TCONS_00011637 (transcript) - C. hemisphaerica

Overview
NameTCONS_00011637
Unique NameTCONS_00011637
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1967

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00011637 ID=TCONS_00011637|Name=TCONS_00011637|organism=Clytia hemisphaerica|type=transcript|length=1967bp
TTTTAGTTCAAAAttaagaattgattttaaaaaagaaatatgaatCCAAA
AGACAATGGGACGTCAGTGCTTTATAAAAGACCACACTTGATGGCCGCAG
CTACAGGAGCTGCACGAAAGAAACATCCAGTGAAAGCTGTCCTTGCAGGT
GGGATTGCTGGAGGTCTGGAAATATGCTGTACATTTCCAACAGAATATGT
CAAAACACAATTACAATTAGACTCTCGTGCTGAATTTCCAAAATACAAAG
GACCATGGGACTGTGCACGAACTACAGTCAAAGAATTTGGATTCTTTGGA
CTCTATCGTGGTTTGAGTTCACTTTTATATGGATCGATACCCAAAGCTTC
TATTAGGTTTTCAATGTATGAATACTTGAGAAACCAAATGGCAGACTCAA
ACGGCAAACTAACACAGGTTGGAAACTTAACCTGTGGTCTAGGGGCAGGA
GTTGCAGAAGCTATCCTGATTGTTTGTCCTATGGAGACggttaaagtaaa
atttatcCACGACCAAACCCAAGCTAACCCAAAATACAGAGGATTCTTCC
ACGGCGTTTACACCATCGTCAAAACAGACGGTATTCGTGGTACGTACCAA
GGTTTaacggctaccattttgaaacaGGGTAGTAACCAAGCCATtcgatt
ttttgtttataacaaCATGAAGCTTTGGTTACAAGATGGCGACAACACAA
AAGAAATAGGCATGGTTCGCACCTTTGCTATTGGAGGATTAGCTGGAGCT
GCCAGTGTGTTTGGTAATACACCAATCGATGTTGTTAAAACTCGCATGCA
GGGTCTGGAAGCAAATAGATATAAGAACACATGGGACTGTGTGAAAAAGA
CGTGGGCTGAAGAAGGAGCACTAGCattttacaaAGGCACTATCCCGCGT
CTGGGGCGTGTATGTTTCGATGTTGCTTTCGTGTTCACGTTGTACGAACA
AGTAATGAAATTATTAGACTATACATGGGATACTAACTAATGTTCAGCCT
TTGTAAACAGACTGGTATGAACTTTTCAAGTTTTTGCTGGATTCTGTaag
tgattttattttgaattttgtatCGTTTTCTTGAATCTTATGTCATTATT
CGTGGTATGGTGGTATAGTGGCATGCAGTATTTCGTGACAGCGATCCGAA
GGCTTTTCATTCTGCTAAGGTGGCAATTAGGAAAACACCTTTTTCTGTTT
CCAACAATTTTTATGGTTTTTGGCAGCTAGATGTGGATTTGAAATCTGTT
TAATTCTGTGTCCGTTCAGTTCGCTCATATGTATGTTTGTTcgcttttgt
ttttttgtttgctCGTTTGTTAATTTAGCCCATGGCTGTATTTTTagata
tgaaaaaaataatgaataatgattttgtAATTGTAGATAGCTTTAGTTTT
TTTGTAGCCATGTTTCTATCATGAATTCTTCTTGTGAAAGTCACTTTCTC
CTCATCTTGATGGCCCCTGAGTGATTTTCTATACTCGATTATCAATTTTT
CCCTATTTCAGTTGTGANATTCTTTTGTGAAAGTCACTTTCTCTCCATCT
TGATGGCCCCTGAGTGATTTTCTATAATCGATTGatcaatttttcccaat
ttcagttgtgaaatattttttacacaCGCATATACACACCCTTGAGATTT
CAACAGAAAGAAAAGTTCTTCTCAGATATTCATTAAAAGAGCTTGCATGT
TTGGGAGGAGATTTCATCACTTTGAAATCCTCTCACTGAGTTTGAACTGC
GCTTTTAAATGATTATAGGGCAAATTCTAATagtgattttgaaaaaagaa
ctaATTCTAAAGATGAAAATGTATTTTACATATATTTATTAGGTGAaagt
ttagaattttttttcttcagaatatTTTTGTGATATTTGACTTCTAAAAT
