|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00011826 ID=TCONS_00011826|Name=TCONS_00011826|organism=Clytia hemisphaerica|type=transcript|length=1309bp
ctagagtaaaaaagagaaatcaaaacaaaaatattaaaacgtGAAGGAAa
tcaatatcaaaacaaaaaataacaaggCATCGATCAATCTCAGATGTTAC
ATCTTATGTTATAAGCAGTGCTACAACTGAGtGCTAAATACAAACAGAAA
AGGCGATGTCGATGAAGCACAGCAGATCACCAGATCCATTGGACGACACA
CCTTACCTTATACCTCCACCTGACGACGAGGCTCGAAAATGTGGTTGTAA
GAACGAAACATTTCGTCTGGCGATTGGCCTGGTGTTAGTTTTCATGATCG
CTATCTCATGGACAGGAGCTACACAGTTTGGTCGAAGTGTTTATGATGTC
AATTTTGATGCTCCTTACCTAACTGCATGGTTTGTCATGTGTTTTCAATG
CGTCATTTTTCCACTGTCATTGCTTGCTTTCGTTGGGCGGAGAAAGAAGT
TGCGTGAATACTGGAATAAATCAATGGAATTATTTGGTCCAGATGGCTTA
ACACTTCGTGGTTTCCTCAAATTCGGGCTTATCTATGCGCTACCCCTAAA
CATCATTAGTATCTTGGCAAACTATTTGTTCTATCGAGCACTGAAATCGT
TGAATCCAAGCACAGTGGCGTCAATTTTCTCAGCTCAAAGTGCTTTCGTT
TATGCATTATCTATCATATTTCTAAAAGAGAAATTCTTCTTTACACGTCT
AACTTCGGTGCTATTATCAGTTGGAGGTATTGTCTTAATGGGACACGGTG
AAGGCTTCCAGAATGCGTCGACTGTTGGAGTAATATTGACCGCAATTGCT
GCCTTGTGTGCTGCAATTTTTCAGGTTGCATTCAAACGTTCATTTGGTTT
CCCGGCTACCGGACAAGTAGCAGTGATTGTCACCTACATTGGGTTGACCA
ATCTTGTCGTACTACCATACTTTATCTTCATATTCAAGCATGTTGGTTGG
GAACATTTTATATGGAGTGCTTTACCATGGAAGCTTCTCATCGGTACTGC
TCTATTAGGTCTCATGTTCAATTTCTTGTTAATTTTCGGTGTCGCTTATA
CCTATCCGCTGTTCATATCTATTGGCAATCTGATTGGTGTTCCCATGAAT
GCAGCCATAGATGCCATTTTCCGTGGAGAggattttgatgcttttaagaT
TGCAGCTTTCTTTATCATTGTAACCGGATTCATGCTGTTGTTGATTCCTA
TATCAagaattgaatattttgaacGAGAAGTTTGCTGCAAAAAATGTAGT
AAAAGAAATGATGAAGAAGACCTTGAATGATTTAGagtttgtatttattt
tgaaattga Run BLAST on NCBI protein sequence of TCONS_00011826-protein >TCONS_00011826-protein ID=TCONS_00011826-protein|Name=TCONS_00011826-protein|organism=Clytia hemisphaerica|type=polypeptide|length=374bp
MSMKHSRSPDPLDDTPYLIPPPDDEARKCGCKNETFRLAIGLVLVFMIAI
SWTGATQFGRSVYDVNFDAPYLTAWFVMCFQCVIFPLSLLAFVGRRKKLR
EYWNKSMELFGPDGLTLRGFLKFGLIYALPLNIISILANYLFYRALKSLN
PSTVASIFSAQSAFVYALSIIFLKEKFFFTRLTSVLLSVGGIVLMGHGEG
FQNASTVGVILTAIAALCAAIFQVAFKRSFGFPATGQVAVIVTYIGLTNL
VVLPYFIFIFKHVGWEHFIWSALPWKLLIGTALLGLMFNFLLIFGVAYTY
PLFISIGNLIGVPMNAAIDAIFRGEDFDAFKIAAFFIIVTGFMLLLIPIS
RIEYFEREVCCKKCSKRNDEEDLE Run BLAST on NCBI transcript from alignment at sc0000133:163039..171958+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00011826 ID=TCONS_00011826|Name=TCONS_00011826|organism=Clytia hemisphaerica|type=transcript|length=8920bp|location=Sequence derived from alignment at sc0000133:163039..171958+ (Clytia hemisphaerica)
ctagagtaaaaaagagaaatcaaaacaaaaatattaaaacgtGAAGGAAa
tcaatatcaaaacaaaaaataacaaggCATCGATCAATCTCAGATGTTAC
ATCTTATGTTATAAGCAGTGCTACAACTGAGGTAATTAATTTGATCTTTC
