TCONS_00011639 (transcript) - C. hemisphaerica

Overview
NameTCONS_00011639
Unique NameTCONS_00011639
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2020

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00011639 ID=TCONS_00011639|Name=TCONS_00011639|organism=Clytia hemisphaerica|type=transcript|length=2020bp
ATTTTTAATTAGTATATCTCAGTTAAACGAATTGTTCAAGTGAGACAAAA
GAAAGGTAGCATGATTTAGCAGCACCGCTGAGCCACCTCAAACATTTACA
CGTCACGTATTTGAACGCAAAGGTGGAGAGCTGCTTTGAACCTTATCCAT
TTACCTTATAAGGAAAGAATTATCTTCCACTATAAGAGATTTTAACCATC
TGTATCCACGATTACCTTTCACCGAGCGATTAAAGTAATATATTTTGTAT
TACaatcaaagacattgaaaaGGGTGTGGTATGTCTTCATCTGGTTCTAT
AGAACGTGTCAAGAAAGAGAGTATAAAAGGAAGTGGTACAGAGGAAGTAG
AGTGTCTTTCTAAGCTGAGTTTTTAGTAAAGAGGAGAAGGGAAGAAGTCA
AGATGAAGCTTTTTCTTATCTTAGTCATTGCAATTGCTACAGTCACTCAA
GGTAAACATGTCAAACGTTCACACCAAGATCACAAAAAGGTCAACACATT
ACCAAGTTATGATGGACCAATGCCCGAAGAAGATGCACAATATGTTGAAG
AAATGTACCATGATGAATTGAGCTGCAAGGATAAATATTCAAATTGTCCA
ACTTCTTTGCGTCAATATTGTGAAAGTCACAGTTTTGTGAAGACGGATTG
GTGTCGGAAAACATGTGGTGATTGCTCACCAGACCCAGCTCCTGCTTATG
TGACAGCTCAACCGAAAATTTCAAGCTCAGAGATGGAAAGCATCAAAGCA
ACTTGCTTGGCAGCTCACAATGCGAAACGAGGACTCCACAAAAACACACC
CTCAATGACTTATGACATGGAGCTTGCAAAACGAGCTCAAACCTACGCAG
AATATCTCCTGGAATTCGACGAGTGGAAACACGATGCCTTTCGAAAATAC
AATGGCTACGAATCTGGAGTCGGTGAAAATCTTTACTGGTCATCTTCAGC
AAGTCGAACCTCTACTAATGCTGTTGTCTCATGGTATAACGAAATCAACA
ACTACAATTTTACAACTGGCAAGTCAAACGGTGGAGATATTGGTCATTTC
ACACAATTAGTTTGGGATTCTTCAACTAAATTGGGTTGCGGTGTTGCTAA
AGGAACAGGTGGAACTTATGTCGTTTCCAGATATTTGTCATCTGGTAACA
CCAATATACACAACATGTTCATGGgttgaaatctaaaaaagatgaaaaag
aagacCCCCCTGCTATCGAAGAAGTCTTGTAAAAAAACCTTCTTTTTAAA
ATAACAAGAAATAATCCTGTTCGCTTTTCTCTGGATgtaattcttaaatt
tttgcaagggtttatattttacatttttctttgttACATAAAGTCCATAA
CGTATTTAATATCTAAATTAATCTATATTTGTCACTGATGGCATGTAATA
TTTATTCTTATACATATTTTATCTTCTTAACATAATAAAAACCAGGATAA
TCACGGAATAATTAGTTATTTATTGAAAtactaaaaatatcaaaaattat
atttctattTTCTCAAACCCTACCAGGTTATTCAATTGTTAGAATCCTGT
GTTTAAAGACGATGTCATGCAGAATAATTAACAATCCCAGCATTAAAcaa
cagaagcagccggcggagagatATGCATTCtcatcttctaggagaccacg
TGTTATGACCTTCAATTTcttaattgttcttttttttacgGTAATTCTCT
CTTGATTATACACCTGCCTCCCTAAAAGAtttgttctgaagctttctaga
caacaagaacacctTAGGcgaccttgattatacccctgtctcgtcaaaGC
ACATtgttatttctagctgattaattttcattttaaaaatctgatcagaa
taaatcaaaatttctagctgaaacatactctcagaacacatcggaaaaaa
aggttGCCTCGACGGCTGCTTTCAAAAAAATACCACACTTAATATTTTGC
TTTCATTACTTTGATCATAGAACTTTGAAGCTGGGTTTTTATTTAAACAA
CATGCATCGTCTTTAAagcc
Run BLAST on NCBI

protein sequence of TCONS_00011639-protein

>TCONS_00011639-protein ID=TCONS_00011639-protein|Name=TCONS_00011639-protein|organism=Clytia hemisphaerica|type=polypeptide|length=258bp