TTTATGGCCTTCATTTTTAAAGgtctttcaatttttataacGAAAAGATA
TAAATTTCCAGCATTTC
Run BLAST on NCBI

protein sequence of TCONS_00011637-protein

>TCONS_00011637-protein ID=TCONS_00011637-protein|Name=TCONS_00011637-protein|organism=Clytia hemisphaerica|type=polypeptide|length=316bp
MNPKDNGTSVLYKRPHLMAAATGAARKKHPVKAVLAGGIAGGLEICCTFP
TEYVKTQLQLDSRAEFPKYKGPWDCARTTVKEFGFFGLYRGLSSLLYGSI
PKASIRFSMYEYLRNQMADSNGKLTQVGNLTCGLGAGVAEAILIVCPMET
VKVKFIHDQTQANPKYRGFFHGVYTIVKTDGIRGTYQGLTATILKQGSNQ
AIRFFVYNNMKLWLQDGDNTKEIGMVRTFAIGGLAGAASVFGNTPIDVVK
TRMQGLEANRYKNTWDCVKKTWAEEGALAFYKGTIPRLGRVCFDVAFVFT
LYEQVMKLLDYTWDTN
Run BLAST on NCBI

transcript from alignment at sc0000131:111174..118449+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00011637 ID=TCONS_00011637|Name=TCONS_00011637|organism=Clytia hemisphaerica|type=transcript|length=7276bp|location=Sequence derived from alignment at sc0000131:111174..118449+ (Clytia hemisphaerica)
TTTTAGTTCAAAAttaagaattgattttaaaaaagaaatatgaatCCAAA
AGACAATGGGACGTCAGTGCTTTATAAAAGACCACACTTGATGGCCGCAG
CTACAGGAGCTGCACGAAAGAAACATCCAGTGAAAGCTGTCCTTGCAGGT
AAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNCTAATAGACCTTTTGATTACCCATAATTATCAAGTG
TAATTTCCTTACAAGGTGTGAATACCCATGTTACCATAGGTGTAAGGTAA
ATTATCTCTTGAATTTGCGAGATTACTCATTACTCTTATTTCCATTTTCG
CCTCTCTGTCTGGATGTTAGGTACCCAAATATTGGGTAGAATGTATGAAA
TGGTGTTAATGTGATTCTCATCCTTTTAAGGAATGAATCgtcttttttat
ctttctgtTCTTGGTATAAGCCTCAGTATCTATCACTTTCCTTTCGTCCC
AATTCATTTCATGGTCATTCCCCCAGCAATGATCAGCTATTTCGTTTTTA
TCTGTATCACCATTTCGAACAGCTCTATTATGTTCTTTGTATCTGACACT
GAAAGATCTCTTAGACTCACTGATATAAATATAGCATTACAGTCTTTACA
AGGGATTTTGTATACGACATTATTCCTTTTGTCCATAGGAACTGTGTCTT
TAGGTTTCGATAATTGTCTTCTCAGTGTATCATTGGAATAGAAAGTACAC
GTAAGTACAAGTTAGAGCTGCTGATGGTATGTAGTGGCAGAGACTTTTTT
AAGTCCATCCCAtccaaaaaaaaaggttttgccagaaaaaaaGATGTGTG
TATTTTTGCCAGTCAAAACAAGACAGTGATTCTTTGCAGTTCTTCAGAAA
GATTTCTGGAAAGCCATCTGGACCAGCTGCAGTGGTATTATTGAGCTCAT
CAATCATATCCTCAAGTATAGCCtcaaaacattttcttgttaGTGGAATA
CATTCAATTTACAGCTGTTGGAGGATAAGGGTGTTCAGGTGTACTGAAGA
ATGAAGAATGAAGAATGAGGTTGCTTAGAGGCAATCCCTGCAATCATTTC
TGGATTGCTGATCAAATTTCCTTCTTCAATTTAGTTTTTGAATATTCTTT
TGCATATGAGTGAAAGTATCCTAGGTTCTGTTTGATAGCTTTTATTGCCC
TTTTTTCCCTCAAGTTGAGATGTCTCTTTATACAAAAAGTcggggggggg
aggggtactaggATTGGGGGATGAGGGGTATTTACTGACAGGGCCTGCTT
AGACCCCTAGAGAGACCAAATATTAAGTGAAAAAGTGTCCCTTAGccctt
