TCONS_00011684 (transcript) - C. hemisphaerica

Overview
NameTCONS_00011684
Unique NameTCONS_00011684
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1619

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00011684 ID=TCONS_00011684|Name=TCONS_00011684|organism=Clytia hemisphaerica|type=transcript|length=1619bp
atatttcaagATGCATAGCATACATTAATCTAATTAGTAGTCTTtgtgtt
tttcttatttttaagctagaaaaacattaaaaaaacattaattgGAAAAT
GAATTTACGTCATTTACTGAAATTCCTCTCAACGCAAGAGGTGGTGGACA
GAcTTGCTAACACTCCAGTAATCAGAAGACTCGCTCAAATGACACATTTT
ACTTATATTAGAGCATCTGAAGCAgGTCAAAAATCCATAGATAATATCAC
TGCCAAACAGCAGCAGAAAAATCAACTCTCAAATGATTCTTTTATGATGA
GTCGTTTCTTTCAACGCTTTGTACAAAATTTACGAAATGAAATTGAGAAA
AGTAATACGAAATTCAAGTAGCAACATGTAGCAAGAGGATTTGTGAATTG
GTTTGAATAGTGTGGAAGATGTGGCTTGGCTGGGATGATCTGCATGTAAA
GTAAATGATTATGACAAAATTAAAATATCCATCATTCGTCGATCGCTATT
TTACAAAGTATTACTTCAGGAATAAAGaAGCAAAAGATGAAGATCTTTGT
ATATTAGCCCATTCTAACAAaatCTGTCTTCTAACCCTTTCACCAATGCA
CAAAGCACTATCAGAAGGTCCAATAAAGAGTGTTAGTTATGAATTCAATG
GCAGAAATTTAGTGGAAGATGTTAAAAGTGTTCATGGCAAAAAGAAATTG
GACTCTATCAAAACTCATCCATACAGAATCATATGTCATATAGTCTCAGG
GAATAACACAACGTACAAAATAAGATgTGGCATCCAAGGGAAGCTGTTAG
AAGTCAacgaaaatttgcttaaaaatcCAACGATTCTCAATACAAAGCAT
GGTAGTGAAGGTTACATAGGAATTGTTCTTCACAGCAATAACAAAGAAGT
AGGATCTGCAAAAGAACTTCTCACCCAACAACAATATGATGAAATTAACC
TGAAAGAAGACGAAGATGGTCAtcagaatgaaaataaaaatatcaaagaa
gaGAATCTGGGAATTGACCAGGATAGTGATGTGAAAGAAAGTATAGATGG
ATCTGAAGGATTAAACGATTCTAACGAACCAGAACTGAAAAGAGTGAAAG
TCGAGGAATGAATGGGATGTTGTTCTTCTTTTCTTTGAAAGGACAGTTCA
TCCAATCAAGGAAACTGACCTGGTTTCTTTCACCCTTCGAAGAACATGGC
GCAACCCCAACAGCTTTATGGTGAACACCAGGTCTTCTTGATGCGTGTAT
ACAGAAGTCTGATCCAAGGTTACGAATCTGTAATGAGAATGGATGAAATG
TAAATAAAAGATGACTTCGCGTTTGGTGAATGATGTTGGATGATGCGGAT
TGTCATCTAttaattctttaaaaacatttaaaatgcGTTTATTTTGGTTC
ACCGCAAATATGTATCTTCATATTCATTTTCACAAAGATTGAATGTTTGG
GCATTGTTTATCTTTTAATACagtttataatttttatgaatttttctaTA
AGATTTTTTAACATATGCCAAACAATTTATTCACGACTTACATTTTTGTT
TAGTCTTCTGGCTAAATTAATCGCTTTGCATTTAACCGGTTAATTTATTT
ACCGagtgcaccaaaaaaa
Run BLAST on NCBI

protein sequence of TCONS_00011684-protein

>TCONS_00011684-protein ID=TCONS_00011684-protein|Name=TCONS_00011684-protein|organism=Clytia hemisphaerica|type=polypeptide|length=218bp
MIMTKLKYPSFVDRYFTKYYFRNKEAKDEDLCILAHSNKICLLTLSPMHK
ALSEGPIKSVSYEFNGRNLVEDVKSVHGKKKLDSIKTHPYRIICHIVSGN
NTTYKIRCGIQGKLLEVNENLLKNPTILNTKHGSEGYIGIVLHSNNKEVG
SAKELLTQQQYDEINLKEDEDGHQNENKNIKEENLGIDQDSDVKESIDGS
EGLNDSNEPELKRVKVEE
Run BLAST on NCBI

transcript from alignment at sc0000131:429076..436930-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00011684 ID=TCONS_00011684|Name=TCONS_00011684|organism=Clytia hemisphaerica|type=transcript|length=7855bp|location=Sequence derived from alignment at sc0000131:429076..436930- (Clytia hemisphaerica)