MKLFLILVIAIATVTQGKHVKRSHQDHKKVNTLPSYDGPMPEEDAQYVEE
MYHDELSCKDKYSNCPTSLRQYCESHSFVKTDWCRKTCGDCSPDPAPAYV
TAQPKISSSEMESIKATCLAAHNAKRGLHKNTPSMTYDMELAKRAQTYAE
YLLEFDEWKHDAFRKYNGYESGVGENLYWSSSASRTSTNAVVSWYNEINN
YNFTTGKSNGGDIGHFTQLVWDSSTKLGCGVAKGTGGTYVVSRYLSSGNT
NIHNMFMG
Run BLAST on NCBI

transcript from alignment at sc0000131:137218..149715+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00011639 ID=TCONS_00011639|Name=TCONS_00011639|organism=Clytia hemisphaerica|type=transcript|length=12498bp|location=Sequence derived from alignment at sc0000131:137218..149715+ (Clytia hemisphaerica)
ATTTTTAATTAGTATATCTCAGTTAAACGAATTGTTCAAGTGAGACAAAA
GAAAGGTAGCATGATTTAGCAGCACCGCTGAGCCACCTCAAACATTTACA
CGTCACGTATTTGAACGCAAAGGTGGAGAGCTGCTTTGAACCTTATCCAT
TTACCTTATAAGGAAAGAATTATCTTCCACTATAAGAGATTTTAACCATC
TGTATCCACGATTACCTTTCACCGAGCGATTAAAGTAATATATTTTGTAT
TACaatcaaagacattgaaaaGGGTGTGGTATGTCTTCATCTGGTTCTAT
AGAACGTGTCAAGAAAGAGAGTATAAAAGGAAGTGGTACAGAGGAAGTAG
AGTGTCTTTCTAAGCTGAGTTTTTAGTAAAGAGGAGAAGGGAAGAAGTCA
AGATGAAGCTTTTTCTTATCTTAGTCATTGCAATTGCTACAGTCACTCAA
GGTGAGTTTTCTTATGTCATTTTGCAATTTCATCGAAACTTTAACTTTTT
GAAGCTTCTTTGACCCGAATTTTCCGTGTAACCTGGTTATTGTTTTGGTT
AGGATTTTTGCATGAAATTGCCTCCTATTTCGTTGATTTCTGTGTCACTA
CTAAAGGTTTaaatgtaaccaacaaaactatggtattttaaacattttct
gttaggccaactcttcctgaatctgaaaatttaaaagtcataatgaaaaa
ttttgatggagaagaaaatgaagacttatgcgaagaattatatttcaacc
tttgaggaccttattttcggcgaagaaaaaacatttcgaaaatttttttg
cgttaGAAGGTGTGtctttaaccaaactaaaaagagattttcggaaaatt
ttagTAAAAGCTTCTTTGCCTCAAaatcgttttttatttgaaaattttca
aatagttcaattctttgcggacaacTTAAAATATGTTCGAACCAAAAAGG
TTAAATGACCaataaaacttagcactttttgatGAAGAGGGTAAcataac
attttattaacgtctttttaaagttcataaggacatgtttttttttgact
gtaccaaaataCCGATTTTCAATCAACCCGGTTCAAATCGGCACTAACAG
AGACAGCTGAACCCTTTCTTATCGctattcaaaaataagaaaatatatta
gtagctctgtccgatactttttgtccaatcttaatagcttttatggaact
taagatatcgcttgttgaatccggagtattccaggatgaaaaaaatcata
gtctATTTCGGATTTATAAAGTCGGCTCTATATTTGGCTTTTGTCGTGTC
CAATTTATATACGAAACTTATATCAGGGTGTAGCNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTGTAGCtaaaggat
tgaattttcacatcgacctcttttttttggaaaaaaccggaggaaaatgg
gatcaaattgatcatttttgaaatctaggtgctaatcctaatcgtatata
ttttcctgacaaGTCTATCTATCGAGGaggtgatttgagatttttgttta
gttgaaAGAAAGGAACGAACTGAAGAAAAAGGGAATtgttaaaatgagtg
aaaaatgattaaaaaagtcgtgatgattgttttgatcataactcactccg
acctttaaaaaaattactcctcaggctattttatgattttaggctacctc
aggaatgcatagaaacctcctcaggaccgaataatgagtcatggagtgag
atatgatccaaaacactccatgattaattaatcctgaaatactccgaatt
ttgaaatttcaaatagctcattttaaagcccttctcaaatttcaatacat
atcaaaatcttgggaaaattcatcatgcgaatgacgaaataattaaaata
aagtgattttcacgattttcgaaaacctaattttggtacagtcaaaaaaa