agagagattttttttgaaaaactttctctcaaaatcaaaaagatttccta
aaaatcgtgaattttctaACCGTTAGAGGGACtactttaaaattttctga
tttttgtgacccttagagagacttttgacGGTGCAAACCCGACCTtatcg
tccgcacatacccagcacccttttttcattaaaaattttcctgttttgTT
TTGGCTGCATGTTATATAGGGGTAGGCTTTATAAAATTACCCTCGGATTG
TTCTGACTTGAATGAGACTAGCCATCATAAAGAATGTTGGATAATTTTAG
TTCAAAAttaagaattgattttaaaaaagaaatatgaatCCAAAAGACAA
TGGGACGTCAGTGCTTTATAAAAGACCACACTTGATGGCCGCAGCTACAG
GAGCTGCACGAAAGAAACATCCAGTGAAAGCTGTCCTTGCAGGTAAAACA
TTCTTTGTCTGGGATTTTTGTTCCATTCAAATCCTGTTTGAATGAATCCA
ATAGACAATACATATATGATTGCAAACATTCAACAAAATGATGCACtaac
tcaaaaatatttttaattattgTAAAAACGATTCTACTACTAAGAATTTG
CAAGCGAACTAGATTATCATGTTTGCTGTGATGGCACTCCTCATTTGAGA
CATTCACTCAAGGTCATTGTTATTTTGAAACCTTATTATATTTGGTATAA
ATCTGCCTTGGTATCTTCCTTCAATTTTAAGGTGGGATTGCTGGAGGTCT
GGAAATATGCTGTACATTTCCAACAGAATATGTCAAAACACAATTACAAT
TAGACTCTCGTGCTGAATTTCCAAAATACAAAGGACCATGGGACTGTGCA
CGAACTACAGTCAAAGAATTTGGATTCTTTGGACTCTATCGTGGTTTGAG
TTCACTTTTATATGGATCGATACCCAAAGCTTCTATTAGGTAAATTTACT
TTACAATCAATTAAAGTTTTGCAGATCAATCCTTCTTGTTGGTATATCTG
CATATTCATACAGCCTTTTGTACATCGTAGAATTGAGTAATCTAGGTGGT
TACTAGAATAAAAGTCTAATACTACAATTTGACCTCCAATATTTGCAAAA
CTACTGACTTTGAGCGCTTCAATTCGAAGGACTACATATTTTCGTTGGGT
GGCGAATTTCCCAAATAAAGATGAATTATTCTTTTAATCGTTCAACTTTT
CAGGTTTTCAATGTATGAATACTTGAGAAACCAAATGGCAGACTCAAACG
GCAAACTAACACAGGTTGGAAACTTAACCTGTGGTCTAGGGGCAGGAGTT
GCAGAAGCTATCCTGATTGTTTGTCCTATGGAGACggttaaagtaaaatt
tatcCACGACCAAACCCAAGCTAACCCAAAATACAGAGGATTCTTCCACG
GCGTTTACACCATCGTCAAAACAGACGGTATGATTTTAATTATATAATAG
CAAAATCAATATAACAAAAAAGCTCACCTAGTAGTATTGCTTCGCACCTT
TTAGAATCAGGAGCAGCTACCGTTGGAATTTCTCAATACATCTGCTCAAC
AGCTTAGGGAAAATGAGGAACTTTTTTCAGGGGGtgggggtcaacattta
taataccaacccatagcccaaaaacccgacttttgaccttttgagctaag
ttaacaccaccaccccaaaattggtatcgataccaacttgaaaattataa
ttttcagaaaaaggggggacccacccccttaatttggtatcgataccaaa
atgactttttgaatttgacaaaatatcaccaccccctaatttagtaccaa
taccaatctgacaaatttgagcttaaagctgtttaaaggggacccacccc
ctcccacacaaacagggtactaagagaaactaaaaaaaaacttatttttg
aaatactctttcttcaaaacaacacaaaaaatgtcatatgctaaaataga
aaatgactgaaaactgacaatataataaaaacaaacccaatggagctagc
aaaatcaatctgaatcaatattatctgaatataataattgatgtgcaaaa
actaaGAGAAactattattagtacataataGATTCAttcattaccaaatg
ctatcacagaaaaaatgtttttgcttcaggcttgatcaaaaataaaactt
gaaaatatcgaaaaagtccaaaataaacaaacttcaaagtcatttatact