ctttatttgtttttcaattttcagtatatttttaacttttttttgtctaG
AATTATTCAATATGTTGTTGATTTTCACCATTGACAGAAGAATTACGGTC
AGTACATTCCTTTTAAAAAGTttagagcccccccccccccccccNAGAAT
TACGGTCAGTACATTCCtttgagccccccccccagtgaCTTTTTCATATT
TCATCATTTAGTCATGAATACTTCCATTgggccattctattttatttcca
TACAAGGGGttgacgaacatttccagggggtaatccgagtagaatttcca
gggggtctaaaggagtggttttctatttttccagggggtaaaaacttgtt
tttaaatttccaggggtttcagaatgattttagttcgtccaccctcactt
aaaagataggaaaaattttgaaagaaagatgAAATTGGATTTTTCAAGTG
GGGGTTGGAAGGTTTTATAAATTCAAGTAGGGTTGCCCAAGAAGGTGGCG
TTTAAGTAGTCCTCGATTTTTAAGTGGGGGCAAACCTATGCAGGTGGGGG
TGAATTTTTTTAGGTAGGCGCTGGACGGGTGTTGCCCACTATGTATTCTG
AATCATCTTTCAAACGGAGATACTTCAAATAGTACGAacgtttcttttaa
aaagtttatgtttttcTCATGATTATTGtagtattcaatttttttcagag
GCTAGAATCTGTTCTAACAAGTTTGAGAGCGCAAtgacttttttcatatt
ttgtcaTCAATACTCTTTAATACTTACATGCTTCCAACGGTGATACTCTA
TAAAGTATGAGCGTCTCTTTTACTTTTAAGATTTATGGTGTTTTCGTGAT
TTAAAGAATTACCGTATAACTTCGAATAAACGACCCCTGCTTTTAAACAA
CCCTCCCCACATCGAATAAATACTCCTCCATAAAGGACAATAAACAATAA
ACACCCCTTCGGATAAACGCTCCCTCTAGGAGACTTCTAAAAGActagaa
aatttgataaacGTCCGGGGAGTTTATTCGAAGTGATACGGTAAGAAATT
GCGGGACCCAGTAGAGGGCTagccgaaggctcccttttctctagctgtct
acccgagaTTAGGGGAGGGCGCCTGGGGGaggacttaggcaaaattgggt
acgggacgtgccgctggtcagggtcccttttttaggctctgaagatatct
gacatcGTCCCAAatctactaattttcaagatgtgcatctgacagggtcc
acttttggttatttggacaatttttcagggtaaaaattagaaatttgttc
cgtttttcgtctacttttagtcatttttgccacttgttAGGGTGGAAATT
GGAAAAGTTTTTCGTTCTGaccattttaccaaaaattcatatctgacagg
gtcaactTTATGAACTCCAGCGGCGCGTCCATGTCGTCCGTCAAGGTCAG
TGGGCGCTACtcttttccctggatttctcaaACTTCATGTTATTATTGCA
GCATTCGATTTCTTTTCAGAGGATAGGATCTGTTGCAACAAGATTTTGTG
ATTACAAGATGTGTAAATTTCTACAGCATCTCAAATGTTTACTTTTCAAG
ATTTTCCTTGATACATTTCCTGTCATTTGTTTTATGTGTGTCATATGATA
TTTGCCATACATTTCTCTAAAATAACATCATCTTAACTCTCATGGACTTT
GGTTTTGCGTGTTTCGTGTATGTTTAAGTCTAGGTACACGTCTAGGTTAT
GTTGACTTTTTTCTGCAAAATGGTTCTCTAATTTgagtatttttgaagga
ataaGTTCTCTCGCAGAAGTTCTTGTAGATACTAACTCTTAACTCGAAGA
GGAATTTTTATCTACTCAGCAAAACTAAACAGTGATAacgctacaatcat
ggtcagaatatgttgacatttctgggtattttagcattttgcaaaattaa
aAGTTCCGGCAAGAATGACCTTTTCAGGCTTGCTACTTTATctaatcgaa
tatttcgatttggaAGAGGGGTACACTGTTCTTAAGTCTCTGATGTTATA
ACTCGGAGTTAAAGCTCTACTTTTGAACCCTTAGTTAAGGCACTTAAAAA
CTATATgcggtttttaaaatttttagtaaTATTCCTCTGCTGCCTTAAAT
TTTGCCGATGATTATAGTTATTCAGTACAAAGCCAGGTTGTGCTTCAGAG
GGCGAAGTAACAGATTATTTTTGAACCATTATGTAGATACTATCAGCAAC
TAAATAAATATATCTTTGAATAAGCATTTTCTCGTTATACCTAGACATAT
AAAGTGTCACGTCttcttcccagctggcacacaacgttgttttaacgttc
aaataacgttatatggacgttatgaatgtcacatggacgttgttttgacg
ttgtgtgctgTCTGGGTTAGGATATATGAAATTTTATGCTTACTTCAGGC
AGATTTGAGACTTAATCAGTTAATCCAGACGTTAAAGGGCAATGGTGATC