aacatgtccataaCGTCATTATTGTAACTAAATTCTtaaagttcttaatt
actcttgacAGGATGAATAATAAACAActtttgtaaaagaaaaatcCCTT
AATTTCTTACTATGATCAGAGTCCTTAAGTGTGCCGAAGTTTACCTGTAA
GCCACGTATTGTACGCAAACAAGCCAAAGTGATTATGATTTGATTTAAGG
TTCATTAACTATGAAGaccgaataaaaaataaacgCGAAAATCGAAGCGT
AACTTTCAAAGTTTTCTATTGATTTTTAAAGGTAAACATGTCAAACGTTC
ACACCAAGATCACAAAAAGGTCAACACATTACCAAGTAAGTAAAACTTGC
CGTTCTTTTACTACTTTTAACGGCTTTTTCATTTTACACCTTCCAAAGTC
atcattctttgaaattttcatgagACGCATATTTTTGACACTTGAACCCA
TAATGATATACCCATAATTCTTTGCAAGGTTATGATGGACCAATGCCCGA
AGAAGATGCACAATATGTTGAAGAAATGTACCATGATGAATTGAGTGAGt
ccttttaaatattttgtacaGTAAGATTTTCGTTATGCAAAGCAAACCCT
AAAAATCCCgtattttcattctttatttttatcattaCTAGTATTCCCAA
AGAGACATTGTATTTTAAGAAAACGAGCGGTATTTTTGAGGTATAACAAC
ATTTATACATGTTATATAATCCAAATTCATTGAAAACTGGCAATTTCCCA
TTCACATTGCATTTAACATCCTCATTCTGTCTCAATTAGCAAAAGAGTTG
TTACagcaccgggtcactgagacagaggGATGTTTTTCTACATTCTGAAC
TACAGCTAACCACTTGGTGTCAAGTCTATTCTCTCTCATTTTCTTTGAGC
CGATACCAAAATAACGAACGTCTATATTTTAGGCTGCAAGGATAAATATT
CAAATTGTCCAACTTCTTTGCGTCAATATTGTGAAAGTCACAGTTTTGTG
AAGACGGATTGGTGTCGGAAAACATGCGGTGATTGCTCACCAGACCCAGC
TCCTGGTAAGATATAATCGAAATCAATATATCAGTAGTAGAACCTCCCTT
TAGACTTTTTATAAATCtccaaaataaaatttaaccATCATGCTTTGTTG
CAAGGCAGTTGTTTTGAGAACATTCGTTATCGTTAAGACTCAATGTAGAC
CAGTTAGACTTAGCTACAAAAATGGGATAAATATTCAATACTTTTTTTTC
ATAGCTTATGTGACAGCTGAACCGAAAATTTCAAGCTCAGAGATGGAAAG
CATCAAAGGTAAGACTTCAAGACTTCCAAGTTTTGGAAAGCGAATTTCAA
TCCTGAAAGCTGGTAAAAAATTGAATCTCGTTTGAGTGGCgataaatgaa
caaaaaattataGTAAAGAAGTTACCAGACATGTTTTATAGCCTGTGATT
AAATGTTTGTTAAGCTACAGTTATGTATCGTTTTTCTCTTGTTTATCTAA
AAGCAACTTGCTTGGCAGCTCACAATGCAAAACGAGGACtccacagaaac
acaccctcaATGACTTATGACATGGATCTCGCGAAACGTGCTCAAACCTA
CGCAGAATATCTCCTGGAATTCGACGAGTGGAAACACGATGCTTTTCGAA
CATACAATGGCTACGAATCTGGAGTCGGTGAAAATCTTTACTGGTCATCT
TCAGCAAGTCGAACCTCTACTAATGCTGTTGTCTCATGgtaagaaaataa
caaaaaatatctCAGTCAAGGTTTTTAATTGGTACGGTGgaattttttcg
aaagtttGTCTTTGAGAGGCTTCTGAGGGCTAAGTTTCAAATGTATTTCA
AATGCCTTcaacaaagatttattatacactggatatacaagtagcAGATT
TTTGTAGATTTCTCGTGtgtagctatgtccgcagtaatgatattattgtt
gttcactctccttccctcattaaacgatttttcgaagcatttttattgca
tttctttttgaaaatcactcatccaattcccaaaagagacttccTGCGAG
AGTCAGATTCTTTCACTTAACTGCTAATTacaagtcgttatgacgtttca
agctgtgagaaagatgcaaaagacgtgttgtgtataagaaattgaatgtt
gacaccagaaattttcaaacttcaacctatAAAAAAACACCTTGCCACCG
CGTGCCTagaaaggattttcataccacagtggagctaagacattcaagtc
ttatgtatgttaatttcagctcttctggggacagtcttggaaagatattt
ccaattgaaaattgtgtgtcactataagcattttgtctgaatttcttgtc
taatgatgattCTCTCACACCAGTTTTCACAAATGTATCAGgcttggtat
tctagccttactttcaaactttttttctgcaaatgtacaaaatggaagag
ctagagaacttttttttaaataagactgataaacacttttaaaaatcaga
catcttcgagccACCATGACAGTTGTCCTTTGCggacaaagctagaacat
