TCONS_00011888 (transcript) - C. hemisphaerica

Overview
NameTCONS_00011888
Unique NameTCONS_00011888
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length131

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00011888 ID=TCONS_00011888|Name=TCONS_00011888|organism=Clytia hemisphaerica|type=transcript|length=131bp
TCCACTTAGAAAAATatccttgttcttataaaattcttataaactaaTGT
TAGATTTAGGAAAATTGCCTATTTCTTTCGATAGAGCCGTTGCAAAATGC
CAAttccacttagaaaaaaatttaaatttgt
Run BLAST on NCBI

transcript from alignment at sc0000133:13641..13771

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00011888 ID=TCONS_00011888|Name=TCONS_00011888|organism=Clytia hemisphaerica|type=transcript|length=131bp|location=Sequence derived from alignment at sc0000133:13641..13771 (Clytia hemisphaerica)
acaaatttaaatttttttctaagtggaaTTGGCATTTTGCAACGGCTCTA
TCGAAAGAAATAGGCAATTTTCCTAAATCTAACAttagtttataagaatt
ttataagaacaaggatATTTTTCTAAGTGGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006673XLOC_006673Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011888-exon-sc0000133-1491911889:13641..13771TCONS_00011888-exon-sc0000133-1491911889:13641..13771Clytia hemisphaericaexon
TCONS_00011888-exon-sc0000133-1510915933:13641..13771TCONS_00011888-exon-sc0000133-1510915933:13641..13771Clytia hemisphaericaexon
TCONS_00011888-exon-sc0000133-1575043694:13641..13771TCONS_00011888-exon-sc0000133-1575043694:13641..13771Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000133supercontigsc0000133:13641..13771 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00011888 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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