TGCTTCGTGACCCTTAtgcaagtttagaaaaatattttcttttcaatggG
CTATTCTATACCCCCTATATTGAGGAGATGTGACGgacagggtggtctgg
aaaataaaaaatccagggggtatAGTTTTTAGAGTGTAAAAATACACTAA
TACAGCGTGCTCAGTAAAACGAagtcgaaaatccagggtggtcagtaaaa
cgaggttGAAAATCCGGGTTGGTCAAAAAAAGGATTTAACTTGATTTCTG
CACAATCAACTctcaatgggccattccattttatatccatacaggagGTG
GAGGAACTTTTTCCAGGGCCTAATCTGAAATGAACTTCCAGGGGAGATAA
AGGAgtgcttttttcatttattttagggggtaaaaagttattttaaaatt
tccaggtgtaaaaaaactgaattttgttCATCCatcctcactttaaggta
tgaaaagaatttttcaaagtgtctttttgcaaattttgccattttccaat
cAATTATTTTTGTTGACTTAAAAGGTTCGTCGTAAAATCAAGTTAAGCCC
AGTATAGTTCTGAGCACTTTTTTATAGTTATATAAATTATAAGCTcgttt
ctcataaaaaatttaCCTTACACTGTAACTTTATGAATTTATTATTATGG
GATAATCTAACTGAGAAATCTTCCATGTTGCATTAGTTTTGCTTAGTAAC
CCAATATCCTTGTCTGTCATCAGACTCTGTATCTAGATTTAACTTATTTG
AAAAAAGGATTTTCTACAAGTTTGTGTAGGTTTTTGTCGTCTCAAAATTA
CTCCTTCCTTGGTtcgatacaccttttcgaccgtagctgccaattaccac
gcgggcattttttttgtccgttttaccaccctaaaaccatcccagtcttt
tttcgcacatatagacaatagaaaaaggtgtcaaaaaaggattggatcga
gtttagggtgaaAAAGCtgtccgcgcggcaattggcagctatggtcgaaa
aggtgtattctgcATTTGTATTTTTGTTGATTGGCATTATTGTTTGAAGG
CTACAGCTTGTCAAGGATCGACTGCTCCTAttgttttttagcatttttaa
gctttttaagcttaaaattgttcttattctgttcttatTTGTTGGGAAAA
CTGAAGTATTTTAGTTATTTAAAACCCTTTGAATTCTGCacacttcttct
ttttttttataaaaagtaaatttttaatgagaCTCGGCTGTTCGTATTAC
TTTAtagcactttgagccttgaTTTGTTCTTATCCTGCTCTTATTTAGAc
ggcaaatttaaaaaaatttgggcTTTACTTCGAATTGCTTGAAAATTTAG
TAGTTCAAGGCTCGGCTCTTTGCATTGTAATTACCAATTTTGAGCCTTTT
gttctaaaattgttcttaaaaaagagtgtatataATTCTTTTTTACTTGG
CTTCACCTTTcgtatctttttcttttaagtGCTAAATACAAACAGAAAAG
GCGATGTCGATGAAGCACAGCAGATCACCAGATCCATTGGACGACACACC
TTACCTTATACCTCCACCTGGTAAGAATATTCCGTTTGTTTACAAAATCC
AGCCTTTCGTGATTATGTTAACACCATTTAGTTTGAGTTTGAAACTCTTG
GATTGGAAATAATGGATTCCGTCCAAAACGTGCGTCCTATGTgatttttg
cccccgcaggagcgtagcgacgaggaggcactcatagtttcacgcataga
tattggactggaatctctaaattttgttgcgcgtgtttgtttgttttgtc
gcccaagcatccccgtagttagtctcttccgtaaatgctcggttttcata
ttacgttatatggtattatcattatNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNgattattttttaatgtttaatcttttaaagcatta
aagctttataagtgcatgacatgatctttatgtgggggcatttagtgaaa
gctatgactagtcaTATAaatgccagattgaaagtaaaatccatccccag
atttcgaaaaatatgtagtgtgaaaacaaagaaagtgctagattTAATAC
GTCATCCCAAAAGCGATGTATAACCTTAAAGCTTCACTCTTTCTTGCTTA
AGAAAAGTTGAATAGATTCCTTTCTAaccctttgggctttaaactAAAAG
ATGTTAACACCATGCACTTAGAGCTTCAGATGAGCTAAAAGTGaagattt
tgccattttttatcaCAGCCCTCTGGGCAAGGGAAAAATTAAGATTTGTA
TTTTATCTTTTGCAATGGCTTGAAGCTCAAACCGCTAGTAAAGGTTTTGA
ATGGCTTTATTTTGAATTCACTGTTAACACTGGAGCATTTTGTCTTATGA
CATTATATTTCATGAGTCCACAAAGGCtgataaaaatgttcttataaaaa
cgttaATTCTTCATAGACGACGAGGCTCGAAAATGTGGTTGTAAGAACGA