caattgttttctgaaacaatgaaaatacaatgatcgctctccatcgtttt
atgagtcgtttatccagtgtataataaatctttgccTTCAAGTTGTATAT
CATTCCAAGCAGAATTCTGAAACCACAGGTATTCTTCTATAAAAGATGTT
GTAGAAAGAAAATTAACAAAGTGGATATTTCAACAAGGCTTGAGGCTGCT
GTTGGAAATTTCTTATAATTATAGAATTGAATCTGTCTCGACAGTTAAAA
ATGAGAAagcctactctcgggtacctaatagccgcccccgcccctgctaa
ttaatttttcgaaatttttccacccagggcattcttattccaacctcccc
gcttattgattttttggaaaatgtttctaaaagttcccttttttgtccta
attctgctgtattagccaccttttcaaaaagttttccacccagcacattt
ttattccaacccccccccccNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATTGGCCATTTCACAC
AATTAGTTTGGGATTCTTCAACTAAATTGGGTTGCGGTGTTGCTAAAGGA
ACAGGTGGAACTTACGTCGTTTCCAGATATTTACCCGCTGGTAACACACA
AGGCCAGTACACACAACATGTTCATGGGTTAAGCGCGAAAAAAGATCAAC
ACGACCAACCTGCTgttaaagaaaaagttttgtGAGCGAGCGACTAACAC
TGGTTCCTTGATGTTGTCGATTGACTGAAAGATGGGCTTCgacaattttg
atttctaaaatatttctcatagaTTTACGTAAACCCTTATCTCTTGTGCA
GTATATATTTTGCTTACAAATCATTCGATTTGTATTGTTTTCTTTATCTA
AATATAAACTTCCTAAAAAACATTTGTGTACTAAATTATAAATCTTCGAT
CCGATTTTTGGTAATCAAGGTCGTGGGTGTTAAACCCCCAGTCGGGTCAC
ACCATACCAAAGACAACAATAAGCAATAAGAAAAGGATTGAGGGCAAATG
GAGCAATCCTTCGGATGAATAGTTATCGTAAGATGAGCTTTCGAGTCGTT
CCCGGCTACTCTAAGGTCCCAAATAAACATCCCCACCCagttattaattt
tcgaaaagttttagggcccccccccccccctttttaatttttcgaaaatt
ttttggaCCCCCCCCCTAGCCCcagaaaacccccccccccatttattaat
ttttgaaaagtttttggacCCCCCCCCTAGCCCcagaaaacccccccccc
catttattaatttttgaaaagtttttggacCCCCCCCCTAGCCCcagaaa
acccccccccccatttattaatttttgaaaagtttttggacCCCCCCCCT
AGCCCcagaaaacccccccccccatttattaatttttgaaaagtttttgg
acCCCCCCCCTAGCCCcagaaaacccccccccccatttattaatttttga
aaagtttttggacCCCCCCCCTAGCCCcagaaaacccccccccccattta
ttaatttttgaaaagtttttggacCCCCCCCCTAGCCCcagaaaaccccc
ccccccatttattaatttttgaaaagtttttggacCCCCCCCCTAGCCCc
agaaaacccccccccccatttattaatttttgaaaagtttttggacCCCC
CCCCTAGCCCcagaaaacccccccccccatttattaatttttgaaaagtt
tttggacCCCCCCCCTAGCCCcagaaaacccccccccccatttattaatt
tttgaaaagtttttggacCCCCCCCCTAGCCCcagaaaacccccccccct
aattataagatttaaaaaaaaattcagtcccgCCTTTTATTCGGAACGTT
GCGTTAGATTAGAGTACAGTTGCAAACTTATTTGCTAGAGCTAGCCAGGC
AGATAGACATTGACGAGGGAGAGtttaaaaattgatgatgaaGAGCCTTT
TATAGCAGATCTTTACAGAAAAAATTTCCTGCAAGAACATATTCGGTACA
GAATTCCAAATgtcattgaaaattttatttgaatcgTAAGAAATTAAGGT
AGGAGATGACAATCGCTACTTCAACTTAAAATTCGGAGATGCAAGGTCAA
AATTCATATTTCGAAATATAGGGTTGCGTGTTTGTGTGTCGAAATATTAG
TTTTTGATAATATTAAAAAGTCGGTATCGTTTCTTTAatcattattttta
attaataTATCTCGGTTGAATGAAATGGCTCACGTGAAACAAATGAGGGA
TAGCATGACCTTCAGTCCTTTACCTTTGAGACACTTCCAAGGGTGGCGAG
TACCAGGCTCGAAAAATAATGAAGGAGAACTAACGTTTATTTATATTTCT
TTACAAGGCAAACAACGTTCTTCTCCACAGACTCGAATCCTTCTGTATCT
CCCCGCTTAATTACCTATGTGCCTTTTCTATGACCTATCTATTAAAGTGC
AATCTTCAACATTAAGCAATAATCAATAATAAAAAACCATTGAATACATA
