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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00011609 ID=TCONS_00011609|Name=TCONS_00011609|organism=Clytia hemisphaerica|type=transcript|length=1547bp
GATTCTGAATCGGCAtctgaatttattttattattgaaatttATTTCCCA
GGCCCGGCCGGCGGAAGCAGGGAGACTGAGGAGACTTtggcctccccact
tttgagtaaatgagtttttttctcaaattcttaGCACAtattatctcatt
ttgagcctgcAGTCTCCCCACTTTAACGTCTTCTCCGGTGGGCCTGTCTC
CTACAGAAATCGTGAAACTCATGAGATATCTAAATTCGTGATTTGAATTT
TTCAGACGTCAAAAGCTTGAAATTAAAAGCGAAAGAAATGATGAAGGAAG
AAGTGAATAGAATAAAGTTTAATGACACAGGCGGTGAGAACGGCTCAATA
AGTAACTCCCGACTAAAGTCCTCAACAGCAATATTTATATTTGTCCCCGG
ATTAGTTCAGGATCCCAAGCTATAATTGGAAGAGAACCGGTTAGGTATCA
TAGAATTCAAAGCACGATATGAACAAAGAATTGGAAGTTAACGggttaaa
aatatctttccataAACCAAGTAATTcgtaaaacaaaataaagtcaTTAG
TATAATCTTTGTACAAGTTCTAGTCAGCCATTTCACCTAAGCTTTATTTA
ATCCATATACGCATATGCGTCCATNCTCCGCTGTTGGCTTCAGCGGAGTT
CTCTGCTTCATTTAATCCATATACGCATATGCGTCCATATACGACTTGTC
AATTGTACAATTACAGTGTCAAACAATAAATCTTCCCAAATAGGAAGAAC
CTTCCTCGTTGAGAGGTAGTTTGAAAGACCctgtttttttctgtttctcG
AGTTTATATTCTCAGGTGAAATAAGAATTTATGCCTAGTGGCATTCAAAA
GTTCATCTCGTGACATTAATGATAAAGAAGTAAAAAGTGTAATaatgtaa
ataaaattaaaatgataATATTAATTAATTGTTGTCTTCCTTATAATAGG
AAATACGTGGTGATAGTCTATCCCATAGGAAGCATTGACCAATGTGAGGA
CGGTCGCACAACTTAGGCCCATTGGGGAAGCACGGCACACGGAAGGGCTC
GTATGAGTCGGAGAATTCGAGAATCAAGGTGAATCCAATGATGGTCTCGA
CGACCAGCCGTGGAAGATTGGTCCCAGAGATGGCACTTCGCAGCTCTTGT
AACCGCAATGCCAACTCACCAGTGACCAGGTTTTTCGTTCCCGTGGCCAG
GCGTAGCGTTGTAAGCATCACCCCTTCATCCATCCAGCTGGTTTCATCAT
TCTTAAGATGTAAGAAtgaataaaataagaataaatgaAGAATTTATTTC
ATTATCTTCATTAATTTATTTGTACCAGAAATTGTTGACAAGTCTTTATT
AATAAACGAATAATATATACGAAATTATTGATTTAAATTTTAATAAGAAC
AGAAGAATAACGAAAATTTCAGCTGAATCTTATCCAGATGAAATCTACTT
TGCAAAGAAGGTTGATCCAGATAGTTTTATGCCACTAATTCTAATCATTC
ATATTCAGCATTCACTTAAATTCCTGTTCATTCACAATTAATCATCC Run BLAST on NCBI transcript from alignment at sc0000130:97054..98600 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00011609 ID=TCONS_00011609|Name=TCONS_00011609|organism=Clytia hemisphaerica|type=transcript|length=1547bp|location=Sequence derived from alignment at sc0000130:97054..98600 (Clytia hemisphaerica)
GGATGATTAATTGTGAATGAACAGGAATTTAAGTGAATGCTGAATATGAA
