC
TACAACTGAAGCTCAAGGACCTTTCGTAACTACAACTGAAGCTCAAGGAC
CTTTCGTGACTACAACTGAAGCTCAAGGACCTTTAACAACTACGGAATCT
TCTGCTATTTACTTTCAAAAGAGGGTTTCTGCTTTCCAAAGTGAAATAAC
AACATATGAAAAAGTATTCGGTTCTTTTGTCACAACGACTACTGACCCGT
CAACACTTGGTACCACCACTTCTGGATCAATAACGCCTACACCACCAACA
TCTGGTCCATCAACGGCCGACCCACCCTTCGTTACCACGACGACAGATGG
ATCTCCGTTTAGTCGTTAATCCTTGGACTTAATTGCAACTCAGTCAAATA
TGCTCTGATTGGTTTGAAAGTGCTGAAACCAAAACTTGAGACGTACAAAG
AAGAGCTCCAGTTGTTGTATCGGTATCTCGATGACATCAAAGACTCTCCT
AAAGAGTATCAGGAGTTGAAAGCTAAGCTAGACACATTGAAAGGAAAAGT
TGAAGGACTTTGTGAAAAAGTTACAAAATACATTCCTTTCCTTGAGTTTT
ATGCCAGCTTTTCGAATTATACCATCTTTCTTGAAAACAGATATGTAGGT
AAAGAGATAGAAGCTCTCGCCAAGCTGTTTGGTTCTTATCAAAGTGATCT
TCAGGAACTGAAGGATGAAATGAAAATTGTGAAGGATTGTCTCAGACAAG
CTCAAAACTTTCTGACATCGGAGAATTATCAACAATGTACACAAACTTTT
GATGGTTTGCAGAAGGAATCAGATTTACTGTGCAAAAATATAAAACTTTG
GTTACAATTCATGGAAAAGAGTATGGTATTTTTTTTGAAACAGGAGGTTG
AAAAAATGGAAAAGAAATTTGAAGATTTGAGAGTGGAAAATCACCATATC
TTCAAAGTTTTCAACAAAAAATGCATCACCAACTTGCAAAACTACATTCC
CCAACTCGCCGAAATCCAAGTTAGAAGTGACCAACCACTTTACATACTGA
ACAAATACGATTGTGGTTTGACTCCTGAAGAGAAAAAGGACTTCGAAAAT
CGTCTGTTAGGATTGAAACAGCAAGCCGGTGCTCTGATCAAGGTCATTCA
AGATTGTTTGAAGAGATTCTTTGACATCAAGATTTCCAAAATGAATTTAA
TCAAGGATTCTCTGCAGAAGAGAATCAAAACAGCTGGACAACTTTGGATA
GCCAACGAAGTTCTTTCAAAGGAGCAAATTAGTGAACTCATTAAGCGATT
GGAAACCTTAAAGGACAAAGAGATGAAAAATGTGGAAACACAACTTGGTC
AGACCATTGAACAGAATGCTGGCAACACACTTTTACTTGAAGAGTTGAAG
ATGTTTTCACAAGCTATCAAGACTTTACTCCAACGAACTGTTGACTTGTT
GAGGAAGTTTAATTGCAGATTGAAAGATATGTTAAGCGATGATTTTGAAT
CGTGGTTGAAGAGCATTGATGACAGAGTTCAGGAATTGAAATCTGGAGAA
TGCAACGGTGAAAATGTCGAAACTCAAATTTTTGGCCATGCTGACTTTCT
TCTACTGCAGTCAACGGACACACTCGATACCTTTGACAACCTCTACAGAA
CCACAGGGACCTTTTGCAACTTCGACAAAGCCACAAGGACCTTTCGTAAC
TGCAACTGAAGTTCAAGGACCTTTCGTAACTACAACAAAGCCACAAGGAC
CTTTCGTAACTGCAACTGAAGTTCAAGGACCTTTCGTGACTACAACAAAG
CCACAAGGACCTTTCGTAACTACAACTGAAGCTCAAGGACCTTTCGTAAC
TACAACTGAAGCTCAAGGACCTTTCGTGACTACAACTGAAGCTCAAGGAC
CTTTAACAACTACGGAATCTTCTGCTATTTACTTTCAAAAGAGGGTTTCT
GCTTTCCAAAGTGAAATAACAACATATGAAAAAGTATTCGGTTCTTTTGT
CACAACGACTACTGACCCGTCAACACTTGGTACCACCACTTCTGGATCAA