CGTGGCATTGAAACAGCGATGCGtgattattgaaatttttaccGCCATCT
ATGTCACGTGTCAATTTAAAAGGTATAAAAGAGGAGCAAAGGAGGAGGAA
AATTTATCATCTTTGCGTTCTATAAAAACTCAGCATGGAGACTCTAACGT
TATTACTAATTGTATTAGTATCAATTTCTCAAGGTAAGAAATTATAATAA
CTTTAGAATGAAGTTTAAATCAAAAGATCACCGAAAAGACATTacttttt
gtgtcttttgtACTTGTTTTCCGTCCcactaggcttctgctcatcctcta
gcgaaaagagtttcttatagcAAGTATATCTGTACCCCCATAGGTTCCAA
GTACTAGAAGTTTAGATGGCTCACATACATGGTGTATAATCTAGGTCAAA
TTGGCTTTATTTTGATTGTATGCAAGATCAGATATATTAggtctttgaaa
aataaacgcGAAAATCGAAGCGTAACTTTCAAAgttttatattgattttc
aaAGGTAAACATGTCAAACGTTCACACCAAGATCACAAAAAGGTCAACAC
ATTACCAAGTAAGtaaaacttgacttcactgggGAGGGGGGGGGCTCTTC
AAATTAGGATATAAACCATTGGAACATGACTGTGAGACGGCTCGAACAGT
ACGGCACGATACCCTATATTTAATGACCCtatatttttaagaacatcctt
ATATATAGGGAAGTCGTCCTTACATTAACGAGAAACAGAGTATTCTTCAT
CAATACTTGAGTTTCATGCTCTTTACAATCATCAGCTTAGGGAATTCCTT
ATATTTAAGGACCTTTTTTCCTACTGATCTTCATTTAATCTACTGGGTCG
AGGAAATAAAAACGATCTAGTGAGCAGAAGTCCCTATAAATAGGGAGGTC
CTTAAATGTAGGGTATCGTGCGGTAGGTTATGATGGACCAATGTCATACA
ACTCTTGTCTTGTACTTTATTGCTAAGAAGGTCAAAGTTTAACGAACAAA
TACATTCTTATTCAATCAAGGTTACGATGGACCAATGCCCGAAGAAGATG
CACAATATGATGAAGAAATGTACCATGACAGTTTAAGTGAgtcttttcaa
atattttgtatgGTAAACAATATAAAATTTGACAACTCAATATCCACCTA
AAATCCTAATAAATGACGTATTCCCATGAATTCTCCAGCTAAATTCCCGT
ATGTTAAATATCGCTAGCGATTATAAGTAAACATTTCAAGAGCAATTAGT
GCAAAGGAGGTATGGGATTTCAAGTCGTACAAAGGAATAGATTTGTGCAG
ATTTTTTACTAATTTAGAAACCAAAGTGTGCTACTAAGTCAATACACTTT
CATCCCACTCAAAAAAATGGCCTCTCTTTGATTATGATGTCTGACTGATA
ATTTGTTCTTTTCGgcttaatattttattttctttgagcCGATACTAAAA
TAACGAACGTCTATATTTTAGGCTGCAAGGATAAATATTCAAATTGTCCA
ACTTCTTTGCGTCGATATTGTGAAAGTCACAGTTTTGTGAAGACGGATTG
GTGCCGGAAAACATGTGGTGATTGCTCACCAGACCCAGCTCCTGGTAAGA
TGTAATCGAAATAAAAAACTTCGTGATGACATTGAGTTTAAATCATAGCT
AAACTTTGTACCAAGTTCAAGGTTGAAGTCATACCTTAGCAACTATAGAT
TAAACATTATTGAAGGTAAAAAACACCCACCGCCTTGATAATACGAACCT
CGAAAGCCTCATAATATGATAGGGCTACGGCTTTAGATGATTAATTAGAA
TGGAATTGTTAATTTGTAAATAAAGTTGTAAAAGCATGACAGGCTAAGGC
CGAAGCTCAAGAACCCATCATCATCGGAATATGCTTGGTTGATAAATCGa
ataaatatttaatattttgtttCATAGCTTATGTGACAGCTCAACCGAAA
ATTTCAAGCTCAGAGATGGAAAGCATCAAAGGTATGACTATTAACTTTCA
CTATCATTAAAGCTTTATTCCTGATCAAAGTACAGAAATTTTTGTGATAT
TTGTGATTTACGATGGAAACTTTGTTTAGCTATATTTATCCTTTTTTCTT
GTTTATCTAAAAGCAACTTGCTTGGCAGCTCACAATGCGAAACGAGGACT
CCACAAAAACACACCCTCAATGACTTATGACATGGAGCTTGCAAAACGAG
CTCAAACCTACGCAGAATATCTCCTGGAATTCGACGAGTGGAAACACGAT
GCCTTTCGAAAATACAATGGCTACGAATCTGGAGTCGGTGAAAATCTTTA
CTGGTCATCTTCAGCAAGTCGAACCTCTACTAATGCTGTTGTCTCATGGT
AAGAAAATAACAGAGAAATATCTTATTCAAGATTCTTAACACGTTCACAT
CCGAGGTTGAATTTTATCGAATGTTTTAATTTGAGAGAGTTATGTGAAGG
CAGGGGGGTACTGTCTCACAGGGGTTCTCGATTCCACCagctttttccaa
aatttccgtcaaactatttaaaaagaagcaaaattccgtcaccgaaaatt