ATATTTCAAGATGCATAGCATACATTAATCTAATTAGTAGTCTTTGTGTT
TTTCTTATTTTTAAGCTAGAAAAACATTAAAAAAACATTAATTGGAAAAT
GAATTTACGTCATTTACTGAAGTAAGTGTTCCTTATAATATGTTCAGCTC
TCACTTGATAAAATTTCAGTACTGTACATCTATGATTTTATTAAAATTTC
TTCATTTTAAGAGATGGTTGATCAATTTTCTCCATGAAACTCTAAAAATT
CTTGAATTTCATACCAATAGAAATTTATGACTCACATGTTTTGTATTTGG
ATTTTTAGATTCCTCTCAACGCAAGAGGTGGTGGACAGAGTAAGTATAAT
GTATCTTTCACAGGGGTTAGAAATCTTAGTTTTTACTTTTCAAGAGACAT
CAAATGTTTCAAAACTTTTTGAGCAAACTCTCAATGAATACATGATAACA
GTCATTTTAAGAAATGTTTTTCAATATTTTTTCTATTTCAGCTTGCTAAC
ACTCCAGTAATCAGAAGACTCGCTCAAATGACACATTTTACTTATATTAG
AGCATCTGAAGCAGGTTTTTGTATATATTTATCACTACTGAGTTGCAATT
TCCTTTCTATAACAATCCTTACTACACAAGTGTTTGTCATTCATAGTAAC
CCAAGCTAACCTACTCTGAGATTGAAAATTAGGACTTAAGAGCCATTGTC
TGTAAGAATCAGGCAGTTTCTGAAAATTTAGGCGGTAATATCCTCAGATT
TTGTTCAAATTCAAATCAGGGGAAGATATTATGGTTCTGAGCAAATCCTG
AAAAAAAATTTTCATTTTGACCAAAACTCTGGAGTTTACGGCAATTTCAA
ATTTCCACTATTGAAAACAATACATGAGGAATTGCCTAAATTGAATCCAC
CCCTTCTCCTTGACACAATGAAGTTATCATTTTAAATCTTTAATCTTCAG
TCTAAAAGATTTGTATTACCTGCTTTTTAGCTTCATGATTTTCATTTCAT
GTTTTAGGTCAAAAATCCATAGATAATATCACTGCCAAACAGCAGCAGAA
AAATCAACTCTCAAATGATTCTTTTATGATGAGTCGTTTCTTTCAACGCT
TTGTACAAAATTTACGAAATGAAATTGAGAAAAGTAATACGAAATTCAAG
TAGCAACATGTAGCAAGAGGATTTGTGAATTGGTTTGAATAGTGTGGAAG
ATGTGGCTTGGCTGGGATGATCTGCATGTAAAGTAAATGGTACTTGTTTG
CAACTCATGAATTTAAAAACAAACTTCATAGGAATAGGAGTTTCATTGAA
GGATAATTTGAAGAATTTCAAGTTCTTATTTTGTGTGCTGTTTGCATTAT
GTTTCAGGCTGACCCTAAAAAAAGATTTCTAGTCCACCTGCCGCATGTAA
ATGTTCTATTTGTCTTTTTTTAAACATTTCAACCTTTTTGTAATTTTGTT
TGCGATATTTTTTCATTTTCAGCGTCTCGCGTGACTTTTTTTATCGTCCC
CCAGTGGACCGCAAAACAAATTTATATTTTAGGGTTGGCCTCACTAGCAA
GAATTCAAAATTTTCTCTAAGCTTCTTTGTCTTTGTCTTTCTTGTCTTTT
TACTGAAGTTTTTTTTAAAGGACTTTCTTTGTTCATTGTAAGATTGTAAC
AAGTAATTACTGGTGTGCTCAAAAGATGAACCAGGAATTTTTCTTATTTA
TCTAGAAACCTTGGATTTTTTCATTATGCTGAGAGAATTATTGTTGTTCA
ATTCTCCCATCAGCAAAGTTTGATATCCTCAATCAGCAAAGAAATATTGT
GTACATATTTATTTTAATTATTTTTATTTTTATTTTTGCCGAATGATTAC
ACTTAATTCTTCACGGAAATGTTTTTTTCTGCAAAGACTGTAACTAAGTA
AAAATATTTTATCTTGATTATAAAGATCTTACTTATTTCTTTTGTTTATT
TTATCTGTATATTTTGATTTTTACTGAAAGATATGAGATATTTTCTTTTG
GATGAGTTGCACTACCTTAAAGGGAGAAATGTTACTGAACTTAAGGGGTT
GCCCTCAAAATTTTGCAAATTTAAAAGTGAACCAAGATTTTTTTGCATGG
AAGAGAGTGCGTTGTGTCTCAAATGGTATCTACATGCTAGTACTTTTGCT
ATCACAAAATAATTGGAGATATTTCCAGCCCAGTCTCTAATTTGGTAGTT
AGAGATACTTCAATGTGTGATTGTGTGATGCTGCAAACAAAATCTTATTT
AGTCCAGTAATTCTCTGCGAAGATTTCAAACATGATAAAGAAGTTAATCT
CTTACTTCTTGTATTCATAGATTATGACAAAATTAAAATATCCATCATTC
GTCGATCGCTATTTTACAAAGTATTACTTCAGGAATAAAGGTGCCAATTA