AACATTTCGTCTGGCGATTGGCCTGGTGTTAGTTTTCATGATCGCTATCT
CATGGACAGGAGCTACACAGTTTGGTCGAAGTGTTTATGATGTCAATTTT
GATGCTCCTTACCTAACTGCATGGTTTGTCATGTGTTTTCAATGCGTCAT
TTTTCCACTGTCATTGCTTGCTTTCGTTGGGCGGAGAAAGAAGTTGCGTG
AATACTGGAAGTAAGAATAACTTTTCTTCAGATTCTCATCATGGTAATCT
GGaaatcgatgttttttcttcattGAAGTGAAAAAATTTACATAGCGTTG
GAGAATACATGATAGGCACAATTGCAATGTCTTTCACGGACACAACAACT
ggttggttgtaagtgacgtaaaatcagccGATTCGTCTTTTGCAAATAAA
ATTAGCTGTTGGGTATATATCGTATATATCGTGAATAGGTCATTTTTCCA
ATTATTCAAATGATTGCACATTGCAATTTCAAGCCTTCAGACAAGAAGTG
TTTTATCTTAAAGACTTCGGAACAAATTTATTAGCAACGATGAGAATCAT
TAATGTAAAGAAACACACTACACCGAATTGACGGATAAAATCTTTTATGC
CATATTCCATGATAATTTTGTTTCTTTCAGTAAATCAATGGAATTATTTG
GTCCAGATGGCTTAACACTTCGTGGTTTCCTCAAATTCGGGCTTATCTAT
GCGCTACCCCTAAACATCATTAGTATCTTGGCAAACTATTTGTTCTATCG
AGCACTGAAATCGTTGAATCCAAGCACAGTGGCGTCAATTTTCTCAGCTC
AAAGTGCTTTCGTTTATGCATTATCTATCATATTTCTAAAAGAGAAATTC
TTCTTTACACGTGTAAGTTCGGCGTTCCTATTAAATGGTACACAATCGTA
CAACatatttataaaaaagcgtCTTAACAAAAATCTATCTGGGAAGAGTT
TATGATATTTCGGTTTTTGTCAGTaataattttaacaatttttctttagc
ttaaatttcttgaatttgCCAACTACGTCATGATTATCATGAATTTTACA
TGGCTTTTTTCAGTCGTTTGAACAGCAGAAAATTAACTTCCCTACTTTAT
TTTCTAGCTAACTTCGGTGCTATTATCAGTTGGAGGTATTGTCTTAATGG
GACACGGTGAAGGCTTCCAGAATGCGTCGACTGTTGGAGTAATATTGACC
GCAATTGCTGCCTTGTGTGCTGCAATTTTTCAGGTGAGAACATTATAGTC
ATTACTTTGCTATCGTTAGGTACAcgtttgttttataagaacaaactNAT
TGTCATTACTTTGCTATTGTAGGGtacgtgttttttttataagaacaaac
tatataagaacataaggcttcgatggccaaaatattaagaacagcttaag
aacattttaaggctttctggACTCCAAAAGACCCTATTCCTtagaaaaat
tgggaaaaatacacaaaaatactcagaaatggcgataataagaacatgtt
aagaacatttttaggcataaaactcaaaaagttaagaacatccgaaggct
tcaaaaatattgaatgttcttataagaagAACGTGTATGAAGGATGATAA
TGtcaacaaaataataataatctgctttccaaatttgttttttcacttat
tCAGCGAAAACTTTACACCTAAAAGCAACGCTAGCTAGCGTTGTTGTAAA
ATTGAATAACACATTAAATTTGGTCTTTATGTCAATATACCATAATTCGA
ACACAACACATACATTTACTTTTAGCACGTTTTAAGGTTATGcctcaaac
aaaaaaataacgtGATCGGTGTAGAAaggggccgataaggtaatagATGA
CTATATTGTACTATTTTAATTTTCTCAATCCAAAGGTTGCATTCAAACGT
TCATTTGGTTTCCCGGCTACCGGACAAGTAGCAGTGATTGTCACCTACAT
TGGGTTGACCAATCTTGTCGTACTACCATACTTTATCTTCATATTCAAGC
ATGTTGGTTGGGAACATTTTATATGGAGTGCTTTACCATGGAAGCTTCTC
ATCGGTACTGCTCTATTAGGTCTCATGTTCAATTTCTTGTTAATTTTCGG
TGTCGCTTATACCTATCCGCTGTTCATATCTATTGGCAATCTGATTGGTG
TTCCCATGAATGCAGCCATAGATGCCATTTTCCGTGGAGAggattttgat
gcttttaagaTTGCAGCTTTCTTTATCATTGTAACCGGATTCATGCTGTT
GTTGATTCCTATATCAagaattgaatattttgaacGAGAAGTTTGCTGCA
AAAAATGTAGTAAAAGAAATGATGAAGAAGACCTTGAATGATTTAGagtt
tgtatttattttgaaattga Coding sequence (CDS) from alignment at sc0000133:163039..171958+ >TCONS_00011826 ID=TCONS_00011826|Name=TCONS_00011826|organism=Clytia hemisphaerica|type=CDS|length=5625bp|location=Sequence derived from alignment at sc0000133:163039..171958+ (Clytia hemisphaerica)