cctttgaagtttttgtcgaaaattccgcaaatttcgaatatttttgctaa
attccgtttatCCACACCCCTTGCCCTCAAATAGCTCTCTCAAACAAAGT
AAAACTTTCGATGAAATTCAAGTTCGGTTGTGGACGTGTTAAGACCCTTG
TCGAATTCTTTCCGCCTCCGTCAGATGACCCTGTTTCCGAAATTCCGTTT
AAATTTTCGTCAAGTTCCACCAATCCGTCCGAAAAAAAGTCTATTCCGCT
CCAAGCCACGGACCTCCCTTATGTGTTTGAGTTTCCAATACGTTTACGTC
GAATTCCACGTAGATTTTAAAAGGCGTAACAAAAAGAAGGTGAAAATCTA
GGTATCAAAAGTGGAATGACCCCTCTACAAAATATACTCTCAGTCctcga
gtgacttagggcaagtctcaaaaacctaacagtttaccctaagttttcgc
taccaatagcagccagattcagagatccacttagggctctaaagtacctc
tataccttaaggtttcagggcccggttgttacgtaattaaatattaacat
aaaaattaattattaaagaaattgtaatcatgacgtcataatttgatcga
atttggtgacgtcatgaatcgCATAATCGTTATAATATAAAAAGTACATG
TCAAATCtttcccaaatttgaaccaaagatgcatctaactgaaatataac
tttttgaaaaaaaatttttggaaaaatttgatgacgtcagcaaaaaattg
catttttcgattttttgcattttttgctgacgtcatcaaaatcgtcaaaa
aatttttcattgaaaagttcggcaccattaagatgcatctttggtccaaa
tttgacaaagatttgacatgtacttatagagttagagctaatttacgctt
tatgacgtcataatttgatgacgtcacaattcacactttctttaataatt
aatttttaggttaatatttaattacgtaacatcGGATCCTGAAACTTTAA
GGTATGggtcatctaaaaatccataagtgaatccctgagaatgggtgcta
ttggtcgcggattcgggatttgtgattttttaaaaNTTTAAggtataggt
catctaaaaatccataagtgaatccctgagaatgggtgctattggtcgcg
gattcgggatttgtgattttttaaaatctagacacgccctaactcacccg
agtCAGCAGCGtgatttaaattttgaaacatgTATTCATAGATCAtgtga
aaaatcttttaaaagtatgaaagatttttaagaaatttttcaacaaagGT
TAAAGCTCCGGgaaattatttatttatcatAATTGTTACATATGGTTAAA
CCTACAGGCTAAAGAAACTGGAAGGAGAACCATTTTGATTATATTCTGTG
GTTAATTTCAGGTATAACGAAATCAACAACTACAATTTTACAACTGGCAA
GTCAAACGGTGGAGATATTGGTCATTTCACACAATTAGTTTGGGATTCTT
CAACTAAATTGGGTTGCGGTGTTGCTAAAGGAACAGGTGGAACTTATGTC
GTTTCCAGATATTTGTCATCTGGTAACACCAATATACACAACATGTTCAT
GGgttgaaatctaaaaaagatgaaaaagaagacCCCCCTGCTATCGAAGA
AGTCTTGTAAAAAAACCTTCTTTTTAAAATAACAAGAAATAATCCTGTTC
GCTTTTCTCTGGATgtaattcttaaatttttgcaagggtttatattttac
atttttctttgttACATAAAGTCCATAACGTATTTAATATCTAAATTAAT
CTATATTTGTCACTGATGGCATGTAATATTTATTCTTATACATATTTTAT
CTTCTTAACATAATAAAAACCAGGATAATCACGGAATAATTAGTTATTTA
TTGAAAtactaaaaatatcaaaaattatatttctattTTCTCAAACCCTA
CCAGGTTATTCAATTGTTAGAATCCTGTGTTTAAAGACGATGTCATGCAG
AATAATTAACAATCCCAGCATTAAAcaacagaagcagccggcggagagat
ATGCATTCtcatcttctaggagaccacgTGTTATGACCTTCAATTTctta
attgttcttttttttacgGTAATTCTCTCTTGATTATACACCTGCCTCCC
TAAAAGAtttgttctgaagctttctagacaacaagaacacctTAGGcgac
cttgattatacccctgtctcgtcaaaGCACATtgttatttctagctgatt
aattttcattttaaaaatctgatcagaataaatcaaaatttctagctgaa
acatactctcagaacacatcggaaaaaaaggttGCCTCGACGGCTGCTTT
CAAAAAAATACCACACTTAATATTTTGCTTTCATTACTTTGATCATAGAA
CTTTGAAGCTGGGTTTTTATTTAAACAACATGCATCGTCTTTAAagcc

Coding sequence (CDS) from alignment at sc0000131:137218..149715+