TTTTATTATTATTCACATGTTCTCATATCTTTTTATGAATAATATTTTCA
GGATATAAATTAAGTTAGAGTCCAGCTCTATTTTTTTAGGTTAAAACTAT
ACTTTTGTAAGCAGACTCTAGCAGGCTTAGGTACCCTTTGCAGTTTGAAA
ACTTTTATGTTAATTCTCTATATTTTCTTAGTTATACCGTATAATGACTT
AAAAATTGATTGTATTCTTAGAAGCAAAAGATGAAGATCTTTGTATATTA
GCCCATTCTAACAAGTAAGGTTTTGTTTAATTGTGGGATATTTTAATTTA
GTCTCAGTCATTCTCGGTCATTAGGGGTAATGCTGATTACCTGATTGATT
GATGTACCGGAAAAAAGTATACAACTTTGTCGAGATATTGTGAGCTCCAG
GATTTAAATTTTTTGTTCATTCTTTTTTTATCGCATAGAGGATGCTCTAA
CTTGAATTTTGAGCTATCATACATTAGGTTTGAAAAAGTAATTCGAANNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAACTTTTCTCTT
GGCACTTACCTTCTTTACACATAAAAATACCAAAAAATGCAACTGTGTTC
ATCAAAACTCGTTACGGAATTTAAGAATATGGTAAAACAAGCAATTCCCA
TGTGGAATTACCATTACCATTACCATTTTTGGTAAAGCTGAAAAAGTTTT
TTGGAAATCTCCAGGAGAGGTGTGGTGTGCCACGTGAGAAAATTTTTGAA
TCACCATTCCTCAACTATTTGCTCAAAGAACTTGGGTCTGCATTGAGTTT
GCTGGTGTTGGAAATATTCATGACGTGTAAATAAGATGGACAAACCGTTA
GCAAAATATAAGATAGGAGAAAAAAGAATCAAAAAGACAATTAAATTGTG
TTTTTGTCATTTTGTCTTATTTATAGCGTGATTGCTGTTTTTAATGATTT
CTTGAAATTTCGACATGGAAAAAAAGTCAGTTTTTTGGAAATAACTTTCG
AACTACTTTTTCAAATTTAATGTATAATAGCTCAAAATTCAAGTTAGAGC
ATCCTCTATACAATAAAAAAAGAATGAACAAAAAATATAGATCCTGAAGC
TCACAATATCTCGACAAACCTGTATACTTTTTTTTGGTGCACCCTGTATA
TGGATAACAATTATAGAGTACAAAATCTTTCATTTTTTACTGACTGAAAA
AATGATGATACCATATTTTTACACTACATTCCACACCTACATTTTTATTT
TATAGAATCTGTCTTCTAACCCTTTCACCAATGCACAAAGCACTATCAGA
AGGTCCAATAAAGAGTGTTAGTTATGAATTCAATGGCAGAAATTTAGTGG
AAGATGTTAAAAGTGTTCATGGCAAAAAGAAATTGGACTCTATCAAAACT
CATCCATACAGAATCATATGTCATATAGTCTCAGGGAATAACACAACGTA
CAAAATAAGATGGTATTGTTATTATTTTTAAACACCAATTTGAGAGGATA
GGATTTAGGATAGAAGTTTATAAGAAAAATAATTCGTCAGAATGTCTGAA
ATTATTGCATTGACTTTATAAAAACAAGGAAATTTGACGAAAAACGTTGT
CCCCTCCCCGGAAACTCCAACATCTCCTCACACTTTCAGGGTCAATAGGT
GTGTAAAGATCGTTGAGGTTAAAATTTGGCAAAACTTGGCTGCCAAATTT
TACAAAATCTTTCATTCACCAAATTGAGCCCCCACTTTAAACTCATTTGT
CCTTGTAGAGCTCAAACCTAACCCCCTACCGTGTAGCTTTTTGTGCAAGG
TTCAATAGTTGTATATTGGGTGTCATTAATAATTTGTTATTAAAGGGGTA
CATAAATCTATAAAAAATGAACGTCATCAAAATTACAGGAATATTTTTTA
CATTTGACTCTCAATTTATTATAAGCTGACTAAAATTATCTTTGCAATAG
TGGCATCCAAGGGAAGCTGTTAGAAGTCAACGAAAATTTGCTTAAAAATC
CAACGATTCTCAATACAAAGGTAAATAACATAATCAAGATTATACGCCTT
AAAAGTATAATTTAATTAAAATTAGTTTCTCTGGTACATCAATTTGAAAC
TGTTTTGTTCGAATGAATTTCAACTGTTATAAAAATTATTGTGTTATTAG
ATAATATCTAGCTCTTATTTTCACATTAGAAAAACCTTCCTCAACATAAT
TTTACAGATTTGATCCAAAAATTGCAAAATAGAAATAGGTTCCTAAAGGT
TCCTTTCGTTTATTTGGGGGTGGGAAACGAAGCTACTAAAAACCGTTCAA
TTTACACTTTTTGTATTCGGCAGCATGGTAGTGAAGGTTACATAGGAATT
GTTCTTCACAGCAATAACAAAGAAGTAGGATCTGCAAAAGAACTTCTCAC
CCAACAACAATATGATGAAATTAACCTGAAAGAAGACGAAGATGGTCATC
AGAATGAAAATAAAAATATCAAAGAAGAGAATCTGGGAATTGACCAGGAT
AGTGATGTGAAAGAAAGTATAGATGGATCTGAAGGATTAAACGATTCTAA