ATGTCGATGAAGCACAGCAGATCACCAGATCCATTGGACGACACACCTTA
CCTTATACCTCCACCTGACGACGAGGCTCGAAAATGTGGTTGTAAGAACG
AAACATTTCGTCTGGCGATTGGCCTGGTGTTAGTTTTCATGATCGCTATC
TCATGGACAGGAGCTACACAGTTTGGTCGAAGTGTTTATGATGTCAATTT
TGATGCTCCTTACCTAACTGCATGGTTTGTCATGTGTTTTCAATGCGTCA
TTTTTCCACTGTCATTGCTTGCTTTCGTTGGGCGGAGAAAGAAGTTGCGT
GAATACTGGAATAAATCAATGGAATTATTTGGTCCAGATGGCTTAACACT
TCGTGGTTTCCTCAAATTCGGGCTTATCTATGCGCTACCCCTAAACATCA
TTAGTATCTTGGCAAACTATTTGTTCTATCGAGCACTGAAATCGTTGAAT
CCAAGCACAGTGGCGTCAATTTTCTCAGCTCAAAGTGCTTTCGTTTATGC
ATTATCTATCATATTTCTAAAAGAGAAATTCTTCTTTACACGTCTAACTT
CGGTGCTATTATCAGTTGGAGGTATTGTCTTAATGGGACACGGTGAAGGC
TTCCAGAATGCGTCGACTGTTGGAGTAATATTGACCGCAATTGCTGCCTT
GTGTGCTGCAATTTTTCAGGTTGCATTCAAACGTTCATTTGGTTTCCCGG
CTACCGGACAAGTAGCAGTGATTGTCACCTACATTGGGTTGACCAATCTT
GTCGTACTACCATACTTTATCTTCATATTCAAGCATGTTGGTTGGGAACA
TTTTATATGGAGTGCTTTACCATGGAAGCTTCTCATCGGTACTGCTCTAT
TAGGTCTCATGTTCAATTTCTTGTTAATTTTCGGTGTCGCTTATACCTAT
CCGCTGTTCATATCTATTGGCAATCTGATTGGTGTTCCCATGAATGCAGC
CATAGATGCCATTTTCCGTGGAGAggattttgatgcttttaagaTTGCAG
CTTTCTTTATCATTGTAACCGGATTCATGCTGTTGTTGATTCCTATATCA
agaattgaatattttgaacGAGAAGTTTGCTGCAAAAAATGTAGTAAAAG
AAATGATGAAGAAGACCTTGAATGAATGTCGATGAAGCACAGCAGATCAC
CAGATCCATTGGACGACACACCTTACCTTATACCTCCACCTGACGACGAG
GCTCGAAAATGTGGTTGTAAGAACGAAACATTTCGTCTGGCGATTGGCCT
GGTGTTAGTTTTCATGATCGCTATCTCATGGACAGGAGCTACACAGTTTG
GTCGAAGTGTTTATGATGTCAATTTTGATGCTCCTTACCTAACTGCATGG
TTTGTCATGTGTTTTCAATGCGTCATTTTTCCACTGTCATTGCTTGCTTT
CGTTGGGCGGAGAAAGAAGTTGCGTGAATACTGGAATAAATCAATGGAAT
TATTTGGTCCAGATGGCTTAACACTTCGTGGTTTCCTCAAATTCGGGCTT
ATCTATGCGCTACCCCTAAACATCATTAGTATCTTGGCAAACTATTTGTT
CTATCGAGCACTGAAATCGTTGAATCCAAGCACAGTGGCGTCAATTTTCT
CAGCTCAAAGTGCTTTCGTTTATGCATTATCTATCATATTTCTAAAAGAG
AAATTCTTCTTTACACGTCTAACTTCGGTGCTATTATCAGTTGGAGGTAT
TGTCTTAATGGGACACGGTGAAGGCTTCCAGAATGCGTCGACTGTTGGAG
TAATATTGACCGCAATTGCTGCCTTGTGTGCTGCAATTTTTCAGGTTGCA
TTCAAACGTTCATTTGGTTTCCCGGCTACCGGACAAGTAGCAGTGATTGT
CACCTACATTGGGTTGACCAATCTTGTCGTACTACCATACTTTATCTTCA
TATTCAAGCATGTTGGTTGGGAACATTTTATATGGAGTGCTTTACCATGG
AAGCTTCTCATCGGTACTGCTCTATTAGGTCTCATGTTCAATTTCTTGTT
AATTTTCGGTGTCGCTTATACCTATCCGCTGTTCATATCTATTGGCAATC
TGATTGGTGTTCCCATGAATGCAGCCATAGATGCCATTTTCCGTGGAGAg
gattttgatgcttttaagaTTGCAGCTTTCTTTATCATTGTAACCGGATT
CATGCTGTTGTTGATTCCTATATCAagaattgaatattttgaacGAGAAG
TTTGCTGCAAAAAATGTAGTAAAAGAAATGATGAAGAAGACCTTGAATGA
ATGTCGATGAAGCACAGCAGATCACCAGATCCATTGGACGACACACCTTA
CCTTATACCTCCACCTGACGACGAGGCTCGAAAATGTGGTTGTAAGAACG