>TCONS_00011639 ID=TCONS_00011639|Name=TCONS_00011639|organism=Clytia hemisphaerica|type=CDS|length=777bp|location=Sequence derived from alignment at sc0000131:137218..149715+ (Clytia hemisphaerica)
ATGAAGCTTTTTCTTATCTTAGTCATTGCAATTGCTACAGTCACTCAAGG
TAAACATGTCAAACGTTCACACCAAGATCACAAAAAGGTCAACACATTAC
CAAGTTATGATGGACCAATGCCCGAAGAAGATGCACAATATGTTGAAGAA
ATGTACCATGATGAATTGAGCTGCAAGGATAAATATTCAAATTGTCCAAC
TTCTTTGCGTCAATATTGTGAAAGTCACAGTTTTGTGAAGACGGATTGGT
GTCGGAAAACATGTGGTGATTGCTCACCAGACCCAGCTCCTGCTTATGTG
ACAGCTCAACCGAAAATTTCAAGCTCAGAGATGGAAAGCATCAAAGCAAC
TTGCTTGGCAGCTCACAATGCGAAACGAGGACTCCACAAAAACACACCCT
CAATGACTTATGACATGGAGCTTGCAAAACGAGCTCAAACCTACGCAGAA
TATCTCCTGGAATTCGACGAGTGGAAACACGATGCCTTTCGAAAATACAA
TGGCTACGAATCTGGAGTCGGTGAAAATCTTTACTGGTCATCTTCAGCAA
GTCGAACCTCTACTAATGCTGTTGTCTCATGGTATAACGAAATCAACAAC
TACAATTTTACAACTGGCAAGTCAAACGGTGGAGATATTGGTCATTTCAC
ACAATTAGTTTGGGATTCTTCAACTAAATTGGGTTGCGGTGTTGCTAAAG
GAACAGGTGGAACTTATGTCGTTTCCAGATATTTGTCATCTGGTAACACC
AATATACACAACATGTTCATGGgttga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006532XLOC_006532Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011639-exon-sc0000131-1491911889:137218..137668TCONS_00011639-exon-sc0000131-1491911889:137218..137668Clytia hemisphaericaexon
TCONS_00011639-exon-sc0000131-1510915933:137218..137668TCONS_00011639-exon-sc0000131-1510915933:137218..137668Clytia hemisphaericaexon
TCONS_00011639-exon-sc0000131-1575043694:137218..137668TCONS_00011639-exon-sc0000131-1575043694:137218..137668Clytia hemisphaericaexon
TCONS_00011639-exon-sc0000131-1491911889:139549..139602TCONS_00011639-exon-sc0000131-1491911889:139549..139602Clytia hemisphaericaexon
TCONS_00011639-exon-sc0000131-1510915933:139549..139602TCONS_00011639-exon-sc0000131-1510915933:139549..139602Clytia hemisphaericaexon
TCONS_00011639-exon-sc0000131-1575043694:139549..139602TCONS_00011639-exon-sc0000131-1575043694:139549..139602Clytia hemisphaericaexon
TCONS_00011639-exon-sc0000131-1491911889:139746..139811TCONS_00011639-exon-sc0000131-1491911889:139746..139811Clytia hemisphaericaexon
TCONS_00011639-exon-sc0000131-1510915933:139746..139811TCONS_00011639-exon-sc0000131-1510915933:139746..139811Clytia hemisphaericaexon
TCONS_00011639-exon-sc0000131-1575043694:139746..139811TCONS_00011639-exon-sc0000131-1575043694:139746..139811Clytia hemisphaericaexon
TCONS_00011639-exon-sc0000131-1491911889:140200..140290TCONS_00011639-exon-sc0000131-1491911889:140200..140290Clytia hemisphaericaexon
TCONS_00011639-exon-sc0000131-1510915933:140200..140290TCONS_00011639-exon-sc0000131-1510915933:140200..140290Clytia hemisphaericaexon