CGAACCAGAACTGAAAAGAGTGAAAGTCGAGGAATGAATGGGATGTTGTT
CTTCTTTTCTTTGAAAGGTATGTGAATTGATACTTAATGCAAAATAGTTT
GAAATTTTAAAGACTGGATGAGAATAAATAGCTACTTTAATGGGATAAAC
TTTCGCGGGGACTTAATTTCCACGATTTTGTGACTTTCACTGTCAAATCA
TGCATGTTGGTTGTTGAAATACACATTATTTGCGCCTCTTTGATGCAAGT
AACCATTCAAAAAGTATTTATTTGACATATTTTGAGTTTTGTTTAGAAAT
ATTTCGCGGATGAGGCCCTTCCAAATCCGCGAAATCCGCGAAATTTAATC
CCCGAGAAAGTTTATCCCATTATAAAGTACTGGATAAACAAGCTCCAAAT
AAGTCTTTAGCAATAGAACAGTGTTTCCAGCTGTTCATGTTAGATCATTT
TTCTTCAGATTTTATCCATCATTCCCTCGGCGCCGACCATTTAAACGATT
TACATTTTCCATGCTAATAATAATCCAGATCTGTTTTGAAATATCCATAT
TTTCGAGTGTCTCAAACTTATCAACCCACACATTGTAATATTGCCATCAA
TCATCCACCATTAGCATAACGTGTAAATCTCCATCGTTGTGAATTTTTCT
TTTCATTGCACTTCTCCACGGTTAGAAGATCGCTTCTTCCACTTTTACTA
TTTTGACCAGTAATTGCCAGACACATGCTTGAGACTTGATGGATTATCAA
ACCCTGAAATGAATTGAAAAAAATGAGAGAAATTCATCAATCATGTACGT
TAAGATCAAAAGTCTTTCATTTAAATTATCTTTCTAAGAATTTAAAGGTC
CAATTTTTTGGACACTTTGAGTGTGTCATATTTCGATTTTGGAATTTTGG
AATTTTTAGAAAGACTGTATTGTTTCTTATGGTTCGCACATATCCGGCAA
CCATTTGGTCCTTGACTTTTCTGCACAATTGAAACCTCTACTTTAATTTT
TCAATTTTACTGACCGATTCCTTATGGTGTTTCCATATTTGGTTACCACC
TAGACCATGACACCCCCATAATTCAACGTGTCTTTTTGTGTTTGAGAAGG
AAAAGTCGAGACACTTTTGATCGTCATATACCATTTCGTCATTTTTCGTC
CAAACGAAATTCTGAAGAGAAGAGAAGAATGGGCTCTTCTAGAAAAAATC
CGTTCATGGGGGGTGGAGGATATATTATTTTTTTCATGAATTACCCCTGG
ACATTTCGATTTTTAACCCCCTGGACACGGGTTATACCCCTGGACAAACA
TCAAATCAACCCCGTGGACACAAAAAATTACCCCTGGACATTTCGATTTT
TAACCCCCTGGACACGGGTTATACCCCTGGACAAACATCAAATCAACCCC
GTGGACACAAAAAATTACCCCTGGACATTGGAATTTACCCCCTGGACATT
ACAATTTTTTGGTATTTTTTCAATACCCCTGGACAATTCATCCTCCACCC
CCCATGATCGGATTTTTTCTGGAAGAGCCCAATATGCTATATGTTTCCAA
TATTTGTATATGAATTTCATGACATTGAATAACCTGAAGAAGGTTAAAGA
ATGCTTTGTTTTATTGTGTTGTGTGGCCCTGAAGGTGCATTGTTTTGAAA
TTTTTTGTCAATTTTAAGGTATAAAAGGTCAGGTTTTCCAGAAACTTTGT
CCTGAAAAGTTCGATTTTCTCACTTCTTACATCCTTCAGAGAAATTTTTC
CTTTTGTTAGGGTATTACATCTTGATGGAACTCTTTCAGAAGGATGAAAT
CGGATATGCCCATTGAGTTATTTCAAATAACTCAGAGAATTCATAGTAAT
GTGTTTTGTTTCATCCTCAATCGTTCGGAGCATCGTATTTGTGGATTACG
TATAAAGTTCTGGCAAGTTGCATTTTCTATTTAAGAGTAAGAAAATCTTC
AATTTTTCTGCATCGGAATAATTGAAACAATACTAATTAACCACAAGTCT
GTTATTCACAAGCTAAATTTTCGGATTTAAAAGTTTGTTAAACTACAATC
TTTTGGAAAATATCGGGAGACAAAAAATCTACAAAAATTCAGACTCCCAT
CCCCAAAAACAATGTCGGGTGCAATAGCAGCTCGTTTCCTTGAACAGCAT
TGTTTTGGGGGAAGGGGGAGGAGTGATTATGACTCAAGTCAACCATGCTC
CCTGCTTTCACGCCCTTCACCCTTAATGAGGAAGAAAAGTGTACGACATT
TTTGGATATTTTTGCTTTTCATTTTAGGACAGTTCATCCAATCAAGGAAA
CTGACCTGGTTTCTTTCACCCTTCGAAGAACATGGCGCAACCCCAACAGC
TTTATGGTGAACACCAGGTCTTCTTGATGCGTGTATACAGAAGTCTGATC
CAAGGTTACGAATCTGTAATGAGAATGGATGAAATGTAAATAAAAGATGA
CTTCGCGTTTGGTGAATGATGTTGGATGATGCGGATTGTCATCTATTAAT