tattgcttatttacagtcattatacaCAAATCCAATTaaaacctgtttag
actgatatgtaccccggggtattttctagctataagggcaaaagttagga
aagttttgctgtcattttgatatggataccaactttctgaatcatattat
ttaaaaaaaggggtacccaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNtcaataccaacttgacttttcagacttttaaaggaaaaaaagacac
caccacccggctatgggtctggtatctggatgttgacccccccccctgtt
tttCAATGTTTCTCTTATTATCCTCCCCTTTATCAATGATCTAGTTTGAA
AAACCTTGTCTAGAAAGTCTAATTTTCATCATGGCTCTAGATTGTAATAC
GagggttgaaaaaaaaattatatactcTTTTTCGTCCTTAGGTATTCGTG
GTACGTACCAAGGTTTaacggctaccattttgaaacaGGGTAGTAACCAA
GCCATtcgattttttgtttataacaaCATGAAGCTTTGGTTACAAGATGG
CGACAACACAAAAGAAATAGGCATGGTTCGCACCTTTGCTATTGGAGGAT
TAGCTGGAGCTGCCAGTGTGTTTGGTAATACACCAATCGATGTTGTTAAA
ACTCGCATGCAGGTATATTCCTTTGCTGAATTCTCTATTAAATGATATTG
ACttaaaatttcgtgaaaaaagttttacctcattttcatcttcatttcaa
AAGTGATAATTTTTACGCACTCTGGTCCATGAAATTTTTCGTTAGTTTGT
TGATATTTAGAGCCAGAGAGGGCCGGTTGATTTCATATCAGGATTTTTCT
ACTATAATttacaatacacctttttgaccataGTCGCCAATTGCCTGTGC
GGGCTTTTTTTGTCCGCTTAATCCCACTAAAACGGTtgcagtcctttttt
cgcacctatggacaataaaaaaaggtgtcaaaaaggattggatcgagttt
agggggataattaaataattaagtggcacgcgccggACCgcgcggctacg
gtcgaaaaggtgtattatgcCTTTGAATAATTTAAAAGATGCTGAAGTTA
CACCAGTTACATAGTAACACGTTCAACAGTTTTTCAACGTTGAATATTGC
TATCGTTTTTTCTTTATAGGGTCTGGAAGCAAATAGATATAAGAACACAT
GGGACTGTGTGAAAAAGACGTGGGCTGAAGAAGGAGCACTAGCGtatgtt
attttttaaatgttggaTATAAACTGAAAATCTAATTTCCACGAAATCTG
TTGCTTATCTTGGTCATTATTCTTGAACATTGTAGACATTATATTCTAAC
CGAAACCATTATTCTATGTCATGAGCTCCTgctgaaaaaactaaaaatta
tttCACCTATTTACTTTAACATTCGATACTCTTGCCATATGTTTTACCCC
TGGGAAAACATCAAATTCCCCTAAATCACCACCATAAATTACCCTCGCAT
TTTTAAGATTTAGTGTTTTTGACAAAGAATCACCAACCCCACTCCCCAAT
GAATTTCGTTCAGaatcgtttttttctttttcagattttacaaAGGCACT
ATCCCGCGTCTGGGGCGTGTATGTTTCGATGTTGCTTTCGTGTTCACGTT
GTACGAACAAGTAATGAAATTATTAGACTATACATGGGATACTAACTAAT
GTTCAGCCTTTGTAAACAGACTGGTATGAACTTTTCAAGTTTTTGCTGGA
TTCTGTaagtgattttattttgaattttgtatCGTTTTCTTGAATCTTAT
GTCATTATTCGTGGTATGGTGGTATAGTGGCATGCAGTATTTCGTGACAG
CGATCCGAAGGCTTTTCATTCTGCTAAGGTGGCAATTAGGAAAACACCTT
TTTCTGTTTCCAACAATTTTTATGGTTTTTGGCAGCTAGATGTGGATTTG
AAATCTGTTTAATTCTGTGTCCGTTCAGTTCGCTCATATGTATGTTTGTT
cgcttttgtttttttgtttgctCGTTTGTTAATTTAGCCCATGGCTGTAT
TTTTagatatgaaaaaaataatgaataatgattttgtAATTGTAGATAGC
TTTAGTTTTTTTGTAGCCATGTTTCTATCATGAATTCTTCTTGTGAAAGT
CACTTTCTCCTCATCTTGATGGCCCCTGAGTGATTTTCTATACTCGATTA