TAACGCCTACACCACCAACATCTGGTCCATCAACGGCCGACCCACCCTTC
GTTACCACGACGACAGATGGATCTCCGTTTAGTCGTTAATCCTTGGACTT
AATTGCAACTCAGTCAAATATGCTCTGATTGGTTTGAAAGTGCTGAAACC
AAAACTTGAGACGTACAAAGAAGAGCTCCAGTTGTTGTATCGGTATCTCG
ATGACATCAAAGACTCTCCTAAAGAGTATCAGGAGTTGAAAGCTAAGCTA
GACACATTGAAAGGAAAAGTTGAAGGACTTTGTGAAAAAGTTACAAAATA
CATTCCTTTCCTTGAGTTTTATGCCAGCTTTTCGAATTATACCATCTTTC
TTGAAAACAGATATGTAGGTAAAGAGATAGAAGCTCTCGCCAAGCTGTTT
GGTTCTTATCAAAGTGATCTTCAGGAACTGAAGGATGAAATGAAAATTGT
GAAGGATTGTCTCAGACAAGCTCAAAACTTTCTGACATCGGAGAATTATC
AACAATGTACACAAACTTTTGATGGTTTGCAGAAGGAATCAGATTTACTG
TGCAAAAATATAAAACTTTGGTTACAATTCATGGAAAAGAGTATGGTATT
TTTTTTGAAACAGGAGGTTGAAAAAATGGAAAAGAAATTTGAAGATTTGA
GAGTGGAAAATCACCATATCTTCAAAGTTTTCAACAAAAAATGCATCACC
AACTTGCAAAACTACATTCCCCAACTCGCCGAAATCCAAGTTAGAAGTGA
CCAACCACTTTACATACTGAACAAATACGATTGTGGTTTGACTCCTGAAG
AGAAAAAGGACTTCGAAAATCGTCTGTTAGGATTGAAACAGCAAGCCGGT
GCTCTGATCAAGGTCATTCAAGATTGTTTGAAGAGATTCTTTGACATCAA
GATTTCCAAAATGAATTTAATCAAGGATTCTCTGCAGAAGAGAATCAAAA
CAGCTGGACAACTTTGGATAGCCAACGAAGTTCTTTCAAAGGAGCAAATT
AGTGAACTCATTAAGCGATTGGAAACCTTAAAGGACAAAGAGATGAAAAA
TGTGGAAACACAACTTGGTCAGACCATTGAACAGAATGCTGGCAACACAC
TTTTACTTGAAGAGTTGAAGATGTTTTCACAAGCTATCAAGACTTTACTC
CAACGAACTGTTGACTTGTTGAGGAAGTTTAATTGCAGATTGAAAGATAT
GTTAAGCGATGATTTTGAATCGTGGTTGAAGAGCATTGATGACAGAGTTC
AGGAATTGAAATCTGGAGAATGCAACGGTGAAAATGTCGAAACTCAAATT
TTTGGCCATGCTGACTTTCTTCTACTGCAGTCAACGGACACACTCGATAC
CTTTGACAACCTCTACAGAACCACAGGGACCTTTTGCAACTTCGACAAAG
CCACAAGGACCTTTCGTAACTGCAACTGAAGTTCAAGGACCTTTCGTAAC
TACAACAAAGCCACAAGGACCTTTCGTAACTGCAACTGAAGTTCAAGGAC
CTTTCGTGACTACAACAAAGCCACAAGGACCTTTCGTAACTACAACTGAA
GCTCAAGGACCTTTCGTAACTACAACTGAAGCTCAAGGACCTTTCGTGAC
TACAACTGAAGCTCAAGGACCTTTAACAACTACGGAATCTTCTGCTATTT
ACTTTCAAAAGAGGGTTTCTGCTTTCCAAAGTGAAATAACAACATATGAA
AAAGTATTCGGTTCTTTTGTCACAACGACTACTGACCCGTCAACACTTGG
TACCACCACTTCTGGATCAATAACGCCTACACCACCAACATCTGGTCCAT
CAACGGCCGACCCACCCTTCGTTACCACGACGACAGATGGATCTCCGTTT
AGTCGTTAATCCTTGGACTTAATTGCAACTCAGTCAAATATGCTCTGATT
GGTTTGAAAGTGCTGAAACCAAAACTTGAGACGTACAAAGAAGAGCTCCA
GTTGTTGTATCGGTATCTCGATGACATCAAAGACTCTCCTAAAGAGTATC
AGGAGTTGAAAGCTAAGCTAGACACATTGAAAGGAAAAGTTGAAGGACTT