TCTTTAAAAACATTTAAAATGCGTTTATTTTGGTTCACCGCAAATATGTA
TCTTCATATTCATTTTCACAAAGATTGAATGTTTGGGCATTGTTTATCTT
TTAATACAGTTTATAATTTTTATGAATTTTTCTATAAGATTTTTTAACAT
ATGCCAAACAATTTATTCACGACTTACATTTTTGTTTAGTCTTCTGGCTA
AATTAATCGCTTTGCATTTAACCGGTTAATTTATTTACCGAGTGCACCAA
AAAAA

Coding sequence (CDS) from alignment at sc0000131:429076..436930-

>TCONS_00011684 ID=TCONS_00011684|Name=TCONS_00011684|organism=Clytia hemisphaerica|type=CDS|length=3942bp|location=Sequence derived from alignment at sc0000131:429076..436930- (Clytia hemisphaerica)
CATGGTAGTGAAGGTTACATAGGAATTGTTCTTCACAGCAATAACAAAGA
AGTAGGATCTGCAAAAGAACTTCTCACCCAACAACAATATGATGAAATTA
ACCTGAAAGAAGACGAAGATGGTCATCAGAATGAAAATAAAAATATCAAA
GAAGAGAATCTGGGAATTGACCAGGATAGTGATGTGAAAGAAAGTATAGA
TGGATCTGAAGGATTAAACGATTCTAACGAACCAGAACTGAAAAGAGTGA
AAGTCGAGGAATGATGGCATCCAAGGGAAGCTGTTAGAAGTCAACGAAAA
TTTGCTTAAAAATCCAACGATTCTCAATACAAAGAATCTGTCTTCTAACC
CTTTCACCAATGCACAAAGCACTATCAGAAGGTCCAATAAAGAGTGTTAG
TTATGAATTCAATGGCAGAAATTTAGTGGAAGATGTTAAAAGTGTTCATG
GCAAAAAGAAATTGGACTCTATCAAAACTCATCCATACAGAATCATATGT
CATATAGTCTCAGGGAATAACACAACGTACAAAATAAGATGAAGCAAAAG
ATGAAGATCTTTGTATATTAGCCCATTCTAACAAATTATGACAAAATTAA
AATATCCATCATTCGTCGATCGCTATTTTACAAAGTATTACTTCAGGAAT
AAAGATGCATGGTAGTGAAGGTTACATAGGAATTGTTCTTCACAGCAATA
ACAAAGAAGTAGGATCTGCAAAAGAACTTCTCACCCAACAACAATATGAT
GAAATTAACCTGAAAGAAGACGAAGATGGTCATCAGAATGAAAATAAAAA
TATCAAAGAAGAGAATCTGGGAATTGACCAGGATAGTGATGTGAAAGAAA
GTATAGATGGATCTGAAGGATTAAACGATTCTAACGAACCAGAACTGAAA
AGAGTGAAAGTCGAGGAATGATGGCATCCAAGGGAAGCTGTTAGAAGTCA
ACGAAAATTTGCTTAAAAATCCAACGATTCTCAATACAAAGAATCTGTCT
TCTAACCCTTTCACCAATGCACAAAGCACTATCAGAAGGTCCAATAAAGA
GTGTTAGTTATGAATTCAATGGCAGAAATTTAGTGGAAGATGTTAAAAGT
GTTCATGGCAAAAAGAAATTGGACTCTATCAAAACTCATCCATACAGAAT
CATATGTCATATAGTCTCAGGGAATAACACAACGTACAAAATAAGATGAA
GCAAAAGATGAAGATCTTTGTATATTAGCCCATTCTAACAAATTATGACA
AAATTAAAATATCCATCATTCGTCGATCGCTATTTTACAAAGTATTACTT
CAGGAATAAAGATGCATGGTAGTGAAGGTTACATAGGAATTGTTCTTCAC
AGCAATAACAAAGAAGTAGGATCTGCAAAAGAACTTCTCACCCAACAACA
ATATGATGAAATTAACCTGAAAGAAGACGAAGATGGTCATCAGAATGAAA
ATAAAAATATCAAAGAAGAGAATCTGGGAATTGACCAGGATAGTGATGTG
AAAGAAAGTATAGATGGATCTGAAGGATTAAACGATTCTAACGAACCAGA
ACTGAAAAGAGTGAAAGTCGAGGAATGATGGCATCCAAGGGAAGCTGTTA
GAAGTCAACGAAAATTTGCTTAAAAATCCAACGATTCTCAATACAAAGAA
TCTGTCTTCTAACCCTTTCACCAATGCACAAAGCACTATCAGAAGGTCCA
ATAAAGAGTGTTAGTTATGAATTCAATGGCAGAAATTTAGTGGAAGATGT
TAAAAGTGTTCATGGCAAAAAGAAATTGGACTCTATCAAAACTCATCCAT
ACAGAATCATATGTCATATAGTCTCAGGGAATAACACAACGTACAAAATA
AGATGAAGCAAAAGATGAAGATCTTTGTATATTAGCCCATTCTAACAAAT
TATGACAAAATTAAAATATCCATCATTCGTCGATCGCTATTTTACAAAGT
ATTACTTCAGGAATAAAGATGCATGGTAGTGAAGGTTACATAGGAATTGT
TCTTCACAGCAATAACAAAGAAGTAGGATCTGCAAAAGAACTTCTCACCC