TCAATTTTTCCCTATTTCAGTTGTGANATTCTTTTGTGAAAGTCACTTTC
TCTCCATCTTGATGGCCCCTGAGTGATTTTCTATAATCGATTGatcaatt
tttcccaatttcagttgtgaaatattttttacacaCGCATATACACACCC
TTGAGATTTCAACAGAAAGAAAAGTTCTTCTCAGATATTCATTAAAAGAG
CTTGCATGTTTGGGAGGAGATTTCATCACTTTGAAATCCTCTCACTGAGT
TTGAACTGCGCTTTTAAATGATTATAGGGCAAATTCTAATagtgattttg
aaaaaagaactaATTCTAAAGATGAAAATGTATTTTACATATATTTATTA
GGTGAaagtttagaattttttttcttcagaatatTTTTGTGATATTTGAC
TTCTAAAATTTTATGGCCTTCATTTTTAAAGgtctttcaatttttataac
GAAAAGATATAAATTTCCAGCATTTC

Coding sequence (CDS) from alignment at sc0000131:111174..118449+

>TCONS_00011637 ID=TCONS_00011637|Name=TCONS_00011637|organism=Clytia hemisphaerica|type=CDS|length=951bp|location=Sequence derived from alignment at sc0000131:111174..118449+ (Clytia hemisphaerica)
atgaatCCAAAAGACAATGGGACGTCAGTGCTTTATAAAAGACCACACTT
GATGGCCGCAGCTACAGGAGCTGCACGAAAGAAACATCCAGTGAAAGCTG
TCCTTGCAGGTGGGATTGCTGGAGGTCTGGAAATATGCTGTACATTTCCA
ACAGAATATGTCAAAACACAATTACAATTAGACTCTCGTGCTGAATTTCC
AAAATACAAAGGACCATGGGACTGTGCACGAACTACAGTCAAAGAATTTG
GATTCTTTGGACTCTATCGTGGTTTGAGTTCACTTTTATATGGATCGATA
CCCAAAGCTTCTATTAGGTTTTCAATGTATGAATACTTGAGAAACCAAAT
GGCAGACTCAAACGGCAAACTAACACAGGTTGGAAACTTAACCTGTGGTC
TAGGGGCAGGAGTTGCAGAAGCTATCCTGATTGTTTGTCCTATGGAGACg
gttaaagtaaaatttatcCACGACCAAACCCAAGCTAACCCAAAATACAG
AGGATTCTTCCACGGCGTTTACACCATCGTCAAAACAGACGGTATTCGTG
GTACGTACCAAGGTTTaacggctaccattttgaaacaGGGTAGTAACCAA
GCCATtcgattttttgtttataacaaCATGAAGCTTTGGTTACAAGATGG
CGACAACACAAAAGAAATAGGCATGGTTCGCACCTTTGCTATTGGAGGAT
TAGCTGGAGCTGCCAGTGTGTTTGGTAATACACCAATCGATGTTGTTAAA
ACTCGCATGCAGGGTCTGGAAGCAAATAGATATAAGAACACATGGGACTG
TGTGAAAAAGACGTGGGCTGAAGAAGGAGCACTAGCattttacaaAGGCA
CTATCCCGCGTCTGGGGCGTGTATGTTTCGATGTTGCTTTCGTGTTCACG
TTGTACGAACAAGTAATGAAATTATTAGACTATACATGGGATACTAACTA
A
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006530XLOC_006530Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011637-proteinTCONS_00011637-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011637-exon-sc0000131-1491911889:111174..111297TCONS_00011637-exon-sc0000131-1491911889:111174..111297Clytia hemisphaericaexon
TCONS_00011637-exon-sc0000131-1510915933:111174..111297TCONS_00011637-exon-sc0000131-1510915933:111174..111297Clytia hemisphaericaexon
TCONS_00011637-exon-sc0000131-1575043694:111174..111297TCONS_00011637-exon-sc0000131-1575043694:111174..111297Clytia hemisphaericaexon