AAACATTTCGTCTGGCGATTGGCCTGGTGTTAGTTTTCATGATCGCTATC
TCATGGACAGGAGCTACACAGTTTGGTCGAAGTGTTTATGATGTCAATTT
TGATGCTCCTTACCTAACTGCATGGTTTGTCATGTGTTTTCAATGCGTCA
TTTTTCCACTGTCATTGCTTGCTTTCGTTGGGCGGAGAAAGAAGTTGCGT
GAATACTGGAATAAATCAATGGAATTATTTGGTCCAGATGGCTTAACACT
TCGTGGTTTCCTCAAATTCGGGCTTATCTATGCGCTACCCCTAAACATCA
TTAGTATCTTGGCAAACTATTTGTTCTATCGAGCACTGAAATCGTTGAAT
CCAAGCACAGTGGCGTCAATTTTCTCAGCTCAAAGTGCTTTCGTTTATGC
ATTATCTATCATATTTCTAAAAGAGAAATTCTTCTTTACACGTCTAACTT
CGGTGCTATTATCAGTTGGAGGTATTGTCTTAATGGGACACGGTGAAGGC
TTCCAGAATGCGTCGACTGTTGGAGTAATATTGACCGCAATTGCTGCCTT
GTGTGCTGCAATTTTTCAGGTTGCATTCAAACGTTCATTTGGTTTCCCGG
CTACCGGACAAGTAGCAGTGATTGTCACCTACATTGGGTTGACCAATCTT
GTCGTACTACCATACTTTATCTTCATATTCAAGCATGTTGGTTGGGAACA
TTTTATATGGAGTGCTTTACCATGGAAGCTTCTCATCGGTACTGCTCTAT
TAGGTCTCATGTTCAATTTCTTGTTAATTTTCGGTGTCGCTTATACCTAT
CCGCTGTTCATATCTATTGGCAATCTGATTGGTGTTCCCATGAATGCAGC
CATAGATGCCATTTTCCGTGGAGAggattttgatgcttttaagaTTGCAG
CTTTCTTTATCATTGTAACCGGATTCATGCTGTTGTTGATTCCTATATCA
agaattgaatattttgaacGAGAAGTTTGCTGCAAAAAATGTAGTAAAAG
AAATGATGAAGAAGACCTTGAATGAATGTCGATGAAGCACAGCAGATCAC
CAGATCCATTGGACGACACACCTTACCTTATACCTCCACCTGACGACGAG
GCTCGAAAATGTGGTTGTAAGAACGAAACATTTCGTCTGGCGATTGGCCT
GGTGTTAGTTTTCATGATCGCTATCTCATGGACAGGAGCTACACAGTTTG
GTCGAAGTGTTTATGATGTCAATTTTGATGCTCCTTACCTAACTGCATGG
TTTGTCATGTGTTTTCAATGCGTCATTTTTCCACTGTCATTGCTTGCTTT
CGTTGGGCGGAGAAAGAAGTTGCGTGAATACTGGAATAAATCAATGGAAT
TATTTGGTCCAGATGGCTTAACACTTCGTGGTTTCCTCAAATTCGGGCTT
ATCTATGCGCTACCCCTAAACATCATTAGTATCTTGGCAAACTATTTGTT
CTATCGAGCACTGAAATCGTTGAATCCAAGCACAGTGGCGTCAATTTTCT
CAGCTCAAAGTGCTTTCGTTTATGCATTATCTATCATATTTCTAAAAGAG
AAATTCTTCTTTACACGTCTAACTTCGGTGCTATTATCAGTTGGAGGTAT
TGTCTTAATGGGACACGGTGAAGGCTTCCAGAATGCGTCGACTGTTGGAG
TAATATTGACCGCAATTGCTGCCTTGTGTGCTGCAATTTTTCAGGTTGCA
TTCAAACGTTCATTTGGTTTCCCGGCTACCGGACAAGTAGCAGTGATTGT
CACCTACATTGGGTTGACCAATCTTGTCGTACTACCATACTTTATCTTCA
TATTCAAGCATGTTGGTTGGGAACATTTTATATGGAGTGCTTTACCATGG
AAGCTTCTCATCGGTACTGCTCTATTAGGTCTCATGTTCAATTTCTTGTT
AATTTTCGGTGTCGCTTATACCTATCCGCTGTTCATATCTATTGGCAATC
TGATTGGTGTTCCCATGAATGCAGCCATAGATGCCATTTTCCGTGGAGAg
gattttgatgcttttaagaTTGCAGCTTTCTTTATCATTGTAACCGGATT
CATGCTGTTGTTGATTCCTATATCAagaattgaatattttgaacGAGAAG
TTTGCTGCAAAAAATGTAGTAAAAGAAATGATGAAGAAGACCTTGAATGA
ATGTCGATGAAGCACAGCAGATCACCAGATCCATTGGACGACACACCTTA
CCTTATACCTCCACCTGACGACGAGGCTCGAAAATGTGGTTGTAAGAACG
AAACATTTCGTCTGGCGATTGGCCTGGTGTTAGTTTTCATGATCGCTATC
TCATGGACAGGAGCTACACAGTTTGGTCGAAGTGTTTATGATGTCAATTT
TGATGCTCCTTACCTAACTGCATGGTTTGTCATGTGTTTTCAATGCGTCA
TTTTTCCACTGTCATTGCTTGCTTTCGTTGGGCGGAGAAAGAAGTTGCGT
GAATACTGGAATAAATCAATGGAATTATTTGGTCCAGATGGCTTAACACT
TCGTGGTTTCCTCAAATTCGGGCTTATCTATGCGCTACCCCTAAACATCA