TGTGAAAAAGTTACAAAATACATTCCTTTCCTTGAGTTTTATGCCAGCTT
TTCGAATTATACCATCTTTCTTGAAAACAGATATGTAGGTAAAGAGATAG
AAGCTCTCGCCAAGCTGTTTGGTTCTTATCAAAGTGATCTTCAGGAACTG
AAGGATGAAATGAAAATTGTGAAGGATTGTCTCAGACAAGCTCAAAACTT
TCTGACATCGGAGAATTATCAACAATGTACACAAACTTTTGATGGTTTGC
AGAAGGAATCAGATTTACTGTGCAAAAATATAAAACTTTGGTTACAATTC
ATGGAAAAGAGTATGGTATTTTTTTTGAAACAGGAGGTTGAAAAAATGGA
AAAGAAATTTGAAGATTTGAGAGTGGAAAATCACCATATCTTCAAAGTTT
TCAACAAAAAATGCATCACCAACTTGCAAAACTACATTCCCCAACTCGCC
GAAATCCAAGTTAGAAGTGACCAACCACTTTACATACTGAACAAATACGA
TTGTGGTTTGACTCCTGAAGAGAAAAAGGACTTCGAAAATCGTCTGTTAG
GATTGAAACAGCAAGCCGGTGCTCTGATCAAGGTCATTCAAGATTGTTTG
AAGAGATTCTTTGACATCAAGATTTCCAAAATGAATTTAATCAAGGATTC
TCTGCAGAAGAGAATCAAAACAGCTGGACAACTTTGGATAGCCAACGAAG
TTCTTTCAAAGGAGCAAATTAGTGAACTCATTAAGCGATTGGAAACCTTA
AAGGACAAAGAGATGAAAAATGTGGAAACACAACTTGGTCAGACCATTGA
ACAGAATGCTGGCAACACACTTTTACTTGAAGAGTTGAAGATGTTTTCAC
AAGCTATCAAGACTTTACTCCAACGAACTGTTGACTTGTTGAGGAAGTTT
AATTGCAGATTGAAAGATATGTTAAGCGATGATTTTGAATCGTGGTTGAA
GAGCATTGATGACAGAGTTCAGGAATTGAAATCTGGAGAATGCAACGGTG
AAAATGTCGAAACTCAAATTTTTGGCCATGCTGACTTTCTTCTACTGCAG
TCAACGGACACACTCGATACCTTTGACAACCTCTACAGAACCACAGGGAC
CTTTTGCAACTTCGACAAAGCCACAAGGACCTTTCGTAACTGCAACTGAA
GTTCAAGGACCTTTCGTAACTACAACAAAGCCACAAGGACCTTTCGTAAC
TGCAACTGAAGTTCAAGGACCTTTCGTGACTACAACAAAGCCACAAGGAC
CTTTCGTAACTACAACTGAAGCTCAAGGACCTTTCGTAACTACAACTGAA
GCTCAAGGACCTTTCGTGACTACAACTGAAGCTCAAGGACCTTTAACAAC
TACGGAATCTTCTGCTATTTACTTTCAAAAGAGGGTTTCTGCTTTCCAAA
GTGAAATAACAACATATGAAAAAGTATTCGGTTCTTTTGTCACAACGACT
ACTGACCCGTCAACACTTGGTACCACCACTTCTGGATCAATAACGCCTAC
ACCACCAACATCTGGTCCATCAACGGCCGACCCACCCTTCGTTACCACGA
CGACAGATGGATCTCCGTTTAGTCGTTAATCCTTGGACTTAATTGCAACT
CAGTCAAATATGCTCTGATTGGTTTGAAAGTGCTGAAACCAAAACTTGAG
ACGTACAAAGAAGAGCTCCAGTTGTTGTATCGGTATCTCGATGACATCAA
AGACTCTCCTAAAGAGTATCAGGAGTTGAAAGCTAAGCTAGACACATTGA
AAGGAAAAGTTGAAGGACTTTGTGAAAAAGTTACAAAATACATTCCTTTC
CTTGAGTTTTATGCCAGCTTTTCGAATTATACCATCTTTCTTGAAAACAG
ATATGTAGGTAAAGAGATAGAAGCTCTCGCCAAGCTGTTTGGTTCTTATC
AAAGTGATCTTCAGGAACTGAAGGATGAAATGAAAATTGTGAAGGATTGT
CTCAGACAAGCTCAAAACTTTCTGACATCGGAGAATTATCAACAATGTAC