TCONS_00011637-exon-sc0000131-1491911889:113842..113865TCONS_00011637-exon-sc0000131-1491911889:113842..113865Clytia hemisphaericaexon
TCONS_00011637-exon-sc0000131-1510915933:113842..113865TCONS_00011637-exon-sc0000131-1510915933:113842..113865Clytia hemisphaericaexon
TCONS_00011637-exon-sc0000131-1575043694:113842..113865TCONS_00011637-exon-sc0000131-1575043694:113842..113865Clytia hemisphaericaexon
TCONS_00011637-exon-sc0000131-1491911889:114155..114362TCONS_00011637-exon-sc0000131-1491911889:114155..114362Clytia hemisphaericaexon
TCONS_00011637-exon-sc0000131-1510915933:114155..114362TCONS_00011637-exon-sc0000131-1510915933:114155..114362Clytia hemisphaericaexon
TCONS_00011637-exon-sc0000131-1575043694:114155..114362TCONS_00011637-exon-sc0000131-1575043694:114155..114362Clytia hemisphaericaexon
TCONS_00011637-exon-sc0000131-1491911889:114627..114850TCONS_00011637-exon-sc0000131-1491911889:114627..114850Clytia hemisphaericaexon
TCONS_00011637-exon-sc0000131-1510915933:114627..114850TCONS_00011637-exon-sc0000131-1510915933:114627..114850Clytia hemisphaericaexon
TCONS_00011637-exon-sc0000131-1575043694:114627..114850TCONS_00011637-exon-sc0000131-1575043694:114627..114850Clytia hemisphaericaexon
TCONS_00011637-exon-sc0000131-1491911889:116215..116435TCONS_00011637-exon-sc0000131-1491911889:116215..116435Clytia hemisphaericaexon
TCONS_00011637-exon-sc0000131-1510915933:116215..116435TCONS_00011637-exon-sc0000131-1510915933:116215..116435Clytia hemisphaericaexon
TCONS_00011637-exon-sc0000131-1575043694:116215..116435TCONS_00011637-exon-sc0000131-1575043694:116215..116435Clytia hemisphaericaexon
TCONS_00011637-exon-sc0000131-1491911889:116943..117016TCONS_00011637-exon-sc0000131-1491911889:116943..117016Clytia hemisphaericaexon
TCONS_00011637-exon-sc0000131-1510915933:116943..117016TCONS_00011637-exon-sc0000131-1510915933:116943..117016Clytia hemisphaericaexon
TCONS_00011637-exon-sc0000131-1575043694:116943..117016TCONS_00011637-exon-sc0000131-1575043694:116943..117016Clytia hemisphaericaexon
TCONS_00011637-exon-sc0000131-1491911889:117358..118449TCONS_00011637-exon-sc0000131-1491911889:117358..118449Clytia hemisphaericaexon