TTAGTATCTTGGCAAACTATTTGTTCTATCGAGCACTGAAATCGTTGAAT
CCAAGCACAGTGGCGTCAATTTTCTCAGCTCAAAGTGCTTTCGTTTATGC
ATTATCTATCATATTTCTAAAAGAGAAATTCTTCTTTACACGTCTAACTT
CGGTGCTATTATCAGTTGGAGGTATTGTCTTAATGGGACACGGTGAAGGC
TTCCAGAATGCGTCGACTGTTGGAGTAATATTGACCGCAATTGCTGCCTT
GTGTGCTGCAATTTTTCAGGTTGCATTCAAACGTTCATTTGGTTTCCCGG
CTACCGGACAAGTAGCAGTGATTGTCACCTACATTGGGTTGACCAATCTT
GTCGTACTACCATACTTTATCTTCATATTCAAGCATGTTGGTTGGGAACA
TTTTATATGGAGTGCTTTACCATGGAAGCTTCTCATCGGTACTGCTCTAT
TAGGTCTCATGTTCAATTTCTTGTTAATTTTCGGTGTCGCTTATACCTAT
CCGCTGTTCATATCTATTGGCAATCTGATTGGTGTTCCCATGAATGCAGC
CATAGATGCCATTTTCCGTGGAGAggattttgatgcttttaagaTTGCAG
CTTTCTTTATCATTGTAACCGGATTCATGCTGTTGTTGATTCCTATATCA
agaattgaatattttgaacGAGAAGTTTGCTGCAAAAAATGTAGTAAAAG
AAATGATGAAGAAGACCTTGAATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00011826-exon-sc0000133-1491911889:163039..163169 | TCONS_00011826-exon-sc0000133-1491911889:163039..163169 | Clytia hemisphaerica | exon |
| TCONS_00011826-exon-sc0000133-1510915933:163039..163169 | TCONS_00011826-exon-sc0000133-1510915933:163039..163169 | Clytia hemisphaerica | exon |
| TCONS_00011826-exon-sc0000133-1575043694:163039..163169 | TCONS_00011826-exon-sc0000133-1575043694:163039..163169 | Clytia hemisphaerica | exon |
| TCONS_00011826-exon-sc0000133-1491911889:167168..167258 | TCONS_00011826-exon-sc0000133-1491911889:167168..167258 | Clytia hemisphaerica | exon |
| TCONS_00011826-exon-sc0000133-1510915933:167168..167258 | TCONS_00011826-exon-sc0000133-1510915933:167168..167258 | Clytia hemisphaerica | exon |
| TCONS_00011826-exon-sc0000133-1575043694:167168..167258 | TCONS_00011826-exon-sc0000133-1575043694:167168..167258 | Clytia hemisphaerica | exon |
| TCONS_00011826-exon-sc0000133-1491911889:169555..169798 | TCONS_00011826-exon-sc0000133-1491911889:169555..169798 | Clytia hemisphaerica | exon |
| TCONS_00011826-exon-sc0000133-1510915933:169555..169798 | TCONS_00011826-exon-sc0000133-1510915933:169555..169798 | Clytia hemisphaerica | exon |
| TCONS_00011826-exon-sc0000133-1575043694:169555..169798 | TCONS_00011826-exon-sc0000133-1575043694:169555..169798 | Clytia hemisphaerica | exon |
| TCONS_00011826-exon-sc0000133-1491911889:170219..170450 | TCONS_00011826-exon-sc0000133-1491911889:170219..170450 | Clytia hemisphaerica | exon |
| TCONS_00011826-exon-sc0000133-1510915933:170219..170450 | TCONS_00011826-exon-sc0000133-1510915933:170219..170450 | Clytia hemisphaerica | exon |
| TCONS_00011826-exon-sc0000133-1575043694:170219..170450 | TCONS_00011826-exon-sc0000133-1575043694:170219..170450 | Clytia hemisphaerica | exon |