ACAAACTTTTGATGGTTTGCAGAAGGAATCAGATTTACTGTGCAAAAATA
TAAAACTTTGGTTACAATTCATGGAAAAGAGTATGGTATTTTTTTTGAAA
CAGGAGGTTGAAAAAATGGAAAAGAAATTTGAAGATTTGAGAGTGGAAAA
TCACCATATCTTCAAAGTTTTCAACAAAAAATGCATCACCAACTTGCAAA
ACTACATTCCCCAACTCGCCGAAATCCAAGTTAGAAGTGACCAACCACTT
TACATACTGAACAAATACGATTGTGGTTTGACTCCTGAAGAGAAAAAGGA
CTTCGAAAATCGTCTGTTAGGATTGAAACAGCAAGCCGGTGCTCTGATCA
AGGTCATTCAAGATTGTTTGAAGAGATTCTTTGACATCAAGATTTCCAAA
ATGAATTTAATCAAGGATTCTCTGCAGAAGAGAATCAAAACAGCTGGACA
ACTTTGGATAGCCAACGAAGTTCTTTCAAAGGAGCAAATTAGTGAACTCA
TTAAGCGATTGGAAACCTTAAAGGACAAAGAGATGAAAAATGTGGAAACA
CAACTTGGTCAGACCATTGAACAGAATGCTGGCAACACACTTTTACTTGA
AGAGTTGAAGATGTTTTCACAAGCTATCAAGACTTTACTCCAACGAACTG
TTGACTTGTTGAGGAAGTTTAATTGCAGATTGAAAGATATGTTAAGCGAT
GATTTTGAATCGTGGTTGAAGAGCATTGATGACAGAGTTCAGGAATTGAA
ATCTGGAGAATGCAACGGTGAAAATGTCGAAACTCAAATTTTTGGCCATG
CTGACTTTCTTCTACTGCAGTCAACGGACACACTCGATACCTTTGACAAC
CTCTACAGAACCACAGGGACCTTTTGCAACTTCGACAAAGCCACAAGGAC
CTTTCGTAACTGCAACTGAAGTTCAAGGACCTTTCGTAACTACAACAAAG
CCACAAGGACCTTTCGTAACTGCAACTGAAGTTCAAGGACCTTTCGTGAC
TACAACAAAGCCACAAGGACCTTTCGTAACTACAACTGAAGCTCAAGGAC
CTTTCGTAACTACAACTGAAGCTCAAGGACCTTTCGTGACTACAACTGAA
GCTCAAGGACCTTTAACAACTACGGAATCTTCTGCTATTTACTTTCAAAA
GAGGGTTTCTGCTTTCCAAAGTGAAATAACAACATATGAAAAAGTATTCG
GTTCTTTTGTCACAACGACTACTGACCCGTCAACACTTGGTACCACCACT
TCTGGATCAATAACGCCTACACCACCAACATCTGGTCCATCAACGGCCGA
CCCACCCTTCGTTACCACGACGACAGATGGATCTCCGTTTAGTCGTTAAT
CCTTGGACTTAATTGCAACTCAGTCAAATATGCTCTGATTGGTTTGAAAG
TGCTGAAACCAAAACTTGAGACGTACAAAGAAGAGCTCCAGTTGTTGTAT
CGGTATCTCGATGACATCAAAGACTCTCCTAAAGAGTATCAGGAGTTGAA
AGCTAAGCTAGACACATTGAAAGGAAAAGTTGAAGGACTTTGTGAAAAAG
TTACAAAATACATTCCTTTCCTTGAGTTTTATGCCAGCTTTTCGAATTAT
ACCATCTTTCTTGAAAACAGATATGTAGGTAAAGAGATAGAAGCTCTCGC
CAAGCTGTTTGGTTCTTATCAAAGTGATCTTCAGGAACTGAAGGATGAAA
TGAAAATTGTGAAGGATTGTCTCAGACAAGCTCAAAACTTTCTGACATCG
GAGAATTATCAACAATGTACACAAACTTTTGATGGTTTGCAGAAGGAATC
AGATTTACTGTGCAAAAATATAAAACTTTGGTTACAATTCATGGAAAAGA
GTATGGTATTTTTTTTGAAACAGGAGGTTGAAAAAATGGAAAAGAAATTT
GAAGATTTGAGAGTGGAAAATCACCATATCTTCAAAGTTTTCAACAAAAA
ATGCATCACCAACTTGCAAAACTACATTCCCCAACTCGCCGAAATCCAAG
TTAGAAGTGACCAACCACTTTACATACTGAACAAATACGATTGTGGTTTG