TGATTAGAATTAGTGGCATAAAACTATCTGGATCAACCTTCTTTGCAAAG
TAGATTTCATCTGGATAAGATTCAGCTGAAATTTTCGTTATTCTTCTGTT
CTTATTAAAATTTAAATCAATAATTTCGTATATATTATTCGTTTATTAAT
AAAGACTTGTCAACAATTTCTGGTACAAATAAATTAATGAAGATAATGAA
ATAAATTCTtcatttattcttattttattcaTTCTTACATCTTAAGAATG
ATGAAACCAGCTGGATGGATGAAGGGGTGATGCTTACAACGCTACGCCTG
GCCACGGGAACGAAAAACCTGGTCACTGGTGAGTTGGCATTGCGGTTACA
AGAGCTGCGAAGTGCCATCTCTGGGACCAATCTTCCACGGCTGGTCGTCG
AGACCATCATTGGATTCACCTTGATTCTCGAATTCTCCGACTCATACGAG
CCCTTCCGTGTGCCGTGCTTCCCCAATGGGCCTAAGTTGTGCGACCGTCC
TCACATTGGTCAATGCTTCCTATGGGATAGACTATCACCACGTATTTCCT
ATTATAAGGAAGACAACAATTAATTAATATtatcattttaattttattta
cattATTACACTTTTTACTTCTTTATCATTAATGTCACGAGATGAACTTT
TGAATGCCACTAGGCATAAATTCTTATTTCACCTGAGAATATAAACTCga
gaaacagaaaaaaacagGGTCTTTCAAACTACCTCTCAACGAGGAAGGTT
CTTCCTATTTGGGAAGATTTATTGTTTGACACTGTAATTGTACAATTGAC
AAGTCGTATATGGACGCATATGCGTATATGGATTAAATGAAGCAGAGAAC
TCCGCTGAAGCCAACAGCGGAGNATGGACGCATATGCGTATATGGATTAA
ATAAAGCTTAGGTGAAATGGCTGACTAGAACTTGTACAAAGATTATACTA
AtgactttattttgttttacgAATTACTTGGTTtatggaaagatattttt
aaccCGTTAACTTCCAATTCTTTGTTCATATCGTGCTTTGAATTCTATGA
TACCTAACCGGTTCTCTTCCAATTATAGCTTGGGATCCTGAACTAATCCG
GGGACAAATATAAATATTGCTGTTGAGGACTTTAGTCGGGAGTTACTTAT
TGAGCCGTTCTCACCGCCTGTGTCATTAAACTTTATTCTATTCACTTCTT
CCTTCATCATTTCTTTCGCTTTTAATTTCAAGCTTTTGACGTCTGAAAAA
TTCAAATCACGAATTTAGATATCTCATGAGTTTCACGATTTCTGTAGGAG
ACAGGCCCACCGGAGAAGACGTTAAAGTGGGGAGACTgcaggctcaaaat
gagataataTGTGCtaagaatttgagaaaaaaactcatttactcaaaagt
ggggaggccaAAGTCTCCTCAGTCTCCCTGCTTCCGCCGGCCGGGCCTGG
GAAATaaatttcaataataaaataaattcagaTGCCGATTCAGAATC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00011609-exon-sc0000130-1491911889:97054..98600 | TCONS_00011609-exon-sc0000130-1491911889:97054..98600 | Clytia hemisphaerica | exon |
| TCONS_00011609-exon-sc0000130-1510915933:97054..98600 | TCONS_00011609-exon-sc0000130-1510915933:97054..98600 | Clytia hemisphaerica | exon |
| TCONS_00011609-exon-sc0000130-1575043694:97054..98600 | TCONS_00011609-exon-sc0000130-1575043694:97054..98600 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000130 | supercontig | sc0000130:97054..98600 . |
Blast
The following BLAST results are available for this feature:
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