AACAACAATATGATGAAATTAACCTGAAAGAAGACGAAGATGGTCATCAG
AATGAAAATAAAAATATCAAAGAAGAGAATCTGGGAATTGACCAGGATAG
TGATGTGAAAGAAAGTATAGATGGATCTGAAGGATTAAACGATTCTAACG
AACCAGAACTGAAAAGAGTGAAAGTCGAGGAATGATGGCATCCAAGGGAA
GCTGTTAGAAGTCAACGAAAATTTGCTTAAAAATCCAACGATTCTCAATA
CAAAGAATCTGTCTTCTAACCCTTTCACCAATGCACAAAGCACTATCAGA
AGGTCCAATAAAGAGTGTTAGTTATGAATTCAATGGCAGAAATTTAGTGG
AAGATGTTAAAAGTGTTCATGGCAAAAAGAAATTGGACTCTATCAAAACT
CATCCATACAGAATCATATGTCATATAGTCTCAGGGAATAACACAACGTA
CAAAATAAGATGAAGCAAAAGATGAAGATCTTTGTATATTAGCCCATTCT
AACAAATTATGACAAAATTAAAATATCCATCATTCGTCGATCGCTATTTT
ACAAAGTATTACTTCAGGAATAAAGATGCATGGTAGTGAAGGTTACATAG
GAATTGTTCTTCACAGCAATAACAAAGAAGTAGGATCTGCAAAAGAACTT
CTCACCCAACAACAATATGATGAAATTAACCTGAAAGAAGACGAAGATGG
TCATCAGAATGAAAATAAAAATATCAAAGAAGAGAATCTGGGAATTGACC
AGGATAGTGATGTGAAAGAAAGTATAGATGGATCTGAAGGATTAAACGAT
TCTAACGAACCAGAACTGAAAAGAGTGAAAGTCGAGGAATGATGGCATCC
AAGGGAAGCTGTTAGAAGTCAACGAAAATTTGCTTAAAAATCCAACGATT
CTCAATACAAAGAATCTGTCTTCTAACCCTTTCACCAATGCACAAAGCAC
TATCAGAAGGTCCAATAAAGAGTGTTAGTTATGAATTCAATGGCAGAAAT
TTAGTGGAAGATGTTAAAAGTGTTCATGGCAAAAAGAAATTGGACTCTAT
CAAAACTCATCCATACAGAATCATATGTCATATAGTCTCAGGGAATAACA
CAACGTACAAAATAAGATGAAGCAAAAGATGAAGATCTTTGTATATTAGC
CCATTCTAACAAATTATGACAAAATTAAAATATCCATCATTCGTCGATCG
CTATTTTACAAAGTATTACTTCAGGAATAAAGATGCATGGTAGTGAAGGT
TACATAGGAATTGTTCTTCACAGCAATAACAAAGAAGTAGGATCTGCAAA
AGAACTTCTCACCCAACAACAATATGATGAAATTAACCTGAAAGAAGACG
AAGATGGTCATCAGAATGAAAATAAAAATATCAAAGAAGAGAATCTGGGA
ATTGACCAGGATAGTGATGTGAAAGAAAGTATAGATGGATCTGAAGGATT
AAACGATTCTAACGAACCAGAACTGAAAAGAGTGAAAGTCGAGGAATGAT
GGCATCCAAGGGAAGCTGTTAGAAGTCAACGAAAATTTGCTTAAAAATCC
AACGATTCTCAATACAAAGAATCTGTCTTCTAACCCTTTCACCAATGCAC
AAAGCACTATCAGAAGGTCCAATAAAGAGTGTTAGTTATGAATTCAATGG
CAGAAATTTAGTGGAAGATGTTAAAAGTGTTCATGGCAAAAAGAAATTGG
ACTCTATCAAAACTCATCCATACAGAATCATATGTCATATAGTCTCAGGG
AATAACACAACGTACAAAATAAGATGAAGCAAAAGATGAAGATCTTTGTA
TATTAGCCCATTCTAACAAATTATGACAAAATTAAAATATCCATCATTCG
TCGATCGCTATTTTACAAAGTATTACTTCAGGAATAAAGATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006556XLOC_006556Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011684-proteinTCONS_00011684-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011684-exon-sc0000131-1575043694:436810..436930TCONS_00011684-exon-sc0000131-1575043694:436810..436930Clytia hemisphaericaexon
TCONS_00011684-exon-sc0000131-1575043694:436592..436622TCONS_00011684-exon-sc0000131-1575043694:436592..436622Clytia hemisphaericaexon
TCONS_00011684-exon-sc0000131-1575043694:436367..436439TCONS_00011684-exon-sc0000131-1575043694:436367..436439Clytia hemisphaericaexon