ACTCCTGAAGAGAAAAAGGACTTCGAAAATCGTCTGTTAGGATTGAAACA
GCAAGCCGGTGCTCTGATCAAGGTCATTCAAGATTGTTTGAAGAGATTCT
TTGACATCAAGATTTCCAAAATGAATTTAATCAAGGATTCTCTGCAGAAG
AGAATCAAAACAGCTGGACAACTTTGGATAGCCAACGAAGTTCTTTCAAA
GGAGCAAATTAGTGAACTCATTAAGCGATTGGAAACCTTAAAGGACAAAG
AGATGAAAAATGTGGAAACACAACTTGGTCAGACCATTGAACAGAATGCT
GGCAACACACTTTTACTTGAAGAGTTGAAGATGTTTTCACAAGCTATCAA
GACTTTACTCCAACGAACTGTTGACTTGTTGAGGAAGTTTAATTGCAGAT
TGAAAGATATGTTAAGCGATGATTTTGAATCGTGGTTGAAGAGCATTGAT
GACAGAGTTCAGGAATTGAAATCTGGAGAATGCAACGGTGAAAATGTCGA
AACTCAAATTTTTGGCCATGCTGACTTTCTTCTACTGCAGTCAACGGACA
CACTCGATACCTTTGACAACCTCTACAGAACCACAGGGACCTTTTGCAAC
TTCGACAAAGCCACAAGGACCTTTCGTAACTGCAACTGAAGTTCAAGGAC
CTTTCGTAACTACAACAAAGCCACAAGGACCTTTCGTAACTGCAACTGAA
GTTCAAGGACCTTTCGTGACTACAACAAAGCCACAAGGACCTTTCGTAAC
TACAACTGAAGCTCAAGGACCTTTCGTAACTACAACTGAAGCTCAAGGAC
CTTTCGTGACTACAACTGAAGCTCAAGGACCTTTAACAACTACGGAATCT
TCTGCTATTTACTTTCAAAAGAGGGTTTCTGCTTTCCAAAGTGAAATAAC
AACATATGAAAAAGTATTCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006495XLOC_006495Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011596-proteinTCONS_00011596-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011596-exon-sc0000130-1575043694:551146..551620TCONS_00011596-exon-sc0000130-1575043694:551146..551620Clytia hemisphaericaexon
TCONS_00011596-exon-sc0000130-1575043694:550350..550661TCONS_00011596-exon-sc0000130-1575043694:550350..550661Clytia hemisphaericaexon
TCONS_00011596-exon-sc0000130-1575043694:549137..549430TCONS_00011596-exon-sc0000130-1575043694:549137..549430Clytia hemisphaericaexon
TCONS_00011596-exon-sc0000130-1575043694:548019..548357TCONS_00011596-exon-sc0000130-1575043694:548019..548357Clytia hemisphaericaexon
TCONS_00011596-exon-sc0000130-1575043694:547498..547746TCONS_00011596-exon-sc0000130-1575043694:547498..547746Clytia hemisphaericaexon
TCONS_00011596-exon-sc0000130-1575043694:546556..547147TCONS_00011596-exon-sc0000130-1575043694:546556..547147Clytia hemisphaericaexon
TCONS_00011596-exon-sc0000130-1510915933:551146..551620TCONS_00011596-exon-sc0000130-1510915933:551146..551620Clytia hemisphaericaexon