TCONS_00011637-exon-sc0000131-1510915933:117358..118449TCONS_00011637-exon-sc0000131-1510915933:117358..118449Clytia hemisphaericaexon
TCONS_00011637-exon-sc0000131-1575043694:117358..118449TCONS_00011637-exon-sc0000131-1575043694:117358..118449Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000131supercontigsc0000131:111174..118449 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
22.7204	11.9578	0.00497771	0.000357975	10.8113	7.89941	6.28827	17.7046	6.58188	14.2263	15.1101	3.04817	12.5956	12.3197	19.8102	1.31498	11.2677	13.9836	0.249835	10.4508	6.40656	2.73243	12.9424	26.5081	0.320917	8.18443	22.6976	19.841	26.3618	1.71816
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002067Mit_carrier
IPR023395Mt_carrier_dom
IPR018108Mitochondrial_sb/sol_carrier
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
Blast
[Close]
BLAST of TCONS_00011637 vs. Swiss-Prot (Human)
Match: TXTP (Tricarboxylate transport protein, mitochondrial OS=Homo sapiens GN=SLC25A1 PE=1 SV=2)

HSP 1 Score: 356.295 bits (913), Expect = 4.039e-117
Identity = 188/295 (63.73%), Postives = 233/295 (78.98%), Query Frame = 1 
Query:  103 TGAARKKHPVKAVLAGGIAGGLEICCTFPTEYVKTQLQLDSRAEFPKYKGPWDCARTTVKEXXXXXXXXXXXXXXXXXIPKASIRFSMYEYLRNQMADSNGKLTQVGNLTCGLGAGVAEAILIVCPMETVKVKFIHDQTQANPKYRGFFHGVYTIVKTDGIRGTYQGLTATILKQGSNQAIRFFVYNNMKLWLQDGDNTKEIGMVRTFAIGGLAGAASVFGNTPIDVVKTRMQGLEANRYKNTWDCVKKTWAEEGALAFYKGTIPRLGRVCFDVAFVFTLYEQVMKLLDYTWDTN 987
            +G A+  HP KA+LAGG+AGG+EIC TFPTEYVKTQLQLD R+  P+Y+G  DC R TV+  G  GLYRGLSSLLYGSIPKA++RF M+E+L N M D+ G+L     L CGLGAGVAEA+++VCPMET+KVKFIHDQT  NPKYRGFFHGV  IV+  G++GTYQGLTAT+LKQGSNQAIRFFV  +++ W +  +  K +  + T   G +AGAASVFGNTP+DV+KTRMQGLEA++Y+NTWDC  +   +EG  AFYKGT+PRLGRVC DVA VF +Y++V+KLL+  W T+
Sbjct:   17 SGKAKLTHPGKAILAGGLAGGIEICITFPTEYVKTQLQLDERSHPPRYRGIGDCVRQTVRSHGVLGLYRGLSSLLYGSIPKAAVRFGMFEFLSNHMRDAQGRLDSTRGLLCGLGAGVAEAVVVVCPMETIKVKFIHDQTSPNPKYRGFFHGVREIVREQGLKGTYQGLTATVLKQGSNQAIRFFVMTSLRNWYRGDNPNKPMNPLITGVFGAIAGAASVFGNTPLDVIKTRMQGLEAHKYRNTWDCGLQILKKEGLKAFYKGTVPRLGRVCLDVAIVFVIYDEVVKLLNKVWKTD 311
The following BLAST results are available for this feature:
BLAST of TCONS_00011637 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TXTP4.039e-11763.73Tricarboxylate transport protein, mitochondrial OS... [more]
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