TCONS_00011684-exon-sc0000131-1575043694:435692..435923TCONS_00011684-exon-sc0000131-1575043694:435692..435923Clytia hemisphaericaexon
TCONS_00011684-exon-sc0000131-1575043694:434541..434610TCONS_00011684-exon-sc0000131-1575043694:434541..434610Clytia hemisphaericaexon
TCONS_00011684-exon-sc0000131-1575043694:434267..434309TCONS_00011684-exon-sc0000131-1575043694:434267..434309Clytia hemisphaericaexon
TCONS_00011684-exon-sc0000131-1575043694:432919..433125TCONS_00011684-exon-sc0000131-1575043694:432919..433125Clytia hemisphaericaexon
TCONS_00011684-exon-sc0000131-1575043694:432361..432430TCONS_00011684-exon-sc0000131-1575043694:432361..432430Clytia hemisphaericaexon
TCONS_00011684-exon-sc0000131-1575043694:431764..432057TCONS_00011684-exon-sc0000131-1575043694:431764..432057Clytia hemisphaericaexon
TCONS_00011684-exon-sc0000131-1575043694:429076..429553TCONS_00011684-exon-sc0000131-1575043694:429076..429553Clytia hemisphaericaexon
TCONS_00011684-exon-sc0000131-1510915933:436810..436930TCONS_00011684-exon-sc0000131-1510915933:436810..436930Clytia hemisphaericaexon
TCONS_00011684-exon-sc0000131-1510915933:436592..436622TCONS_00011684-exon-sc0000131-1510915933:436592..436622Clytia hemisphaericaexon
TCONS_00011684-exon-sc0000131-1510915933:436367..436439TCONS_00011684-exon-sc0000131-1510915933:436367..436439Clytia hemisphaericaexon
TCONS_00011684-exon-sc0000131-1510915933:435692..435923TCONS_00011684-exon-sc0000131-1510915933:435692..435923Clytia hemisphaericaexon
TCONS_00011684-exon-sc0000131-1510915933:434541..434610TCONS_00011684-exon-sc0000131-1510915933:434541..434610Clytia hemisphaericaexon
TCONS_00011684-exon-sc0000131-1510915933:434267..434309TCONS_00011684-exon-sc0000131-1510915933:434267..434309Clytia hemisphaericaexon
TCONS_00011684-exon-sc0000131-1510915933:432919..433125TCONS_00011684-exon-sc0000131-1510915933:432919..433125Clytia hemisphaericaexon
TCONS_00011684-exon-sc0000131-1510915933:432361..432430TCONS_00011684-exon-sc0000131-1510915933:432361..432430Clytia hemisphaericaexon
TCONS_00011684-exon-sc0000131-1510915933:431764..432057TCONS_00011684-exon-sc0000131-1510915933:431764..432057Clytia hemisphaericaexon
TCONS_00011684-exon-sc0000131-1510915933:429076..429553TCONS_00011684-exon-sc0000131-1510915933:429076..429553Clytia hemisphaericaexon
TCONS_00011684-exon-sc0000131-1491911889:436810..436930TCONS_00011684-exon-sc0000131-1491911889:436810..436930Clytia hemisphaericaexon
TCONS_00011684-exon-sc0000131-1491911889:436592..436622TCONS_00011684-exon-sc0000131-1491911889:436592..436622Clytia hemisphaericaexon