TCONS_00011639-exon-sc0000131-1575043694:140200..140290TCONS_00011639-exon-sc0000131-1575043694:140200..140290Clytia hemisphaericaexon
TCONS_00011639-exon-sc0000131-1491911889:146280..146311TCONS_00011639-exon-sc0000131-1491911889:146280..146311Clytia hemisphaericaexon
TCONS_00011639-exon-sc0000131-1510915933:146280..146311TCONS_00011639-exon-sc0000131-1510915933:146280..146311Clytia hemisphaericaexon
TCONS_00011639-exon-sc0000131-1575043694:146280..146311TCONS_00011639-exon-sc0000131-1575043694:146280..146311Clytia hemisphaericaexon
TCONS_00011639-exon-sc0000131-1491911889:146645..146698TCONS_00011639-exon-sc0000131-1491911889:146645..146698Clytia hemisphaericaexon
TCONS_00011639-exon-sc0000131-1510915933:146645..146698TCONS_00011639-exon-sc0000131-1510915933:146645..146698Clytia hemisphaericaexon
TCONS_00011639-exon-sc0000131-1575043694:146645..146698TCONS_00011639-exon-sc0000131-1575043694:146645..146698Clytia hemisphaericaexon
TCONS_00011639-exon-sc0000131-1491911889:146831..147065TCONS_00011639-exon-sc0000131-1491911889:146831..147065Clytia hemisphaericaexon
TCONS_00011639-exon-sc0000131-1510915933:146831..147065TCONS_00011639-exon-sc0000131-1510915933:146831..147065Clytia hemisphaericaexon
TCONS_00011639-exon-sc0000131-1575043694:146831..147065TCONS_00011639-exon-sc0000131-1575043694:146831..147065Clytia hemisphaericaexon
TCONS_00011639-exon-sc0000131-1491911889:148679..149715TCONS_00011639-exon-sc0000131-1491911889:148679..149715Clytia hemisphaericaexon
TCONS_00011639-exon-sc0000131-1510915933:148679..149715TCONS_00011639-exon-sc0000131-1510915933:148679..149715Clytia hemisphaericaexon
TCONS_00011639-exon-sc0000131-1575043694:148679..149715TCONS_00011639-exon-sc0000131-1575043694:148679..149715Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011639-proteinTCONS_00011639-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000131supercontigsc0000131:137218..149715 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.058763	0.146072	0.295991	0.347954	0	0.772155	2.34516	6.39552	6.1415	1.1411	11.9312	4.84719	4.77655	0	0.429657	121.48	92.1928	6.96591	12.3077	1.94484	1.39645	1.59638	3.82979	1.18731	2.59035	1.70332	1.31027	0	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001283Allrgn_V5/Tpx1
IPR002413V5_allergen
IPR003582ShKT_dom
IPR014044CAP_domain
IPR018244Allrgn_V5/Tpx1_CS
IPR034113SCP_GAPR1-like
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005576 extracellular region
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00011639 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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