TCONS_00011596-exon-sc0000130-1510915933:550350..550661TCONS_00011596-exon-sc0000130-1510915933:550350..550661Clytia hemisphaericaexon
TCONS_00011596-exon-sc0000130-1510915933:549137..549430TCONS_00011596-exon-sc0000130-1510915933:549137..549430Clytia hemisphaericaexon
TCONS_00011596-exon-sc0000130-1510915933:548019..548357TCONS_00011596-exon-sc0000130-1510915933:548019..548357Clytia hemisphaericaexon
TCONS_00011596-exon-sc0000130-1510915933:547498..547746TCONS_00011596-exon-sc0000130-1510915933:547498..547746Clytia hemisphaericaexon
TCONS_00011596-exon-sc0000130-1510915933:546556..547147TCONS_00011596-exon-sc0000130-1510915933:546556..547147Clytia hemisphaericaexon
TCONS_00011596-exon-sc0000130-1491911889:551146..551620TCONS_00011596-exon-sc0000130-1491911889:551146..551620Clytia hemisphaericaexon
TCONS_00011596-exon-sc0000130-1491911889:550350..550661TCONS_00011596-exon-sc0000130-1491911889:550350..550661Clytia hemisphaericaexon
TCONS_00011596-exon-sc0000130-1491911889:549137..549430TCONS_00011596-exon-sc0000130-1491911889:549137..549430Clytia hemisphaericaexon
TCONS_00011596-exon-sc0000130-1491911889:548019..548357TCONS_00011596-exon-sc0000130-1491911889:548019..548357Clytia hemisphaericaexon
TCONS_00011596-exon-sc0000130-1491911889:547498..547746TCONS_00011596-exon-sc0000130-1491911889:547498..547746Clytia hemisphaericaexon
TCONS_00011596-exon-sc0000130-1491911889:546556..547147TCONS_00011596-exon-sc0000130-1491911889:546556..547147Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000130supercontigsc0000130:546556..551620 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.207472 0.404636 0.254487 0.153216 0.676154 0.921217 0.311195 0.582673 0.0437082 0.0541397 0.0350329 0.0230292 9.83131 7.32009 0.186532 0.231784 23.1157 16.3495 18.673 9.0007 0.551639 1.17412 0.158589 0.0360451 0.0556884 0.0331337 0.16595 0.101204 0.0575695 0.13686
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00011596 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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