TCONS_00011684-exon-sc0000131-1491911889:436367..436439TCONS_00011684-exon-sc0000131-1491911889:436367..436439Clytia hemisphaericaexon
TCONS_00011684-exon-sc0000131-1491911889:435692..435923TCONS_00011684-exon-sc0000131-1491911889:435692..435923Clytia hemisphaericaexon
TCONS_00011684-exon-sc0000131-1491911889:434541..434610TCONS_00011684-exon-sc0000131-1491911889:434541..434610Clytia hemisphaericaexon
TCONS_00011684-exon-sc0000131-1491911889:434267..434309TCONS_00011684-exon-sc0000131-1491911889:434267..434309Clytia hemisphaericaexon
TCONS_00011684-exon-sc0000131-1491911889:432919..433125TCONS_00011684-exon-sc0000131-1491911889:432919..433125Clytia hemisphaericaexon
TCONS_00011684-exon-sc0000131-1491911889:432361..432430TCONS_00011684-exon-sc0000131-1491911889:432361..432430Clytia hemisphaericaexon
TCONS_00011684-exon-sc0000131-1491911889:431764..432057TCONS_00011684-exon-sc0000131-1491911889:431764..432057Clytia hemisphaericaexon
TCONS_00011684-exon-sc0000131-1491911889:429076..429553TCONS_00011684-exon-sc0000131-1491911889:429076..429553Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000131supercontigsc0000131:429076..436930 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
13.9158	15.9652	16.7156	13.1882	10.4425	6.20347	9.16333	13.0463	14.4851	11.1398	9.95062	8.58865	6.08107	7.31612	7.98853	7.3694	16.85	15.7472	6.72123	4.84319	15.1767	13.3784	20.0524	18.6712	8.98977	10.1589	10.0184	8.40503	11.3456	9.63602
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR033753GCV_H/Fam206
IPR011053Single_hybrid_motif
Blast
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BLAST of TCONS_00011684 vs. Swiss-Prot (Human)
Match: F206A (Protein Simiate OS=Homo sapiens GN=FAM206A PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.909e-20
Identity = 64/161 (39.75%), Postives = 93/161 (57.76%), Query Frame = 2 
Query:  479 PSFVDRYFTKYYFRNKEAK-DEDLCILAHSNKICLLTLSPMHKALSEG-PIKSVSYEFNGRNLVEDVKSVHGKKKLDSIKTHPYRIICHIVSGNNTTYKIRCGIQGXXXXXXXXXXXXPTILNTKHGSEGYIGIVLHSNNKEVGSAKELLTQQQYDEINLK 955
            PS VDRYFT++Y  + + K  ED CIL HSN+IC++TL+  H  L  G  IKS+SY+ +  N       V GK K  +        +C I   +   Y +   ++G+L+EVNEN+L  P+IL  K  +EGYI +VL    +     + LLTQ+QY+E+ +K
Sbjct:   13 PSLVDRYFTRWYKPDVKGKFCEDHCILQHSNRICVITLAESHPVLQSGKTIKSISYQIST-NCSRLQNKVSGKFKRGAQFLTELAPLCKIYCSDGEEYTVSSCVRGRLMEVNENILHKPSILQEKPSTEGYIAVVLPKFEESKSITEGLLTQKQYEEVMVK 172
The following BLAST results are available for this feature:
BLAST of TCONS_00011684 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
F206A1.909e-2039.75Protein Simiate OS=Homo sapiens GN=FAM206A PE=1 SV... [more]
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