| TCONS_00011826-exon-sc0000133-1491911889:170696..170821 | TCONS_00011826-exon-sc0000133-1491911889:170696..170821 | Clytia hemisphaerica | exon |
| TCONS_00011826-exon-sc0000133-1510915933:170696..170821 | TCONS_00011826-exon-sc0000133-1510915933:170696..170821 | Clytia hemisphaerica | exon |
| TCONS_00011826-exon-sc0000133-1575043694:170696..170821 | TCONS_00011826-exon-sc0000133-1575043694:170696..170821 | Clytia hemisphaerica | exon |
| TCONS_00011826-exon-sc0000133-1491911889:171474..171958 | TCONS_00011826-exon-sc0000133-1491911889:171474..171958 | Clytia hemisphaerica | exon |
| TCONS_00011826-exon-sc0000133-1510915933:171474..171958 | TCONS_00011826-exon-sc0000133-1510915933:171474..171958 | Clytia hemisphaerica | exon |
| TCONS_00011826-exon-sc0000133-1575043694:171474..171958 | TCONS_00011826-exon-sc0000133-1575043694:171474..171958 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000133 | supercontig | sc0000133:163039..171958 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR000620 | EamA_dom |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
| GO:0016020 | membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| cellular_component |
GO:0016021 |
integral component of membrane |
| cellular_component |
GO:0016020 |
membrane |
Blast
BLAST of TCONS_00011826 vs. Swiss-Prot (Human)
Match: S35F3 (Putative thiamine transporter SLC35F3 OS=Homo sapiens GN=SLC35F3 PE=2 SV=2) HSP 1 Score: 157.918 bits (398), Expect = 7.644e-43 Identity = 96/321 (29.91%), Postives = 174/321 (54.21%), Query Frame = 3
Query: 177 SPDPLD-DTPYLIPPPDDEARKC--GCKNETFRLAIGLVLVFMIAISWTGATQFGRSVYDVNFDAPYLTAWFVMCFQCVIFPLSLLAFVGR---RKKLREYWNKSMELFGPDGLTLRGFLKFGLIYALPLNIISILANYLFYRALKSLNPSTVASIFSAQSAFVYALSIIFLKEKFFFTRLTSVLLSVGGIVLMGHGEGFQNASTVGVXXXXXXXXXXXXFQVAFKRSFGFPATGQVAVIVTYIGLTNLV---VLPYFIFIFKHVGWEHFIWSALPWKLLIGTALLGLMFNFLLIFGVAYTYPLFISIGNLIGVPMNAAID 1112
SP P + P + +R+C + + ++ G+ +V + SW G+TQ + + FDAP+ WF + + FPL + V + ++ +++ + + FG +GLTL+ F A P ++ L NYL+ A+K +N + V+ +F AFV+ LS I L+++F R+ + +L++ GIV+M + +GF + S +G+ L +A +A+++V FK G G+ A+ ++ +G+ N++ +P ++ K W F +PW L G ++L L FN +L FG+A TYP +S+G ++ +P+NA ID
Sbjct: 33 SPGPAEAQAPAGVEAGGRASRRCWTCSRAQLKKIFWGVAVVLCVCSSWAGSTQLAKLTFR-KFDAPFTLTWFATNWNFLFFPLYYVGHVCKSTEKQSVKQRYRECCRFFGDNGLTLKVFF----TKAAPFGVLWTLTNYLYLHAIKKINTTDVSVLFCCNKAFVFLLSWIVLRDRFMGVRIVAAILAIAGIVMMTYADGFHSHSVIGIALVVASASMSALYKVLFKLLLGSAKFGEAALFLSILGVFNILFITCIPIILYFTKVEYWSSF--DDIPWGNLCGFSVLLLTFNIVLNFGIAVTYPTLMSLGIVLSIPVNAVID 346
The following BLAST results are available for this feature:
|
