|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00011904 ID=TCONS_00011904|Name=TCONS_00011904|organism=Clytia hemisphaerica|type=transcript|length=1393bp
TCTAGATATGAATGTTGCTTATTTCGTCggattttttaatccaaatactT
TCACAACCACATTCAATTCATCGATGTTTTTATCTGGATGTTATTTTATG
ATATATAGCCCTGGTACTCACTGGCTTAACTGTCAGTTTACTACAAATGT
CCCGTGAAGGCATTGATCATACAGAAGGAACGTTTGAAGACCGCATTCCA
TCAAATGGCTTTTTGGAACTCCATTTTATTACATAGATTGGACTTTTAAA
GAAAGGATTTACAATTGACTGCGTCCATCAATTTGAACTTGTCAAGTTGA
TCTTCTTTGTGCGTCTTAGTCTCAAACGATGATTTCTTTGTCGGTCTTTC
TTTTGTAGGAGGAGTTGGGATCGAGCATTTCTCTACTGACGGAGGTTGGA
CGGGTCGCAATTTTTCACGTTCCCCTTTCTTTTCGAAGAAACCAACGGGC
CAGTGTTTTTCGTAGAACATGAACTACCATCGCTTCGATTTCATCCCTCC
CAAAACGGAATTGATTTGATACACTTGCATGCTTCGCTTTTTTCGGAAAG
CTGTAGGTTTTCATAATGTTCCTCTGATGGTTCCAAATTTCTTCTCTTCA
TTACTAAGACTGTTTATGGTTCGACAGCCTTTTGATAAcgcacttttttt
gaaaattatgaaaattccGTGGCCTTCGTAAAATCGCCGCGGATACATGT
TTACTAGGCCTGTATTTTAGAACGCCATGCGCCCAATTCAATATcgatta
tatttaaaaaagaaacacaaaaattgaatgtttttcttttctctgaTTGA
CTATTTCAGATAAAAAAGAATATACTATCGTGGCcagaatactttaggcg
tacaaatttTCGTGAGGTCAAAAAATCtcgaaatttacgacatttacttt
ctcGAATTTGACGAAGAAATgtttttcgcaagcataaatTTTCCCAAATC
AAGGCTTAAACAGGCTAAAAAGCGCCATAAATCTTCTACATTGTGTgggg
tatttcggaattgcggaaatcgagctattttcttcagaatttcggaaatc
gggcatAATTTCTTCGGTATTTTGGAATTCCGAagttgtttcggtatcgg
aaatccatgaatttttgtttcgaaatttcgatatcataaagtttttatcc
ccctttttcggaattcatacgtgaaaaaaatatttgatgaaaaaatagaG
TTGAGTTTCGAGGAACATATCTCTAAGCAAGTCAACAAGGCCAATTTGAT
GCTTGGAGTTATTAACCGTGACTTCCAAAACCTTAGCCCACAGATTTTTC
TTACTCTGTACTGTACTTTCGTTCGAACGCATCTTGAATATGCACAATCA
GTCTGGTCACCGAAACTAAGGAAACACGCCAACCTATTGGAAG Run BLAST on NCBI transcript from alignment at sc0000133:307776..309168 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00011904 ID=TCONS_00011904|Name=TCONS_00011904|organism=Clytia hemisphaerica|type=transcript|length=1393bp|location=Sequence derived from alignment at sc0000133:307776..309168 (Clytia hemisphaerica)
CTTCCAATAGGTTGGCGTGTTTCCTTAGTTTCGGTGACCAGACTGATTGT
GCATATTCAAGATGCGTTCGAACGAAAGTACAGTACAGAGTAAGAAAAAT
CTGTGGGCTAAGGTTTTGGAAGTCACGGTTAATAACTCCAAGCATCAAAT
TGGCCTTGTTGACTTGCTTAGAGATATGTTCCTCGAAACTCAACtctatt
ttttcatcaaatatttttttcacgtatgaattccgaaaaagggggataaa
aactttatgatatcgaaatttcgaaacaaaaattcatggatttccgatac
cgaaacaactTCGGAATTCCAAAATACCGAAGAAATTatgcccgatttcc
gaaattctgaagaaaatagctcgatttccgcaattccgaaataccccACA
CAATGTAGAAGATTTATGGCGCTTTTTAGCCTGTTTAAGCCTTGATTTGG
GAAAatttatgcttgcgaaaaacATTTCTTCGTCAAATTCgagaaagtaa
atgtcgtaaatttcgaGATTTTTTGACCTCACGAaaatttgtacgcctaa
agtattctgGCCACGATAGTATATTCTTTTTTATCTGAAATAGTCAAtca
gagaaaagaaaaacattcaatttttgtgtttcttttttaaatataatcgA
TATTGAATTGGGCGCATGGCGTTCTAAAATACAGGCCTAGTAAACATGTA
TCCGCGGCGATTTTACGAAGGCCACggaattttcataattttcaaaaaaa
gtgcgTTATCAAAAGGCTGTCGAACCATAAACAGTCTTAGTAATGAAGAG
AAGAAATTTGGAACCATCAGAGGAACATTATGAAAACCTACAGCTTTCCG
AAAAAAGCGAAGCATGCAAGTGTATCAAATCAATTCCGTTTTGGGAGGGA
TGAAATCGAAGCGATGGTAGTTCATGTTCTACGAAAAACACTGGCCCGTT
GGTTTCTTCGAAAAGAAAGGGGAACGTGAAAAATTGCGACCCGTCCAACC
TCCGTCAGTAGAGAAATGCTCGATCCCAACTCCTCCTACAAAAGAAAGAC
CGACAAAGAAATCATCGTTTGAGACTAAGACGCACAAAGAAGATCAACTT
GACAAGTTCAAATTGATGGACGCAGTCAATTGTAAATCCTTTCTTTAAAA
GTCCAATCTATGTAATAAAATGGAGTTCCAAAAAGCCATTTGATGGAATG
CGGTCTTCAAACGTTCCTTCTGTATGATCAATGCCTTCACGGGACATTTG
TAGTAAACTGACAGTTAAGCCAGTGAGTACCAGGGCTATATATCATAAAA
TAACATCCAGATAAAAACATCGATGAATTGAATGTGGTTGTGAAagtatt
tggattaaaaaatccGACGAAATAAGCAACATTCATATCTAGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00011904-exon-sc0000133-1491911889:307776..309168 | TCONS_00011904-exon-sc0000133-1491911889:307776..309168 | Clytia hemisphaerica | exon |
| TCONS_00011904-exon-sc0000133-1510915933:307776..309168 | TCONS_00011904-exon-sc0000133-1510915933:307776..309168 | Clytia hemisphaerica | exon |
| TCONS_00011904-exon-sc0000133-1575043694:307776..309168 | TCONS_00011904-exon-sc0000133-1575043694:307776..309168 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000133 | supercontig | sc0000133:307776..309168 . |
Blast
The following BLAST results are available for this feature:
|
