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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00011845 ID=TCONS_00011845|Name=TCONS_00011845|organism=Clytia hemisphaerica|type=transcript|length=323bp
GTTGAGAACTCTGGTTAATGATGTTGTTGAAAAAGACTTTGGCCCACAAA
TCATGAAAAGCACCAAGGACACAGTGAAAGCTGCTTCTGGACAATCTGCT
GAGAATCGTCGACCAATCTGGCTAAGCTCAAAAAGAAACTCGAAAAGAAG
AGAGCCAACGACAACATTGTACTCAAGAAAACCGGCCATCAAGATCAATT
TGCTCATAACACAGCAGTCTTGGAAACGATTGAGGATACCCTCGAATTCA
TGGAAGAGACGGATGTTGATGGGACGAAAGAAGCTTTGAATAAAGCatca
tttttctttccttttatgTTGAC Run BLAST on NCBI transcript from alignment at sc0000133:559641..560756+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00011845 ID=TCONS_00011845|Name=TCONS_00011845|organism=Clytia hemisphaerica|type=transcript|length=1116bp|location=Sequence derived from alignment at sc0000133:559641..560756+ (Clytia hemisphaerica)
GTTGAGAACTCTGGTTAATGATGTTGTTGAAAAAGACTTTGGCCCACAAA
TCATGAAAAGCACCAAGGACACAGTGAAAGCTGCTTCTGGACAATCTGCT
GAGAATCGTCGACCAATCTGGCTAAGCTCAAAAAGAAACTCGAAAAGAAG
AGAGCCAACGACAACATTGTACTCAAGAAAACCGGCCATCAAGATCAATT
TGCTCATAACACAGCAGTCTTGGAAACGATTGAGGATACCCTCGAATTCA
TGGAAGAGACGGATGTTGATGGGACGAAAGAAGCTTTGAATAAAGGTAAg
agattatttatttattagagACTCGTATACAACATATTAGAATCGCCGTC
ACACATGGGTGGCTTACTGTTAACGAACTTAAGGCAAGCGATCTTACATC
TGGAGACGTGGAGGAAAATAGGCTTAAGAGGGCTATTAAAAATGCAGAGC
AAGTTAAACAAcgtatttataaaaaaaacaagaatagACGAACCTGATGG
AGAATACTCCAAGGCAATCAAATCTAGAACTGAACAAAGGAGCAGTATGG
AGGAGGTGGTTTGTTATTCATGCAATGAATGAAAGAGTATGGCACTACGT
CAGCCACTGTcctttttctgaattttcttcaCCTTTGGCCTACTCGACAA
AATTAATGTCCTCATCAACAGCAACTAAAAGTTCGTCGTCCAATTCAAGT
TCTAAATTGTCAAGGGATGGAAAGTAActttaacaaaaaatatataagat
TTTCAGACATTCAGAACaagttttcaacttttgaaatacagtagCTATTT
TACGTTGCGttagttttaaaatttgattACAATTGTTGTAATTTGTTGTA
ATTAGATTAGTATTAATGAGAGCTCATGATATAAATGTACCTGATCTTCT
ATTCTATTTCAACTATTTCAACTGTGCCATTTTACCTTCTTAAATAATAA
ATGTCAAAATTAGACGATGCAACAAATTATCAAAACTTCTCTCCTTTGTG
AGAATGCTTTTAGCACTTGACCCTTATTATATCAATTATTCTAACACAAA
ATGTATAATTGACAAATTTGCAGGCTTCTATTATGTAGCatcatttttct
ttccttttatgTTGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00011845-exon-sc0000133-1491911889:559641..559935 | TCONS_00011845-exon-sc0000133-1491911889:559641..559935 | Clytia hemisphaerica | exon |
| TCONS_00011845-exon-sc0000133-1510915933:559641..559935 | TCONS_00011845-exon-sc0000133-1510915933:559641..559935 | Clytia hemisphaerica | exon |
| TCONS_00011845-exon-sc0000133-1575043694:559641..559935 | TCONS_00011845-exon-sc0000133-1575043694:559641..559935 | Clytia hemisphaerica | exon |
| TCONS_00011845-exon-sc0000133-1491911889:560729..560756 | TCONS_00011845-exon-sc0000133-1491911889:560729..560756 | Clytia hemisphaerica | exon |
| TCONS_00011845-exon-sc0000133-1510915933:560729..560756 | TCONS_00011845-exon-sc0000133-1510915933:560729..560756 | Clytia hemisphaerica | exon |
| TCONS_00011845-exon-sc0000133-1575043694:560729..560756 | TCONS_00011845-exon-sc0000133-1575043694:560729..560756 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000133 | supercontig | sc0000133:559641..560756 + |
Blast
The following BLAST results are available for this feature:
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